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CAS No. : | 947249-14-1 | MDL No. : | MFCD12405788 |
Formula : | C6H6F2N2O | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | URJOUYRTHKWERB-UHFFFAOYSA-N |
M.W : | 160.12 | Pubchem ID : | 28981901 |
Synonyms : |
|
Num. heavy atoms : | 11 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.17 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 4.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 35.24 |
TPSA : | 48.14 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.26 cm/s |
Log Po/w (iLOGP) : | 1.17 |
Log Po/w (XLOGP3) : | 1.43 |
Log Po/w (WLOGP) : | 2.11 |
Log Po/w (MLOGP) : | 0.28 |
Log Po/w (SILICOS-IT) : | 1.06 |
Consensus Log Po/w : | 1.21 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -2.01 |
Solubility : | 1.58 mg/ml ; 0.00988 mol/l |
Class : | Soluble |
Log S (Ali) : | -2.05 |
Solubility : | 1.44 mg/ml ; 0.00899 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -2.0 |
Solubility : | 1.59 mg/ml ; 0.00995 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.96 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | With hydrogen In ethanol at 20℃; | A mixture of3-(diflυoroinetho?ty)-2-ιiitropyridine(, 5.428 g, 28.6 mmol) in absolute EtOH (50 ml) solution with catalytic Pd/C (0.55 g, lψwtpercent Palladium on activated carbon) was stirred under 1 atm Hj at ambient temperature. LCMS aliquot indicated reaction completion after overnight stirring. Catalyst Pd/C was removed by filtration through a celite pad, filtrate was concentrated and desired product 7 (4.41 g, 27.5 mmol, 96percent yield, [IVWI] :... 161.1, /R ... 0.28 min) was obtained as a colorless solid. 1H NMK (400 MHz, CDCI3) δ ppxn 7,90-7.97 (m, 1 H), 7.24-7.31 (m, I H), 6.61-6.68 (m, 1 H), 6.49 (t, J^r 64.4 Hz, 1 H), 4.73 (br s, 2 H). |
95% | With iron; ammonium chloride In ethanol; waterHeating / reflux | Step 2:8182 <n="57"/>To a solution of compound 81 (10 g, 0.0526 mol) in EtOH/H2O (2:1 , 450 mL) was added iron powder (15 g, 0.268 mol), followed by addition of NH4CI (7.5 g, 0.14 mol) in one portion. After addition, the mixture was refluxed overnight. TLC (Petroleum ether/EtOAc 2:1 ) indicated the reaction was complete. EtOH was removed under reduced pressure and the residue was partitioned between saturated aq. NaHCO3 (500 mL) and EtOAc (400 mL). The aqueous layer was extracted with EtOAc (2*300 mL) and the combined organic layers were washed with brine (2*300 mL), dried over anhydrous Na2SO4 and concentrated in vacuo to give compound 82 (8.0 g, 95percent) as a yellow solid. |
66% | With iron; acetic acid In ethanol at 100℃; | 3-(Difluoromethoxy)-2-nitropyridine (450 mg, 2.37 mmol) obtained in step 1 was dissolved in ethanol (2 mL)-acetic acid (2 mL), reduced iron (397 mg, 7.10 mmol) was added, and the mixture was stirred at 100°C overnight. Since the starting material did not disappear, reduced iron (397 mg, 7.10 mmol) was added, and the mixture was further stirred at 100°C overnight. The mixture was filtered through celite, and the filtrate was concentrated under reduced pressure. To the obtained residue was added saturated aqueous sodium hydrogen carbonate solution, and the mixture was extracted 3 times with ethyl acetate. The combined organic layers were dried over anhydrous magnesium sulfate, and purified by silica gel column chromatography (chloroform/methanol = 9/1 v/v) to give 3-(difluoromethoxy)pyridin-2-amine (250 mg, 66percent). ESIMS m/z: 161 (M + H)+; 1H NMR (270 MHz, CDCl3, δ): 4.79 (br s, 2H), 6.14-6.80 (m, 2H), 7.19-7.35 (m, 1H), 7.85-7.98 (m, 1H) |
55% | With iron; ammonium chloride In ethanol; water at 90℃; for 1 h; | To a stirred solution of 3-(difluoromethoxy)-2-nitropyridine (5 g, 2.63 mmol) and ammonium chloride (4.22 g, 78.9 mmol) in ethanol (40 mL) and water (30 mL) was added iron powder (7.34 g, 131.51 mmol). The reaction mixture was heated to 90 °C for 1 h. After cooling down the reaction mixture was filtered and the solid was washed with ethyl acetate. The mother liquid was concentrated to dryness in vacuo. The residue was diluted with water and extracted with ethyl acetate (3 x 70 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo affording 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 55percent). The residue was used in next step directly without further purification. NMR (400 MHz, DMSO-d6) δ 7.90 (dd, Jj = 4.8 Hz, J2 = 1.6 Hz, 1H), 7.28 (dd, Jj = 8.0 Hz, J2 = 0.8 Hz, 1H), 7.07 (t, / = 74.0 Hz, 1H), 6.53 (dd, J} = 8.0 Hz, J2 = 0.8 Hz, 1H), 6.01 (s, 2H). |
