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[ CAS No. 20986-40-7 ]

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Product Details of [ 20986-40-7 ]

CAS No. :20986-40-7 MDL No. :MFCD00040366
Formula : C8H8BrNO2 Boiling Point : -
Linear Structure Formula :- InChI Key :PCPIANOJERKFJI-UHFFFAOYSA-N
M.W :230.06 Pubchem ID :140785
Synonyms :

Calculated chemistry of [ 20986-40-7 ]

Physicochemical Properties

Num. heavy atoms : 12
Num. arom. heavy atoms : 6
Fraction Csp3 : 0.25
Num. rotatable bonds : 3
Num. H-bond acceptors : 3.0
Num. H-bond donors : 0.0
Molar Refractivity : 48.02
TPSA : 39.19 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : Yes
P-gp substrate : No
CYP1A2 inhibitor : Yes
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.28 cm/s

Lipophilicity

Log Po/w (iLOGP) : 1.91
Log Po/w (XLOGP3) : 2.01
Log Po/w (WLOGP) : 2.02
Log Po/w (MLOGP) : 1.4
Log Po/w (SILICOS-IT) : 2.2
Consensus Log Po/w : 1.91

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 0.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -2.7
Solubility : 0.454 mg/ml ; 0.00197 mol/l
Class : Soluble
Log S (Ali) : -2.46
Solubility : 0.798 mg/ml ; 0.00347 mol/l
Class : Soluble
Log S (SILICOS-IT) : -3.37
Solubility : 0.099 mg/ml ; 0.000431 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.7

Safety of [ 20986-40-7 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 20986-40-7 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 20986-40-7 ]
  • Downstream synthetic route of [ 20986-40-7 ]

[ 20986-40-7 ] Synthesis Path-Upstream   1~19

  • 1
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  • [ 113118-81-3 ]
Reference: [1] Journal of Medicinal Chemistry, 1995, vol. 38, # 10, p. 1608 - 1628
[2] Journal of Medicinal Chemistry, 1989, vol. 32, # 3, p. 583 - 593
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  • [ 38940-62-4 ]
Reference: [1] Patent: US2003/96829, 2003, A1,
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  • [ 38940-62-4 ]
Reference: [1] Patent: US2004/102472, 2004, A1, . Location in patent: Page 32
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  • [ 141-78-6 ]
  • [ 38940-62-4 ]
Reference: [1] Journal of the American Chemical Society, 1948, vol. 70, p. 2381,2383
  • 5
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  • [ 28733-43-9 ]
Reference: [1] Yakugaku Zasshi, 1931, vol. 51, p. 542,571; dtsch. Ref. S. 73, 76[2] Chem.Abstr., 1931, p. 5427
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YieldReaction ConditionsOperation in experiment
99%
Stage #1: Reflux
Stage #2: for 2 h; Reflux
Stage #3: With sodium hydrogencarbonate In dichloromethane; water
5-Bromonicotinic acid (2.66 g, 13.1 rnmol) in excess thionyl chloride (6 mL, 82.3 mmol) was brought to reflux conditions and left to stir overnight. The reaction mixture was cooled to room temperature, placed in an ice bath, and excess ethanol (7 tnL) was added to the mixture portion-wise, with stirring. The reaction mixture was returned to reflux conditions and stirred for 2 h. The solution was then cooled to room temperature and solvent removed en vacuo and redissolved in dichloromethane to produce a suspension. 10? NaHCO3 was added with stirring to obtain a pH = 8. The dichloromethane layer was removed and the aqueous layer was extracted 2 more times with dichloromethane. The organic fractions were combined, back extracted with water, extracted with brine, and dried over Na2SO4. After filtration, the solvent was removed in vacuo and used without further purification (2.99 g, 99percent yield) . 1H NMR (300 MHz, CDC13) ? ppm 9.04 {d, IH), 8.75 (d, IH), 8.34 (dd, IH), 4.35 {d, 3H) , 1.34 Ct, 2H) .
89% for 18 h; Inert atmosphere; Reflux; Cooling with ice To an ice-cool solution of 5-bromonicotinic acid (iS g, 75 mmol) in ethanol (2S0 mL) was added concentrated sulthric acid (4 mL) slowly drop wise and refluxed under argon for 18 h. Ethanol was removed under reduced pressure and resulting white residue was dissolved in water. The aqueous solution was made basic to pH 8 with sat. sodium bicarbonate and extracted with ethet The organic layer was washed with brine, dried over anhydrous MgSO4, and concentrated under diminished pressure afforded 1 as a pale yellow solid: yield1S.20 g (89percent); ‘H NMR (400 MHz, CDC13) ö 1.39 (t, 3H, J=7.2 Hz), 4.40 (q, 2H, J=7.6, 14.8 Hz), 8.40 (t, 1H, J=2.0 Hz), 8.81 (d, 1H, J=2.4 Hz) and 9.10 (d, 1H, J=1.6 Hz); ‘3C NMR (100 MHz, CDC13) ö 14.3, 62.0, 120.7, 127.6, 139.S, 149.0, 1S4.S and 164.1.
82% for 22.08 h; Heating / reflux EXAMPLE 1; 2-Amino-4-(5-cyano-pyridin-3-yl)-3-cyano-7-methyl-4H-pyrrolo[2,3-h]chromene; a) Ethyl 5-bromonicotinate:; To a white stirring suspension of 5-bromonicotinic acid (3.00 g, 14.9 mmol) in ethyl alcohol (30.0 mL) was added concentrated H2SO4 (9.0 mL) dropwise over 5 min to form a clear solution. The clear solution was then heated for 22 h, cooled to room temperature, quenched with water (30 mL) and then extracted with dichloromethane (75 mL). The organic layer was washed with 10percent Na2CO3 (20 mL), water (20 mL), dried over MgSO4, filtered through sintered glass and concentrated to yield 2.8 g (82percent) of the title compound as a white solid. 1H NMR (CDCl3): 9.13 (d, J=1.7 Hz, 1H), 8.84 (d, J=2.2 Hz, 1H), 8.42 (m, J=2.2, 1.7 Hz, 2H), 4.40 (q, J=7.1 Hz, 2H), 1.43 (t, J=7.1 Hz, 3H).
82% at 20℃; for 96 h; 20 ml (27 mmol) of thionyl chloride are added dropwise, at room temperature, to a solution of 10 g (49 mmol) of 5-bromonicotinic acid in 250 ml of ethanol. The reaction medium is stirred at room temperature for 4 days and then evaporated under vacuum. The residue is taken up in dichloromethane and washed with aqueous sodium carbonate solution. The organic phase is dried over sodium sulfate, filtered and evaporated under vacuum. The residue obtained is purified by chromatography on a column of silica eluted with a 7/3 heptane/ethyl acetate mixture. 9 g (82percent) of ethyl 5-bromonicotinate are obtained.

