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[ CAS No. 163768-50-1 ] {[proInfo.proName]}

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Chemical Structure| 163768-50-1
Chemical Structure| 163768-50-1
Structure of 163768-50-1 * Storage: {[proInfo.prStorage]}
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Product Details of [ 163768-50-1 ]

CAS No. :163768-50-1 MDL No. :MFCD25976745
Formula : C40H67N5O8 Boiling Point : -
Linear Structure Formula :- InChI Key :LGNCNVVZCUVPOT-FUVGGWJZSA-N
M.W : 745.99 Pubchem ID :67472795
Synonyms :

Calculated chemistry of [ 163768-50-1 ]

Physicochemical Properties

Num. heavy atoms : 53
Num. arom. heavy atoms : 6
Fraction Csp3 : 0.72
Num. rotatable bonds : 25
Num. H-bond acceptors : 9.0
Num. H-bond donors : 3.0
Molar Refractivity : 210.87
TPSA : 157.82 Ų

Pharmacokinetics

GI absorption : Low
BBB permeant : No
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : Yes
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : Yes
Log Kp (skin permeation) : -9.03 cm/s

Lipophilicity

Log Po/w (iLOGP) : 3.68
Log Po/w (XLOGP3) : 2.57
Log Po/w (WLOGP) : 3.07
Log Po/w (MLOGP) : 0.84
Log Po/w (SILICOS-IT) : 4.86
Consensus Log Po/w : 3.0

Druglikeness

Lipinski : 2.0
Ghose : None
Veber : 2.0
Egan : 1.0
Muegge : 3.0
Bioavailability Score : 0.17

Water Solubility

Log S (ESOL) : -4.52
Solubility : 0.0226 mg/ml ; 0.0000303 mol/l
Class : Moderately soluble
Log S (Ali) : -5.53
Solubility : 0.00219 mg/ml ; 0.00000294 mol/l
Class : Moderately soluble
Log S (SILICOS-IT) : -5.87
Solubility : 0.001 mg/ml ; 0.00000135 mol/l
Class : Moderately soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 2.0
Synthetic accessibility : 7.09

Safety of [ 163768-50-1 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P280-P305+P351+P338 UN#:N/A
Hazard Statements:H302 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 163768-50-1 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 163768-50-1 ]

