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[ CAS No. 3709-98-6 ] {[proInfo.proName]}

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Chemical Structure| 3709-98-6
Chemical Structure| 3709-98-6
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Product Details of [ 3709-98-6 ]

CAS No. :3709-98-6 MDL No. :MFCD09907955
Formula : C6H8N2O2 Boiling Point : -
Linear Structure Formula :- InChI Key :CBXPKEZRCKCOID-UHFFFAOYSA-N
M.W : 140.14 Pubchem ID :520836
Synonyms :

Calculated chemistry of [ 3709-98-6 ]

Physicochemical Properties

Num. heavy atoms : 10
Num. arom. heavy atoms : 6
Fraction Csp3 : 0.33
Num. rotatable bonds : 1
Num. H-bond acceptors : 4.0
Num. H-bond donors : 2.0
Molar Refractivity : 35.85
TPSA : 66.24 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : No
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.45 cm/s

Lipophilicity

Log Po/w (iLOGP) : 1.59
Log Po/w (XLOGP3) : 0.99
Log Po/w (WLOGP) : 0.45
Log Po/w (MLOGP) : -0.52
Log Po/w (SILICOS-IT) : 0.68
Consensus Log Po/w : 0.64

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 1.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -1.71
Solubility : 2.73 mg/ml ; 0.0195 mol/l
Class : Very soluble
Log S (Ali) : -1.97
Solubility : 1.5 mg/ml ; 0.0107 mol/l
Class : Very soluble
Log S (SILICOS-IT) : -1.27
Solubility : 7.58 mg/ml ; 0.0541 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.86

Safety of [ 3709-98-6 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 3709-98-6 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 3709-98-6 ]
  • Downstream synthetic route of [ 3709-98-6 ]