55% | With iron; ammonium chloride In ethanol; water at 90℃; for 1 h; | To a stirred solution of 3-(difluoromethoxy)-2-nitropyridine (5 g, 2.63 mmol) and ammonium chloride (4.22 g, 78.9 mmol) in ethanol (40 mL) and water (30 mL) was added iron powder (7.34 g, 131.51 mmol). The reaction mixture was heated to 90 °C for 1 h. After cooling down the reaction mixture was filtered and the solid was washed with ethyl acetate. The mother liquid was concentrated to dryness in vacuo. The residue was diluted with waterand extracted with ethyl acetate (3 x 70 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo affording 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 55percent). The residue was used in next step directly without further purification. 1H NMR (400 MHz, DMSO-d6) ö: 7.90 (dd, 11 = 4.8 Hz, 12=1.6 Hz, 1H), 7.28 (dd, 11 = 8.0 Hz, 12 = 0.8 Hz, 1H), 7.07 (t, I = 74.0 Hz, 1H), 6.53 (dd, 11 =8.0 Hz, 12 = 0.8 Hz, 1H), 6.01 (s, 2H). |
55% | With iron; ammonium chloride In ethanol; water at 90℃; for 1 h; Inert atmosphere | To a stirred solution of 3-(difluoromethoxy)-2-nitropyridine (5 g, 2.63 mmol) and ammonium chloride (4.22 g, 78.9 mmol) in ethanol (40 mL) and water (30 mL) was added iron powder (7.34 g, 131.51 mmol). The reaction mixture was heated to 90° C. for 1 h. After cooling down the reaction mixture was filtered and the solid was washed with ethyl acetate. The mother liquid was concentrated to dryness in vacuo. The residue was diluted with water and extracted with ethyl acetate (3*70 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo affording 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 55percent). The residue was used in next step directly without further purification. 1H NMR (400 MHz, DMSO-d6) δ7.90 (dd, J1=4.8 Hz, J2=1.6 Hz, 1H), 7.28 (dd, J1=8.0 Hz, J2=0.8 Hz, 1H), 7.07 (t, J=74.0 Hz, 1H), 6.53 (dd, J1=8.0 Hz, J2=0.8 Hz, 1H), 6.01 (s, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.383333 h; | To a solution of 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 14.36 mmol) in acetonitrile (15 was added N-bromosuccinimide (2.61 g, 14.65 mmol) over 3 min at 0 °C. The reaction mixture was stirred at the same temperature for another 20 min and subsequently concentrated to dryness in vacuo. The resulting viscous mass was diluted with water and extracted with ethyl acetate (3 x 60 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo. The resulting residue was purified by column chromatography (silica gel, 100-200 mesh, 20percent ethyl acetate in hexane) affording 5-bromo-3-(difluoromethoxy)pyridin-2-amine (3.2 g, 93percent): NMR (400 MHz, DMSO-d6) δ 7.89 (s, 1H), 7.51 (s, 1H), 7.16 (t, / = 73.6 Hz, 1H), 6.34 (s, 2H). |
93% | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.383333 h; | To a solution of 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 14.36 mmol) in acetonitrile (15 mL) was added N-bromosuccinimide (2.61 g, 14.65 mmol) over 3 mm at 0 °C. The reaction mixture was stirred at the same temperature for another 20 mm and subsequently concentrated to dryness in vacuo. The resulting viscous mass was diluted with water and extracted with ethyl acetate (3 x 60 mL). The combined organic layers were driedover sodium sulfate and concentrated to dryness in vacuo. The resulting residue was purified by column chromatography (silica gel, 100-200 mesh, 20percent ethyl acetate in hexane) affording 5-bromo-3-(difluoromethoxy)pyridin-2-amine (3.2 g, 93percent): 1H NMR (400 MHz, DMSO-d6) ö: 7.89 (s, 1H), 7.51 (s, 1H), 7.16 (t, I = 73.6 Hz, 1H), 6.34 (s, 2H). |
93% | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.383333 h; Inert atmosphere | To a solution of 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 14.36 mmol) in acetonitrile (15 mL) was added N-bromosuccinimide (2.61 g, 14.65 mmol) over 3 min at 0° C. The reaction mixture was stirred at the same temperature for another 20 min and subsequently concentrated to dryness in vacuo. The resulting viscous mass was diluted with water and extracted with ethyl acetate (3*60 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo. The resulting residue was purified by column chromatography (silica gel, 100-200 mesh, 20percent ethyl acetate in hexane) affording 5-bromo-3-(difluoromethoxy)pyridin-2-amine (3.2 g, 93percent): 1H NMR (400 MHz, DMSO-d6) δ 7.89 (s, 1H), 7.51 (s, 1H), 7.16 (t, J=73.6 Hz, 1H), 6.34 (s, 2H). |
91.2% | Stage #1: at 20℃; for 2 h; Stage #2: With water; sodium hydrogencarbonate In ethyl acetate |
Step 3:82 M 83To a solution of compound 82 (8.0 g, 0.05 mol) in AcOH (100 mL) was added dropwise bromine (8.0 g, 0.05 mol) at room temperature. The mixture was stirred at ambient temperature for 2 h. TLC (Petroleum ether/EtOAc 2:1 ) indicated the reaction was complete. AcOH was removed under reduced pressure and the residue was partitioned between saturated aq. NaHCO3 (200 mL) and EtOAc (200 mL). The aqueous layer was extracted with EtOAc (200 mL) and the combined organic layers were washed with brine (2*300 mL), dried over anhydrous Na2SO4 and concentrated in vacuo to give crude product, which was purified via column chromatography (petroleum ether/EtOAc 8:1-4:1 ) to afford the product 83 (10.9 g, 91.2percent) as a yellow solid. |
80% | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.166667 h; | N-Bromosuccinamide (1.00 g, 5.62 mmol) was added portionwise over 10 min to a cooled solution of 3-(difluoromethoxy)pyridin-2-amine (1.12 g) in dry acetonitrile (20 ml) at 0° C. The reaction mixture was further stirred at 0° C. for 10 min. The mixture was concentrated, and residue was partitioned between EtOAc/sat. Na2CO3/H2O (30 ml/15 ml/15 ml). The organic phase was sequentially washed with sat. aqueous Na2CO3/H2O (15 ml/15 ml) and brine (30 ml), dried (Na2SO4), and concentrated. The resulting residue was extracted with EtOAc/hexanes (6 ml/30 ml), and the resulting suspension was filtered through Celite, and the resulting filtrate was concentrated to provide 1.32 g (80percent) of 5-bromo-3-(difluoromethoxy)pyridine-2-amine. LCMS (m/z, MH+): 238.9, tR=0.52 min; 1H NMR (CDCl3, 400 MHz) δ 7.99 (d, J=2.0 Hz, 1H), 7.41 (m, 1H), 6.50 (t, J=72.8 Hz, 1H), 4.75 (br s, 2H). |
80% | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.333333 h; | Bromosuccinamide (1.0Og, 5.62 mmol) was added portionwise over 10 min to a cooled solution of 3-(difiuoromethoxy)pyridin-2-amine (1.12 g) in dry acetonitrile (20ml) at 0 0C. The reaction mixture was further stirred at 0 0C for lOmin. The mixture was concentrated, and residue was partitioned between EtO Ac/sat. Na2CO3ZH2O(S OmI/ 15ml/ 15ml). The organic phase was sequentially washed with sat. aqueous Na2CO3ZH2O(15ml/l 5ml) and brine(30ml), dried (Na2SO^, and concentrated. The resulting residue was extracted with EtOAc/hexanes(6ml/30ml), and the resulting suspension was filtered through Celite, and the resulting filtrate was concentrated to provide 1.32 g (80percent) of 5-bromo-3-(difiuoromethoxy)pyridine-2-amine. LCMS (m/z, MH+): 238.9, tR = 0.52min; 1H NMR (CDCl3, 400 MHz) δ 7.99 (d, J = 2.0 Hz, 1 H), 7.41 (m, 1 H), 6.50 (t, J = 72.8 Hz, 1 H), 4.75 (br s, 2 H). |
3.2 g | With N-Bromosuccinimide In acetonitrile at 0℃; for 0.383333 h; | Step 3: 5-bromo-3-(difluoromethoxy)pyridin-2-amine To a solution of 3-(difluoromethoxy)pyridin-2-amine (2.3 g, 14.36 mmol) in acetonitrile (15 mL) was added N-bromosuccinimide (2.61 g, 14.65 mmol) over 3 min at 0 °C. The reaction mixture was stirred at the same temperature for another 20 min and subsequently concentrated to dryness in vacuo. The resulting viscous mass was diluted with water and extracted with ethyl acetate (3 x 60 mL). The combined organic layers were dried over sodium sulfate and concentrated to dryness in vacuo. The resulting residue was purified by column chromatography (silica gel, 100-200 mesh, 20percent ethyl acetate in hexane) affording 5-bromo-3-(difluoromethoxy)pyridin-2-amine (3.2 g, 93percent): NM (400 MHz, DMSO-d6) δ 7.89 (s, 1H), 7.51 (s, 1H), 7.16 (t, / = 73.6 Hz, 1H), 6.34 (s, 2H). |
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