[ 163768-50-1 ] Synthesis Path-Downstream   1~35

  • 1
  • [ 163768-50-1 ]
  • (4-aminophenyl)arsenous acid [ No CAS ]
  • [ 920017-32-9 ]
YieldReaction ConditionsOperation in experiment
With N-ethoxycarbonyl-2-ethoxy-1,2-dihydroquinoline In chloroform for 2h; III.4; 19 [0477] To a solution of auristatin F (10 mg, 13 μmol) and p-aminoplienyl arsenoxide (3 mg, 16 μmol) in chloroform (200 μL) was added EEDQ (5 mg, 20 μmol). The reaction mixture was stirred for 2 hours before being concentrated by passing nitrogen gas over the reaction mixture. The resulting residue was dissolved in DMSO (0.5 mL) and purified via reverse-phase preparative chromatography (see infra). Product containing fractions were concentrated to give the 4.7 mg (35%) of the desired aldehyde: MS m/z (ES+), 929.5 (M+H).[0478] Preparative HPLC purifications was performed on a Varian instrument equipped with Cl 2 Phenomenex Synergy MAX-RP 4μ 250 x 21.2 mm reversed phase column, eluting with 0.05% formic acid in a water and acetonitrile gradient at a flow rate of 4.6 mL/min with a gradient of 10% organic for 3 min followed by a ramp up to 50% organic over 50 min.
  • 2
  • [ 581065-95-4 ]
  • [ 163768-50-1 ]
  • [ 76-05-1 ]
  • [ 1415329-56-4 ]
YieldReaction ConditionsOperation in experiment
To a solution of compound 23-3 (33mg, 0.102 mmol), compound 12-7 (40 mg, 0.051 mmol) and 54 mu^ of diisopropylethylamine in 1 mL of DMF was added 38 mg of HATU. The reaction mixture was stirred at room temperature for 4 hours. The reaction mixture was purified by HPLC to give 52 mg of compound 23-4. MS (ESI) m/z 525[M+2H], 1049[M+H].
  • 3
  • [ 163768-50-1 ]
  • C18H26N4O5*2ClH [ No CAS ]
  • [ 76-05-1 ]
  • 2C2HF3O2*C98H156N14O19 [ No CAS ]
YieldReaction ConditionsOperation in experiment
68% Stage #1: ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine; C18H26N4O5*2ClH With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide at 20℃; for 2h; Stage #2: trifluoroacetic acid 22 To a solution of compound 19-4 (7.6 mg, 0.017 mmol), compound 12-7 (40 mg, 0.051 mmol) and DIEA (0.030 mL, 0.17 mmol) in 2 mL of DMF was added 32 mg (0.085 mmol) of HATU. The reaction mixture was stirred at room temperature for 2 hour. The reaction mixture was purified by HPLC, eluting with 20-70% CH3CN/H20 in 20 min at 254 nm, to give 24 mg (68%) of compound 22-1. MS (ESI) m/z 612 [M+3H], 917 [M+2H], 1834[M+H].
  • 4
  • [ 50-00-0 ]
  • [ 745017-94-1 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
With sodium cyanoborohydride; acetic acid; In N,N-dimethyl-formamide; at 20℃; for 2h; To a solution of compound 12-6 in DMF was added formylaldehyde (3eq) and 20 eq of acetic acid, followed by addition of 2 eq of sodium cyanoborohydride. The resulting mixture was stirred at ambient temperature for 2 hours. The reaction mixture was diluted with water and purified by HPLC to give compound 12-7.
With sodium cyanoborohydride; acetic acid; In N,N-dimethyl-formamide; for 2h; To a solution of compound 12-6 in DMF was added formylaldehyde15 (3eq) and 20 eq of acetic acid, followed by addition of 2 eq of sodium cyanoborohydride. Theresulting mixture was stirred at ambient temperature for 2 hours. The reaction mixture was dilutedwith water and purified by HPLC to give compound 12-7.
  • 5
  • [ 163768-50-1 ]
  • [ 1415329-31-5 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine; HATU / N,N-dimethyl-formamide / 2 h / 20 °C 2: hydrazine / N,N-dimethyl-formamide / 1 h / 20 °C
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine; HATU / N,N-dimethyl-formamide / 2 h / 20 °C 2: hydrazine / N,N-dimethyl-formamide / 1 h / 20 °C
  • 6
  • [ 163768-50-1 ]
  • [ 1415328-85-6 ]
  • [ 1415328-86-7 ]
YieldReaction ConditionsOperation in experiment
70% With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide at 20℃; for 2h; 12 To a solution of compound 12-10 (20 mg, 0.026 mmol) in 1 mL of DMF was added 11.2 mg of compound 12-10, 15 mg of HATU and 23 μ^ of DIEA. The reaction mixture was stirred at room temperature for 2 hours. The reaction mixture was purified by HPLC to give 20 mg (70%>) of compound 12-4. MS (ESI) m/z 490 [M+2H], 978[M+H].
