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CAS No. : | 871329-82-7 | MDL No. : | MFCD07363778 |
Formula : | C6H6BFO3 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | RMBFBZIEXCTPDB-UHFFFAOYSA-N |
M.W : | 155.92 | Pubchem ID : | 44717308 |
Synonyms : |
|
Num. heavy atoms : | 11 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.0 |
Num. rotatable bonds : | 1 |
Num. H-bond acceptors : | 4.0 |
Num. H-bond donors : | 3.0 |
Molar Refractivity : | 38.25 |
TPSA : | 60.69 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | Yes |
Log Kp (skin permeation) : | -6.85 cm/s |
Log Po/w (iLOGP) : | 0.0 |
Log Po/w (XLOGP3) : | 0.57 |
Log Po/w (WLOGP) : | -0.37 |
Log Po/w (MLOGP) : | 0.09 |
Log Po/w (SILICOS-IT) : | -0.77 |
Consensus Log Po/w : | -0.1 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.5 |
Solubility : | 4.89 mg/ml ; 0.0314 mol/l |
Class : | Very soluble |
Log S (Ali) : | -1.42 |
Solubility : | 5.97 mg/ml ; 0.0383 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -0.98 |
Solubility : | 16.4 mg/ml ; 0.105 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 1.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.85 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H332-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
430 mg | With boron tribromide In dichloromethane at 0 - 20℃; for 3 h; Inert atmosphere | To a stuffed solution of (3-fluoro-5-methoxy-phenyl)boronic acid (500 mg, 2.942 mmol) in DCM (15 mL) was added 1 M solution of boron tribromide in DCM (14.7 mL, 14.7 mmol) under nitrogen atmosphere at 0 °C. The reaction mixture was stirred at RT for 3h. The reaction was monitored by TLC. After completion of reaction, the mixture was concentrated under reduced pressure. Water (15 mL) was added to the residue and the pH of the mixture was adjusted to 2 by the addition of 1M HC1 (aq.). The product was extracted with EtOAc (2x25 mL). The combined organic layer was dried over anhydrous sodium sulfate and concentrated under reduced pressure to afford (3-fluoro-5-hydroxy-phenyl)boronic acid (430 mg) as an off-white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With potassium carbonate;tetrakis(triphenylphosphine) palladium(0); In 1,4-dioxane; water; at 100℃; for 6h; | Intermediate 18: N-[2-(3,5-Dimethyl-pyrazol-l-ylV6-(3-fluoro-5-hydroxy-phenyl)- p yrimidin-4- yl] -acetamide; To a solution of Intermediate 2 (5.7 mmol, 1.5 g) in dioxane (30 mL) and water (3 mL) was added <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (8.5 mmol, 1.3 g) and potassium carbonate (6.8 mmol, 950 mg). The solution was degassed with nitrogen for 5 minutes. Tetrakis(triphenylphosphine)palladium(0) (0.06 mmol, 60 mg) was added and the mixture was heated at 100 0C for 6 hours. Once cool, the reaction was diluted with water and filtered. The solid filter cake was triturated with ether (100 mL) to yield the title compound (1.7 g, 87percent) as a light brown solid. LCMS (Method 3) m/z 341.8 [MH+], Tr = 2.57 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
31% | With cesium fluoride;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In 1,2-dimethoxyethane; water;Reflux; | Example 1533-(4-amino-1-((1-phenyl-1H-benzo[d]imidazol-2-yl)methyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluorophenol 153A mixture of 3-iodo-1-((1-phenyl-1H-benzo[d]imidazol-2-yl)methyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine 141 (1.0 g, 2.14 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (0.4 g, 2.56 mmol), Pd(dppf)Cl2 (0.2 g) and CsF (0.65 g, 4.3 mmol) in DME (20 mL) and H2O (2 mL) was refluxed overnight. Then the mixture was cooled to room temperature, added H2O (50 mL) and extracted with EtOAc (20 mL.x.3). The combined organic layers were washed with brine, dried over Na2SO4 and then concentrated in vacuo. The residue was treated with CH2Cl2 and filtered to give 153 (300 mg, yield 31percent) as a grey solid. LCMS (ESI), M+H+=450.16. 1HNMR (400 MHz, DMSO) delta 5.795 (s, 2H), 6.606-6.633 (d, J=10.8 Hz, 1H), 6.720-6.724 (d, J=8.8 Hz, 1H), 6.800 (s, 2H), 7.065-7.083 (d, J=7.2 Hz, 1H), 7.213-7.260 (m, 2H), 7.400 (s, 5H), 7.657-7.676 (d, J=7.6 Hz, 1H), 8.119 (s, 1H), 10.139 (s, 1H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With tetrakis(triphenylphosphine) palladium(0); sodium hydrogencarbonate; In 1,4-dioxane; water; for 2h;Reflux; | Sat. aq. NaHCOs soln (183 mL) was added to a soln of 95 (17.2 g, 65.2 mmol), 3- fluoro-5-hydroxyphenylboronic acid (96; 15.3 g, 97.9 mmol) and Pd(PPhs)4 (3.77 g, 3.26 mmol) in dioxane (517 mL). The mixture was heated to reflux for 2 h. Aqueous workup (EtOAc, sat. aq. Na2C03 soln, sat. aq. NaCI soln; Na2S04) and FC (hexane/EtOAc 90:10) afforded 97 (12.55 g, 65percent). |
65% | With tetrakis(triphenylphosphine) palladium(0); sodium hydrogencarbonate; In 1,4-dioxane; water; for 2h;Reflux; | Sat. aq. NaHCO3 soln (183 mE) was added to a soln of 95 (17.2 g, 65.2 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (96; 15.3 g, 97.9 mmol) and Pd(PPh3)4 (3.77 g, 3.26 mmol) in dioxane (517 mE). The mixture was heated to reflux for 2 h. Aqueous workup (EtOAc, sat. aq. Na2CO3 soln, sat. aq. NaC1 soln; Na2 SO4) and FC (hexane/EtOAc 90:10) afforded 97 (12.55 g, 65percent). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In 1,4-dioxane; water; at 100℃;Inert atmosphere; | General procedure: 2-((4-Amino-3-iodo-1 - -pyrazolo[3,4-d]pyrimidin-1 -yl)methyl)-5-methyl-3-(o- tolyl)pyrrolo[2,1-f][1 ,2,4]triazin-4(3H)-one (0.508 g, 0.99 mmol) was dissolved in 25 ml dioxane. (3-Fluoro-5-hydroxyphenyl)boronic acid (0.232 g, 1 .49 mmol), 1 ,1'- bis(diphenylphosphino)ferrocene-palladium(ll)dichloride dichloromethane complex (0.081 g, 0.10 mmol) and a solution of sodium carbonate (2M, 1.50 mL, 3 mmol) were added. The mixture was submitted to three vacuum-argon cycles and was then stirred at 100°C overnight. The solvent was concentrated and the residue was partitioned between ethyl acetate and water. The organic phase was washed sequentially with water and brine, dried over sodium sulphate, filtered and evaporated under reduced pressure. The residue was purified by flash chromatography (3percent to 7percent, methanol- dichloromethane). The solid obtained was dried in the vacuum oven to afford 0.344 g (71percent yield) of the final compound.LRMS (m/z): 497 (M+1 )+. 1H NMR (400 MHz, DMSO-d6) d ppm 1.85 (s, 3 H), 2.40 (s, 3 H), 5.20 (dd, J=75.22, 15.83 Hz, 2 H), 6.46 (d, J=2.34 Hz, 1 H), 6.66 (none, 2 H), 6.77 - 6.82 (m, J=8.60 Hz, 1 H), 6.86 (s, 1 H), 7.06 - 7.16 (m, 3 H), 7.22 - 7.26 (m, 1 H), 7.57 (d, J=2.74 Hz, 1 H), 7.99 (s, 1 H), 10.19 (s, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium hydroxide; In water; | 2-((4-Amino-3-iodo-1 H-pyrazolo[3,4-c/]pyrirmidin-1 -yl)methyl)-3-((R)-1 - phenylethyl)pyrrolo[1 ,2-£>]pyridazin-4(3/-/)-one (100 mg, 0.20 mmol) was treated with <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (91 mg, 0.58 mmol), bis(diphenylphosphino)ferrocene-palladium(ll)dichloride dichloromethane complex (8 mg, 0.01 mmol) and a solution of sodium hydroxide ( 1 M, 390 muIota, 0.39 mmol) according to the method of Preparation 7 to give 70 mg (72percent yield) of the title compound as a white solid. Purity 99percent. LRMS (m/z): 496 (M+1 )+. 1H NMR (400 MHz, DMSO-d6) d ppm 1.68 (s, 3 H), 5.50 - 5.70 (m, 2 H), 5.91 (d, J=16.80 Hz, 1 H), 6.56 - 6.61 (m, 1 H), 6.65 (d, J=10.55 Hz, 1 H), 6.73 (d, J=8.60 Hz, 1 H), 6.81 (s, 2 H), 6.87 - 6.95 (m, 2 H), 7.09 (s, 3 H), 7.65 (s, 1 H), 8.23 (s, 1 H), 10.20 (s, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
12% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; caesium carbonate; In 1,4-dioxane; at 100℃;Inert atmosphere; | General procedure: 2-((4-Amino-3-iodo-1 H-pyrazolo[3,4-c ]pyrimidin-1 -yl)methyl)-5-bromo-3-(3- (methylsulfinyl)phenyl)pyrrolo[2,1- ][1 2 4]triazin-4(3 - )-one (0.220 g, 0.30 mmol) was dissolved in dioxane (10 ml_). (3-Fluoro-5-hydroxyphenyl)boronic acid (0.045 g, 0.30 mmol), 1 ,1 '-bis(diphenylphosphino)ferrocene-palladium(ll)dichloride dichloromethane complex (0.026 g, 0.03 mmol) and a solution of cesium carbonate ( 2M, 296 muIota, 0.59 mmol) were added. The mixture was submitted to three vacuum-argon cycles and was then stirred at 100°C overnight. The mixture was partitioned between ethyl acetate and water. The organic phase was washed with water, brine and was dried over sodium sulphate, filtered and evaporated under reduced pressure. The residue was purified by SP1 Purification System (0-7percent, methanol- dichloromethane) to give 0.022 g (12 percent yield) of the title compound as a yellow solid. L MS (m/z): 609, 61 1 (M+1 )+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
53% | With bis-triphenylphosphine-palladium(II) chloride; sodium carbonate; In 1,2-dimethoxyethane; water; at 70℃; for 2h;Inert atmosphere; | (S)-2-(1 -((5-Bromo-7-((2-(trimethylsilyl)ethoxy)methyl)-7H-pyrrolo[2,3-c/]pyriyl)amino)ethyl)-5-methyl-3^ (1 10 mg, 0.19 mmol) was dissolved in 1 .32 mL 1 ,2-dimethoxyethane and 0.33 mL water. (3-Fluoro-5- hydroxyphenyl)boronic acid (69 mg, 0.44 mmol), sodium carbonate (47 mg, 0.44 mmols) and bis(triphenylphosphine)palladium(ll) dichloride (13 mg, 0.02 mmol) were added under argon atmosphere and the mixture was heated at 70°C for 2 h. The reaction mixture was poured into a saturated ammonium chloride solution and extracted twice with water. The organics were washed with water, brine, dried over sodium sulphate, filtered and evaporated under reduced pressure. The residue was purified using SP1®Purification System (0percent to 50percent, hexane-ethyl acetate) to give 61 mg (53percent yield) of the title compound. Purity 99percent.LRMS (m/z): 626 (M+1 )+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With potassium phosphate; tris-(dibenzylideneacetone)dipalladium(0); triphenylphosphine; In butan-1-ol; at 20 - 90℃; for 40h;Inert atmosphere; | A solution of Intermediate A (54.4 g, 83.0 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (15.5 g, 99.0 mmol) and K3P04 (19.1 g, 83.0 mmol) in 1-butanol (900 ml_) was sparged with nitrogen at RT for 20 min. The mixture was treated with PPh3 (3.26 g, 12.4 mmol) and with Pd2(dba)3 (1.90 g, 2.07 mmol) and was sparged with nitrogen for an additional 10 min and was then heated to 90°C under a flow of nitrogen. After 40 hr the mixture was cooled to 70°C and water (250 ml_) was added dropwise. The mixture was cooled to 50°C for 3 hr and then to RT for 3 days during which time a beige precipitate formed. The solid was collected by filtration, washed with 1-butanol (2 x 100 ml_) and with water (2 x 100 ml_) and was then dried in vacuo at 40°C to afford the title compound, Intermediate B, as an off-white solid (35.2 g, 65percent); Rl 2.25 min, m/z 640/642 (M+H)+ (ES+). Compound (I): 2-((4-Amino-3-(3-fluoro-5-hydroxyphenyl)-1 H-pyrazolo[3,4-c/] pyrimidin- 1 -yl)methyl)-5-(3-(2-(2-methoxyethoxy)ethoxy)prop-1 -yn-1 -yl)-3-(2-(trifluoromethyl) benzyl)quinazolin-4(3H)-one. |
65% | With potassium phosphate; tris-(dibenzylideneacetone)dipalladium(0); triphenylphosphine; In butan-1-ol; at 90℃; for 40h;Inert atmosphere; | Intermediate B: 2-((4-Amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)methyl)-5-bromo-3-(2-(trifluoromethyl)benzyl)quinazolin-4(3H)-one A solution of Intermediate A (54.4 g, 83.0 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (15.5 g, 99.0 mmol) and K3PO4 (19.1 g, 83.0 mmol) in 1-butanol (900 mL) was sparged with nitrogen at RT for 20 min. The mixture was treated with PPh3 (3.26 g, 12.4 mmol) and with Pd2(dba)3 (1.90 g, 2.07 mmol) and was sparged with nitrogen for an additional 10 min and was then heated to 90° C. under a flow of nitrogen. After 40 hr the mixture was cooled to 70° C. and water (250 mL) was added dropwise. The mixture was cooled to 50° C. for 3 hr and then to RT for 3 days during which time a beige precipitate formed. The solid was collected by filtration, washed with 1-butanol (2*100 mL) and with water (2*100 mL) and was then dried in vacuo at 40° C. to afford the title compound, Intermediate B, as an off-white solid (35.2 g, 65percent); Rt 2.25 min, m/z 640/642 (M+H)+ (ES+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | With potassium phosphate; tetrakis(triphenylphosphine) palladium(0); XPhos; In 1,4-dioxane; water; at 80 - 90℃; for 24h;Inert atmosphere; | Step C A mixture of the title compound from step B, <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (1 .78g, 1 1 .39mmol, 1 .0eq), XPhos (0.32g, 0.68mmol, 0.06eq) and potassium phosphate (7.2g, 33.92mmol, 3.0eq) were dissolved in Dioxane /water 3:1 and degassed with N2. Then Palladium Tetrakis (0.39g, 0.34mmol, 0.03eq) was added to the stirring solution. The resulting reaction mixture was stirred at 80°C for 6h under N2 atmosphere. To reach completion, additional amounts of the Boronic acid (1 .0eq), Palladium Tetrakis (0.03eq) and XPhos (0.06eq) were added. The reaction mixture was stirred for an additional 18h at 90°C. The mixture was diluted with EtOAc and the layers were separated. The organic layer was washed 2x with water and once with Brine, dried (MgS04), filtered, concentrated. The crude product was further purified by flash chromatography using as eluent a gradient: Heptane:EtAOc. 100:0 to 60:40. The product fractions were collected and concentrated to obtain 7.2g of a solid (98percent yield). MH+:546.3 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
14.5 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 100℃; | To a solution of 3-iodo- 1 -tetralin- 1 -yl-pyrazolo [3 ,4-d]pyrimidin-4-amine (150 mg, 0.383 mmol) and (3-fluoro-5-hydroxy-phenyl)boronic acid (90 mg, 0.575 mmol) in DMF (3 mL) was added a solution of sodium carbonate (81 mg, 0.766 mmol) in water (3 mL) followed by the addition of tetrakis(triphenylphosphine)palladium(0) (44 mg, 0.0383 mmol). The reaction mixture was heated in a reagent bottle at 100 °C overnight. The reaction was monitored by TLC. After completion of reaction, water (20 mL) was added to the reaction mixture and the product was extracted with EtOAc (2x20 mL). The combined organic layer was again washed with water (2x15 mL) and finally with brine solution (15 mL). The organic layer was separated, and dried over anhydrous sodium sulfate. Removal of EtOAc under reduced pressure afforded a crude product that was purified by reverse phase preparative HPLC to afford 3-(4-amino- 1 -tetralin- 1 -yl-pyrazolo [3,4-d]pyrimidin-3-yl)-5-fluoro-phenol (14.5 mg) as an off-white solid. LCMS: 376.0 (M+1). ?H NMR (400 MHz, DMSO-d6) oe (ppm): 8.25 (s, 1H), 7.14 (q, J= 8.1, 7.7 Hz, 2H), 6.98 (t, J= 7.3 Hz, 1H), 6.84?6.71 (m, 2H), 6.63 (dd, J = 10.8, 2.6 Hz, 1H), 6.47 (d, J = 7.8 Hz, 1H), 6.05 (t, J = 7.2 Hz, 1H), 2.96 ?2.69 (m, 2H), 2.27 (t, J= 10.2 Hz, 1H), 2.23?2.07 (m, 2H), 1.84 (m, 1H). Separation by chiral HPLC provides Compound Nos. 1 la and 1 lb. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
