Structure of 98545-64-3
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 98545-64-3 |
Formula : | C8H8BrNO2 |
M.W : | 230.06 |
SMILES Code : | O=C(OC)C1=CC=C(N)C=C1Br |
MDL No. : | MFCD00859376 |
Boiling Point : | No data available |
InChI Key : | KZOQVTUWEHNNMH-UHFFFAOYSA-N |
Pubchem ID : | 5244418 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 12 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.12 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 49.83 |
TPSA ? Topological Polar Surface Area: Calculated from |
52.32 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.83 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.82 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.83 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.06 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.65 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.84 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.65 |
Solubility | 0.514 mg/ml ; 0.00223 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.54 |
Solubility | 0.666 mg/ml ; 0.00289 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.97 |
Solubility | 0.244 mg/ml ; 0.00106 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.41 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.55 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94.2% | With tin(II) chloride dihdyrate; In ethyl acetate; for 4h;Reflux; | To a solution of compound 20 (4.5g, 17.0mmol) in EtOAc (100mL) was added SnCl2·2H2O (38.3g, 0.17mol). The mixture was heated to reflux and stirred for 4h. The mixture was poured into saturated NaHCO3 (500mL) and EtOAc (370mL). The organic layer was washed with brine (300mL), and dried over anhydrous MgSO4. The residue after rotary evaporation was purified by column chromatography over silica gel to give compound 21 as a solid (3.68g, 94.2% yield). 1H NMR (400MHz, CDCl3): delta 7.75 (d, J=8.5 Hz, 1H), 6.92 (d, J=2.2Hz, 1H), 6.57 (dd, J=8.5, 2.2Hz, 1H), 4.04 (brs, 2H) and 3.86 (s, 3H) ppm; mp: 96-98C. |
To a suspension of 2-bromo-4-nitro-benzoic acid methyl ester [100959-22-6] (350 mg, 1.35 mmol) in MeOH (60 mL) were subsequently added tin powder (1.6 g, 13.5 mmol) and 3N aqueous HCI (27.8 mL, 83 mmol). The mixture was stirred overnight at RT. The liquid phase was decanted from the excess tin and neutralized by adding a saturated aqueous NaHC03 solution. An equal amount of water by volume was added and the water phase was extracted with EtOAc (3x). The combined organics were dried (Phase Separator) and concentrated in vacuo. The residue was purified by flash column chromatography on silica gel (eluent: EtOAc/c-hexane 1 :4) to give the title compound as yellow solid. MS (LC/MS): 230 [M+H]+; tR (HPLC conditions b): 2.89 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
36% | With sodium tetrahydroborate; nickel(II) acetate tetrahydrate; In water; acetonitrile; at 10 - 20℃; | General procedure: Variant C: Adapting a literature known protocol (Setamdideh, et al., Orient. J. Chem., 2011, 27(3), 991-996), to a solution of the aromatic nitro compound (10 mmol) in acetonitrile (MeCN) (20 mL) is added a solution of nickel(II) acetate tetrahydrate (Ni(OAc)2 4H20) (1.0 mmol) in water (2 mL). The reaction mixture is stirred vigorously at room temperature and subsequently cooled to about 10C (water/ice bath). Solid sodium borohydride (NaBH4) (40 mmol) is added in small portions upon which a black nickelboride precipitates (NiB2) (Note: The reaction is strongly exothermic and copious amounts of hydrogen gas are generated). The reaction mixture is stirred with warming to room temperature for 1-4 hours (TLC reaction control). Upon completion, the reaction mixture is