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CAS No. : | 93-84-5 | MDL No. : | MFCD00220274 |
Formula : | C7H5N3O3 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | DLJZIPVEVJOKHB-UHFFFAOYSA-N |
M.W : | 179.13 | Pubchem ID : | 3725611 |
Synonyms : |
|
Num. heavy atoms : | 13 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.0 |
Num. rotatable bonds : | 1 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 47.74 |
TPSA : | 94.47 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -7.12 cm/s |
Log Po/w (iLOGP) : | 0.73 |
Log Po/w (XLOGP3) : | 0.39 |
Log Po/w (WLOGP) : | 0.76 |
Log Po/w (MLOGP) : | -0.19 |
Log Po/w (SILICOS-IT) : | -0.02 |
Consensus Log Po/w : | 0.34 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.64 |
Solubility : | 4.08 mg/ml ; 0.0228 mol/l |
Class : | Very soluble |
Log S (Ali) : | -1.94 |
Solubility : | 2.06 mg/ml ; 0.0115 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -2.2 |
Solubility : | 1.14 mg/ml ; 0.00634 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 2.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.92 |
Signal Word: | Warning | Class: | |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With hydrogen In methanol; ethyl acetate for 6 h; | Step: 21bSynthesis of 5-Amino-l,3-dihydro-benzoimidazol-2-one.Procedure:Pd-C(140 mg) was added to a solution of 5-Nitro-l,3-dihydro-benzoimidazol-2-one (1.4g, 0.0078mol) in MeOH and EtOAc, and was hydrogenated for 6hrs. The reaction was monitored by the TLC (10percent methanol in chloroform). The resulting reaction mixture was filtered through celite bed and was concentrated to afford lg (86 percent yield) of 5-Amino-l,3- dihydro-benzoimidazol-2-one. |
78% | With hydrogen In ethanol for 3 h; | EXAMPLE 35; [0198] This example illustrates a preparation of 5-(6-methoxy-l-oxoisoindolin-2-yl)-l/-f- benzo[</]imidazol-2(3H)-one in an embodiment of the invention.; Step A: Synthesis of 5-amino-lH-benzo[<i]imidazol-2(3/-/)-one as an intermediate <n="80"/>; [0199] A mixture of 5-nitro-l/f-benzo[1H NMR (300 MHz, CDCl3) δ 6.75-6.73 (m, IH), 6.41-6.35 (m, 2H); ESI MS m/z 150 [M + H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | In sodium hydroxide; | a 1,3-dimethyl-<strong>[93-84-5]5-nitro-1,3-dihydrobenzimidazol-2-one</strong> 90 parts of <strong>[93-84-5]5-nitro-1,3-dihydrobenzimidazol-2-one</strong> are suspended in 500 parts of aqueous sodium hydroxide solution (30%) and the suspension is heated to 53 C.; 161 parts of dimethyl sulphate are added dropwise over 12 hours during which the temperature rises to 70 C. The mixture is cooled to room temperature and filtered and the solid product is washed to neutrality. Drying under reduced pressure at 80 C. gives 99 parts of a beige powder of a compound of the following formula Yield: 96% Melting point: 206.3 C. 1H-NMR (DMSO): delta: 3.35 (s, CH3)-3.37 (s,CH3)-7.28 (d, 3J=9 Hz, H-C7)-7.98 (d, 4J=2 Hz, H-C4)-8.00 (dd, 3J=9 Hz, 4J=2Hz, H-C6) |
In sodium hydroxide; | a 1,3-Dimethyl-<strong>[93-84-5]5-nitro-1,3-dihydrobenzimidazol-2-one</strong> 90 parts of <strong>[93-84-5]5-nitro-1,3-dihydrobenzimidazol-2-one</strong> are suspended in 500 parts of aqueous sodium hydroxide solution (30%) and the suspension is heated to 53 C.; 161 parts of dimethyl sulphate are added dropwise over 12 hours during which the temperature rises to 70 C. The mixture is cooled to room temperature and filtered and the solid product is washed to neutrality. Drying under reduced pressure at 80 C. gives 99 parts of a beige powder of a compound of the following formula |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | Example 