70% With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide at 20℃; for 2h; 12 Compound 12-11: To a solution of compound 12-10 (20 mg, 0.026 mmol) in 1 mL ofDMF was added 11.2 mg of compound 12-10, 15 mg of HATU and 23 IlL of DIEA. The reactionmixture was stirred at room temperature for 2 hours. The reaction mixture was purified by HPLC togive 20 mg (70%) of compound 12-4. MS (ESI) m/z 490 [M+2H], 978[M+H].
  • 7
  • [ 7524-50-7 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 6 steps 1: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 2: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 3: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 4: water; lithium hydroxide / methanol / 2 h / 20 °C 5: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 6: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
  • 8
  • [ 1415246-54-6 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 6 steps 1: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 2: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 3: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 4: water; lithium hydroxide / methanol / 2 h / 20 °C 5: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 6: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
Multi-step reaction with 6 steps 1: HATU / N,N-dimethyl-formamide / 4 h / 20 °C 2: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 3: HATU; 4-methyl-morpholine / N,N-dimethyl-formamide / 4 h / 20 °C 4: lithium hydroxide / 2 h / 20 °C 5: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 6: acetic acid; sodium cyanoborohydride / N,N-dimethyl-formamide / 2 h
  • 9
  • [ 1415246-55-7 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 5 steps 1: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 2: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 3: water; lithium hydroxide / methanol / 2 h / 20 °C 4: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 5: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
Multi-step reaction with 5 steps 1: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 2: HATU; 4-methyl-morpholine / N,N-dimethyl-formamide / 4 h / 20 °C 3: lithium hydroxide / 2 h / 20 °C 4: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 5: acetic acid; sodium cyanoborohydride / N,N-dimethyl-formamide / 2 h
  • 10
  • [ 1415246-58-0 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 4 steps 1: 4-methyl-morpholine; HATU / N,N-dimethyl-formamide / 4 h / 20 °C 2: water; lithium hydroxide / methanol / 2 h / 20 °C 3: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 4: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
Multi-step reaction with 4 steps 1: HATU; 4-methyl-morpholine / N,N-dimethyl-formamide / 4 h / 20 °C 2: lithium hydroxide / 2 h / 20 °C 3: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 4: acetic acid; sodium cyanoborohydride / N,N-dimethyl-formamide / 2 h
  • 11
  • [ 1415246-61-5 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 3 steps 1: water; lithium hydroxide / methanol / 2 h / 20 °C 2: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 3: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
Multi-step reaction with 3 steps 1: lithium hydroxide / 2 h / 20 °C 2: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 3: acetic acid; sodium cyanoborohydride / N,N-dimethyl-formamide / 2 h
  • 12
  • [ 1369427-27-9 ]
  • [ 163768-50-1 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 2: sodium cyanoborohydride; acetic acid / N,N-dimethyl-formamide / 2 h / 20 °C
Multi-step reaction with 2 steps 1: hydrogenchloride / 1,4-dioxane / 2 h / 20 °C 2: acetic acid; sodium cyanoborohydride / N,N-dimethyl-formamide / 2 h
  • 13
  • [ 581065-95-4 ]
  • [ 163768-50-1 ]
  • trifluoroacetic acid [ No CAS ]
YieldReaction ConditionsOperation in experiment
52 mg With N-ethyl-N,N-diisopropylamine; HATU; In N,N-dimethyl-formamide; at 20℃; for 4h; To a solution of compound 23-3 (33mg, 0.102 mmol), compound 12-7(40 mg, 0.051 mmol) and 54 ~tL of diisopropylethylamine in 1 mL of DMF was added 38 mg ofHATU. The reaction mixture was stirred at room temperature for 4 hours. The reaction mixture was10 purified by HPLC to give 52 mg of compound 23-4. MS (ESI) m/z 525[M+2H], 1049[M+H].
  • 14
  • [ 163768-50-1 ]
