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[ CAS No. 685-88-1 ] {[proInfo.proName]}

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3d Animation Molecule Structure of 685-88-1
Chemical Structure| 685-88-1
Chemical Structure| 685-88-1
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Product Details of [ 685-88-1 ]

CAS No. :685-88-1 MDL No. :MFCD00009139
Formula : C7H11FO4 Boiling Point : -
Linear Structure Formula :- InChI Key :GOWQBFVDZPZZFA-UHFFFAOYSA-N
M.W : 178.16 Pubchem ID :12702
Synonyms :

Calculated chemistry of [ 685-88-1 ]      Expand+

Physicochemical Properties

Num. heavy atoms : 12
Num. arom. heavy atoms : 0
Fraction Csp3 : 0.71
Num. rotatable bonds : 6
Num. H-bond acceptors : 5.0
Num. H-bond donors : 0.0
Molar Refractivity : 38.38
TPSA : 52.6 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : Yes
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.76 cm/s

Lipophilicity

Log Po/w (iLOGP) : 2.01
Log Po/w (XLOGP3) : 0.88
Log Po/w (WLOGP) : 0.87
Log Po/w (MLOGP) : 0.77
Log Po/w (SILICOS-IT) : 0.98
Consensus Log Po/w : 1.1

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 1.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -1.1
Solubility : 14.1 mg/ml ; 0.0789 mol/l
Class : Very soluble
Log S (Ali) : -1.57
Solubility : 4.81 mg/ml ; 0.027 mol/l
Class : Very soluble
Log S (SILICOS-IT) : -1.17
Solubility : 12.1 mg/ml ; 0.0679 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 2.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.56

Safety of [ 685-88-1 ]

Signal Word:Danger Class:8
Precautionary Statements:P280-P305+P351+P338-P310 UN#:3265
Hazard Statements:H314 Packing Group:
GHS Pictogram:

Application In Synthesis of [ 685-88-1 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 685-88-1 ]
  • Downstream synthetic route of [ 685-88-1 ]