diluted with ethyl acetate (EtOAc) (30 mL) and the organic solution is filtered over a short plug of Celite. The filtrate is washed with saturated aqueous sodium hydrogencarbonate (NaHC03) (1 x) and the aqueous layer is extracted with EtOAc (lx). The combined organic extracts are washed with brine, dried over anhydrous magnesium sulfate (MgS04), filtered, and the combined filtrates are evaporated under reduced pressure using a rotary evaporator. The crude material is purified as described under Variant A.; Following the General Procedure of Description 6 (Variant C), 4-ethyl-3-iodo- aniline (40b) was prepared from l-ethyl-2-iodo-4-nitro-benzene (40a) (9.0 g, 32.0 mmol), nickel(II) acetate tetrahydrate (Ni(OAc)2 4H20) (1.08 g, 4.3 mmol), and sodium borohydride (NaBH4) (7.0 g, 185 mmol) in a mixture of acetonitrile (MeCN)/water (110 mL, 10: 1, v/v). After extractive work-up and purification by silica gel column chromatography using an ethyl acetate (EtOAc)/hexane gradient as eluent (EtOAc/hexane = 1 :5? EtOAc/hexane = 1 :4, v/v), 5.2 g (65% yield) of the target compound (40b) were obtained as a yellow solid. M.p.: 35.2-38.0C. Rf. -0.30 (EtOAc/hexane = 1 :4, v/v). 1H MR (300 MHz, CDC13): delta 7.18 (d, J = 2.7 Hz, 1H), 6.98 (d, J= 8.4 Hz, 1H), 6.62 (dd, J= 8.1, 2.7 Hz, 1H), 2.62 (q, J= 7.5 Hz, 2H), 2.54 (br. s, 2H), 1.15 (t, J= 7.2 Hz, 3H) ppm. LC/MS: Rt = 2.040 min; -100% purity by AUC at lambda = 254 nm; ESI (pos.) mlz = 248.10 (M+H+)+. |
methyl 4-amino-2-bromobenzoate m.p. 93-95 C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With ammonium chloride; In aqueous 2-propanol; | Example 54C methyl-2-bromo-4-aminobenzoate A solution of methyl 2-bromo-4-nitrobenzoate (970 mg, 3.73 mmol), iron powder 1.25 g (22.4 mmol) and ammonium chloride (239 mg, 4.48 mmol) in aqueous 2-propanol (20%, 15 mL) was heated to reflux for 30 minutes, cooled, filtered, and concentrated under reduced pressure. The residue was partitioned between diethyl ether (20 mL) and water (5 mL). The organic layer was washed with brine (1*5 mL), dried (MgSO4), filtered, and concentrated to provide the titled compound (813 mg, 95%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With acetic acid; triethylamine; In dichloromethane; | Step b) Methyl 2-Bromo-4-[(2-pyridin-2-yl-benzoyl)amino]benzoate A solution of <strong>[98545-64-3]methyl 2-bromo-4-amino benzoate</strong> (3 g, 13 mmol) and triethylamine (2.5 ml, 18 mmol) in dichloromethane (50 ml) was cooled to 0 and was treated with a slurry of 2-(pyridin-2-yl)benzoyl chloride in dichloromethane (20 ml). Stirring at room temperature was maintained for 4 hours. The reaction was quenched with 20% acetic acid, wash sequentially with saturated aqueous sodium bicarbonate, water then saturated brine solution. The solution was dried (MgSO4), filtered and concentrated in vacuo to give 5.23 g of a white foam. MS (+FAB) m/z 411/413 (M+H)+. Analysis for: C20H15BrN2O3 Calcd: C, 58.41; H, 3.68; N, 6.81. Found: C, 57.73; H, 3.66; N, 6.54. | |
5.23 g (97%) | With acetic acid; triethylamine; In dichloromethane; | Step b) Methyl 2-Bromo-4-[(2-pyridin-2-yl-benzoyl)amino]benzoate A slurry of 2-(pyridin-2-yl)benzoyl chloride in dichloromethane (20 ml) was added to a solution of <strong>[98545-64-3]methyl 2-bromo-4-amino benzoate</strong> (3 g, 13 mmol) and triethylamine (2.5 ml, 18 mmol) in dichloromethane (50 ml) which was cooled to 0 C. Stirring at room temperature was maintained for 4 hours. The reaction was quenched with 20% acetic acid, wash sequentially with saturated aqueous sodium bicarbonate, water then saturated brine solution. The solution was dried (MGSO4), filtered and concentrated in vacuo to give 5.23 g (97%) of a colorless foam. MS (+FAB) m/z: 411/413 (M+H)+. |