  • [ 1415659-11-8 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 3 steps 1.1: HATU; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: dmap; diisopropyl-carbodiimide / 0.17 h / 0 °C / Cooling 2.2: 18 h / 23 °C 3.1: trifluoroacetic acid / dichloromethane / 1 h / 23 °C
Multi-step reaction with 3 steps 1.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: diisopropyl-carbodiimide; dmap / dichloromethane / 0.17 h / 0 °C 2.2: 18 h / 23 °C 3.1: trifluoroacetic acid / dichloromethane / 1 h / 23 °C
  • 15
  • [ 163768-50-1 ]
  • [ 1415659-10-7 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1.1: HATU; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: dmap; diisopropyl-carbodiimide / 0.17 h / 0 °C / Cooling 2.2: 18 h / 23 °C
Multi-step reaction with 2 steps 1.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: diisopropyl-carbodiimide; dmap / dichloromethane / 0.17 h / 0 °C 2.2: 18 h / 23 °C
  • 16
  • [ 163768-50-1 ]
  • [ 156-87-6 ]
  • [ 1415659-09-4 ]
YieldReaction ConditionsOperation in experiment
68% With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide at 23℃; for 0.75h; 17 Synthesis of Auristatin F-hydroxypropylamide Auristatin F (150 mg, 0.201 mmol), HATU (153.0 mg, 0.402 mmol), and20 diisopropylethylamine (1 08 flL, 0.603 mmol) were taken up in DMF (5 mL) and 3-aminopropan-1-ol ( 45.9 flL, 0.603 mmol) was added. The mixture was stirred at 23 °C for 45 minutes at which time LCMS analysis showed complete disappearance of the startingmaterial. Reduction of the volume to 1.4 mL under high vacuum followed by purification viapreparative HPLC (1 0-90 solvent B gradient over 20 minutes eluting with 0.1 %TFA/Water,0.1% TF A/CH3CN) to give the title compound as white solid; 109 mg, 68 %yield.
68% With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide at 23℃; for 0.75h; 48 Auristatin F (150 mg, 0.201 mmol), HATU (153.0 mg, 0.402 mmol), and diisopropylethylamine (108 μL, 0.603 mmol) were taken up in DMF (5 mL) and 3-aminopropan-1-ol (45.9 μL, 0.603 mmol) was added. The mixture was stirred at 23° C. for 45 minutes at which time LCMS analysis showed complete disappearance of the starting material. Reduction of the volume to 1.4 mL under high vacuum followed by purification via preparative HPLC (10-90 solvent B gradient over 20 minutes eluting with 0.1% TFA/Water, 0.1% TFA/CH3CN) afforded the title compound as white solid (109 mg, 68% yield).
  • 17
  • [ 163768-50-1 ]
  • [ 1353016-71-3 ]
  • C58H78N6O10 [ No CAS ]
YieldReaction ConditionsOperation in experiment
In N,N-dimethyl acetamide;pH 7.5; Fig. 13 shows the synthesis of an antibody conjugate via the phosphamide linkers containing two function groups, wherein one group is linked to a cytotoxic agent, MMAF for targeted killing, and the other one is linked to a fluorochrome group for monitoring the interaction of the conjugate with a targeted cell.
  • 18
  • [ 163768-50-1 ]
  • 1-aminopropan-2-yl-auristatin-F trifluoroacetate [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1.1: benzotriazol-1-ol; diisopropyl-carbodiimide / dichloromethane / 0.17 h / 0 °C 1.2: 45 °C / Sealed tube 2.1: dichloromethane / 0.5 h / 23 °C
  • 19
  • [ 163768-50-1 ]
  • (S)-2-hydroxypropylamide auristatin-F trifluoroacetate [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate / N,N-dimethyl-formamide / 0.33 h 2.2: 20 °C
  • 20
  • [ 163768-50-1 ]
  • [ 1415659-17-4 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: diisopropyl-carbodiimide; dmap / dichloromethane / 20 °C / Cooling with ice 2: trifluoroacetic acid / dichloromethane / 2 h / 20 °C / Cooling
  • 21
  • [ 163768-50-1 ]
  • [ 1415659-13-0 ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.75 h / 23 °C 2.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate / N,N-dimethyl-formamide / 0.33 h 2.2: 20 °C
  • 22
  • [ 163768-50-1 ]
  • tert-butyl 2-hydroxypropylcarbamate [ No CAS ]
  • 1-(tert-butoxycarbonylamino)propan-2-yl-auristatin F [ No CAS ]
YieldReaction ConditionsOperation in experiment