[ 3709-98-6 ] Synthesis Path-Upstream   1~4

  • 1
  • [ 3599-89-1 ]
  • [ 105-53-3 ]
  • [ 3709-98-6 ]
YieldReaction ConditionsOperation in experiment
67%
Stage #1: With sodium methylate In methanol at 10 - 35℃; for 0.166667 h;
Stage #2: at 10 - 35℃; for 16 h;
Reference Example 29 Production of 2-ethylpyrimidine-4,6-diol To a solution of the compound of Reference Example 28 (11 g, 99 mmol) in methanol (20 mL) was added 28percent methanol solution (57 g, 296 mmol) of sodium methoxide, and the mixture was stirred at room temperature for 10 min. Diethyl malonate (15 mL, 99 mmol) was added dropwise thereto, and the mixture was further stirred at room temperature for 16 hr. The reaction mixture was concentrated under reduced pressure, and the residue was dissolved in water, and the solution was acidified with concentrated hydrochloric acid. The precipitated solid was collected by filtration, washed with water and diethyl ether and dried to give the title compound (9.3 g, 67percent) as white crystals. 1H NMR (300 MHz, DMSO-d6) δ:1.16 (3 H, t, J = 7.6 Hz), 2.36 - 2.60 (2 H, m), 5.03 (1 H, s), 11. 62 (2 H, br s).
67%
Stage #1: With sodium methylate In methanol at 20℃; for 0.166667 h;
Stage #2: at 20℃; for 16 h;
5.2
2-Ethylpyrimidine-4,6-diol (9)
To a solution of 8 (11 g, 99 mmol) in MeOH (20 mL) was added 28percent solution of NaOMe in MeOH (57 g, 296 mmol), and the mixture was stirred at room temperature for 10 min.
Diethyl malonate (15 mL, 99 mmol) was added dropwise, and the mixture was further stirred at room temperature for 16 h.
The reaction mixture was concentrated in vacuo, the residue was dissolved in water and acidified with concd HCl.
The precipitated solid was collected by filtration, washed with water and Et2O to give the title compound (9.3 g, 67percent) as a white solid. 1H NMR (DMSO-d6) δ 1.16 (3H, t, J = 7.6 Hz), 2.36-2.60 (2H, m), 5.03 (1H, s), 11.62 (2H, br s).
38%
Stage #1: With sodium In methanol for 0.25 h; Cooling with ice
Stage #2: at 20℃; for 4 h;
Sodium (1.27 g, 55.3 mmcl) was added to anhydrous methanol (50 mL) under ice bath. Once sodium was completely dissolved propionimidamide hydrochloride (2.00 g, 18.4 mmol)was added and the reaction mixture was stirred for 15 mm. Then diethyl malonate (3.80 g,23.9 mmcl) was added dropwise. The reaction mixture was warmed to ri and stirred for 4 hrs. The mixture was concentrated under vacuum. The resulting residue was dissolved in water (120 mL) and the solution was acidified with conc. HCI to pH = 5. The mixture was filtered and the solid was collected. The solid was successively washed with H20 (15 mL),isopropanol (10 ml) and PE (10 ml), and dried under vacuum to afford the title compound(0.96 g, yield: 38percent) as a white solid.1H NMR (300 MHz, DMSO-d6): ö 11.59(brs, 2H), 5.01 (s, IH), 2.46(q, J 7.8 Hz, 2H), 0.97(t, J = 7.8 Hz, 3H).LC-MS: 5-95percent CH3CN in 3 mm, Rt = 0.25 mm; MS Calcd.:140, MS Found: 141 [M+H].
Reference: [1] Patent: EP2471793, 2012, A1, . Location in patent: Page/Page column 48
[2] Bioorganic and Medicinal Chemistry, 2015, vol. 23, # 15, p. 4777 - 4791
[3] Patent: WO2017/12576, 2017, A1, . Location in patent: Page/Page column 77
  • 2
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  • [ 108-59-8 ]
  • [ 3709-98-6 ]
YieldReaction ConditionsOperation in experiment
96% With sodium methylate In methanol; water Part B1.
Preparation of 4,6-Dihydroxy-2-ethylpyrimidine according to Step (1)
To a cooled, stirred solution of 25percent sodium methoxide (1200 ml, 5.55 mole) was added a slurry of 200 g (1.85 mole) of propionamidine hydrochloride in 300 ml of methanol.
Next, 244 g (1.85 mole) of dimethyl malonate was added and the mixture was permitted to warm to about 20° C., after which it was stirred for 16 hours.
The mixture was evaporated in vacuo and water (about 2 l) was added.
This mixture was neutralized with concentrated hydrochloric acid to provide a white precipitate which was separated by filtration to provide 230 g (96percent) of 4,6-dihydroxy-2-ethylpyrimidine, m.p. 312°-215° C.
The structural assignment was confirmed by infrared and nuclear magnetic resonance spectral analyses.
Reference: [1] Patent: US4536579, 1985, A,
[2] Patent: WO2013/28590, 2013, A1, . Location in patent: Page/Page column 63; 64
  • 3
  • [ 108-59-8 ]
  • [ 3709-98-6 ]
YieldReaction ConditionsOperation in experiment
96% With sodium methylate In methanol; water Part B1.
Preparation of 4,6-Dihydroxy-2-ethylpyrimidine according to Step (1)
To a cooled, stirred solution of 25percent sodium methoxide (1200 ml, 5.55 mole) was added a slurry of 200 g (1.85 mole) of propionamide hydrochloride in 300 ml of methanol.
Next, 244 g (1.85 mole) of dimethyl malonate was added and the mixture was permitted to warm to about 20° C., after which it was stirred for 16 hours.
The mixture was evaporated in vacuo and water (about 2 l) was added.
This mixture was neutralized with concentrated hydrochloric acid to provide a white precipitate which was separated by filtration to provide 230 g (96percent) of 4,6-dihydroxy-2-ethylpyrimidine, m.p. 312°-315° C.
The structural assignment was confirmed by infrared and nuclear magnetic resonance spectral analyses.
Reference: [1] Patent: US4477450, 1984, A,
  • 4
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  • [ 3709-98-6 ]
Reference: [1] Patent: US4477450, 1984, A,
[2] Patent: US4536579, 1985, A,
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