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[ CAS No. 100644-66-4 ] {[proInfo.proName]}

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Chemical Structure| 100644-66-4
Chemical Structure| 100644-66-4
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Product Details of [ 100644-66-4 ]

CAS No. :100644-66-4 MDL No. :MFCD18793423
Formula : C6H6ClN5 Boiling Point : -
Linear Structure Formula :- InChI Key :LSZNUJWHYLMPRG-UHFFFAOYSA-N
M.W : 183.60 Pubchem ID :20785205
Synonyms :

Calculated chemistry of [ 100644-66-4 ]

Physicochemical Properties

Num. heavy atoms : 12
Num. arom. heavy atoms : 9
Fraction Csp3 : 0.17
Num. rotatable bonds : 0
Num. H-bond acceptors : 3.0
Num. H-bond donors : 1.0
Molar Refractivity : 46.0
TPSA : 69.62 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : No
P-gp substrate : No
CYP1A2 inhibitor : Yes
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.85 cm/s

Lipophilicity

Log Po/w (iLOGP) : 1.46
Log Po/w (XLOGP3) : 0.8
Log Po/w (WLOGP) : 0.61
Log Po/w (MLOGP) : 0.58
Log Po/w (SILICOS-IT) : 0.4
Consensus Log Po/w : 0.77

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 1.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -2.04
Solubility : 1.68 mg/ml ; 0.00918 mol/l
Class : Soluble
Log S (Ali) : -1.84
Solubility : 2.63 mg/ml ; 0.0143 mol/l
Class : Very soluble
Log S (SILICOS-IT) : -1.99
Solubility : 1.9 mg/ml ; 0.0104 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.83

Safety of [ 100644-66-4 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P280-P305+P351+P338-P310 UN#:N/A
Hazard Statements:H302-H315-H319-H332-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 100644-66-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 100644-66-4 ]

