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CAS No. : | 1074-86-8 | MDL No. : | MFCD01632221 |
Formula : | C9H7NO | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | JFDDFGLNZWNJTK-UHFFFAOYSA-N |
M.W : | 145.16 | Pubchem ID : | 333703 |
Synonyms : |
4-formyl Indole;NSC 337264
|
Chemical Name : | 1H-Indole-4-carbaldehyde |
Num. heavy atoms : | 11 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.0 |
Num. rotatable bonds : | 1 |
Num. H-bond acceptors : | 1.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 43.69 |
TPSA : | 32.86 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.11 cm/s |
Log Po/w (iLOGP) : | 1.24 |
Log Po/w (XLOGP3) : | 1.51 |
Log Po/w (WLOGP) : | 1.98 |
Log Po/w (MLOGP) : | 0.88 |
Log Po/w (SILICOS-IT) : | 2.69 |
Consensus Log Po/w : | 1.66 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -2.23 |
Solubility : | 0.853 mg/ml ; 0.00588 mol/l |
Class : | Soluble |
Log S (Ali) : | -1.81 |
Solubility : | 2.26 mg/ml ; 0.0156 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -3.21 |
Solubility : | 0.0897 mg/ml ; 0.000618 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 1.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.05 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H317-H319 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With 4-methylmorpholine N-oxide In dichloromethane at 20℃; for 1 h; Molecular sieve | Tetrapropylammonium perruthenate (0.3 g, 0.85 mmol) was added in portions to a mixture of alcohol product from Step A (2.5 g, 17 mmol), N-methylmorpholine N-oxide (3.0 g, 25 mmol) and 4 A molecular sieves (3.0 g) in anhydrous methylene chloride (30 mL) at room temperature. The mixture was stirred at room temperature under nitrogen for 1 h and then filtered. The filtrate was concentrated in vacuo, and the residue was purified by chromatography (SiO2, CH2Cl2) to provide indole-4-aldehyde as a white powder (2.0 g, 80percent): 1H NMR (300 MHz, CDCl3) δ10.2 (s, 1H), 8.52 (br s, 1H), 7.64-7.69 (m, 2H), 7.31-7.44 (m, 3H), CI MS m/z=146 [C9H7NO+H]+. |
53% | Stage #1: With Dess-Martin periodane In dichloromethane for 1 h; Stage #2: With water In diethyl ether; dichloromethane; water |
b) lH-Indole-4-carbaldehyde; Dess-Martin periodane (1.04 g, 2.46 mmol) was dissolved into anhydrous CH2Cl2 (10 ml). (lH-Indol-4-yi)-methanol (449 mg, 3.07 mmol) in anhydrous CH2Cl2 (10 ml) was added and the mixture was stirred for 1 h. Sodium hydroxide (50ml of IN solution) and ether (50 ml) were added and the reaction was stirred for 30 min. The organic layer was separated and washed with water (10 ml), brine (10 ml), dried over MgSO4, filtered and concentrated to a thick brown oil. Purification by column chromatography (silica gel, gradient elution of 2percent MeOH/CH2Cl2 to 5percent MeOH/CH2Cl2) gave lH-indole-4- <n="163"/>carbaldehyde (235 mg, 53percent) as a yellow solid: 1HNMR (300 MHz, DMSOd6) 5 11.59 (bs, IH), 10.18 (s, IH), 7.78-7.75 (m, IH), 7.66-7.60 (m, 2H), 7.33-7.28 (m, IH), 7.08 (d, J = 3.0 Hz, IH). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With 4-methylmorpholine N-oxide In dichloromethane | Step B: Tetrapropylammonium perruthenate (0.3 g, 0.85 mmol) was added in portions to a mixture of alcohol product from Step A (2.5 g, 17 mmol), N-methylmorpholine N-oxide (3.0 g, 25 mmol) and 4 A molecular sieves (3.0 g) in anhydrous methylene chloride (30 mL) at room temperature. The mixture was stirred at room temperature under nitrogen for 1 h and then filtered. The filtrate was concentrated in vacuo, and the residue was purified by chromatography (SiO2, CH2Cl2) to provide indole-4-aldehyde as a white powder (2.0 g, 80percent): 1H NMR (300 MHz, CDCl3) δ 10.2 (s, 1H), 8.52 (br s, 1H), 7.64-7.69 (m, 2H), 7.31-7.44 (m, 3H); CI MS m/z=146 [C9H7NO+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | With sodium borohydrid; methylamine In methanol; water | Step C: To a solution of aldehyde product from Step B (2.0 g, 14 mmol) in methanol (100 mL), 40percent methylamine in water (2.27 mL, 27.6 mmol) was added at room temperature over a period of 10 min. The mixture was stirred at room temperature under nitrogen overnight and then was cooled down to 0° C. Sodium borohydride (1.05 g, 27.6 mmol) was added. The reaction mixture was slowly warmed to room temperature for 2 h. Most of methanol was removed in vacuo, and the residue was diluted with water and extracted (3*) with ether. The combined organic layers were extracted with 2 N HCl (100 mL). The HCl layer was made basic (pH~11) with 2 N NaOH and extracted (3*) with methylene chloride. The combined organic layers were washed with brine, dried over Na2SO4, and concentrated in vacuo to give crude 4-(aminomethyl)-indole as a white powder (1.95 g, 88percent): 1H NMR (300 MHz, CDCl3) δ 8.29 (s, br, 1H), 7.31 (d, J=8.0 Hz, 1H), 7.22 (t, J=2.7 Hz, 1H), 7.16 (t, J=8.0, 7.3 Hz, 1H), 7.08 (d, J=7.3 Hz, 1H), 6.64 (t, J=2.0 Hz, 1H), 4.06 (s, 2H), 2.51 (s, 3H); CI MS m/z=160 [C10H12N2+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | Stage #1: With sodium hydride In N,N-dimethyl-formamide at 20℃; for 0.666667 h; Stage #2: at 20℃; for 12 h; |