Reference: [1] Patent: WO2008/151073, 2008, A1, . Location in patent: Page/Page column 39-40; 44
[2] Journal of Organic Chemistry, 2001, vol. 66, # 12, p. 4115 - 4121
[3] Patent: US2016/375131, 2016, A1, . Location in patent: Paragraph 0080
[4] ACS Combinatorial Science, 2017, vol. 19, # 5, p. 286 - 298
[5] Organic Preparations and Procedures International, 1992, vol. 24, # 2, p. 143 - 146
[6] Patent: US2006/104998, 2006, A1, . Location in patent: Page/Page column 16
[7] Patent: WO2004/113331, 2004, A1, . Location in patent: Page 43
[8] Yakugaku Zasshi, 1931, vol. 51, p. 542,571; dtsch. Ref. S. 73, 76[9] Chem.Abstr., 1931, p. 5427
[10] Journal of Medicinal Chemistry, 1995, vol. 38, # 10, p. 1608 - 1628
[11] Patent: US2006/287522, 2006, A1, . Location in patent: Page/Page column 26
[12] Medicinal Chemistry Research, 2014, vol. 23, # 4, p. 2080 - 2092
[13] Patent: US2015/17201, 2015, A1, . Location in patent: Paragraph 0165
  • 7
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Reference: [1] Organic Letters, 2017, vol. 19, # 16, p. 4407 - 4410
  • 8
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YieldReaction ConditionsOperation in experiment
101% With thionyl chloride In 1,2-dichloro-ethane EXAMPLE 1
Ethyl 5-bromo-3-pyridinecarboxylate
To a slurry of 5-bromo-3-pyridinecarboxylic acid (100.0 g, 0.495 mol) in 1,2-dichloroethane (200 mL), thionyl chloride (108 mL, 1.485 mmol) was slowly added over a period of 30 min with intermittent cooling in an ice bath to maintain a temperature below 20° C.
The reaction mixture was allowed to warm to room temperature, and heated to reflux for 18 h.
The reaction mixture was cooled to 10° C., and additional thionyl chloride (14.7 g, 0.12 mmol) was added dropwise.
The reaction was warmed to reflux for 6 h, then allowed to cool to room temperature.
Residual thionyl chloride and solvent were removed by rotary evaporation followed by high vaccum to provide 5-bromo-3-pyridinecarbacyl chloride hydrochloride as a colorless solid (128 g, 101percent).
Reference: [1] Tetrahedron, 2002, vol. 58, # 22, p. 4429 - 4438
[2] Journal of the American Chemical Society, 1948, vol. 70, p. 2381,2383
[3] Bioorganic and Medicinal Chemistry Letters, 2005, vol. 15, # 19, p. 4308 - 4312
[4] Patent: US5723477, 1998, A,
[5] Patent: US5594011, 1997, A,
[6] Patent: US5703100, 1997, A,
[7] Patent: US5705512, 1998, A,
[8] Patent: US5677459, 1997, A,
  • 9
  • [ 625-92-3 ]
  • [ 64-17-5 ]
  • [ 201230-82-2 ]
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Reference: [1] Tetrahedron Letters, 1984, vol. 25, # 51, p. 5939 - 5942
  • 10
  • [ 20826-04-4 ]
  • [ 7664-93-9 ]
  • [ 20986-40-7 ]
Reference: [1] Patent: US6090812, 2000, A,
  • 11
  • [ 24242-19-1 ]
  • [ 64-17-5 ]
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Reference: [1] Journal of Medicinal Chemistry, 2015, vol. 58, # 8, p. 3593 - 3610
  • 12
  • [ 59-67-6 ]
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Reference: [1] Journal of the American Chemical Society, 1948, vol. 70, p. 2381,2383
  • 13
  • [ 39620-02-5 ]
  • [ 64-17-5 ]