Stage #1: ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine With benzotriazol-1-ol; diisopropyl-carbodiimide In dichloromethane at 0℃; for 0.166667h; Stage #2: tert-butyl 2-hydroxypropylcarbamate In dichloromethane at 45℃; Sealed tube; 39 To Auristatin F (150.0 mg, 0.201 mmol) and HOBt (32.6 mg, 0.241 mmol) in 5 mL dichloromethane was added diisopropylcarbodiimide (68.5 μL, 0.442 mmol). The mixture was stirred at 0° C. for 10 minutes at which point a precipitate was observed. tert-Butyl-2-hydroxypropylcarbamate (881.0 mg, 5.03 mmol) in 2 mL dichloromethane was added. The reaction mixture was stirred at 45° C. in a sealed vial and the progress of the reaction monitored via LCMS. Additional HOBt (30.0 mg, 0.222 mmol) was added at 2.5 and 6 hours and the mixture stirred for 18 hours. Additional HOBt (54.3 mg, 0.402 mmol) and diisopropylcarbodiimide (43.1 mg, 0.342 mmol) were added and the mixture stirred at 45° C. for an additional 9 hours at which time LCMS analysis showed complete disappearance of the starting material. The solvent was removed under reduced pressure and the residue dissolved in 3 mL DMF. The sample was purified via preparatory HPLC; (10-90 solvent B gradient over 10 minutes, eluting with 0.1% TFA/Water, 0.1% TFA/CH3CN). The water was removed via lyophilization to give the title compound as a white solid. (1348) 1-(Tert-butoxycarbonylamino)propan-2-yl-auristatin F (150 mg, 0.166 mmol) was taken up in dichloromethane (5 mL) and 2,2,2-trifluoroacetic acid (0.256 mL, 3.32 mmol) was added. The mixture was stirred at 23° C. for 30 minutes at which time LC/MS indicated complete conversion. The solvent was reduced to 1 mL under reduced pressure. Dropwise addition of the solution to stirring diethyl ether gave the title compound (27.5 mg, 0.027 mmol. 16%) as a white solid which was collected via filtration.
  • 23
  • [ 163768-50-1 ]
  • [ 58885-58-8 ]
  • [ 76-05-1 ]
  • (x)C2HF3O2*C48H82N6O10 [ No CAS ]
YieldReaction ConditionsOperation in experiment
89% Stage #1: ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine; N-tert-butoxycarbonyl-3-aminopropanol With dmap; diisopropyl-carbodiimide In dichloromethane at 20℃; Cooling with ice; Stage #2: trifluoroacetic acid In water; acetonitrile 64 To a solution of auristain F (100 mg, 0.134 mmol) in DCM (5 ml) cooled in an ice/salt bath was added DIC (0.052 ml, 0.335 mmol), tert-butyl 3-hydroxypropylcarbamate (117 mg, 0.670 mmol) and DMAP (82 mg, 0.670 mmol) and the resulting mixture was stirred cold for 2 h and then overnight at room temperature. The reaction mixture was purified by HPLC followed by lyophilized to give the tert-butyl carbamate protected title compound as a white amorphous solid (121 mg, 89% yield) M/z=903.5. (1406) To an ice cold solution of the tert-butyl carbamate protected title compound 2,2,2-trifluoroacetate (121 mg, 0.119 mmol) in DCM (4 ml) was added TFA (500 μl, 6.49 mmol) and the resulting mixture was stirred cold for 1 h and then at room temperature for 1 h. After removal of the excess TFA, the title compound was isolated by precipitation into ethyl ether as a white amorphous solid (109 mg, 93% yield); M/z=803.4.
  • 24
  • [ 163768-50-1 ]
  • [ 660-88-8 ]
  • auristatin F-C5 [ No CAS ]
YieldReaction ConditionsOperation in experiment
84% Stage #1: ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide at 20℃; for 0.666667h; Stage #2: 5-aminopentanoic acid In N,N-dimethyl-formamide at 20℃; for 4h; 50 Auristatin F (0.1 g, 0.116 mmol) and HATU (40 mg, 0.104 mmol) was dissolved in DMF (3 ml) and DIPEA (40 μΙ) was added to it. The reaction mixture was stirred at room temperature for 40 min and then added dropwise to a solution of 5- Aminovaleric acid (15 mg, 0.127 mmol) in DMF (2 ml). The reaction mixture was stirred at room temperature for 4h and evaporated in vacuo. The crude product was purified on Biotage flash purification system using C18 column to yield the compound Auristatin F-Cs acid 87 as a white solid (85 mg, 84%). LC-MS ESI m/z 867.5 [M+Na]+
  • 25
  • [ 163768-50-1 ]
  • [ 660-88-8 ]
  • C49H79N7O11 [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1.1: N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 0.67 h / 20 °C 1.2: 4 h / 20 °C 2.1: N-ethyl-N,N-diisopropylamine / N,N-dimethyl-formamide / 1 h / 20 °C
  • 26
  • [ 163768-50-1 ]
  • [ 107-18-6 ]
  • (S)-allyl 2-((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutanamido)-N,3-dimethylbutanamido)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropanamido)-3-phenylpropanoate [ No CAS ]