3; Synthesis of Compound 19; DMF (10 ml) was added to 0.6 g of 60% NaH (15.12 mM) in a 100 mL round bottom flask under N2. Added to the flask was 1.29 g of 5-nitro-2-benzimidazolinone (7.20 mM) in 10 mL DMF and rinsed with 10 mL more DMF. The solution was stirred 25 minutes and 10.22 g MeI (72 mM) was added and then stirred a further 3 hours. HCl (200 mL, 1 M) was added to the solution and then was extracted with EtOAc, washed with brine, and dried over MgSO4 and then concentrated in vacuo and flashed 0 to 100% EtOAc in hexanes to give 1.4 g of 1,3-dimethyl-<strong>[93-84-5]5-nitro-1H-benzo[d]imidazol-2(3H)-one</strong> (93% yield). | |
86% | With potassium carbonate; In N,N-dimethyl-formamide; at 0 - 20℃; | To a solution of <strong>[93-84-5]5-nitro-1H-benzo[d]imidazol-2(3H)-one</strong> (55 g, 309 mmol) in 150 mL of DMF was added K2CO3 (85 g, 618 mmol), the reaction mixture was cooled to 0 C., then iodomethane (109 g, 772 mmol) was slowly added. The reaction mixture was stirred at RT overnight, then water was added to the reaction mixture. The resulting suspension was filtered and the collected solids were washed with water (200 mL) and dried to give 1,3-dimethyl-<strong>[93-84-5]5-nitro-1H-benzo[d]imidazol-2(3H)-one</strong> as a yellow solid (55 g, 86%). MS (ES+) C9H9N3O3 requires: 207. found: 208 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With sulfated polyborate; at 120℃; for 2h; | General procedure: A mixture of amine (4 mmol or 2 mmol), or substituted OPDA (2 mmol), urea (2.4mmol), or N-phenylurea (2 mmol) and sulfated polyborate (10 wt%) was heated at 120C in an oil bath. The reaction was monitored by thin layer chromatography. After completion of the reaction, the mixture was cooled to room temperature and quenched by water (5 mL); solid precipitated was filtered at vacuum pump, washed with water (3×5 mL), dried under vacuum and recrystallized from ethanol to afford the pure product. |
A solution of 1,2-diamino-4-nitrobenzene (3. 0g) and urea (7.06g) in dimethylformamide was stirred and heated at reflux for 5h. The cooled mixture was poured into water and the solid was collected by filtration. The solid was suspended in hot water and the remaining solid was collected. The resultant solid was then suspended in hydrochloric acid (1 M), stirred and the remaining solid was collected and air dried to give 5-nitro-1, 3-dihydrobenzimidazol-2-one as a tan coloured solid (1. 9g). 'H NMR (DMSO-d6) d 11.4 (br s, 1 H) 11.2 (br s 1 H) 7.95 (dd, 1 H) 7.7 (d, 1 H) 7.1 (d, 1 H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87.8% | With sodium hydrogen sulfide; In 1-methyl-pyrrolidin-2-one; at 90℃; under 22502.3 Torr; for 24h; | General procedure: Add in a 15ml Teflon-lined reactor216 mg (2 mmol) of o-phenylenediamine, 56 mg (1 mmol)NaHS (molar ratio of o-phenylenediamine to NaHS is 1:2),Add 1 mL of NMP as the reaction solvent.Put the magnets and tighten the reactor.Then charge 3MPa of carbon dioxide,The reaction was stirred at 90 C for 24 hours.After cooling the reactor to room temperature,Extracted with ethyl acetate,Washed with saturated saline,After drying the organic layer, the solvent is removed under reduced pressure to give a crude material;The crude product is separated by recrystallization or column chromatography (200-300 mesh silica gel,Petroleum ether and ethyl acetate as eluent)99% white powder benzimidazolone 116mg,The yield was 88%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With caesium carbonate; In N,N-dimethyl-formamide; at 80℃; for 12h; | Example 32; Synthesis of Compound 