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Reference: [1] Journal of the American Chemical Society, 1948, vol. 70, p. 2381,2383
[2] Justus Liebigs Annalen der Chemie, 1959, vol. 621, p. 106,119
[3] Bioorganic and Medicinal Chemistry Letters, 2005, vol. 15, # 19, p. 4308 - 4312
[4] Tetrahedron, 2002, vol. 58, # 22, p. 4429 - 4438
  • 14
  • [ 625-92-3 ]
  • [ 64-17-5 ]
  • [ 201230-82-2 ]
  • [ 20986-40-7 ]
  • [ 4591-56-4 ]
Reference: [1] Tetrahedron Letters, 1984, vol. 25, # 51, p. 5939 - 5942
  • 15
  • [ 98555-51-2 ]
  • [ 20986-40-7 ]
Reference: [1] Yakugaku Zasshi, 1931, vol. 51, p. 542,571; dtsch. Ref. S. 73, 76[2] Chem.Abstr., 1931, p. 5427
  • 16
  • [ 625-92-3 ]
  • [ 64-17-5 ]
  • [ 201230-82-2 ]
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  • [ 4591-56-4 ]
Reference: [1] Tetrahedron Letters, 1984, vol. 25, # 51, p. 5939 - 5942
  • 17
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  • [ 1970-81-6 ]
Reference: [1] Patent: EP2222686, 2015, B1,
  • 18
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  • [ 71719-06-7 ]
Reference: [1] Journal of Organic Chemistry, 2001, vol. 66, # 12, p. 4115 - 4121
[2] Journal of Organic Chemistry, 1998, vol. 63, # 4, p. 1109 - 1118
[3] Journal of Medicinal Chemistry, 1996, vol. 39, # 17, p. 3235 - 3237
[4] Journal of Organic Chemistry, 1982, vol. 47, # 21, p. 4165 - 4167
[5] Patent: US2016/375131, 2016, A1,
[6] ACS Combinatorial Science, 2017, vol. 19, # 5, p. 286 - 298
[7] Patent: WO2008/151073, 2008, A1,
  • 19
  • [ 20986-40-7 ]
  • [ 37669-64-0 ]
YieldReaction ConditionsOperation in experiment
60%
Stage #1: With sodium tetrahydroborate In methanol at 0℃; for 0.5 h;
Stage #2: With water In methanol
(5-bromopyridin-3-yl)methanol. To a cold (0° C.) solution of ethyl-5-bromonicotinate (1.0g, 4.3 mmoL) in MeOH (15mL) was added sodium borohydride (650 mg, 17 mmol) portion wise. After 30 min. the reaction was quenched by the addition of water (10 mL). The reaction was then extracted with methylene chloride (3x). The extracts were combined, dried (MgSO4) the filtrate was concentrated and purified by column chromatography on silica gel (0 to 80percent ethyl acetate/hexanes)to produce 475 mg (60percent) as a clear oil. 1H-NMR (CDCl3, 400 MHz) δ8.57 (s, 1H), 8.49 (s, 1H), 7.91 (s, 1H), 4.73 (s, 2H), 2.51 (s,br,1H). Mass spec.:188.12 (MH)+.
60% With sodium tetrahydroborate In methanol at 0℃; for 0.5 h; To a cold (00C) solution of ethyl-5- bromonicotinate ( 1.Og, 4.3 mmoL) in MeOH ( 15mL) was added sodium borohydride (650 mg, 17 mmol) portion wise. After 30 min. the reaction was quenched by the addition of water (10 mL). The reaction was then extracted with methylene chloride (3x). The extracts were combined, dried (MgSO4) the filtrate was concentrated and purified by column chromatography on silica gel (0 to 80percent ethyl acetate / hexanes)to produce 475 mg (60percent) as a clear oil. 1H-NMR (CDCl3, 400 MHz) δ 8.57 (s, IH), 8.49 (s, IH), 7.91 (s, IH), 4.73 (s, 2H), 2.51 (s,br,lH). Mass spec: 188.12 (MH)+.
58%
Stage #1: With lithium aluminium tetrahydride In tetrahydrofuran at -78 - 20℃; for 3.16 h;
Stage #2: With water In tetrahydrofuran
b)
(5-Bromo-pyridin-3-yl)-methanol