YieldReaction ConditionsOperation in experiment
71% With dmap; carbon dioxide; diallyl dicarbonate at 0 - 20℃; for 2.25h; 45 Example 45:Preparation of drug-linker compounds with quaternized auristatin F incorporating glucuronide units Auristatin F C-terminal protection:The round bottom flask was charged with auristatin F 184 (150 mg, 201 μmol) and dissolved in allyl alcohol (10 mL).The reaction was cooled to 0 & lt; 0 & gt; C and allyl pyrocarbonate (149 mg, 804 [mu] mol) was added followed by DMAP (7.3 mg, 60 [mu] mol).The reaction spewed CO2 intensely and slowed after 15 minutes.The reaction was stirred for 2 hours at RT and then analyzed by UPLC, resulting in> 90% conversion.The reaction was concentrated in vacuo and the crude was purified by silica gel chromatography (0-25% MeOH). Concentrate the parts in dry conditionA solution of 111 mg (71%) of (S) -allyl 2 - ((2R, 3R) -3 - ((S) -1 - ((3R, 4S, 5S) -4- (S) -2- (dimethylamino) -3-methylbutane2-yl) -3-methoxy-2-methylpropanamido) -3- (2-pyridyl) Phenylpropanoate (185).
  • 27
  • [ 163768-50-1 ]
  • C24H48N6O7SSi2 [ No CAS ]
  • C64H113N11O14SSi2 [ No CAS ]
YieldReaction ConditionsOperation in experiment
With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide 20 Example 20: (S)-N-((3R,4S,5S)-1-((S)-2-((7S,10R,11R)-7-benzyl-2-hydroxy-2,10-dimethyl- 6,9-dioxo-12-oxa-5,8-diaza-2-silatridecan-11-yl)pyrrolidin-1-yl)-3-methoxy-5-methyl-1- oxoheptan-4-yl)-2-((S)-2-(dimethylamino)-3-methylbutanamido)-N,3-dimethylbutanamide Example 20: (S)-N-((3R,4S,5S)-1-((S)-2-((7S,10R,11R)-7-benzyl-2-hydroxy-2,10-dimethyl- 6,9-dioxo-12-oxa-5,8-diaza-2-silatridecan-11-yl)pyrrolidin-1-yl)-3-methoxy-5-methyl-1- oxoheptan-4-yl)-2-((S)-2-(dimethylamino)-3-methylbutanamido)-N,3-dimethylbutanamide [00139] The title compound can be prepared according to the scheme shown below.
  • 28
  • [ 163768-50-1 ]
  • (S)-N-((3R,4S,5S)-1-((S)-2-((7S,10R,11R)-7-benzyl-2-hydroxy-2,10-dimethyl-6,9-dioxo-12-oxa-5,8-diaza-2-silatridecan-11-yl)pyrrolidin-1-yl)-3-methoxy-5-methyl-1-oxoheptan-4-yl)-2-((S)-2-(dimethylamino)-3-methylbutanamido)-N,3-dimethylbutanamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine; HATU / N,N-dimethyl-formamide 2: 4-(2-hydroxyethyl)piperazine-1-ethanesulfonic acid sodium salt / dimethyl sulfoxide; water / pH 5
  • 29
  • [ 163768-50-1 ]
  • [ 144222-22-0 ]
  • C51H87N7O9 [ No CAS ]
  • auristatin F piperidinyl amide [ No CAS ]
YieldReaction ConditionsOperation in experiment
1: 95.9 %Chromat. 2: 4.1 %Chromat. With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide for 1h; Cooling with ice; Overall yield = 100 %; Overall yield = 44.5 mg; 6.6.25.6.25.1 6.25.1. Synthesis of the ligand AF-pip (L8) Auristatin F (AF) (30.0 mg, 40 pmol, 1.0 eq.), dissolved in DMF (1.00 mL), was added to tert- butyl 4-(aminomethyl)piperidine-l-carboxylate (22.9 mg, 60 pmol, 1.5 eq). HATU (12.9 mg, 60 pmol, 1.5 eq.) and DIPEA (13.96 pL, 101 pmol, 2.5 eq.) were subsequently added and the mixture was stirred for 1 h in an ice bath. The reaction mixture was concentrated, dissolved in water/MeCN (3.5: 1, 3 mL), and filtered through a 0.2 pm syringe filter. Purification was performed by preparative reverse-phase HPLC (Grace Alltima C18 5 pm column, 22 x 250 mm; gradient: 20 to 100% MeCN/0.1% TFA in water/0.1% TFA in 36 min). Product fractions were concentrated resulting in a colorless solid (44.5 mg, quant.). HPLC (Grace Alltima C18 5 mih column, 25 x 4.6 mm) indicated that the product compound L8-Boc was 100.0% pure (95.9% compound L8-Boc: retention time 14.9 min and 4.1% Boc- deprotected compound compound L8: retention time 9.3 min; gradient: 20 to 100% MeCN/0.l% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). The obtained compound L8-Boc was dissolved in DCM (2 mL) and TFA (2 mL) was added. The mixture was stirred for 45 min at room temperature, followed by concentration under reduced pressure. The residue was dissolved in 10% MeOH/DCM (2 mL) and loaded on an ISOLUTE SCX-2 column, pre-washed with DCM (10 mL). The column was washed with 10% MeOH/DCM (20 mL), and the product was eluted with 1 M methanolic ammonia in DCM (1 : 1). The combined product fractions were concentrated and co-evaporated with MeOH several times to remove traces of ammonia affording a colorless solid (22.7 mg, 63.0% yield). (0440) HPLC (Grace Alltima C18 5 mih column, 25 x 4.6 mm) indicated that the product was 100% pure (retention time 9.3 min; gradient: 20 to 100% MeCN/0.1% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). HRMS (ESI+) C46H81N7O7 [M+2H]2+ calc 421.8093, found 421.8071