[ 100644-66-4 ] Synthesis Path-Downstream   1~19

  • 1
  • [ 100644-65-3 ]
  • [ 74-88-4 ]
  • 6-amino-4-chloro-1-methyl-1H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
  • 2
  • [ 100644-65-3 ]
  • [ 74-88-4 ]
  • 6-amino-4-chloro-1-methyl-1H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
  • 6-amino-4-chloro-2-methyl-2H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
  • 3
  • [ 5604-46-6 ]
  • [ 100644-66-4 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: 80 percent / N2H4 / 1,2-dimethoxy-ethane 2: 50percent aq. NaOH, benzyltriethylammonium chloride / CH2Cl2
  • 4
  • [ 1188265-73-7 ]
  • 6-amino-4-chloro-1-methyl-1H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
  • C17H27N7O3 [ No CAS ]
YieldReaction ConditionsOperation in experiment
With N-ethyl-N,N-diisopropylamine; In butan-1-ol; at 100℃; for 4h; Intermediate 13 (2.00 g, 10.9 mmol) and tert-butyl 3-(2-hydroxyethyl)piperazine- 1-carboxylate (10.9 mmol, 2.51 g) in n-butanol (51 mL) and DIPEA (13.1 mmol, 1.71 g, 2.42 mL) was heated at 100C for 4 h. The reaction mixture was cooled, partitioned between DCM and water and filtered, then the organic phases were separated and concentrated in vacuo. The residual oil was purified by flash column chromatography on silica (Biotage SNAP 50g, Isolera, gradient elution: 100% DCM to 35% MeOH/DCM). The resulting clear oil was taken up in DCM (40 mL) and HC1 (4N in 1,4-dioxane, 8 mL). The solution was stirred overnight, then concentrated to dryness and washed with diethyl ether. The resulting sticky solid was dried under vacuum to yield the title compound (1.5 g, 39%) as an off-white foam. LCMS (ES+) [M+H]+ 278, RT 2.13 minutes (method 2).
  • 5
  • [ 1279815-98-3 ]
  • [ 100644-66-4 ]
  • [ 1616415-96-3 ]
YieldReaction ConditionsOperation in experiment
68% With N-ethyl-N,N-diisopropylamine In butan-1-ol at 100℃; for 72h; INTERMEDIATE 77 4-[4-benzyl-2-(2,2,2-trifluoroethyl)piperazin-1-yl]-1-methylpyrazolo[3,4-d]pyrimidin-6-amine Intermediate 13 (2.13 g, 11.62 mmol) and l-benzyl-3-(2,2,2-trifluoroethyl)- piperazine (3 g, 11.62 mmol) in n-butanol (30 mL) and DIPEA (4.5 g, 34.8 mmol) were heated at 100°C for 72 h. The reaction mixture was cooled, then concentrated in vacuo. The residue was diluted with DCM and washed with sodium bicarbonate, then water, then brine. The organic layers were dried over magnesium sulphate and concentrated in vacuo. The residual oil was purified by flash column chromatography on silica, using a gradient of 40-100% EtOAc in heptane, to yield the title compound (3.2 g, 68%>) as a yellow solid. LCMS (ES+) [M+H]+ 406.3, RT 1.61 minutes (method 1).
  • 6
  • [ 5604-46-6 ]
  • [ 60-34-4 ]
  • 6-amino-4-chloro-1-methyl-1H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
YieldReaction ConditionsOperation in experiment
82.6% With triethylamine; In tetrahydrofuran; at 5 - 20℃; To a suspension of <strong>[5604-46-6]2-amino-4,6-dichloropyrimidine-5-carbaldehyde</strong> (5.35 g, 26.75 mmol) in THF (60 mL) was added triethylamine (11.5 mL, 82.5 mmol) and the mixture was cooled to 5C (ice bath). Methylhydrazine (1.4 mL, 27 mmol) was added, and the mixture was stirred at 5C for 1 h, before warming to r.t. The bright yellow mixture was stirred at r.t. for a further 30 minutes before filtering under reduced pressure. The resulting solid was washed with diethyl ether followed by water, then dried, to yield the title compound (4.06 g, 82.6%) as a yellow solid. deltaEta (DMSO-d6) 7.97 (s, 1H), 7.29 (s, 2H), 3.79 (s, 3H).
  • 7
  • [ 100644-66-4 ]