A clear solution of ethyl-5-bromonicotinate (2.80 g, 12.2 mmol) in THF (35 mL) was cooled to -78° C. and lithium aluminum hydride (LAH, 0.470 g, 12.2 mmol) was added in small portions over the next 10 min.
After stirring for 1 h at -78° C., the cold bath was removed.
The reaction mixture was stirred at room temperature for 2 h, quenched by the slow addition of water (5 mL), filtered through a layer of celite and washed with ethyl acetate (100 mL).
The organic layer was then dried over MgSO4, filtered through sintered glass and concentrated to yield 1.5 g (66percent) of a yellow oil residue.
The residue was purified by column chromatography (elution with EtOAC:hexanes, 1:1) and yielded 1.32 g (58percent) of the title compound as a yellow oil. 1H NMR (CDCl3): 8.48 (d, J=1.9 Hz, 1H), 8.39 (s, 1H), 7.88 (t, J=1.9 Hz, 1H), 4.69 (s, 2H).
54% at 0℃; for 0.666667 h; To a cold solution of ethyl 5-bromonicotinate (1.003 g, 4.36 mmol) in methanol (15 ml, 371 mmol) was added sodium borohydride (0.652 g, 17.23 mmol) portion wise on 10 min. The reaction was stirred for 30 min. at 0 °C. The reaction was quenched with water and extracted three times with CH2Cl2. The combined organic layers were dried on anh. Na2SO4 and concentrated. The residue was purified on ISCO using a 80g SILICYCLE® column (Hex/EtOAc) and afforded the title material (0.477 g, 54percent) as a clear oil. LC (Method B): 0.756 min. MS(ESI) calcd. for C6H7BrNO [M+H]+ m/z: 187.97; found: 190.0, 191.0. 1H NMR (400 MHz, acetone) δ ppm 8.50 - 8.58 (m, 2H) 7.93 - 7.98 (m, 1H) 4.67 - 4.74 (m, 2H) 4.48 - 4.56 (m, 1H)
50%
Stage #1: With sodium tetrahydroborate In methanol at 20℃; for 2 h; Heating / reflux
Stage #2: With sodium hydroxide In water
A solution of 9 g (40 mmol) of ethyl 5-bromo- nicotinate in 25 ml of methanol is added dropwise, at room temperature, to a suspension of 14.8 g (400 mmol) of sodium borohydride in 75 ml of methanol. After addition, the reaction medium is refluxed for 2 hours. The reaction medium is evaporated to dryness, taken up in aqueous sodium hydroxide solution to pH 9, and extracted with ethyl acetate. The organic phase is dried over magnesium sulfate, filtered and evaporated under vacuum. 3.7 g (50percent) of (5-bromopyrid-3-yl)- methanol are obtained.

Reference: [1] Patent: US2008/27056, 2008, A1, . Location in patent: Page/Page column 27
[2] Patent: WO2009/96941, 2009, A1, . Location in patent: Page/Page column 29
[3] Patent: US2006/104998, 2006, A1, . Location in patent: Page/Page column 16
[4] Patent: WO2013/163241, 2013, A1, . Location in patent: Paragraph 00148
[5] Journal of Organic Chemistry, 2008, vol. 73, # 9, p. 3497 - 3507
[6] Patent: WO2004/113331, 2004, A1, . Location in patent: Page 43-44
[7] Organic Preparations and Procedures International, 1992, vol. 24, # 2, p. 143 - 146
[8] Journal of Medicinal Chemistry, 1995, vol. 38, # 10, p. 1608 - 1628
[9] Patent: US6090812, 2000, A,
[10] Patent: US2006/287522, 2006, A1, . Location in patent: Page/Page column 26
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