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[ CAS No. 16879-02-0 ] {[proInfo.proName]}

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Chemical Structure| 16879-02-0
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Product Details of [ 16879-02-0 ]

CAS No. :16879-02-0 MDL No. :MFCD00006278
Formula : C5H4ClNO Boiling Point : -
Linear Structure Formula :- InChI Key :CLNNBQDAAGDAHI-UHFFFAOYSA-N
M.W : 129.54 Pubchem ID :85621
Synonyms :

Calculated chemistry of [ 16879-02-0 ]

Physicochemical Properties

Num. heavy atoms : 8
Num. arom. heavy atoms : 6
Fraction Csp3 : 0.0
Num. rotatable bonds : 0
Num. H-bond acceptors : 1.0
Num. H-bond donors : 1.0
Molar Refractivity : 32.07
TPSA : 32.86 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : Yes
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.35 cm/s

Lipophilicity

Log Po/w (iLOGP) : 1.36
Log Po/w (XLOGP3) : 1.04
Log Po/w (WLOGP) : 1.03
Log Po/w (MLOGP) : 0.85
Log Po/w (SILICOS-IT) : 2.23
Consensus Log Po/w : 1.3

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 1.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -1.85
Solubility : 1.82 mg/ml ; 0.014 mol/l
Class : Very soluble
Log S (Ali) : -1.32
Solubility : 6.19 mg/ml ; 0.0478 mol/l
Class : Very soluble
Log S (SILICOS-IT) : -2.51
Solubility : 0.4 mg/ml ; 0.00309 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 1.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.52

Safety of [ 16879-02-0 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 16879-02-0 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 16879-02-0 ]
  • Downstream synthetic route of [ 16879-02-0 ]