  • [ 1616415-14-5 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 3 steps 1: N-ethyl-N,N-diisopropylamine / 1,4-dioxane / 49 h / 80 - 100 °C 2: hydrogenchloride / 1,4-dioxane / 72 h 3: N-ethyl-N,N-diisopropylamine / acetonitrile / 6 h / 20 °C
  • 8
  • [ 278788-66-2 ]
  • 6-amino-4-chloro-1-methyl-1H-pyrazolo<3,4-d>pyrimidine [ No CAS ]
  • [ 1616415-42-9 ]
YieldReaction ConditionsOperation in experiment
57.1% With N-ethyl-N,N-diisopropylamine; In 1,4-dioxane; at 80 - 100℃; for 49h; To Intermediate I 3 (3.99 g, 21.7 mmol) was added tert-butyl (3i?)-3-(hydroxy- methyl)piperazine-l -carboxylate (5.21 g, 24 mmol), and the mixture was suspended in 1,4-dioxane (100 mL). To this was added DIPEA (4.6 mL, 26 mmol) and the mixture was heated at 80C for 1 h. Further DIPEA (9 mL) was added and the mixture was heated at 100C for 48 h. The reaction mixture was cooled to r.t. and concentrated in vacuo, to yield an orange solid which was triturated with water/ether/dichloromethane and filtered. The solid was discarded, and the filtrate was concentrated in vacuo. The resulting orange oil was purified by flash column chromatography on silica [Biotage SNAP 200g, Isolera, gradient elution (80% EtOAc/isohexanes to 100% EtOAc; followed by 100% DCM to 20% MeOH/DCM)], to yield the title compound (4.51 g, 57.1%) as a yellow oil. LCMS (ES+) 364.8 [M+H]+, RT 1.20 minutes (method 3).
  • 9
  • [ 100644-66-4 ]
  • [ 1616415-43-0 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine / 1,4-dioxane / 49 h / 80 - 100 °C 2: hydrogenchloride / 1,4-dioxane / 72 h
  • 10
  • [ 2101563-96-4 ]
  • [ 100644-66-4 ]
  • [ 2101563-63-5 ]
YieldReaction ConditionsOperation in experiment
18% With N-ethyl-N,N-diisopropylamine In ethanol at 80℃; for 4h; 7 8-(6-amino-1-methyl-1H-pyrazolo[3,4-d]pyrimidin-4-yl)-3-[5-methoxy-6-(trifluoromethyl)pyridin-2-yl]-1,2,6,9,9a-hexahydropyrazino[1,2-d][1,2,4]triazin-4-one To a solution of Intermediate 30 (0.18 g, 0.77 mmol) in EtOH (20 mL) were added DIPEA (0.38 mL, 2.33 mmol) and 4-chloro-l-methyl-lH-pyrazolo[3,4-d]- pyrimidin-6-amine (WO 2014/096423; 0.21 g, 1.16 mmol). The reaction mixture was heated at 80°C for 4 h, then diluted with water (20 mL) and extracted with EtOAc (3 x 20 mL). The organic layer was separated, dried over anhydrous Na2S04 and concentrated in vacuo. The crude residue was purified by flash column chromatography (5% DCM in MeOH) to afford the title compound (0.06 g, 18%) as an off-white solid. δΗ (400 MHz, DMSO-d6) 8.05 (s, 1H), 7.78 (d, 1H, J 9.0 Hz), 7.68 (d, 1H, J 9.0 Hz), 6.24 (s, 2H), 6.02- 6.10 (m, 1H), 4.44-4.62 (m, 2H), 4.33 (d, 1H, J 12.9 Hz), 3.92 (s, 3H), 3.71 (s, 3H), 3.60- 3.68 (m, 1H), 3.40-3.50 (m, 1H), 2.95-3.24 (m, 4H). MS (ESI) m/z [M+H]+ 479.00.
  • 11
  • [ 2101564-00-3 ]
  • [ 100644-66-4 ]
  • [ 2101564-03-6 ]
  • [ CAS Unavailable ]
YieldReaction ConditionsOperation in experiment
1: 22% 2: 64% With N-ethyl-N,N-diisopropylamine In ethanol at 100℃; for 12h; 9 cis- and trans-8-(6-amino-1-methyl-1H-pyrazolo[3,4-d]pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)-1-methyl-1,2,6,7,9,9a-hexahydropyrazino[1,2-d][1,2,4]triazin-4-one To a solution of Intermediate 32 (0.10 g, 0.34 mmol) in EtOH (10 mL) was added DIPEA (0.17 mL, 1.03 mmol), followed by 4-chloro-l-methyl-lH-pyrazolo[3,4-d]- pyrimidin-6-amine (WO 2014/096423; 0.09 g, 0.51 mmol). The reaction mixture was heated at 100°C for 12 h, then cooled to r.t. and concentrated in vacuo. The residue was diluted with DCM (20 mL) and filtered, then the filtrate was concentrated in vacuo. The crude residue was purified by column chromatography (gradient of 0-4% MeOH in DCM) to afford the title compound as a 3: 1 trans cis isomer mixture. The two isomers were separated by HPLC (polar organic method). (0482) The cis