  • 30
  • [ 163768-50-1 ]
  • [ 144222-22-0 ]
  • auristatin F piperidinyl amide [ No CAS ]
YieldReaction ConditionsOperation in experiment
22.7 mg Stage #1: ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine; tert-butyl 4-(aminomethyl)piperidine-1-carboxylate With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide for 1h; Cooling with ice; Stage #2: With trifluoroacetic acid In dichloromethane at 20℃; for 0.75h; 6.6.25.6.25.1 6.25.1. Synthesis of the ligand AF-pip (L8) Auristatin F (AF) (30.0 mg, 40 pmol, 1.0 eq.), dissolved in DMF (1.00 mL), was added to tert- butyl 4-(aminomethyl)piperidine-l-carboxylate (22.9 mg, 60 pmol, 1.5 eq). HATU (12.9 mg, 60 pmol, 1.5 eq.) and DIPEA (13.96 pL, 101 pmol, 2.5 eq.) were subsequently added and the mixture was stirred for 1 h in an ice bath. The reaction mixture was concentrated, dissolved in water/MeCN (3.5: 1, 3 mL), and filtered through a 0.2 pm syringe filter. Purification was performed by preparative reverse-phase HPLC (Grace Alltima C18 5 pm column, 22 x 250 mm; gradient: 20 to 100% MeCN/0.1% TFA in water/0.1% TFA in 36 min). Product fractions were concentrated resulting in a colorless solid (44.5 mg, quant.). HPLC (Grace Alltima C18 5 mih column, 25 x 4.6 mm) indicated that the product compound L8-Boc was 100.0% pure (95.9% compound L8-Boc: retention time 14.9 min and 4.1% Boc- deprotected compound compound L8: retention time 9.3 min; gradient: 20 to 100% MeCN/0.l% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). The obtained compound L8-Boc was dissolved in DCM (2 mL) and TFA (2 mL) was added. The mixture was stirred for 45 min at room temperature, followed by concentration under reduced pressure. The residue was dissolved in 10% MeOH/DCM (2 mL) and loaded on an ISOLUTE SCX-2 column, pre-washed with DCM (10 mL). The column was washed with 10% MeOH/DCM (20 mL), and the product was eluted with 1 M methanolic ammonia in DCM (1 : 1). The combined product fractions were concentrated and co-evaporated with MeOH several times to remove traces of ammonia affording a colorless solid (22.7 mg, 63.0% yield). (0440) HPLC (Grace Alltima C18 5 mih column, 25 x 4.6 mm) indicated that the product was 100% pure (retention time 9.3 min; gradient: 20 to 100% MeCN/0.1% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). HRMS (ESI+) C46H81N7O7 [M+2H]2+ calc 421.8093, found 421.8071
  • 31
  • [ 163768-50-1 ]
  • tert-butyl 4-(12-amino-3-oxo-7.10-dioxa-2.4-diazadodecyl)piperidine-1-carboxylate [ No CAS ]
  • tert-butyl 4-((15S,18R,19R)-15-benzyl-19-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutanamido)-N,3-dimethylbutanamido)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-18-methyl-3,14,17-trioxo-7,10,20-trioxa-2,4,13,16-tetraazahenicosyl)piperidine-1-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
85% With N-ethyl-N,N-diisopropylamine; HATU In N,N-dimethyl-formamide for 1.5h; Cooling with ice; 6.6.13.6.13.1 6.13.1. Synthesis of the ligand AF-PEG2-urea-pip (L7) Auristatin F (AF) (40.0 mg, 54 pmol, 1.0 eq.), dissolved in DMF (1.33 mL), was added to tert- butyl 4-(l2-amino-3 -oxo-7, lO-dioxa-2, 4-diazadodecyl)piperi dine- l-carboxylate (62.5 mg, 161 pmol, 3.0 eq.; synthesis is described in Sijbrandi el a/. , Cancer Res. 2017, 72, 257-267) in DMF (1 mL). HATU (40.8 mg, 107 pmol, 2.0 eq.) and DIPEA (29 pL, 161 pmol, 3.0 eq.) were subsequently added and the mixture was stirred for 1.5 h in an ice bath. The reaction mixture was concentrated, dissolved in water/MeCN (3.5: 1, 3 mL), and filtered through a 0.2 mih syringe filter. Purification was performed by preparative reverse-phase HPLC (Grace Alltima C18 5 mih column, 22 x 250 mm; gradient: 30 to 50% MeCN/0.1% TFA in water/0.1% TFA in 36 min). Product fractions were concentrated under reduced pressure resulting in a colorless solid (56 mg, 85% yield). HPLC (Grace Alltima C18 5 mih column, 25 x 4.6 