140 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 90℃; for 16h; | To a solution of 3-iodo-1-(6-methyl-1, 2, 3, 4-tetrahydroquinolin-3-yl)-1H- pyrazolo[3,4-d]pyrimidin-4-amine (250 mg, 0.496 mmol) in DMF (5 mL) was added 3- fluoro-5-hydroxyphenylboronic acid (155 mg, 0.994 mmol) at RT. Then, Na2CO3 (158 mg, 1.490 mmol) dissolved in water (5 mL) was added to the reaction mixture followed by addition of Pd(PPh3)4 (57 mg, 0.049 mmol) at RT and the resultant reaction mixture was heated at 90 °C for 16 h. The reaction was monitored by TLC and through LCMS. After 16 h, the reaction mixture was diluted with water (20 mL) and extracted with EtOAc (3x25 mL). The combined organic layers were washed with water (2x50 mL), brine (30 mL), dried over sodium sulfate and concentrated. The crude compound was purified by flash chromatography using 4percent MeOH/ DCM as eluent to afford 140 mg of 3-(4-amino-1-(6-methyl-1, 2, 3, 4- tetrahydroquinolin-3-yl)- 1 H-pyrazolo [3 ,4-d]pyrimidin-3-yl)-5-fluorophenol as an off-white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
39.35 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 100℃; | To a solution of 1- (7-fluorotetralin- 1 -yl)-3-iodo-pyrazolo [3 ,4-d]pyrimidin-4-amine (270 mg, 0.65 mmol) and (3-fluoro-5-hydroxy-phenyl)boronic acid (153 mg, 0.98 mmol) in N,N-dimethylformamide (3 mL) was added a solution of sodium carbonate (139 mg, 1.31 mmol) in water (3 mL) followed by the addition of tetrakis(triphenylphosphine)palladium(0) (76 mg, 0.06 mmol). The reaction mixture was heated in a reagent bottle at 100 °C overnight. The progress of reaction was monitored by TLC. After completion of reaction, water (40 mL) was added to the reaction mixture and the product was extracted using EtOAc (2x75 mL). The combined organic layer was again washed with water (2x50 mL) and brine (50 mL). The organic layer was separated, dried over anhydrous sodium sulfate and concentrated to obtain a crude product which was purified by reverse phase preparative HPLC to obtain 3-[4-amino- 1 -(7-fluorotetralin- 1 -yl)pyrazolo [3 ,4-d]pyrimidin-3-yl] -5-fluoro-phenol (39.35 mg) as off white solid. ?HNMR (400 MHz, Methanol-d4) oe (ppm): 8.31 (s, 1H), 7.20 (dd, I = 8.6, 5.8 Hz, 1H), 6.95 ? 6.80 (m, 2H), 6.63(dt, I = 10.7, 2.3 Hz, 1H), 6.28 (dd, I = 9.8, 2.7 Hz, 1H), 6.14 (m, 1H), 3.06 ?2.94 (m, 1H), 2.87 (m, 1H), 2.52?2.35 (m, 1H), 2.26 (m,2H), 2.06 ?1.89 (m,1H), 1.29 (s, 1H). LCMS 394.1(M+1). Separation by chiral HPLC affords Compound Nos. 41a and 41b. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
51 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 100℃; for 16h; | To a solution of 1 -(5-fluoro-2,3-dihydro- 1H-inden- 1 -yl)-3-iodo- 1 H-pyrazolo[3,4- d]pyrimidin-4-amine (200 mg, 0.506 mmol) in DMF (4 mL) was added 3-fluoro-5- hydroxyphenylboronic acid (118.36 mg, 0.759 mmol) at RT. Then, Na2CO3 (160.9 mg, 1.51 mmol) dissolved in water (4 mL) was added to the reaction mixture followed by addition of Pd(PPh3)4 (58.4 mg, 0.050 mmol) at RT and the resultant reaction mixture was heated at 100°C for 16 h. The progress of reaction was monitored by TLC. After completion of reaction, the reaction mixture was cooled to RT and diluted with water (20 mL). The aq. layer was then extracted with EtOAc (2x50 mL). The combined organic layers were washed with water (25 mL), brine (25 mL), dried over sodium sulfate and concentrated to obtain a crude product which was purified by preparative HPLC to afford 3-(4-amino-1-(5-fluoro-2,3-dihydro-1H- inden- 1 -yl)- 1 H-pyrazolo [3 ,4-d]pyrimidin-3-yl)-5-fluorophenol (51 mg) as an off-white solid. ?HNMR (400 MHz, DMSO-d6) oe (ppm): 8.30 (s, 1H), 7.21 ? 7.13 (m, 1H), 7.01 ? 6.88 (m, 2H), 6.87?6.82 (m, 1H),6.79 (dt, I = 9.3, 1.9 Hz, 1H), 6.63 (dt, I = 11.0, 2.3 Hz, 1H), 6.40 (t, I = 7.3 Hz, 1H), 3.23 (dt, I = 8.8, 3.7 Hz,1H), 3.03 (dt, I = 16.0, 7.7 Hz, 1H), 2.75 ? 2.57(m, 2H). Separation by chiral HPLC affords Compound Nos. 42a and 42b. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
25 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 100℃; for 3h;Inert atmosphere; | 7-(2,3-Dihydro- 1 H-inden-2-yl)-5-iodo-7H-pyrrolo [2,3 -d]pyrimidin-4-amine (100 mg, 0.265 mmol) and tetrakistriphenyl phosphine palladium (0) (30.62 mg, 0.026 mmol)were charged in DMF (1.5 mL) and nitrogen was purged in to the reaction mixture for 5 mm. <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (62.23 mg, 0.39 mmol) was added in to the reaction mixture. Then, sodium carbonate (64.6 mg, 0.60 mmol) dissolved in water (1.5 mL) was added to the reaction mixture and again purged with nitrogen for 5 mm. The reaction mixture was stirred at 100 °C for 3 h. The progress of reaction was monitored by TLC and LCMS. After completion of reaction, the reaction mixture was allowed to come to RT and EtOAc (150 mL) was added and organic layer was separated. The organic layer was washed with water (3x20 mL) and dried over anhydrous sodium sulfate. EtOAc was evaporated under reduced pressure to obtain a crude product which was purified using reverse phase chromatography to get 7- (2,3-dihydro- 1 H-inden-2-yl) -5-(3-fluoro-5 -hydroxyphenyl)-7H- pyrrolo[2,3-d]pyrimidin-4-amine (25 mg). ?HNMR (400 MHz, DMSO-d6): oe (ppm): 10.02 (s, broad, 1H), 8.16 (s, 1H), 7.33 ? 7.17 (m, 5H), 6.66 (dp, I = 6.0, 1.6Hz, 2H), 6.51 (dt, I = 10.9, 2.3 Hz, 1H), 6.22 (s, broad, 2H), 5.56 (p, I = 7.4 Hz, 1H), 3.40 (m,4H). LCMS (M+1):361.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
430 mg | With boron tribromide; In dichloromethane; at 0 - 20℃; for 3h;Inert atmosphere; | To a stuffed solution of (3-fluoro-5-methoxy-phenyl)boronic acid (500 mg, 2.942 mmol) in DCM (15 mL) was added 1 M solution of boron tribromide in DCM (14.7 mL, 14.7 mmol) under nitrogen atmosphere at 0 °C. The reaction mixture was stirred at RT for 3h. The reaction was monitored by TLC. After completion of reaction, the mixture was concentrated under reduced pressure. Water (15 mL) was added to the residue and the pH of the mixture was adjusted to 2 by the addition of 1M HC1 (aq.). The product was extracted with EtOAc (2x25 mL). The combined organic layer was dried over anhydrous sodium sulfate and concentrated under reduced pressure to afford (3-fluoro-5-hydroxy-phenyl)boronic acid (430 mg) as an off-white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
865 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In water; N,N-dimethyl-formamide; at 110℃; for 5h; | To a stirred solution of tert-butyl N-[2-(4-amino-3-iodo-pyrazolo[3,4-d]pyrimidin- 1-yl)ethyl]-N-[(2-fluorophenyl)methyl]carbamate (865 mg, 1.689 mmol) and (3-fluoro-5- hydroxy-phenyl)boronic acid (342 mg, 2.19 mmol) in DMF (8 mL) was added a solution of sodium carbonate (537 mg, 5.067 mmol) in water (8 mL) and Pd(PPh3)4 (195 mg, 0.1689 mmol) at RT. The reaction mixture was heated at 110 C for 5h. After completion of reaction, the mixture was allowed to cool to RT followed by quenching with water (70 mL), and extraction with EtOAc (3x50 mL). The combined organic layers were washed with brine (150 mL) dried over anhydrous sodium sulfate, then concentrated under reduced pressure to give a crude product, which was purified over silica (100-200) using 70percentEtoAc/ Hexane as eluent to give tert-butyl N-[2-[4-amino-3-(3-fluoro-5-hydroxy-phenyl)pyrazolo[3,4-d]pyrimidin-1- yl]ethyl]-N-[(2-fluorophenyl)methyl]carbamate (865 mg). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
12% | With tetrakis(triphenylphosphine) palladium(0); caesium carbonate; In N,N-dimethyl-formamide; at 100℃;Microwave irradiation; | 3 -((4-amino-3 -iodo- 1 H-pyrazo lo [3 ,4-d]pyrimidin- 1 -yl)methyl)-4-phenyl- 1 Hisochromen- 1-one (intermediate Dl, 50 mg, 0.101 mmol), 3-fluoro-5- hydroxyphenylboronic acid (32 mg, 0.20 1 mmol), Cs2CO3 (69 mg, 0.202 mmol), Pd(PPh3)4 (9.3 mg, 8.0 umol), were reacted in DMF (0.5 mL) at 110°C under mwirradiation. The resulting crude was straightforward purified via reverse phase chromatography using a Biotage C18 30g SNAP with a gradient of water and acetonitrile to give the title compound (6 mg, 12 percent).1H NMR (400 MHz, DMSO-d6) oe ppm 10.5 (br s, 1 H), 8.54 (s, 1H), 8.24 (s, 1 H),8.22-8.20 (m, 1 H), 7.83-7.79 (m, 1 H), 7.66-7.62 (m, 1 H), 7.55-7.47 (m, 6 H), 7.04-7.02(m, 1 H), 6.89 (br s, 1 H), 6.84-6.82 (m, 1 H), 6.66-6.64 (m, 1 H), 5.26 (s, 2 H). UPLCMS: 5.56 mm, 479.9 [M+H]+, method 1. |