65; Commercially available 5-Nitro-2benzimidazolinone a was dissolved in 50 ml of DMF in a round bottom flask with a vigreux condensation column attached. To this solution was added 23.65 g Cs2CO3 and 8.93 g of 2-bromopropane and the mixture was placed under N2 in an oil bath heated to 80 C. for 12 hours. The reaction was almost complete by TLC, so it was cooled to room temp, diluted with 1 M HCl, extracted with EtOAc, washed with brine, dried over MgSO4, concentrated under vacuum, and flashed on silica (EtOAc/hexanes) to give 7.64 g compound b. Compound b (6.35 g) was dissolved in 200 ml EtOH and 200 uL of concentrated HCl and bubbled under N2 for 10 minutes at which time 2 scoops of 10% Pd/C was added and an H2 balloon attached. This was stirred for 48 hours. The reaction was completed by LCMS, filtered over celite and concentrated under vacuum to give compound c (5.6 g) in a 99% yield. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With caesium carbonate; In N,N-dimethyl-formamide; at 80℃; for 12h; | Example 31; Synthesis of Compound 64; Commercially available 5-nitro-2-benzimidazolinone a was dissolved in 70 ml of DMF in a round bottom flask with a vigreux condensation column attached. To this solution was added 9.22 g Cs2CO3 and 4.41 g of ethyl iodide and the mixture was placed under N2 in an oil bath heated to 80 C. for 12 hours. The reaction was almost complete by TLC, so it was cooled to room temp, diluted with 1 M HCl, extracted with EtOAc, washed with brine, dried over MgSO4, concentrated under vacuum, and flashed by ISCO (EtOAc/hexanes) to give compound b. Compound b was dissolved in 200 ml EtOH and 200 uL of concentrated HCl and bubbled under N2 for 10 minutes at which time 2 scoops of 10% Pd/C was added and an H2 balloon attached. This was stirred 12 hours. The reaction was completed by LCMS, filtered over celite and concentrated under vacuum to give compound c. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | In N,N-dimethyl-formamide; at 0 - 20℃; for 4h; | To a 0 C. solution of 4-nitrobenzene-1,2-diamine (44 g, 285 mmol) in 80 mL of DMF was added 1,1'-carbonyldiimidazole (70 g, 428 mmol). The reaction mixture was stirred at RT for 4 h, then water (250 mL) was added. The resulting suspension was filtered, and the collected solids were washed with water (200 mL) and dried to give 5-nitro-1H-benzo[d]imidazol-2(3H)-one as a yellow solid (45 g, 88%). MS (ES+) C7H5N3O3 requires: 179. found: 180 [+H]+. |
73.9% | In N,N-dimethyl-formamide; at 20℃; for 1h; | Step: 21aSynthesis of 5-Nitro-l,3-dihydro-benzoimidazol-2-one.Procedure:CDI (6.35 g, 0.039 mol) was added to a solution of 4-Nitro-benzene- 1 ,2-diamine (2g, 0.013mol) in DMF and the flask was stirred for lhr at RT. The reaction was monitored by the TLC (10% methanol in chloroform). The resulting reaction mixture was quenched with crushed ice, stirred for lOmins, filtered and the filterate was dried under reduced pressure to afford 1.7 g ( 73.9 % yield) of 5-Nitro-l ,3-dihydro-benzoimidazol-2-one. |
With dmap; In acetonitrile; at 20℃; for 4h; | Step 1. To a solution of 4-nitro-o-phenylenediamine and DMAP in MeCN (225 mL) at RT, was added a solution of Iota,Gamma-carbonyldiimidazole in MeCN (113 mL) and the mixture was stirred at RT for 4h. The formation of yellow precipitate was observed. UPLC showed complete conversion. The yellow precipitate was filtered, washed with MeCN and dried under vacuum to give the desired product, 5-nitro- lH-benzo[d]imidazol-2(3H)-one (A/1482/79/1) as yellow solid. A second crop named A/1482/79/2 was recovered after filtration of the mother liquor after 16h. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | In toluene; for 18h;Reflux; Green chemistry; | General procedure: A mixture of 2-phenoxycarbonyl-4,5-dichloropyridazin-3(2H)-one (2a, 1.2 equiv), compounds 4 (1 equiv), and toluene (10 mL)was stirred at reflux conditions until amide intermediate wasconsumed (monitored by TLC). After cooling to r.t., the resultingprecipitate was filtered off and the solvent was evaporatedunder reduced pressure. The residue was transferred to anopen-bed silica gel column (3 × 7 cm). The column was elutedwith n-hexane-THF (1:2, v/v). Fractions containing compounds5 were combined and evaporated under reduced pressure togive compounds 5. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
340 mg | With caesium carbonate; In N,N-dimethyl-formamide; at 65℃; for 6h;Sealed tube; | Step 1. A mixture of 5-nitro-lH-benzo[d]imidazol-2(3H)-one (200 mg, 1.12 mmol), cesium carbonate (800 mg, 2.46 mmol) and tert-butyl 2-bromoacetate (0.35 mL, 2.3 mmol) in DMF (5 mL) was sealed and heated in an oil bath at 65C for 6 h. The reaction mixture was poured into warm water (50 mL), cooled to rt, filtered and dried in vacuo to afford di-tert-butyl 2,2'-(5-nitro-2-oxo-lH-benzo[d]imidazole-l,3(2H)-diyl)diacetate (340 mg) as a white solid. LC-MS retention time = 1.31 min; m/z = 295.9 [M-2(t-Bu)+H]+. (Column: Waters Aquity BEH C18 2.1 X 50 mm 1.7^m-particles; Solvent A = 100% Water/ 0.05% TFA; Solvent B = 100% Acetonitrile/0.05% TFA; Flow Rate = 0.8 mL/min. Start % B = 2; Final % B = 98; Gradient Time = 1.5 minutes; Wavelength = 220 nm). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With caesium carbonate; In N,N-dimethyl-formamide; acetonitrile; at 100℃; for 1h;Microwave irradiation; | To a mixture of 5-nitro-2-benzimidazolinone (300 mg, 1.62 mmol) and dicesium carbonate (0.75 g, 2.3 mmol) in acetonitrile (8 ml_) and DMF (2ml_) was added (3-hydroxy-3- methyl-butyl) 4-methylbenzenesulfonate (Intermediate C1 a, 450 mg, 1.74 mmol) and the resulting mixture was heated to 100 C for 1 h in the microwave. After cooling, the mixture was partitioned between DCM and water, acidified to pH8 with 10% citric acid, and layers separated. Organic phase evaporated under reduced pressure, then purified using reverse phase flash chromatography (Biotage 12g SNAP Ultra C18, 30-65% methanol in water, 0.1 % formic acid modifier). 1 H NMR (600 MHz, Chloroform-d) delta 8.13 (dd, J = 8.6, 2.2 Hz, 1 H), 7.97 (d, J = 2.2 Hz, 1 H), 7.12 (d, J = 8.7 Hz, 1 H), 4.16 - 4.09 (m, 4H), 1.96 - 1.88 (m, 4H), 1.34 (s, 6H), 1.33 (s, 6H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
4% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; at 0 - 20℃; for 16h;Inert atmosphere; | To a stirred solution of <strong>[93-84-5]5-nitro-1,3-dihydro-2H-benzo[d]imidazol-2-one</strong> (CAS: 93-845) (1.00 g, 5.58 mmol), 2-(4-(methyisulfony)piperazin-1-yDethanol (CAS: 72388-13-7) (1.16 g, 5.58 mmol) and Phs3P (2.93 g, 11.16 mmol) inTHF (20 mL) under Ar atmosphere at 0 C was added DEAD (1.94 g, 11.16 mmol). The reaction was stirred under Ar atmosphere at room temperature for 16 h. The resulting mixture was concentrated and the residue was purified by silica gel chromatography (PE/EA =5/1, v/v} to give impure desired product (500 mg), which was further purified by prepHPLC (Waters 2767/Qda, Column: SunFire 19*250mm 10um, Mobile Phase A: 0.1%TFA/H,O, B: ACN). Theresulting fractions were basified byNaHCO(solid), extracted with ErOAc (10 mL X 3). The combined organic extracts were washed with brine (20 mL), dried over anhydrous