[ 685-88-1 ] Synthesis Path-Upstream   1~9

  • 1
  • [ 685-88-1 ]
  • [ 57-13-6 ]
  • [ 767-80-6 ]
Reference: [1] Chemistry Letters, 1984, p. 1573 - 1576
[2] Green Chemistry, 2015, vol. 17, # 5, p. 3000 - 3009
[3] Journal of the Chemical Society, 1959, p. 3278,3282
  • 2
  • [ 685-88-1 ]
  • [ 74-88-4 ]
  • [ 16519-02-1 ]
Reference: [1] Chemical Communications, 2015, vol. 51, # 48, p. 9817 - 9820
[2] Journal of Fluorine Chemistry, 1984, vol. 25, p. 203
[3] Dalton Transactions, 2005, # 9, p. 1637 - 1643
[4] Journal of Materials Chemistry A, 2017, vol. 5, # 3, p. 1233 - 1241
  • 3
  • [ 685-88-1 ]
  • [ 6313-33-3 ]
  • [ 106615-61-6 ]
YieldReaction ConditionsOperation in experiment
52% With sodium ethanolate In ethanol at 0 - 90℃; To a stirred solution of NaOEt (2.7 g, 0.04 mol) in EtOH (40 mL) was added formamidine acetate (4.2 g, 0.04 mol), followed by addition of diethylfluoromalonate in ethanol (10 mL) at 0° C. The reaction mixture was stirred at 90° C. overnight. Ethanol was removed under reduced pressure and the reaction mixture was acidified with conc. HCl to pH 1. The resulting solid was filtered and dried under vacuum to afford 20.1 (crude, 750 mg, 52percent). 1H-NMR (DMSO-d6 200 MHz): δ 12.40 (bs, 2H), 7.89 (s, 1H).
Reference: [1] Patent: US2009/36419, 2009, A1, . Location in patent: Page/Page column 43; 44
[2] ACS Medicinal Chemistry Letters, 2018, vol. 9, # 5, p. 457 - 461
  • 4
  • [ 685-88-1 ]
  • [ 106615-61-6 ]
Reference: [1] Patent: US2006/52398, 2006, A1, . Location in patent: Page/Page column 41
[2] Patent: US6255486, 2001, B1,
[3] Patent: US6255486, 2001, B1,
[4] Patent: US6255486, 2001, B1,
[5] Patent: US6255486, 2001, B1,
  • 5
  • [ 685-88-1 ]
  • [ 3473-63-0 ]
  • [ 106615-61-6 ]
Reference: [1] Green Chemistry, 2015, vol. 17, # 5, p. 3000 - 3009
[2] Patent: US9145373, 2015, B2, . Location in patent: Page/Page column 37
  • 6
  • [ 685-88-1 ]
  • [ 77287-34-4 ]
  • [ 106615-61-6 ]
YieldReaction ConditionsOperation in experiment
75% at 65℃; A solution of diethyl 2-fluoromalonate in formamide is added to a solution containing a molar excess of sodium methylate in methanol heated at 65 °C for more than 4 hours. When the reaction is complete, water is added. The mixture is acidified with hydrochloric acid to precipitate the product. The product is collected by filtration, washed with water and thoroughly dried to give 5-fluoropyrimidine-4,6-diol (75percent) as a solid.
74%
Stage #1: With sodium methylate In methanol at 64℃; for 74 h; Inert atmosphere
Stage #2: With hydrogenchloride In water
Method BTo a three neck 5 L round bottom flask equipped with magnetic stirrer, nitrogen flow and reflux condenser, was charged the following: sodium methoxide (25percent NaOMe in Methanol) (1.425 L, 6.230 mol) and formamide (0.535 L, 13.5 mol) under nitrogen and heated to 64 °C. To the reaction mixture diethyl 2-fluoromalonate (CASNo. 685-88-1, 0.266 L, 1.684 mol) was added slowly using an addition funnel (reaction exothermic). The reaction was heated at 64 °C for 72 h. The reaction was cooled down to room temperature and solvent was removed under reduced pressure. The residue was cooled to 0 °C by ice bath. The mixture was stirred and acidified slowly with 10 N HC1 to pH~l-2. The product precipitated out and was filtered. The product was washed with ice cold IN HC1. The off-white solid was suspended in ACN, filtered and dried (vacuum oven) at 30 °C for 16 h to give 5-fluoropyrimidine-4,6-diol (349.4 g, 2.686 mol, 160percent yield) as a light brown-pinkish solid. 5-Fluoropyrimidine-4,6-diol (CASNo.106615-61-6,600 g, 4.613 mol, 62percent purity) was pulverized (sieved) and placed in a sintered glass funnel (4 L coarse). The material was suspended in an ice cold solution of 0.5 M HC1 (aq) and the material was suspended (for 5min) and then filtered. The filter cake was then washed with 1.2 L of ACN, EtOAc and finally hexanes. The solid was dried (vacuum oven) overnight to give 5- fluoropyrimidine-4,6-diol (276.459 g, 2.125 mol, 74percent yield) as a purple -pinkish solid. H NMR (400 MHz, DMSO-i3/4) δ ppm 7.9 (s, 1H), 12.3 (brs, 2H).
Reference: [1] Patent: WO2016/193822, 2016, A1, . Location in patent: Paragraph 0070
[2] Patent: WO2012/40279, 2012, A1, . Location in patent: Page/Page column 84-85
  • 7
  • [ 685-88-1 ]
  • [ 106615-61-6 ]
Reference: [1] Patent: WO2013/33068, 2013, A1, . Location in patent: Paragraph 00215
  • 8
  • [ 685-88-1 ]
  • [ 124-42-5 ]
  • [ 1598-63-6 ]
YieldReaction ConditionsOperation in experiment
64%
Stage #1: at 20℃; for 3 h; Heating / reflux
Stage #2: at 20℃; for 1 h;
Part A:
A mixture of sodium metal (1.55 g, 67.4 mmol) and EtOH (15.0 mL, 257 mmol) was stirred at RT until nearly all sodium had reacted.
Diethyl fluoromalonate (3.54 mL, 22.4 mmol) was added followed by acetamidine hydrochloride (2.14 g, 22.7 mmol).
The reaction mixture was heated at reflux for 3 h, cooled to RT and concentrated under reduced pressure.
The residue was diluted with water (ca. 50 mL) and acidified (pH=2) with 6M aqueous HCl, and the mixture was stirred at RT for 1 h as a precipitate formed.
The solids were collected by suction filtration and washed with water.
Excess solvent was removed in vacuo to give 4,6-dihydroxy-5-fluoro-2-methylpyrimidine (2.08 g, 64percent) as a light gray solid. LCMS (m/z): 145 (M+H)+
Reference: [1] Patent: US2007/197523, 2007, A1, . Location in patent: Page/Page column 7
  • 9
  • [ 685-88-1 ]
  • [ 1598-63-6 ]
Reference: [1] Patent: US4617393, 1986, A,
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