5.23 g (97%) | With acetic acid; triethylamine; In dichloromethane; | Step b) Methyl 2-Bromo-4-[(2-pyridin-2-yl-benzoyl)amino]benzoate A slurry of 2-(pyridin-2-yl)benzoyl chloride in dichloromethane (20 ml) was added to a solution of <strong>[98545-64-3]methyl 2-bromo-4-amino benzoate</strong> (3 g, 13 mmol) and triethylamine (2.5 ml, 18 mmol) in dichloromethane (50 ml) which was cooled to 0 C. Stirring at room temperature was maintained for 4 hours. The reaction was quenched with 20% acetic acid, wash sequentially with saturated aqueous sodium bicarbonate, water then saturated brine solution. The solution was dried (MgSO4), filtered and concentrated in vacuo to give 5.23 g (97%) of a colorless foam. MS (+FAB) m/z: 411/413 (M+H)+. Analysis for: C20H15BrN2O3 Calcd: C, 58.41; H, 3.68; N, 6.81. Found: C, 57.73; H, 3.66; N, 6.54. |
In dichloromethane; at 0 - 20℃; for 4h; | A solution of <strong>[98545-64-3]methyl 2-bromo-4-amino benzoate</strong> (3 g, 13 mmol) and triethylamine (2.5 ml, 18 mmol) in dichloromethane (50 ml) was cooled to 0 and was treated with a slurry of 2-(pyridin-2-yl)benzoyl chloride in dichloromethane (20 ml). Stirring at room temperature was maintained for 4 hours. The reaction was quenched with 20% acetic acid, wash sequentially with saturated aqueous sodium bicarbonate, water then saturated brine solution. The solution was dried (MgSO4), filtered and concentrated in vacuo to give 5.23 g of a white foam. MS (+FAB) m/z 411/413 (M+H)+. Analysis for: C20H15BrN2O3 Calcd: C, 58.41; H, 3.68; N, 6.81. Found: C, 57.73; H, 3.66; N, 6.54 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84.3% | In ethyl acetate; for 4h;Reflux; | To a solution of compound 21 (3g, 13.0mmol) in AcOH (50mL) was added 2,5-dimethoxytetrahydrofuran (2.15g, 16.3mmol). The mixture was heated to reflux and stirred for 4h. After evaporation, the mixture was dissolved in EtOAc, washed with saturated NaHCO3, and dried over anhydrous Na2SO4. The residue after rotary evaporation was purified by column chromatography over silica gel to give compound 22 as a solid (3.06g, 84.3% yield).1H NMR (400MHz, CDCl3): delta 7.92 (d, J=8.5Hz, 1H), 7.70 (d, J=2.3Hz, 1H), 7.35 (dd, J=8.5, 2.3Hz, 1H), 7.10 (t, J=2.2Hz, 2H), 6.38 (t, J=2.2Hz, 2H) and 3.93 (s, 3H) ppm; mp: 50-53C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
41.1% | With sulfuric acid; sodium nitrite; In water; ethyl acetate; | Finally, a solution of sulfuric acid (98%, 6 mL) in H2O (75 mL) was added to <strong>[98545-64-3]methyl 4-amino-2-bromobenzoate</strong> (1.23 g, 5.38 mmol) and the resulting suspension was heated to 90 C., then stirred for 5 h at this temperature. The reaction mixture was cooled to 0 C. and a solution of NaNO2 (384 mg, 5.57 mmol) in H2O (5 mL) was added dropwise, then the reaction was allowed to warm to ambient temperature. The reaction mixture was then added to a solution of sulfuric acid (98%, 6 mL) in H2O (75 mL) that had been preheated to 90 C. The reaction mixture was stirred at 90 C. for 1 h, and then allowed to cool. The reaction mixture was partitioned between EtOAc (200 mL) and aqueous solution. The organic layer was collected, dried over anhydrous Na2SO4, filtered, concentrated and purified by silica column chromatography (35% EtOAc in hexanes) to afford compound 10 in 41.1% (508 mg) yield as a light brown solid. 1H-NMR (CDCl3, 400 MHz) delta 7.76 (1H, d, J=8.8 Hz, Ar), 7.09 (1H, s, Ar), 6.75 (1H, d, J=8.8 Hz, Ar), 3.84 (3H, s, OCH3); 13C-NMR (CDCl3, 100 MHz) delta 166.2, 160.3, 133.5, 123.4, 122.1, 121.4, 114.3, 52.1; MS (ESI) m/z Calcd for C8H7BrO3 (M+): 230.0, Found: 231.0 (M+H+). |
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