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CAS No. : | 38136-70-8 | MDL No. : | MFCD29917326 |
Formula : | C16H17N3O2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | RYFZBPVMVYTEKZ-KBPBESRZSA-N |
M.W : | 283.33 | Pubchem ID : | 181567 |
Synonyms : |
Cyclo(L-Pro-L-Trp);Cyclo-L-tryptophyl-L-proline;cyclo-(L-Trp-L-Pro)
|
Num. heavy atoms : | 21 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.38 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 2.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 86.61 |
TPSA : | 65.2 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | Yes |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | Yes |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.96 cm/s |
Log Po/w (iLOGP) : | 1.87 |
Log Po/w (XLOGP3) : | 1.51 |
Log Po/w (WLOGP) : | 0.44 |
Log Po/w (MLOGP) : | 0.97 |
Log Po/w (SILICOS-IT) : | 2.14 |
Consensus Log Po/w : | 1.39 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -2.73 |
Solubility : | 0.524 mg/ml ; 0.00185 mol/l |
Class : | Soluble |
Log S (Ali) : | -2.49 |
Solubility : | 0.922 mg/ml ; 0.00326 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -4.33 |
Solubility : | 0.0133 mg/ml ; 0.000047 mol/l |
Class : | Moderately soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 0.0 |
Synthetic accessibility : | 2.85 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In water; at 130℃; for 4h;Autoclave; | General procedure: L- or D-Amino acid methyl ester hydrochloride (0.5 g, 3.6 mmol) was dissolved in 10 mL of dimethylformamide (DMF). Then, diisopropylethylamine (DIEA; 0.78 g, 6.0 mmol), various L- or D-N-Boc-amino acids (3.0 mmol) and O-(benzotriazol-1-yl)-N,N,N,N-tetramethyluronium hexafluorophosphate (HBTU; 1.37 g, 3.6 mmol) were added. After reaction at room temperature for 12 hours while stirring, DMF was removed from the reaction mixture under reduced pressure. The remaining mixture was diluted with ethyl acetate and washed with sodium bicarbonate and brine. The organic layer was concentrated under reduced pressure after removing water with anhydrous sodium sulfate. The concentrate was purified by silica column chromatography (EtOAc/hexane) to obtain a linear N-Boc-dipeptide. The linear N-Boc-dipeptide was added to a round-bottom flask and 20 mL of water added per 1 mmol of the linear N-Boc-dipeptide. Thereafter, the reaction vessel was fixed to a stainless-steel sterilization apparatus equipped with a pressure control valve. The sterilization apparatus was closed and the temperature of the reaction mixture was maintained at 130 °C for 4 hours. After stopping the reaction by lowering temperature, the pressure of the sterilization apparatus was decreased. After removing water under reduced pressure, the remaining concentrate was purified by silica column chromatography (MeOH/MC) to obtain a pure 2,5-diketopiperazine derivative. Nuclear magnetic resonance spectroscopic data of the prepared compounds are given below. They agree well to the data available from literatures. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With triethylamine; In dichloromethane; at 25℃; for 15h; | To a solution of N-(t-Boc)-L-Trp-L-ProNH2 (0.60 g, 1.50 mmol) in DCM (10 mL) was added trifluoroacetic acid (5 mL) at 0° C. After 1 h the solution was concentrated under reduced pressure. The crude residue was dissolved in DCM (10 mL) and Et3N (0.5 mL) was added. This solution was stirred at 25° C. for 15 h then washed with saturated NH4Cl (2.x.20 mL), brine (20 mL), dried (Na2SO4), and concentrated under reduced pressure. Flash chromatography on silica gel (EtOAc/MeOH) gave the title compound (Compound 3) (20 mg, 55percent) as a white solid: 1H NMR (CDCl3) d 1.8-2.1 (m, 3H), 2.28-2.4 (m, 1H), 2.97 (dd, 1H, J=10.8, 15.0 Hz), 3.5-3.7 (m, 2H), 3.75 (dd, 1H, J=3.3, 15.0 Hz), 4.07 (bt, 1H, J=7.2 Hz), 4.3-4.45 (m, 1H), 5.79 (bs, 1H), 7.0-7.3 (m, 3H), 7.39 (d, 1H, J=8.1 Hz), 7.59 (d, J=7.8 Hz), 8.47 (bs, 1H); 13C NMR (CDCl3) delta 22.6, 26.8, 28.3, 45.4, 54.5, 59.2, 109.8, 111.6, 118.4, 119.9, 122.7, 123.4, 126.7, 136.6, 165.5, 169.3; GC-MS m/z 283 (M+, 5), 186 (6), 154 (7), 130 (100). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dmap; triethylamine; In dichloromethane; | General procedure: Inseparable mixture of Tryprostatin B and Fumitremorgin C (4+5) or Brevianamide F (6) (0.015mmol), triethyl amine (0.042 mL, 0.03 mmol), 4-dimethylaminopyridine (0.367 mg, 0.003 mmol) were dissolved in dichloromethane (0.5 mL) with continuous stirring. After 10 minutes of stirring at room temperature, di-t-butyl dicarbonate (6.55 mg, 0.03 mmol) was dissolved in 0.5 mL of dichloromethane and added gradually to the reaction mixture. The reaction was stirred overnight and the resulting solution was washed with a saturated solution of sodium carbonate (2 × 2 mL) and water(2 × 2 mL) and the organic phase was dried over MgSO4. The solvent was removed, re-dissolved in MeOH and purified using preparative HPLC to give 4a, 5a, and 6a using the same aforementioned conditions. |