[ 16879-02-0 ] Synthesis Path-Upstream   1~15

  • 1
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  • [ 2402-78-0 ]
Reference: [1] Recueil des Travaux Chimiques des Pays-Bas, 1951, vol. 70, p. 182,190
  • 2
  • [ 17228-64-7 ]
  • [ 16879-02-0 ]
Reference: [1] Heterocycles, 1993, vol. 36, # 2, p. 323 - 328
[2] Journal of Organic Chemistry, 1993, vol. 58, # 17, p. 4742 - 4744
  • 3
  • [ 4645-11-8 ]
  • [ 16879-02-0 ]
Reference: [1] Recueil des Travaux Chimiques des Pays-Bas, 1951, vol. 70, p. 182,190
  • 4
  • [ 2402-78-0 ]
  • [ 16879-02-0 ]
Reference: [1] Organic and Biomolecular Chemistry, 2004, vol. 2, # 2, p. 246 - 256
  • 5
  • [ 17228-64-7 ]
  • [ 3385-94-2 ]
  • [ 16879-02-0 ]
Reference: [1] Heterocycles, 1993, vol. 36, # 2, p. 323 - 328
  • 6
  • [ 16879-02-0 ]
  • [ 6515-38-4 ]
Reference: [1] Recueil des Travaux Chimiques des Pays-Bas, 1951, vol. 70, p. 182,190
  • 7
  • [ 16879-02-0 ]
  • [ 74-88-4 ]
  • [ 17228-64-7 ]
Reference: [1] Journal of the Chemical Society, Perkin Transactions 2: Physical Organic Chemistry (1972-1999), 1985, p. 1423 - 1428
  • 8
  • [ 16879-02-0 ]
  • [ 74-88-4 ]
  • [ 17228-63-6 ]
YieldReaction ConditionsOperation in experiment
67% With potassium carbonate In acetone at 20℃; for 16 h; Heating / reflux To a solution of 6- chloropyridin-2-ol (10.00 g, 77.19 mmol) in acetone (350 mL) was added K2CO3 (37.34 g, 270.2 mmol) and iodomethane (17.37 ml, 270.2 mmol). The reaction mixture was stirred at room temperature for 1 hour and then at reflux for 16 hours. The reaction mixture was cooled to room temperature and the K2CO3 was filtered off and washed with acetone. The filtrate was then concentrated and the residue was partitioned between H2O and CH2Cl2. The phases were separated, and the aqueous phase was re-extracted with CH2Cl2 (Ix). The combined CH2Cl2 layers were dried (Na2SO4), filtered and concentrated to yield a yellow oil. The crude product <n="128"/>111-03-PCT - P2338R1 - 02120.004WO1127 was purified by silica gel flash column chromatography, eluting with 10:1 CH2Cl2/EtOAc. The desired product (7.38 g, 67percent) was obtained as a white solid. 1H-NMR (400 MHz, CDCl3) δ 7.23 (dd, IH), 6.50 (dd, IH), 6.30 (m, IH), 3.69 (s, 3H). LRMS (ESI pos) m/e 144 (M+l).
59% With potassium carbonate In acetoneReflux [00179] To a mixture of 6-chloropyridin-2-ol (10.0 g, 77.5 mmol) and K2C03 (37.4 g, 271.3 mmol) in acetone (100 mL) was added iodomethane (38.5 g, 271.3 mmol) and the reaction was heated to reflux overnight. The reaction mixture was cooled to RT and the insoluble materials filtered. The solvent was concentrated in vacuo and the residue was partitioned between H20 and DCM. The organic layer was dried and concentrated. The solids were slurried in diethyl ether at RT for 30 min, filtered, washed with ether and dried to give 6.5 g (59percent) of the title compound. 1H NMR (400 MHz, MeOD-d4): δ 3.73 (s, 3H), 6.51-6.59 (m, 2H), 7.45-7.49 (m, 1H). [M+H] Calc'd for C6H6C1N0, 144; Found, 144.
1.96 g With potassium carbonate In acetone at 20℃; for 5 h; 96.1
6-Chloro-1-methyl-1H-pyridin-2-one
To a suspension of 6-chloro-2-pyridinol (3 g) in acetone (116 mL) was added potassium carbonate (11.2 g) and methyl iodide (4.92 mL) and the mixture was stirred for 5 h at RT.
It was filtered off and the filtrate was concentrated in vacuo.
The crude was purified by CC (Hept/EtOAc 8/2 to 0/1) to give 1.96 g of the titled compound as a white solid.
LC-MS (B): tR=0.39 min; [M+H]+: 144.14
Reference: [1] Heterocycles, 2000, vol. 52, # 1, p. 253 - 260
[2] Patent: WO2007/146824, 2007, A2, . Location in patent: Page/Page column 126; 127
[3] Patent: WO2015/200843, , A1, . Location in patent: Paragraph 00179[3] Patent: , 2015, , . Location in patent: Paragraph 00179
[5] Patent: WO2012/114268, 2012, A1, . Location in patent: Page/Page column 101
[6] Patent: US2014/73651, 2014, A1, . Location in patent: Paragraph 0734;0735
[7] Journal of Organic Chemistry, 2015, vol. 80, # 1, p. 296 - 303
  • 9
  • [ 16879-02-0 ]
  • [ 74-88-4 ]
  • [ 17228-63-6 ]
YieldReaction ConditionsOperation in experiment
472 mg With potassium carbonate In ethanol at 70℃; for 18 h; [00404] Step a: A mixture of 6-chloropyridin-2(1H)-one (500 mg, 3.86 mmol), K2C03 (800 mg, 5.79 mmol), and methyl iodide (0.360 mL, 5.79 mmol) in EtOH (11.6 mL) was stirred for 18 h at 70 °C. The reaction mixture was allowed to cool to RT, the volatiles were removed under reduced pressure and the residue was suspended in water. The aq. layer was extracted with EtOAc (2 x). The combined organic layers were dried over Mg504, filtered, and the volatiles were removed under reduced pressure. The residue was purified by silica chromatography (0 to 10percent gradient of MeOH/DCM) to give 6-chloro- 1 -methylpyridin-2( 1H)-one (472 mg, 3.29 mmol). ‘H NMR (400 MHz, DMSO-d6) ö ppm 7.39 (dd, J=9.2, 7.3 Hz, 1 H), 6.49 (dd, J=7.3, 1.2 Hz, 1 H), 6.41 (dd, J=9.2, 1.1 Hz, 1 H), 3.55 (s, 3 H). MS m/z 144.0 (M+H).