12% | With tetrakis(triphenylphosphine) palladium(0); caesium carbonate; In N,N-dimethyl-formamide; at 110℃;Microwave irradiation; | Example 35 3-((4-Amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)methyl)-4-phenyl-1H-isochromen-1-one 3-((4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)methyl)-4-phenyl-1H-isochromen-1-one (intermediate D1, 50 mg, 0.101 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (32 mg, 0.201 mmol), Cs2CO3 (69 mg, 0.202 mmol), Pd(PPh3)4 (9.3 mg, 8.0 umol), were reacted in DMF (0.5 mL) at 110° C. under mw irradiation. The resulting crude was straightforward purified via reverse phase chromatography using a Biotage C18 30 g SNAP with a gradient of water and acetonitrile to give the title compound (6 mg, 12percent). 3-((4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)methyl)-4-phenyl-1H-isochromen-1-one (intermediate D1, 50 mg, 0.101 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (32 mg, 0.201 mmol), Cs2CO3 (69 mg, 0.202 mmol), Pd(PPh3)4 (9.3 mg, 8.0 umol), were reacted in DMF (0.5 mL) at 110° C. under mw irradiation. The resulting crude was straightforward purified via reverse phase chromatography using a Biotage C18 30 g SNAP with a gradient of water and acetonitrile to give the title compound (6 mg, 12percent).1H NMR (400 MHz, DMSO-d6) delta ppm 10.5 (br s, 1H), 8.54 (s, 1H), 8.24 (s, 1H), 8.22-8.20 (m, 1H), 7.83-7.79 (m, 1H), 7.66-7.62 (m, 1H), 7.55-7.47 (m, 6H), 7.04-7.02 (m, 1H), 6.89 (br s, 1H), 6.84-6.82 (m, 1H), 6.66-6.64 (m, 1H), 5.26 (s, 2H). UPLC-MS: 5.56 min, 479.9 [M+H]+, method 1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
73.7% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; at 120℃; | 3-( 1 -(4-amino-3-iodo- 1 H-pyrazolo [3 ,4-d]pyrimidin- 1 -yl)ethyl)-4-(3-(4,4,5 ,5-tetramethyl- 1,3 -dioxolan-2-yl)phenyl)- 1 H-isochromen- 1-one (Intermediate D8, 1.14 g, 1.788 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.558 g, 3.58 mmol), K2C03(0.494 g, 3.58 mmol) and PdC12(dppf) (0.196 g, 0.268 mmol) were reacted in dioxane (30 ml) overnight at 120°C. The reaction was diluted with DCM (100 ml), filtered to remove solids, and the filtrate evaporated under reduced pressure. The crude was purified via flash chromatography on silica gel using a Biotage 1 OOG SNAP with a gradient of DCM and MeOH to give the title compound (819 mg, 73.7 percent) as brown pale solid.UPLC-MS: 1.23 mm, 622.2 [M+H]+, method 9 |
73.7% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; at 120℃; | 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(3-(4,4,5,5-tetramethyl-1,3-dioxolan-2-yl)phenyl)-1H-isochromen-1-one (Intermediate D8, 1.14 g, 1.788 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.558 g, 3.58 mmol), K2CO3 (0.494 g, 3.58 mmol) and PdCl2(dppf) (0.196 g, 0.268 mmol) were reacted in dioxane (30 ml) overnight at 120° C. The reaction was diluted with DCM (100 ml), filtered to remove solids, and the filtrate evaporated under reduced pressure. The crude was purified via flash chromatography on silica gel using a Biotage 100G SNAP with a gradient of DCM and MeOH to give the title compound (819 mg, 73.7percent) as brown pale solid.UPLC-MS: 1.23 min, 622.2 [M+H]+, method 9 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63.2% | With potassium phosphate; chloro(2-dicyclohexylphosphino-2?,6?-dimethoxy-1,1?-biphenyl)[2-(2?-amino-1,1?-biphenyl)]palladium(II); In tetrahydrofuran; water; at 80℃; for 0.5h;Inert atmosphere; Microwave irradiation; | 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid.The title compound was prepared following the procedure reported for Example 68, from tert-butyl 3-(4-(3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-1-oxo-1H-isochromen-4-yl)-1,2,3,6-tetrahydropyridine-1-carbonyl)azetidine-1-carboxylate (Intermediate D28, 0.251 g, 0.360 mmol), and <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (0.112 g, 0.720 mmol) to give tert-butyl 3-(4-(3-(1-(4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-1-oxo-1H-isochromen-4-yl)-1,2,3,6-tetrahydropyridine-1-carbonyl)azetidine-1-carboxylate (0.155 g, 0.227 mmol, 63.2percent yield).UPLC-MS: 1.03 min, 682.4 [M+H]+, method 9 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.08 g | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; water; at 120℃; for 4h;Sealed tube; Inert atmosphere; | In a sealed vial, a mixture of 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin- 1 -yl)ethyl)-6-fluoro-4-phenyl- 1 H-isochromen- 1-one (intermediate D32, 0.240 g, 0.455 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.156 g, lmmol) and K2C03 (0.138 g, 1mmol) in dioxane/H20 4:1 (10 ml) was degassed; Pd(dppf)C12 (0.04 g, 0.054 mmol) was added and the reaction was heated at 120°C for 4 hrs. 1M HC1 was added (pH 1) and the mixture was partitioned between EtOAc and water. The aqueous phase was extracted with EtOAc and the combined organic layers were washed with brine and dried over sodium sulfate. The solvent was removed and the crude was purified by flashchromatography on Biotage silica gel cartridge (cyclohexane : EtOAc = 95 : 5 to = 2080) and then triturated with ACN to yield title compound as a white solid (0.08 g, 0.16 mmo 1).1H NMR (400 MHz, DMSO-d6) oe ppm 10.19 (s, 1 H), 8.27 - 8.33 (m, 1 H), 8.09 (s, 1 H), 7.36 - 7.57 (m, 5 H), 7.13 - 7.18 (m, 1 H), 6.86 - 6.94 (m, 1 H), 6.80 - 6.86 (m, 1H), 6.66 (dt, 1 H), 6.49 (dd, 1H), 6.00 - 7.80 (m, 2 H), 5.66 - 5.78 (m, 1 H), 1.83 (d, 3 H).UPLC-MS: 1.08 mm, 512.2 [M+H]+, method 13. |
0.08 g | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; water; at 120℃; for 4h; | Example 165 3-(1-(4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-6-fluoro-4-phenyl-1H-isochromen-1-one In a sealed vial, a mixture of 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-6-fluoro-4-phenyl-1H-isochromen-1-one (intermediate D32, 0.240 g, 0.455 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.156 g, 1 mmol) and K2CO3 (0.138 g, 1 mmol) in dioxane/H2O 4:1 (10 ml) was degassed; Pd(dppf)Cl2 (0.04 g, 0.054 mmol) was added and the reaction was heated at 120° C. for 4 hrs. 1M HCl was added (pH?1) and the mixture was partitioned between EtOAc and water. The aqueous phase was extracted with EtOAc and the combined organic layers were washed with brine and dried over sodium sulfate. The solvent was removed and the crude was purified by flash chromatography on Biotage silica gel cartridge (cyclohexane:EtOAc=95:5 to =20:80) and then triturated with ACN to yield title compound as a white solid (0.08 g, 0.16 mmol). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.19 (s, 1H), 8.27-8.33 (m, 1H), 8.09 (s, 1H), 7.36-7.57 (m, 5H), 7.13-7.18 (m, 1H), 6.86-6.94 (m, 1H), 6.80-6.86 (m, 1H), 6.66 (dt, 1H), 6.49 (dd, 1H), 6.00-7.80 (m, 2H), 5.66-5.78 (m, 1H), 1.83 (d, 3H). UPLC-MS: 1.08 min, 512.2 [M+H]+, method 13 W |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