isomer, the first eluting peak (34 mg, 22%>), was obtained as an off-white solid. LCMS (method 5) purity 97.6%. δΗ (400 MHz, DMSO-d6) 7.98 (s, IH), 7.26 (m, 2H), 6.82 (d, IH, J 8.4 Hz), 6.24 (s, 2H), 5.72 (d, IH, J 10.5 Hz), 4.50-4.70 (m, 2H), 4.35 (d, IH, J 12.9 Hz), 3.74 (s, 3H), 3.70 (s, 3H), 3.20-3.30 (m, 2H), 3.05 (dd, J 17.2, 7.9 Hz, IH), 2.92-2.81 (m, 2H), 2.12 (s, 3H), 1.25 (d, 3H, J 6.4 Hz). MS (ESI) mlz [M+H]+ 438.00. (0483) The trans isomer, the second eluting peak (95 mg, 64%>), was obtained as an off- white solid. LCMS (method 5) purity 96.6%. δΗ (400 MHz, DMSO-d6) 7.98 (s, IH), 7.26 (m, 2H), 6.82 (d, J 8.4 Hz, IH), 6.24 (s, 2H), 5.93 (d, 1H, J7.6 Hz), 4.50-4.60 (m, 2H), 4.35 (d, IH, J 12.9 Hz), 3.74 (s, 3H), 3.70 (s, 3H), 3.44-3.54 (m, 2H), 3.20-3.30 (m, 2H), 2.92-3.00 (m, 1H), 2.12 (s, 3H), 1.16 (d, 3H, J 6.4 Hz). MS (ESI) mlz [M+H]+ 438.00. (0484) The cis isomer (23.8 mg) was resolved by chiral preparative HPLC (column: Chiralpak AS-V, 50 mm x 490 mm, 20 μιη; eluent: 50% heptane and 50% ethanol containing 0.1% diethylamine modifier; flow rate: 80 mL/minute; temperature: 30°C; wavelength: 220 nm) to furnish (li?,9ai?)-8-(6-amino-l-methyl-lH-pyrazolo[3,4-(i]- pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)-l-methyl-l,2,6,7,9,9a-hexahydro- pyrazino [ 1 ,2-d] [ 1 ,2,4]triazin-4-one and ( 15',9a5)-8-(6-amino- 1 -methyl- lH-pyrazolo [3 ,4- ]pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)- 1 -methyl- 1 ,2,6,7,9,9a-hexahydro- pyrazino[l,2-d][l,2,4]triazin-4-one. First eluting enantiomer (Isomer 1; 10.3 mg, ee (0485) 100%)): LCMS (method 5) purity 93.8%>. Second eluting enantiomer (Isomer 2; 10.3 mg, ee 99.2%): LCMS (method 5) purity 96.3%. 1H NMR and LCMS data of both isomers were identical to the racemic sample. (0486) The trans isomer (84 mg) was resolved by chiral preparative HPLC (column: Chiralpak AS-V, 50 mm x 490 mm, 20 μιη; eluent: 50% heptane and 50% ethanol containing 0.1% diethylamine modifier; flow rate: 80 mL/minute; temperature: 30°C; wavelength: 220 nm) to furnish (15',9ai?)-8-(6-amino-l-methyl-lH-pyrazolo[3,4-(i]- pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)-l-methyl-l,2,6,7,9,9a-hexahydro- pyrazino[l,2-d][l,2,4]triazin-4-one and (li?,9aS)-8-(6-amino-l-methyl-lH-pyrazolo[3,4- ]pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)- 1 -methyl- 1 ,2,6,7,9,9a-hexahydro- pyrazino[l,2-d][l,2,4]triazin-4-one. First eluting enantiomer (Isomer 1; 36 mg, ee 100%)): LCMS (method 5) purity 97.5%. Second eluting enantiomer (Isomer 2; 41.9 mg, ee 96.1%): LCMS (method 5) purity 99.4%. 1H NMR and LCMS data of both isomers were identical to the racemic sample.
  • 12
  • [ 100644-66-4 ]
  • [ 2101564-03-6 ]
  • [ 2101563-66-8 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine / ethanol / 12 h / 100 °C 2: diethylamine / ethanol; n-heptane / 30 °C / Resolution of racemate
  • 13
  • [ 100644-66-4 ]
  • [ 2101563-67-9 ]
  • [ 2101564-04-7 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine / ethanol / 12 h / 100 °C 2: diethylamine / ethanol; n-heptane / 30 °C / Resolution of racemate
  • 14
  • [ 2101563-90-8 ]
  • [ 100644-66-4 ]
  • [ 2101563-55-5 ]
YieldReaction ConditionsOperation in experiment