mm) indicated that the product compound L7-Boc was 100% pure (retention time 19.8 min; gradient: 5 to 50% MeCN/0.1% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). HRMS (ESI+) C5SHIO2N9OI2 [M+H]+ calc 1116.7642, found 1116.7774 The obtained compound L7-Boc was dissolved in DCM (2 mL) and TFA (2 mL) was added. The mixture was stirred for 45 min at room temperature, followed by concentration under reduced pressure. The residue was dissolved in 10% MeOH/DCM (2 mL) and loaded on an ISOLUTE SCX-2 column, pre- washed with DCM (10 mL). The column was washed with 10% MeOH/DCM (20 mL), and the product was eluted with 1 M methanolic ammonia in DCM (1 : 1). The combined product fractions were concentrated under reduced pressure and co- evaporated with MeOH several times to remove traces of ammonia affording a colorless solid (34 mg, 73% yield). HPLC (Grace Alltima C18 5 pm column, 25 x 4.6 mm) indicated that the product was 99% pure (retention time 9.2 min; gradient: 20 to 100% MeCN/0.1% TFA in water/0.1% TFA in 20 min measured at a wavelength of 210 nm). FIRMS (ESI+) C53H94N9O10 [M+H]+ calc 1016.7118, found 1016.6976
With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide; acetonitrile at 0 - 4℃; for 0.333333h;
  • 32
  • [ 163768-50-1 ]
  • tert-butyl 4-(12-amino-3-oxo-7.10-dioxa-2.4-diazadodecyl)piperidine-1-carboxylate [ No CAS ]
  • N-(3-oxo-1-(piperidin-4-yl)-7,10-dioxa-2,4-diazadodecan-12-yl)-auristatin F amide [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: N-ethyl-N,N-diisopropylamine; HATU / N,N-dimethyl-formamide / 1.5 h / Cooling with ice 2: trifluoroacetic acid / dichloromethane / 0.75 h / 20 °C
  • 33
  • [ 6066-82-6 ]
  • [ 163768-50-1 ]
  • C44H70N6O10 [ No CAS ]
YieldReaction ConditionsOperation in experiment
With dicyclohexyl-carbodiimide In dichloromethane 17 EXAMPLE 17 SYNTHESIS OF NHS ACTIVATED AURISTATIN F (AF-NHS) Auri statin F was converted to an NHS activated using standard coupling conditons as indicated in the reaction scheme above.
  • 34
  • [ 163768-50-1 ]
  • [ 220298-96-4 ]
  • tert-butyl (4-((2-((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionamido)-3-phenylpropionamido)methyl)phenyl)carbamate [ No CAS ]
YieldReaction ConditionsOperation in experiment
9.0 mg With benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; benzotriazol-1-ol; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 0 - 20℃; 1.1 Step 1: Synthesis of tert-butyl (4-((2-((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5 methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionamido)-3-phenylpropionamido)methyl)phenyl)carbamate. At room temperature, 1-hydroxybenzotriazole (2.0 mg, 14.74 μmol) was dissolved in N,N-dimethylformamide (4 mL), cooled to 0°C., and then tert-butyl 4-methylaminobenzyl carbamate (4.0 mg, 16.1 μmol), N,N-diisopropylethylamine (8.5 mg, 66.8 μmol), ((2R,3R)-3-((S)-1-((3R,4S,5S)-4-((S)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutyrylamino)-3-methoxy-5-methylheptanoyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropionyl)-L-phenylalanine (10.0 mg, 13.5 μmol, commercially available) were successively added. After being stirred for 5 min, 1H-benzotriazol-1-yl-oxytripyrrolidinophosphonium hexafluorophosphate (10.0 mg, 20.1 μmol) was added thereto, and stirred at 0°C. for 1 h. The reaction of raw materials was monitored by high performance liquid chromatography-mass spectrometry. After the raw materials were consumed up, the reaction solution was purified by preparative liquid chromatography (method D) to obtain the title compound (9.0 mg of white solid). [0286] ESI-MS (m/z): 950.5 [M+H] +.
  • 35
  • [ 163768-50-1 ]
  • [ 220298-96-4 ]
  • (2S)-N-((3R,4S,5S)-1-((2S)-2-((1R,2R)-3-((1-((4-aminobenzyl)amino)-1-oxo-3-phenylpropan-2-yl)amino)-1-methoxy-2-methyl-3-propionyl)pyrrolidin-1-yl)-3-methoxy-5-methyl-1-heptanoyl-4-yl)-2-((S)-2-(dimethylamino)-3-methylbutyrylamino)-N,3-dimethylbutanamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
Multi-step reaction with 2 steps 1: benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; benzotriazol-1-ol / N,N-dimethyl-formamide / 0 - 20 °C 2: hydrogenchloride / 1,4-dioxane / 3 h / 0 - 20 °C
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