a) 1 -Methyl-lH-indole-4-carbaldehyde; To a solution of lH-indole-4-carbaldehyde (413 mg, 2.85 mmol) in anhydrous DMF (6.5 niL) was added sodium hydride (171 mg of 60percent dispersion in oil, 4.27 mmol). The mixture was stirred for 40 min at room temperature. Methyl iodide (0.36 mL, 5.78 mmol) was then added and the reaction mixture was stirred for 12 h at room temperature. Water was added (25 mL) and the mixture was extracted with ethyl acetate (3x 25 mL). Combined organic layers were washed with water (20 mL) and brine (20 mL), dried over Na2SO4, filtered and concentrated to a yellow oil. Purification by column chromatography (silica gel, CH2Cl2) gave l-methyl-lH-indole-4-carbaldehyde (452 mg g, 99percent) as a yellow oil: 1H NMR (400 MHz, DMSO-^) δ 10.20 (s, IH), 7.84 (d, J= 8.0 Hz, IH), 7.68 (d, J= 7.2 Hz, IH), 7.58 (d, J= 2.8 Hz, IH), 7.38-7.34 (m, IH), 7.08 (d, J= 3.2 Hz, IH), 3.87 (s, 3H). |
89% | Stage #1: With sodium hydride In N,N-dimethyl-formamide at 0℃; for 0.0833333 h; Inert atmosphere Stage #2: for 0.5 h; Inert atmosphere |
To the solution of 28 in dimethylformamide (DMF) maintained at 0 °C was added sodium hydride (NaH, 0.36 g, 10.32 mmol) and was stirred for 5 min before adding methylidodide (MeI, 0.44 mL, 8.25 mmol) and the reaction was stirred for 30 min. Reaction was quenched by slow addition of water at 0 °C and extracted using EtOAc (25 mL 3). The combined organic layer was collected, dried over anhydrous MgSO4 andconcentrated under reduced pressure to give a pale yellow residue,which was purified by silica gel chromatography (EtOAc: Hexane,4:1) to give 31 as off white residue in 89percent yield; 1H NMR (300 MHz,CDCl3): δ 3.89 (s, 3H), 7.26-7.28 (m, 2H), 7.38 (t, J=8.1 Hz, 1H), 7.46(t, J=8.1 Hz, 2H), 10.27 (s, 1H). |
70% | Stage #1: With caesium carbonate In acetonitrile at 60℃; for 2 h; Stage #2: at 60℃; for 1 h; |
General procedure: To a solution of indole-aldehyde (435mg 3mmol) in CH3CN (30mL) was added Cs2CO3 (829mg, 6mmol), and the mixture was refluxed for 2h. To this solution, alkyl halide (3.3mmol) was added, and the mixture was heated under reflux for 1h. After the completion of the reaction, the solvent was evaporated under reduced pressure and water was added to the reaction mixture and extracted 3 times for ethyl acetate. The combined organic layers were dried over Na2SO4 and concentrated under vacuum. The residue was purified by flash chromatography. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | Stage #1: With sodium hydride In N,N-dimethyl-formamide at 20℃; for 0.5 h; Stage #2: at 20℃; for 12 h; |
a) l-ethyl-lH-indole-4-carbaldehvde; <n="181"/>To a solution of lH-indole-4-carbaldehyde (2.00 g, 13.8 mmol) in anhydrous DMF (6.5 niL) was added sodium hydride (827 mg of 60percent dispersion in oil, 20.7 mmol). The mixture was stirred for 30 min at room temperature. Ethyl iodide (2.22 mL, 27.5 mmol) was then added and the reaction mixture was stirred for 12 h at room temperature. Water was added (100 mL) and the mixture was extracted with ethyl acetate (3x 100 mL). Combined organic layers were washed with brine (100 mL), dried over Na2SO4, filtered and concentrated to an orange oil. Purification by column chromatography (silica gel, gradient elution Of CH2Cl2 to 5percent MeOH/CH2Cl2) gave the title compound (1-ethyl-lH- indole-4-carbaldehyde) (2.43 g, 99percent) as a yellow oil: 1H NMR (300 MHz, OMSOd6) δ 10.19 (s, IH), 7.88 (d, J= 8.1 Hz, IH), 7.68-7.64 (m, 2H), 7.37-7.32 (m, IH), 7.08 (d, J= 3.0, IH), 4.28 (q, J= 7.2 Hz, 2H), 1.36 (t, J= 7.2 Hz, 3H). |
78% | Stage #1: With caesium carbonate In acetonitrile at 60℃; for 2 h; Stage #2: at 60℃; for 1 h; |
General procedure: To a solution of indole-aldehyde (435mg 3mmol) in CH3CN (30mL) was added Cs2CO3 (829mg, 6mmol), and the mixture was refluxed for 2h. To this solution, alkyl halide (3.3mmol) was added, and the mixture was heated under reflux for 1h. After the completion of the reaction, the solvent was evaporated under reduced pressure and water was added to the reaction mixture and extracted 3 times for ethyl acetate. The combined organic layers were dried over Na2SO4 and concentrated under vacuum. The residue was purified by flash chromatography. |
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