17% With N-ethyl-N,N-diisopropylamine In butan-1-ol at 110℃; for 2.5h; 1 8-(6-amino-1-methylpyrazolo[3,4-d]pyrimidin-4-yl)-3-(4-methoxyphenyl)-1,2,6,7,9,9a-hexahydropyrazino[1,2-d][1,2,4]triazin-4-one To a solution of Intermediate 27 (300 mg, 0.83 mmol) in 1-butanol (8 mL) were added 4-chloro-l -methyl- IH-pyrazolo [3, 4- ]pyrimidin-6-amine (WO 2014/096423; 164 mg, 0.89 mmol) and DIPEA (694 mg, 5.37 mmol). The stirred reaction mixture was heated at 110°C for 2.5 h. After cooling, the reaction mixture was concentrated to dryness and the residue was suspended in EtOAc (40 mL). The suspension was washed with saturated aqueous sodium bicarbonate solution (2 x 10 mL). A precipitate, which formed at the junction of the phases, was removed by filtration (after the second sodium bicarbonate wash), then washed with water (0.5 mL) and EtOAc (2 mL). The isolated solid was purified by preparative HPLC (basic method 1) to furnish the title compound (62 mg, 17%) as a colourless solid. δΗ (500 MHz, DMSO-d6) 8.03 (s, 1H), 7.37-7.43 (m, 2H), 6.80-6.86 (m, 2H), 6.22 (s, 2H), 5.90 (dd, 1H, J 8.9, 5.4 Hz), 4.57 (br s, 1H), 4.51 (br s, 1H), 4.33 (td, 1H, J 13.1, 2.7 Hz), 3.72 (s, 3H), 3.71 (s, 3H), 3.61 (ddd, 1H, J 10.4, 7.1, 3.4 Hz), 3.43 (dt, 1H, J 13.7, 5.6 Hz), 3.18 (t, 1H, J 10.9 Hz), 3.06 (s, 1H), 3.00 (dt, 1H, J 14.7, 8.2 Hz), 2.86-2.95 (m, 1H). LCMS (ES+) 410 [M+H]+, RT 1.43 minutes (method 1).
  • 15
  • [ 2101563-90-8 ]
  • [ 100644-66-4 ]
  • [ 2101563-56-6 ]
  • [ 2101563-57-7 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine / butan-1-ol / 2.5 h / 110 °C 2: LUX A2 column / ethanol / Resolution of racemate
  • 16
  • [ 2101563-94-2 ]
  • [ 100644-66-4 ]
  • [ 2101563-59-9 ]
  • [ 2101563-60-2 ]
YieldReaction ConditionsOperation in experiment
1: 2.9% 2: 4% With N-ethyl-N,N-diisopropylamine In butan-1-ol at 110℃; for 3.5h; 3 (9aS)-8-(6-amino-1-methyl-1H-pyrazolo[3,4-d]pyrimidin-4-yl)-3-(4-methoxy-3-methylphenyl)-1,2,6,7,9,9a-hexahydropyrazino[1,2-d][1,2,4]triazin-4-one DIPEA (3.8 mL, 22 mmol) was added to a suspension of Intermediate 29 (1.25 g, 3.58 mmol) and 4-chloro-l-methyl-lH-pyrazolo[3,4-2S04. The organic fraction was evaporated onto silica and purified by flash column chromatography (gradient of 3-10% MeOH in EtOAc). The second eluting material was triturated from EtOAc and filtered, then washed with EtOAc and isohexane. The residue was evaporated to dryness. The resulting cream-coloured solid (410 mg) was further purified by preparative HPLC (basic method 2), then freeze-dried from acetonitrile/water, to yield the title compound (44 mg, 2.9%) as a white solid. Analytical data matched those obtained for Example 2
  • 17
  • [ 100644-66-4 ]
  • [ 2499490-14-9 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 3 steps 1: potassium carbonate; tetrakis(triphenylphosphine) palladium(0) / water; 1,4-dioxane / 120 °C / Inert atmosphere; Sealed tube 2: caesium carbonate; tetra-(n-butyl)ammonium iodide / tetrahydrofuran / 5 h / 75 °C 3: hydrogenchloride / isopropyl alcohol / 20 °C
  • 18
  • [ 100644-66-4 ]
  • [ 2499488-12-7 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: potassium carbonate; tetrakis(triphenylphosphine) palladium(0) / water; 1,4-dioxane / 120 °C / Inert atmosphere; Sealed tube 2: caesium carbonate; tetra-(n-butyl)ammonium iodide / tetrahydrofuran / 5 h / 75 °C
  • 19
  • [ 760990-08-7 ]
  • [ 100644-66-4 ]
  • [ 2499490-18-3 ]
YieldReaction ConditionsOperation in experiment
With tetrakis(triphenylphosphine) palladium(0); potassium carbonate In 1,4-dioxane; water at 120℃; Inert atmosphere; Sealed tube; Step A: A solution of 12a (19 mg, 0.1 mmol) and 2-fluoro-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenol (30 mg, 0.12 mmol) in dioxane (3 mL) was treated with Pd(PPh3)4 (12 mg, 0.01 mmol), potassium carbonate (55 mg, 0.4 mmol) and water (0.5 mL), briefly sparged with nitrogen, sealed and heated to 120 C overnight. The reaction was filtered and the solid was washed with isopropanol and water and dried to afford 12b; ESIMS calcd. for C14H15FN5O (M+H+) 260.1, found 260.1
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