24% | General procedure: 3-(1-(4-Amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-7-methyl-4-phenyl-1H-isochromen-1-one (intermediate D29, 0.100 g, 0.19 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.036 g, 0.229 mmol) and PPh3 (0.030 g, 0.114 mmol) were dissolved in a mixture of DMF (10 ml), EtOH (4 ml) and water (4 ml); Na2CO3 (0.101 g, 0.95 mmol) was added and the mixture was degasses under nitrogen. Pd(OAc)2 (0.009 g, 0.038 mmol) was added and the reaction was heated at 80° C. for 15 min. 1M HCl was added (pH?2) and the mixture was partitioned between EtOAc and water. The organic phase was extracted with EtOAc and the combined organic layers were washed several times with brine and dried over sodium sulfate. The solvent was removed and the crude was purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM: MeOH=97:3) to afford the title compound (0.023 g, 0.045 mmol, 24percent).The title compound was made in a similar way as that of example 162, from 3-(1-(4-Amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(1-benzyl-1,2,5,6-tetrahydropyridin-3-yl)-1H-isochromen-1-one hydrochloride (intermediate D33, 1.828 g, 2.86 mmol), and <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.890 g, 5.71 mmol) to provide title compound (1.3 g, 2.1 mmol, 71percent).1H NMR (400 MHz, DMSO-d6) delta ppm 10.11-11.75 (m, 2H), 8.09-8.41 (m, 2H), 7.57-8.06 (m, 5H), 7.37-7.56 (m, 3H), 7.03-8.55 (m, 2H), 6.81-7.03 (m, 2H), 6.63-6.76 (m, 1H), 5.46-6.34 (m, 2H), 4.32-4.68 (m, 2H), 2.07-4.20 (m, 6H), 1.78-1.98 (m, 3H). UPLC-MS: 0.69 min, 589.5 [M+H]+, method 13 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71.7% | 3-(1 -(4-amino-3-iodo- 1H-pyrazolo[3,4-d]pyrimidin- 1 -yl)ethyl)-4-(5-(piperidin- 1-ylmethyl)thiophen-2-yl)- 1 H-isochromen- 1-one hydrochloride (Intermediate D9, 100 mg,0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-PdG2 (11.10 mg, 0.015 mmol) and K3P04 (151 mg, 0.462 mmol) were reacted in THF (1.2ml) and water (0.3 ml) under argon at 80 °C under mw irradiation for 30 mm The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage Cl 8 60g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1 M HC1 aqueous was added) the title compound (70 mg, 71.7 percent yield) as yellowish solid.1H NMR (400 MHz, DMSO-d6) oe ppm 10.11 - 10.46 (bs, 2 H), 8.15 - 8.31 (m, 2H), 7.77 - 8.03 (m, 1 H), 7.67 (t, J=7.50 Hz, 1 H), 7.43 (br. s., 1 H), 7.18 (d, J7.94 Hz, 2H), 6.92 (s, 1 H), 6.85 (d, J=8.82 Hz, 1 H), 6.70 (d, J=1 1.03 Hz, 1 H), 5.94 (d, J7.06 Hz,1 H), 4.53 (d, J=3.53 Hz, 2 H), 3.38 (m, H), 2.87 (d, J=11.47 Hz, 2 H), 1.61 - 1.99 (m, 8H), 1.37(d,J=11.91 Hz, 1 H). UPLC-MS: 2.82mm, 597.0 [M+H]+, method 6. | |
71.7% | With potassium phosphate; chloro(2-dicyclohexylphosphino-2?,6?-dimethoxy-1,1?-biphenyl)[2-(2?-amino-1,1?-biphenyl)]palladium(II); In tetrahydrofuran; water; at 80℃; for 0.5h;Inert atmosphere; Microwave irradiation; | 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid.1H NMR (400 MHz, DMSO-d6) delta ppm 10.11-10.46 (bs, 2H), 8.15-8.31 (m, 2H), 7.77-8.03 (m, 1H), 7.67 (t, J=7.50 Hz, 1H), 7.43 (br. s., 1H), 7.18 (d, J=7.94 Hz, 2H), 6.92 (s, 1H), 6.85 (d, J=8.82 Hz, 1H), 6.70 (d, J=11.03 Hz, 1H), 5.94 (d, J=7.06 Hz, 1H), 4.53 (d, J=3.53 Hz, 2H), 3.38 (m, H), 2.87 (d, J=11.47 Hz, 2H), 1.61-1.99 (m, 8H), 1.37 (d, J=11.91 Hz, 1H). UPLC-MS: 2.82 min, 597.0 [M+H]+, method 6. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | N2 was bubbled for 5 mm through a suspension of tert-butyl 4-(3-(1-(4-amino-3- iodo- 1 H-pyrazo lo [3 ,4-d]pyrimidin- 1 -yl)ethyl)- 1 -oxo- 1 H-isochromen-4-yl)-5 ,6-dihydropyridine-1(2H)-carboxylate (Intermediate D14, 735 mg, 1.197 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (0.28 g, 1.795 mmol), S-Phos-Pd-G2 (0.130 g, 0.179 mmol) and potassium phosphate (572 mg, 2.695 mmol) in THF/water 3:1 (8 ml). The mixture was heated at 85 °C for 1 hr by MW irradiation. A second run was performed in the same conditions on a mixture of reagents in the exact same amounts. The two reaction mixtureswere combined and conc HC1 (20 ml) was slowly added while stirring. Stirring went on at rt for 3 h, then volatiles were removed under reduced pressure. Purification by RP flash chromatography (Biotage Isolera, 60 g C18 column, gradient elution from 100:0 to 70:30 A/B in 15 CV; A: water/MeCN 95/5 + 0.01percent HCOOH, B: water/MeCN 5/95 + 0.01percent HCOOH) yielded 3 -(1 -(4-amino-3 -(3 -fluoro-5 -hydroxyphenyl)- 1 H-pyrazolo [3,4-d]pyrimidin- 1 -yl)ethyl)-4-( 1,2,3 ,6-tetrahydropyridin-4-yl)- 1 H-isochromen- 1-one formate (0.990 g, 1.8 18 mmol, 76 percent yield) as a pale yellow powder.UPLC-MS: 0.67 mm, 499.2 [M+H]+, method 2 mm | |
76% | N2 was bubbled for 5 min through a suspension of tert-butyl 4-(3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-1-oxo-1H-isochromen-4-yl)-5,6-dihydropyridine-1(2H)-carboxylate (Intermediate D14, 735 mg, 1.197 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (0.28 g, 1.795 mmol), S-Phos-Pd-G2 (0.130 g, 0.179 mmol) and potassium phosphate (572 mg, 2.695 mmol) in THF/ water 3:1 (8 ml). The mixture was heated at 85° C. for 1 hr by MW irradiation. A second run was performed in the same conditions on a mixture of reagents in the exact same amounts. The two reaction mixtures were combined and cone HCl (20 ml) was slowly added while stirring. Stirring went on at rt for 3 h, then volatiles were removed under reduced pressure. Purification by RP flash chromatography (Biotage Isolera, 60 g C18 column, gradient elution from 100:0 to 70:30 A/B in 15 CV; A: water/ MeCN 95/5+0.01percent HCOOH, B: water/MeCN 5/95+0.01percent HCOOH) yielded 3-(1-(4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(1,2,3,6-tetrahydropyridin-4-yl)-1H-isochromen-1-one formate (0.990 g, 1.818 mmol, 76percent yield) as a pale yellow powder. UPLC-MS: 0.67 min, 499.2 [M+H]+, method 2 min |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; at 120℃;Inert atmosphere; | Tert-butyl 4-(3 -(1 -(4-amino-3 -iodo- 1 H-pyrazo lo [3 ,4-d]pyrimidin- 1 -yl)ethyl)- 1- oxo- 1 H-isochromen-4-yl)-5 ,6-dihydropyridine- 1 (2H)-carboxylate (Intermediate Dl 4, 120 mg, 0.195 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (67.0 mg, 0.430 mmol), Pd(dppf)C12 (21.44 mg, 0.029 mmol) and K2C03 (59.4 mg, 0.430 mmol) were reacted in3.2 mL of dioxane under argon at 120°C overnight. The reaction mixture was diluted with AcOEt (100 mL) and washed with 0.5M HClaqueous (100 ml), washed with saturated NaChqueous, dried over Na2SO4 and evaporate to dryness. The crude was purified via flash chromatography on silica gel using a Biotage 25G SNAP with a gradient of heptane and AcOEt to give 4-(3 -(1 -(4-amino-3 -iodo- 1 H-pyrazolo [3 ,4-d]pyrimidin- 1 -yl)ethyl)- 1 -oxo20 1 H-isochromen-4-yl)-5 ,6-dihydropyridine- 1 (2H)-carboxylate (83 mg, 71 percent) as solid.UPLC-MS: 1.19 mm, 599.0 [M+H]+, method 9 |
71% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; at 120℃;Inert atmosphere; | Tert-butyl 4-(3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-1-oxo-1H-isochromen-4-yl)-5,6-dihydropyridine-1(2H)-carboxylate (Intermediate D14, 120 mg, 0.195 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (67.0 mg, 0.430 mmol), Pd(dppf)Cl2 (21.44 mg, 0.029 mmol) and K2CO3 (59.4 mg, 0.430 mmol) were reacted in 3.2 mL of dioxane under argon at 120° C. overnight. The reaction mixture was diluted with AcOEt (100 mL) and washed with 0.5M HClaqueous (100 ml), washed with saturated NaClaqueous, anhydrified over Na2SO4 and evaporate to dryness. The crude was purified via flash chromatography on silica gel using a Biotage 25G SNAP with a gradient of heptane and AcOEt to give 4-(3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-1-oxo-1H-isochromen-4-yl)-5,6-dihydropyridine-1(2H)-carboxylate (83 mg, 71percent) as solid.UPLC-MS: 1.19 min, 599.0 [M+H]+, method 9 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