Na2SOu,filtered and concentrated to give desired product (mixture oftwo isomers, ca. 180 mg) as a white solid. The product was then separated by SFC (SFC80, Waters; [A-H (2.5*25cem, 2.5*25cm, 10um; A: Supercritical CO, Mobile phase B: MeOH/NH; (100/0.1); A:B = 67/33; Flow rate: 60 mL/min; column temperature (T): 25 C; Backpressure (BPR): 100 bar) to give intermediate 135 (86 mg, 4% yield, peak 2) as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium hydride; In N,N-dimethyl-formamide; at 0 - 10℃; for 8h; | Intermediate 301 was prepared from <strong>[93-84-5]5-nitro-1,3-dihydro-2H-benzo[d]imidazol-2-one</strong> 10 (CAS: 984-5) and bromoacetamide (CAS: 683-57-8) by the method indicated in the scheme below: |
Tags: 93-84-5 synthesis path| 93-84-5 SDS| 93-84-5 COA| 93-84-5 purity| 93-84-5 application| 93-84-5 NMR| 93-84-5 COA| 93-84-5 structure
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P404 | Store in a closed container. |
P405 | Store locked up. |
P406 | Store in corrosive resistant/ container with a resistant inner liner. |
P407 | Maintain air gap between stacks/pallets. |
P410 | Protect from sunlight. |
P411 | |
P412 | Do not expose to temperatures exceeding 50 oC/ 122 oF. |
P413 | |
P420 | Store away from other materials. |
P422 | |
P402 + P404 | Store in a dry place. Store in a closed container. |
P403 + P233 | Store in a well-ventilated place. Keep container tightly closed. |
P403 + P235 | Store in a well-ventilated place. Keep cool. |
P410 + P403 | Protect from sunlight. Store in a well-ventilated place. |
P410 + P412 | Protect from sunlight. Do not expose to temperatures exceeding 50 oC/122oF. |
P411 + P235 | Keep cool. |
Disposal | |
Code | Phrase |
P501 | Dispose of contents/container to ... |
P502 | Refer to manufacturer/supplier for information on recovery/recycling |
Physical hazards | |
Code | Phrase |
H200 | Unstable explosive |
H201 | Explosive; mass explosion hazard |
H202 | Explosive; severe projection hazard |
H203 | Explosive; fire, blast or projection hazard |
H204 | Fire or projection hazard |
H205 | May mass explode in fire |
H220 | Extremely flammable gas |
H221 | Flammable gas |
H222 | Extremely flammable aerosol |
H223 | Flammable aerosol |
H224 | Extremely flammable liquid and vapour |
H225 | Highly flammable liquid and vapour |
H226 | Flammable liquid and vapour |
H227 | Combustible liquid |
H228 | Flammable solid |
H229 | Pressurized container: may burst if heated |
H230 | May react explosively even in the absence of air |
H231 | May react explosively even in the absence of air at elevated pressure and/or temperature |
H240 | Heating may cause an explosion |
H241 | Heating may cause a fire or explosion |
H242 | Heating may cause a fire |
H250 | Catches fire spontaneously if exposed to air |
H251 | Self-heating; may catch fire |
H252 | Self-heating in large quantities; may catch fire |
H260 | In contact with water releases flammable gases which may ignite spontaneously |
H261 | In contact with water releases flammable gas |
H270 | May cause or intensify fire; oxidizer |
H271 | May cause fire or explosion; strong oxidizer |
H272 | May intensify fire; oxidizer |
H280 | Contains gas under pressure; may explode if heated |
H281 | Contains refrigerated gas; may cause cryogenic burns or injury |
H290 | May be corrosive to metals |
Health hazards | |
Code | Phrase |
H300 | Fatal if swallowed |
H301 | Toxic if swallowed |
H302 | Harmful if swallowed |
H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
Sorry,this product has been discontinued.
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