Reference: [1] Organic and Biomolecular Chemistry, 2011, vol. 9, # 16, p. 5802 - 5808
[2] Chemical and Pharmaceutical Bulletin, 1985, vol. 33, # 6, p. 2313 - 2322
[3] Patent: WO2016/203405, 2016, A1, . Location in patent: Paragraph 00404
  • 10
  • [ 16879-02-0 ]
  • [ 1221171-70-5 ]
Reference: [1] Journal of Fluorine Chemistry, 2017, vol. 203, p. 155 - 165
  • 11
  • [ 16879-02-0 ]
  • [ 1221171-70-5 ]
Reference: [1] Patent: WO2012/93174, 2012, A1,
  • 12
  • [ 16879-02-0 ]
  • [ 1885-46-7 ]
  • [ 1214377-45-3 ]
YieldReaction ConditionsOperation in experiment
72% With potassium hydroxide In water; acetonitrile at 20℃; for 0.5 h; To a vigorously stirred solution of 2-chloro-6-hydroxypyridine(0.13 g, 1.0 mmol) in acetonitrile (2 mL) at room temperature was added a 6 M aqueous solution of potassium hydroxide (2 mL). Difluoromethyltriflate (0.38 mL, 3.0 mmol, 3 equiv.) was added dropwiseto the reaction mixture which was maintained at room temperature by means of a water bath (the reaction is exothermic), and the medium was stirred for 30 min. The mixture was diluted with water(20 mL) and extracted with diethyl ether (2 ×10 mL) and ethyl acetate(3 ×10 mL). The combined organic layers were dried over Na2SO4, filtered and evaporated under reduced pressure. The crude material was purified by column chromatography on silica gel with pentane/diethylether (100:0 to 70:30) as eluent to afford the pure title compound(129 mg, 72percent yield); 1H NMR (400 MHz, CDCl3): δ 7.62 (t, 1H,J = 7.9 Hz), 7.37 (t, 1H, J = 72.2 Hz), 7.07 (d, 1H, J = 7.9 Hz), 6.76(d, 1H, J = 8.0 Hz) ppm. 13C NMR (101 MHz, CDCl3): δ 158.3, 148.5,142.1, 120.1, 113.8 (t, J= 259 Hz), 109.6 ppm 19F NMR (376 MHz,CDCl3): δ −89.3 (d, 2F, J = 71.4 Hz) ppm. HRMS (ESI) calcd forC6H5ClF2NO [M + H]+: 180.002. Found: 180.000.
Reference: [1] Journal of Fluorine Chemistry, 2017, vol. 203, p. 155 - 165
  • 13
  • [ 16879-02-0 ]
  • [ 75-46-7 ]
  • [ 1214377-45-3 ]
YieldReaction ConditionsOperation in experiment
50%
Stage #1: With potassium hydroxide In water for 0.5 h;
Stage #2: at 20℃; for 3 h;
General procedure: Using an apparatus previously described for method B
[21]
, potassium hydroxide (2.52 g, 45 mmol, 15 equiv) and water (2.52 g) were added to the reaction vessel and the mixture was allowed to stir until the potassium hydroxide was almost completely dissolved.
Then, 2-bromo-3-pyridinol (0.354 g, 3 mmol) was added and the mixture stirred for 30 min, after which acetonitrile (10 mL) was added via syringe and the mixture stirred at room temperature.
Fluoroform was then bubbled slowly into the mixture for 2 h, after which the resulting mixture was stirred for one additional hour.
After being quenched with water and extracted with ethyl acetate, the ethyl acetate layer was washed with a saturated solution on sodium hydroxide, separated and concentrated.
Additional impurities were removed via column chromatography on silica gel using an 80:20 mixture of hexanes/methylene chloride to give a 53percent yield of the liquid product, 2-bromo-3-difluoromethoxypyridine (3d): 1H NMR: δ 8.27 (d, J = 5 Hz, 1H), 7.59 (d, J = 8 Hz, 1H), 7.26 (m, 1H) 6.59 (t, 2JHF = 72 Hz, 1H); 19F NMR: δ -82.1 (d, 2JFH = 72 Hz, 2F); 13C NMR: δ 146.5, 134.5, 128.3, 124.3, 116.33 (t, 1JCF = 260 Hz).
Reference: [1] Journal of Fluorine Chemistry, 2014, vol. 168, p. 34 - 39
  • 14
  • [ 16879-02-0 ]
  • [ 1895-39-2 ]
  • [ 1214377-45-3 ]
YieldReaction ConditionsOperation in experiment
53% With sodium hydroxide In N,N-dimethyl-formamide at 55℃; for 18 h; solution of 6-chloropyridin-2-ol (1.0 equiv.), sodium 2-chloro-2,2-difluoroacetate (2.0 equiv.) and sodium hydroxide (1.1 equiv.) in DMF (0.77 M) was heated at 55° C. for 18 hrs, the reaction mixture was then partitioned between EtOAc and sat. NaHCO3 solution, the aqueous was extracted by EtOAc for 3 more times, combined organic was washed by water and brine, dried over anhydrous sodium sulfate, concentrated in vacuo. The crude product was purified via silica gel to yield 2-chloro-6-(difluoromethoxy)pyridine in 53percent yield: LCMS (m/z): 180.0 (MH+), Rt=0.87 min. 1H NMR (400 M Hz, CHLOROFORM-d) δ ppm 7.69 (t, J=8.0 Hz, 1H), 7.44 (t, J=72 Hz, 1H), 7.14 (d, J=7.8 Hz, 1H), 6.83 (d, J=7.8 Hz, 1H).
Reference: [1] Patent: US2012/225061, 2012, A1, . Location in patent: Page/Page column 106
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  • [ 1214377-45-3 ]
Reference: [1] ChemMedChem, 2015, vol. 10, # 4, p. 715 - 726
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