24% | With palladium diacetate; sodium carbonate; triphenylphosphine; In ethanol; water; N,N-dimethyl-formamide; at 80℃; for 0.25h;Inert atmosphere; | 3 -(1 -(4-Amino-3 -iodo- 1 H-pyrazo lo [3 ,4-d]pyrimidin- 1 -yl)ethyl)-7-methyl-4-phenyl-1H-isochromen-1-one (intermediate D29, 0.100 g, 0.19 mmol), (3-fluoro-5- hydroxyphenyl)boronic acid (0.036 g, 0.229 mmol) and PPh3 (0.030 g, 0.114 mmol) were dissolved in a mixture of DMF (10 ml), EtOH (4 ml) and water (4 ml); Na2CO3 (0.10 1 g,0.95 mmol) was added and the mixture was degasses under nitrogen. Pd(OAc)2 (0.009 g,0.038 mmol) was added and the reaction was heated at 80°C for 15 mi 1M HC1 was added (pH 2) and the mixture was partitioned between EtOAc and water. The organic phase was extracted with EtOAc and the combined organic layers were washed several times with brine and dried over sodium sulfate. The solvent was removed and the crudewas purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM MeOH = 97 : 3) to afford the title compound (0.023 g, 0.045 mmol, 24percent).1H NMR (400 MHz, DMSO-d6) oe ppm 10.19 (s, 1 H), 8.09 (s, 1 H), 8.03 (br. s, 1 H), 7.47 - 7.69 (m, 2 H), 7.30 - 7.47 (m, 3 H), 7.09 - 7.14 (m, 1 H), 6.89 - 6.92 (m, 1 H), 6.77 - 6.86 (m, 2 H), 6.66 (dt, 1 H), 6.00 - 8.00 (m, 2 H), 5.68 - 5.76 (m, 1 H), 2.42 (s, 3H), 1.82 (d, 3 H). UPLC-MS: 1.10 mm, 508.2 [M+H]+, method 13. |
24% | With palladium diacetate; sodium carbonate; triphenylphosphine; In ethanol; water; N,N-dimethyl-formamide; at 80℃; for 0.25h;Inert atmosphere; | 3-(1-(4-Amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-7-methyl-4-phenyl-1H-isochromen-1-one (intermediate D29, 0.100 g, 0.19 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.036 g, 0.229 mmol) and PPh3 (0.030 g, 0.114 mmol) were dissolved in a mixture of DMF (10 ml), EtOH (4 ml) and water (4 ml); Na2CO3 (0.101 g, 0.95 mmol) was added and the mixture was degasses under nitrogen. Pd(OAc)2 (0.009 g, 0.038 mmol) was added and the reaction was heated at 80° C. for 15 min. 1M HCl was added (pH?2) and the mixture was partitioned between EtOAc and water. The organic phase was extracted with EtOAc and the combined organic layers were washed several times with brine and dried over sodium sulfate. The solvent was removed and the crude was purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM: MeOH=97:3) to afford the title compound (0.023 g, 0.045 mmol, 24percent).1H NMR (400 MHz, DMSO-d6) delta ppm 10.19 (s, 1H), 8.09 (s, 1H), 8.03 (br. s, 1H), 7.47-7.69 (m, 2H), 7.30-7.47 (m, 3H), 7.09-7.14 (m, 1H), 6.89-6.92 (m, 1H), 6.77-6.86 (m, 2H), 6.66 (dt, 1H), 6.00-8.00 (m, 2H), 5.68-5.76 (m, 1H), 2.42 (s, 3H), 1.82 (d, 3H). UPLC-MS: 1.10 min, 508.2 [M+H]+, method 13. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71.7% | General procedure: 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid.1H NMR (400 MHz, DMSO-d6) delta ppm 10.11-10.46 (bs, 2H), 8.15-8.31 (m, 2H), 7.77-8.03 (m, 1H), 7.67 (t, J=7.50 Hz, 1H), 7.43 (br. s., 1H), 7.18 (d, J=7.94 Hz, 2H), 6.92 (s, 1H), 6.85 (d, J=8.82 Hz, 1H), 6.70 (d, J=11.03 Hz, 1H), 5.94 (d, J=7.06 Hz, 1H), 4.53 (d, J=3.53 Hz, 2H), 3.38 (m, H), 2.87 (d, J=11.47 Hz, 2H), 1.61-1.99 (m, 8H), 1.37 (d, J=11.91 Hz, 1H). UPLC-MS: 2.82 min, 597.0 [M+H]+, method 6. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate; chloro(2-dicyclohexylphosphino-2?,6?-dimethoxy-1,1?-biphenyl)[2-(2?-amino-1,1?-biphenyl)]palladium(II); In tetrahydrofuran; water; at 80℃; for 0.5h;Inert atmosphere; Microwave irradiation; | General procedure: 3-(1-(4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl)ethyl)-4-(5-(piperidin-1-ylmethyl)thiophen-2-yl)-1H-isochromen-1-one hydrochloride (Intermediate D9, 100 mg, 0.154 mmol), <strong>[871329-82-7]3-fluoro-5-hydroxyphenylboronic acid</strong> (48.1 mg, 0.308 mmol), S-Phos-Pd-G2 (11.10 mg, 0.015 mmol) and K3PO4 (151 mg, 0.462 mmol) were reacted in THF (1.2 ml) and water (0.3 ml) under argon at 80° C. under mw irradiation for 30 min The reaction was quenched by the addition of 1M HClaqueous (2 ml) and the mixture purified via reverse phase chromatography using a Biotage C18 60 g SNAP with a gradient of water and acetonitrile to give (prior to drying a small amount of 1M HCl aqueous was added) the title compound (70 mg, 71.7percent yield) as yellowish solid.1H NMR (400 MHz, DMSO-d6) delta ppm 10.11-10.46 (bs, 2H), 8.15-8.31 (m, 2H), 7.77-8.03 (m, 1H), 7.67 (t, J=7.50 Hz, 1H), 7.43 (br. s., 1H), 7.18 (d, J=7.94 Hz, 2H), 6.92 (s, 1H), 6.85 (d, J=8.82 Hz, 1H), 6.70 (d, J=11.03 Hz, 1H), 5.94 (d, J=7.06 Hz, 1H), 4.53 (d, J=3.53 Hz, 2H), 3.38 (m, H), 2.87 (d, J=11.47 Hz, 2H), 1.61-1.99 (m, 8H), 1.37 (d, J=11.91 Hz, 1H). UPLC-MS: 2.82 min, 597.0 [M+H]+, method 6. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium phosphate; In water; N,N-dimethyl-formamide; at 120℃; for 20h; | Intermediate AA6: 3-{4-amino-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-5-fluorophenol 3-Iodo-1H-pyrazolo[3,4-d]pyrimidin-4-amine (1.00 g, 3.83 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.896 g, 5.7 mmol), PdCl2(dppf) (0.700 g, 0.95 mmol) and K3PO4 (1.625 g, 7.66 mmol) were dissolved in a mixture of DMF (10 ml) and water (6 mL) and the reaction was heated at 120° C. for 20 h. The mixture was diluted with EtOAc and 2M HCl and the resulting suspension was filtered. The phases were separated and the organic layer was extracted twice with 2M HCl. The combined aqueous layers were basified with a saturated aqueous solution of Na2CO3 to pH 10 and extracted with EtOAc. The organic phase was dried over sodium sulfate and the solvent was evaporated to afford title compound as a crude (yield considered to be quantitative) which was used in the next step without any additional purification. MS/ESI+ 246.2 [MH]+, Rt=0.40 min (Method A). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.04 g | Example 117 3-(4-amino-1-{1-[3-(5-[bis(2-hydroxyethyl)amino]methyl}pyridin-2-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluorophenol A mixture of crude 3-iodo-1-[1-(3-{5-[(2,2,3,3,11,11,12,12-octamethyl-4,10-dioxa-7-aza-3,11-disilatridecan-7-yl)methyl]pyridin-2-yl}indolizin-2-yl)ethyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine W32 (0.214), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.044 g, 0.285 mmol) and Pd(PPh3)4 (0.015 g, 0.013 mmol), in DME (9.3 ml), EtOH (1.7 mL) and saturated aqueous Na2CO3 (3.5 ml) was heated at 80° C. for 3 h. The mixture was partitioned between water and DCM and the aqueous phase was extracted with DCM; the combined organic layers were washed with brine and dried over sodium sulfate, and the solvent was removed under reduced pressure. The residue was dissolved in a 1M solution of aqueous HCl in EtOH (prepared from aqueous 37percent HCl in EtOH) (3.5 mL) and the mixture was stirred at r.t. for 3 h. The volatiles were removed under reduced pressure and the crude was dissolved in MeOH, charged on a SCX cartridge (1 g) washing with MeOH, and then eluted with 1M NH3 in MeOH. The basic fractions were evaporated and the residue was purified by flash chromatography on silica gel cartridge (DCM to DCM:MeOH=85:15) to afford title compound as a yellow solid (0.040 g). MS/ESI+ 583.3 [MH]+, Rt 0.62 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.18 (s, 1H), 8.65-8.68 (m, 1H), 8.60 (d, 1H), 8.17 (s, 1H), 7.87 (dd, 1H), 7.70 (d, 1H), 7.46-7.50 (m, 1H), 6.90-6.93 (m, 1H), 6.83-6.89 (m, 1H), 6.76-6.82 (m, 1H), 6.64-6.69 (m, 2H), 6.55-6.61 (m, 1H), 6.49 (q, 1H), 6.20-7.30 (m, 2H), 4.43 (t, 2H), 3.76 (s, 2H), 3.46-3.56 (m, 4H), 2.60 (t, 4H), 1.90 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.017 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; | Step 1: tert-butyl 9-[(2-{1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]ethyl}indolizin-3-yl)methyl]-3,9-diazaspiro[5.5]undecane-3-carboxylate 143a Prepared similarly to Example 85, starting from crude tert-butyl 9-[2-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)indolizin-3-yl]methyl}-3,9-diazaspiro[5.5]undecane-3-carboxylate W56 (0.370 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.129 g, 0.828 mmol) and Pd(PPh3)4 (0.032 g, 0.028 mmol), in DME (18 ml), EtOH (3 mL) and saturated aqueous Na2CO3 (5.5 ml), heating at 80° C. overnight; after work-up the crude was purified by flash chromatography on Biotage silica-NH SNAP cartridge (DCM to DCM:MeOH=95:5) to afford title compound (0.017 g, 0.026 mmol). MS/ESI+ 655.5 [MH]+, Rt 1.46 min (Method J). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.032 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; for 3h; | (3 aR,6aS)-5-[(2-{1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]ethyl}indolizin-3-yl)methyl]-octahydropyrrolo[3,4-c]pyrrole-2-carboxylate 145a Prepared similarly to Example 85, starting from crude tert-butyl (3aR,6aS)-5-[2-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)indolizin-3-yl]methyl}-octahydropyrrolo[3,4-c]pyrrole-2-carboxylate W58 (0.152 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.041 g, 0.266 mmol) and Pd(PPh3)4 (0.014 g, 0.012 mmol), in DME (8.6 ml), EtOH (1.6 mL) and saturated aqueous Na2CO3 (3.3 ml), heating at 80° C. for 3 h; after work-up the crude was purified by flash chromatography on Biotage silica-NH SNAP cartridge (DCM to DCM:MeOH=90:10) to afford title compound as a yellow solid (0.032 g). MS/ESI+ 613.3 [MH]+, Rt 1.23 min (Method C). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.77 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; for 2h; | Example 85 3-{4-amino-1-[1-(3-phenylindolizin-2-yl)ethyl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-5-fluorophenol A mixture of 3-iodo-1-[1-(3-phenylindolizin-2-yl)ethyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine W1 (0.110 g, 0.23 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.040 g, 0.25 mmol) and Pd(PPh3)4 (14.4 mg, 0.012 mmol), in DME (9.5 mL), EtOH (1.66 mL) and saturated aqueous Na2CO3 (3.2 mL) was heated at 80° C. for 2 h. The mixture was partitioned between water and DCM, the aqueous phase was extracted with DCM and the combined organic layers were washed with brine and dried over sodium sulfate. The solvent was removed under reduced pressure and the residue was purified by flash chromatography on 28 g silica-NH Biotage SNAP cartridge (DCM:MeOH=99:1 to 80:20) to afford title compound as a white solid (0.077 g). MS/ESI+ 465.3 [MH]+, Rt 1.09 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.17 (br. s., 1H), 8.16 (s, 1H), 7.83 (d, 1H), 7.38-7.54 (m, 6H), 6.91 (br. s., 1H), 6.81-6.89 (m, 1H), 6.62-6.74 (m, 3H), 6.46-6.53 (m, 1H), 6.26-7.37 (m, 2H), 6.21 (q, 1H), 1.84 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.265 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; | Example 79 3-(4-amino-1-{1-[3-(pyridin-2-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluorophenol 3-Iodo-1-{1-[3-(pyridin-2-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-4-amine W2 (0.465 g, 0.96 mmol) was equally divided in five vials. Each one was reacted with <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.0374 g, 0.24 mmol), Pd(PPh3)4 (0.011 g, 0.0094 mmol), DME (18.7 ml), ethanol (2.8 ml) and saturated aqueous sodium carbonate (5.3 ml) at 80° C. overnight. Then they were collected and quenched in water and finally extracted with DCM. The combined organic layers were dried over sodium sulfate, filtered and concentrated. The residue was purified by flash chromatography on Biotage silica-NH SNAP cartridge (DCM:MeOH=98:2 to 94:6) to afford title compound (0.265 g). MS/ESI+ 466.3 [MH]+, Rt 0.81 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.17 (br. s., 1H), 8.69-8.75 (m, 1H), 8.59-8.65 (m, 1H), 8.17 (s, 1H), 7.91 (td, 1H), 7.74 (d, 1H), 7.49 (d, 1H), 7.32-7.38 (m, 1H), 6.89-6.93 (m, 1H), 6.77-6.89 (m, 2H), 6.63-6.70 (m, 2H), 6.56-6.62 (m, 1H), 6.49 (q, 1H), 6.40-7.46 (m, 2H), 1.91 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.02 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; for 3h; | Example 86 3-(4-amino-1-{1-[3-(2-fluorophenyl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluoro-phenol Prepared similarly to Example 85, starting from 1-{1-[3-(2-fluorophenyl)indolizin-2-yl]ethyl}-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-4-amine W3 (0.114 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.039 g, 0.251 mmol) and Pd(PPh3)4 (0.013 g, 0.0114 mmol), in DME (9.4 mL), EtOH (1.6 mL) and saturated aqueous Na2CO3 (3.2 mL), heating at 80° C. for 3 h. After work-up the crude was purified by flash chromatography on silica N-H Biotage SNAP cartridge (DCM:MeOH=98:2 to 80:20) to afford title compound as a white solid (0.020 g). MS/ESI+ 483.0 [MH]+, Rt 1.03 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.12-10.18 (m, 1H), 8.02-8.18 (m, 1H), 7.16-7.62 (m, 6H), 6.49-6.95 (m, 6H), 6.09-6.25 (m, 1H), 6.00-7.5 (m, 2H), 1.76-1.95 (M, 3H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.1 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; | Example 82 3-(4-amino-1-{1-[3-(pyridin-4-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluorophenol 3-Iodo-1-{1-[3-(pyridin-4-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-4-amine W4 (0.216 g, 0.45 mmol) was split in two vials (0.108 g each one); each one was reacted with <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.0455 g, 0.29 mmol each one), Pd(PPh3)4 (0.013 g, 0.011 mmol each one), DME (15.4 mL each one), ethanol (2.3 mL each one) and saturated aqueous sodium carbonate (4.2 mL each one) at 80° C. overnight. Then, they were collected and quenched with water and extracted with DCM. The combined organic layers were dried over sodium sulfate, filtered and concentrated. The residue was purified by flash chromatography on 28 g Biotage silica-NH SNAP cartridge (DCM to DCM:MeOH=90:10) to afford title compound (0.100 g). MS/ESI+ 466.3 [MH]+, Rt 0.68 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.18 (br. s., 1H), 8.62-8.68 (m, 2H), 8.19 (s, 1H), 8.07 (d, 1H), 7.48-7.55 (m, 3H), 6.89-6.93 (m, 1H), 6.77-6.88 (m, 2H), 6.76 (s, 1H), 6.64-6.70 (m, 1H), 6.55-6.62 (m, 1H), 6.30 (q, 1H), 6.20-7.46 (m, 2H), 1.90 (d, 3H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.012 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; | Example 87 3-(4-amino-1-{1-[6-methyl-3-(pyridin-2-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-3-yl)-5-fluorophenol Prepared similarly to Example 85, starting from crude 3-iodo-1-{1-[6-methyl-3-(pyridin-2-yl)indolizin-2-yl]ethyl}-1H-pyrazolo[3,4-d]pyrimidin-4-amine W5 (0.130 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.041 g, 0.26 mmol) and Pd(PPh3)4 (0.015 g, 0.013 mmol), in DME (15 mL), EtOH (2.6 mL) and saturated aqueous Na2CO3 (4 mL), heating at 80° C. overnight. After work-up the crude was purified by flash chromatography on 11 g silica-NH Biotage SNAP cartridge (DCM to DCM:MeOH=90:10) to afford title compound as an off-white solid (0.012 g) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.074 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; for 4h; | Example 90 3-[4-amino-1-(1-{3-[5-(morpholin-4-ylmethyl)thiophen-2-yl]indolizin-2-yl}ethyl)-1H-pyrazolo[3,4-d]pyrimidin-3-yl]-5-fluorophenol Prepared similarly to Example 85, starting from crude 3-iodo-1-(1-{3-[5-(morpholin-4-ylmethyl)thiophen-2-yl]indolizin-2-yl}ethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine W8 (0.325 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.095 g, 0.61 mmol) and Pd(PPh3)4 (0.032 g, 0.027 mmol), in DME (20 mL), EtOH (3.8 mL) and saturated aqueous Na2CO3 (7.6 mL), heating at 80° C. for 4 h. After work-up the crude was purified by flash chromatography on Biotage silica-NH SNAP cartridge (DCM to DCM:MeOH=94:6) to afford title compound as a white solid (0.074 g). MS/ESI+ 570.2 [MH]+, Rt 1.02 min (Method C). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.15 (s, 1H), 8.13 (s, 1H), 7.94 (d, 1H), 7.46 (d, 1H), 7.03 (d, 1H), 6.99 (d, 1H), 6.87-6.91 (m, 1H), 6.80-6.86 (m, 1H), 6.71-6.78 (m, 1H), 6.61-6.68 (m, 2H), 6.56-6.61 (m, 1H), 6.50-7.43 (m, 2H), 6.30 (q, 1H), 3.63-3.73 (m, 2H), 3.52-3.61 (m, 4H), 2.35-3.45 (m, 4H), 1.85 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.021 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; at 80℃; for 4h; | Intermediate X: tert-butyl 4-(2-{1-[4-amino-3-(3-fluoro-5-hydroxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]ethyl}indolizin-3-yl)-1,2,3,6-tetrahydropyridine-1-carboxylate A mixture of crude tert-butyl 4-[2-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)indolizin-3-yl]-1,2,3,6-tetrahydropyridine-1-carboxylate W14 (0.19 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.032 g, 0.209 mmol) and Pd(PPh3)4 (0.010 g, 0.0095 mmol) DME (7.7 mL), ethanol (1.37 mL) and saturated aqueous sodium carbonate (2.60 mL) was heated at 80° C. for 4 h. The mixture was partitioned between water and DCM, the aqueous phase was extracted with DCM and the combined organic layers were washed with brine and dried over sodium sulfate. The solvent was removed under reduced pressure and the residue was purified by flash chromatography on 5 g silica-NH cartridge (DCM to DCM:MeOH=94:6) to afford title compound as light-yellow oil (0.021 g, 0.037 mmol). MS/ESI+ 570.5 [MH]+, Rt 1.17 min (Method A). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.056 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 80℃; | Prepared similarly to Example 2, starting from 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-2-[2-(morpholin-4-yl)ethyl]-4-phenyl-2,3-dihydropyridazin-3-one J14 (0.114), heating at 80° C. overnight; additional <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (1.1 eq) and Pd(PPh3)4 (0.05 eq) were added and the mixture was heated at the same temperature for further 2 h. The crude was purified by flash chromatography on Biotage silica-NH cartridge (DCM to DCM:MeOH to 90:10) to afford title compound as a white solid (0.056 g, 0.099 mmol). MS/ESI+ 557.4 [MH]+, Rt 0.54 min (Method A). 1H NMR (500 MHz, DMSO-d6) delta ppm 10.22 (br. s., 1H), 8.14-8.18 (m, 2H), 7.37-7.50 (m, 3H), 7.28-7.36 (m, 2H), 6.91-6.95 (m, 1H), 6.85-6.91 (m, 1H), 6.68 (dt, 1H), 5.93-8.36 (m, 2H), 5.82 (q, 1H), 4.10-4.23 (m, 2H), 3.45-3.53 (m, 4H), 2.63 (t, 2H), 2.34-2.44 (m, 4H), 1.78 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.024 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 65 - 80℃; | Prepared similarly to Example 2, starting from 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-4-phenyl-2-(pyridin-3-yl)-2,3-dihydropyridazin-3-on J15 (0.080 g), heating at 65° C. overnight; additional (3-fluoro-5-hydroxyphenyl)-boronic acid (1.1 eq) and Pd(PPh3)4 (0.06) were added and the mixture was heated at 80° C. for 2 h. The crude was purified by flash chromatography on silica-NH cartridge (DCM:MeOH=99:1 to 90:10) to afford title compound as a white solid (0.024 g, 0.046 mmol). MS/ESI+ 521.3 [MH]+, Rt 0.81 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.23 (br. s., 1H), 8.82 (d, 1H), 8.59 (dd, 1H), 8.41 (s, 1H), 8.19 (s, 1H), 8.03-8.09 (m, 1H), 7.42-7.57 (m, 6H), 6.91-6.99 (m, 2H), 6.66-6.73 (m, 1H), 6.00-8.00 (m, 2H), 5.91 (q, 1H), 1.85 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
35% | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 20℃; for 4h; | A mixture of 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-2-benzyl-6-phenyl-2,3-dihydropyridazin-3-one J1 (0.094 g, 0.17 mmol), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.029 g, 0.188 mmol) and Pd(PPh3)4 (10 mg, 0.008 mmol) in DME (12 mL), ethanol (2 mL) and saturated aqueous sodium carbonate (4 mL) was stirred at room temperature for 4 hours. The reaction was quenched by addition of water and extracted with DCM; the organic layer was dried over sodium sulfate, filtered and concentrated. The residue was purified by flash chromatography on Biotage silica-NH cartridge (DCM to DCM:MeOH=80:20) to afford title compound (32.2 mg, 0.06 mmol, 35percent yield). MS/ER+534.3 [MH]+, Rt 0.95 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.20 (br. s., 1H), 8.08 (s, 1H), 7.21-7.36 (m, 10H), 6.98-7.00 (m, 1H), 6.83-6.87 (m, 1H), 6.74-6.80 (m, 1H), 6.64-6.69 (m, 1H), 6.04 (q, 1H), 6.00-8.00 (m, 2H), 5.19-5.34 (m, 2H), 1.66 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
10.5 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 80℃; for 4h; | A mixture of 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-2-methyl-6-phenyl-2,3-dihydropyridazin-3-one J2 (0.102 g), <strong>[871329-82-7](3-fluoro-5-hydroxyphenyl)boronic acid</strong> (0.037 g, 0.236 mmol), Pd(PPh3)4 (12 mg, 0.01 mmol) in DME (12 mL), ethanol (2 mL) and saturated aqueous sodium carbonate (4 mL) was heated at 80° C. for 4 hours. The reaction was quenched by addition of water and extracted with DCM; the organic layer was dried over sodium sulfate, filtered and concentrated. The residue was purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM:MeOH=80:20) to afford title compound (10.5 mg, 0.022 mmol). MS/ESI+ 458.3 [MH]+, Rt 0.73 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.20 (br. s., 1H), 8.09 (s, 1H), 7.24-7.31 (m, 5H), 6.90-6.93 (m, 1H), 6.84-6.88 (m, 1H), 6.77-6.82 (m, 1H), 6.64-6.69 (m, 1H), 6.25-7.50 (m, 2H), 6.01 (q, 1H), 3.66 (s, 3H), 1.65 (d, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.045 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 80℃; | Prepared similarly to Example 2, starting from 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-6-phenyl-2-(propan-2-yl)-2,3-dihydropyridazin-3-one J3 (0.100 g), heating at 80° C. overnight; additional (3-fluoro-5-hydroxyphenyl)-boronic acid (0.5 eq) and Pd(PPh3)4 (0.05 eq) were added and the mixture was heated at the same temperature for further 7 h. The crude was purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM:MeOH=95:5) to afford title compound as a pale yellow powder (0.045 g, 0.093 mmol). MS/ESI+ 486.3 [MH]+, Rt 0.88 min (Method A). 1H NMR (400 MHz, DMSO-d6) delta ppm 10.22 (br. s., 1H), 8.12 (s, 1H), 7.25-7.37 (m, 5H), 6.83-6.89 (m, 2H), 6.76-6.82 (m, 1H), 6.64-6.70 (m, 1H), 6.06 (q, 1H), 6.00-8.00 (m, 2H), 5.09-5.20 (m, 1H), 1.65 (d, 3H), 1.22-1.30 (m, 6H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.0153 g | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 80℃; for 16h; | Prepared similarly to Example 2, starting from 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-2-(cyclopropylmethyl)-6-phenyl-2,3-dihydropyridazin-3-one J4 (0.105 g), heating at 80° C. for 16 h, and purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM:MeOH=80:20) to afford title compound (0.0153 g, 0.031 mmol). MS/ESI+ 498.3 [MH]+, Rt 0.89 min (Method A). 1H NMR (500 MHz, DMSO-d6) delta ppm 10.20 (s, 1H), 8.10 (s, 1H), 7.23-7.34 (m, 5H), 6.92 (s, 1H), 6.86 (s, 1H), 6.76-6.81 (m, 1H), 6.63-6.69 (m, 1H), 6.30-7.90 (m, 2H), 6.05 (q, 1H), 3.83-4.03 (m, 2H), 1.66 (d, 3H), 1.16-1.32 (m, 1H), 0.42-0.51 (m, 2H), 0.29-0.41 (m, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
7.7 mg | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; ethanol; water; at 80℃; for 16h; | Prepared similarly to Example 2, starting from 5-(1-{4-amino-3-iodo-1H-pyrazolo[3,4-d]pyrimidin-1-yl}ethyl)-6-phenyl-2-(pyridin-2-ylmethyl)-2,3-dihydropyridazin-3-one J6 (0.031 g), heating at 80° C. for 16 h, and purified by flash chromatography on Biotage silica gel cartridge (DCM to DCM:MeOH=80:20) to afford title compound (7.7 mg, 0.014 mmol). MS/ESI+ 535.3 [MH]+, Rt 0.73 min (Method A). |
Tags: 871329-82-7 synthesis path| 871329-82-7 SDS| 871329-82-7 COA| 871329-82-7 purity| 871329-82-7 application| 871329-82-7 NMR| 871329-82-7 COA| 871329-82-7 structure
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