Structure of YK-4-279
CAS No.: 1037184-44-3
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
YK 4-279 is a potent inhibitor of RNA Helicase A (RHA) that binding to the oncogenic transciption factor EWS-FLI1.
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CAS No. : | 1037184-44-3 |
Formula : | C17H13Cl2NO4 |
M.W : | 366.20 |
SMILES Code : | O=C1NC2=C(C(Cl)=CC=C2Cl)C1(O)CC(C3=CC=C(OC)C=C3)=O |
MDL No. : | MFCD18382120 |
InChI Key : | HLXSCTYHLQHQDJ-UHFFFAOYSA-N |
Pubchem ID : | 44632017 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H317 |
Precautionary Statements: | P280 |
Target |
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In Vitro:
Cell Line
|
Concentration | Treated Time | Description | References |
KHM-5M | 1 µM | 16 hours | YK-4-279 treatment significantly reduced TERT promoter activity. | Front Oncol. 2021 Jun 16;11:649323 |
BCPAP | 1 µM | 24 hours | YK-4-279 treatment significantly inhibited TERT mRNA expression. | Front Oncol. 2021 Jun 16;11:649323 |
COS7 cells | 3-10 µM | 18 hours | Evaluate the effect of YK-4-279 on EWS-FLI1 transcriptional activity, results showed dose-dependent decrease | Nat Med. 2009 Jul;15(7):750-6 |
BTL695 | 5 µM | 18 hours | To analyze the effect of YK-4-279 on TERT promoter activity. Results showed that YK-4-279 significantly downregulated the activity of the C228T TERT promoter. | Neuro Oncol. 2018 Nov 12;20(12):1584-1593 |
A4573 cells | 3 µM YK-4-279 and 10 nM VCR | 18 hours | To evaluate the apoptotic effects of YK-4-279 and VCR combination treatment, which significantly increased the proportion of apoptotic cells | Sci Signal. 2017 Oct 3;10(499):eaam8429 |
COS7 cells | 0.35 µM (IC50 ) | 20 hours | Evaluate the inhibitory effect of YK-4-279 on EWS-FLI1 transcriptional activity in COS7 cells, showing an IC50 of 0.35μM. | J Med Chem. 2014 Dec 26;57(24):10290-303 |
BTL695 | 1.25 µM | 24 and 48 hours | To analyze the effect of YK-4-279 on TERT mRNA expression. Results showed that YK-4-279 significantly downregulated TERT mRNA expression. | Neuro Oncol. 2018 Nov 12;20(12):1584-1593 |
HUVEC (static vs. flow conditions) | 5 µM | 24 hours | YK-4-279 reduced cell numbers and increased apoptosis under static conditions, but not under flow, suggesting flow protects ECs from apoptosis | Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502 |
Fibroblasts derived from diabetes mellitus wound (DMFBs) | 0.3, 1, 3 µM | 24 hours, 48 hours, 72 hours | To evaluate the effect of YK-4-279 on the migration ability and collagen production in DMFBs. Results showed that 1μM YK-4-279 significantly enhanced the migratory ability of DMFBs and upregulated the expression of Collagen I and α-SMA. | J Inflamm Res. 2024 Oct 16;17:7373-7388 |
CHP-100 cells | 0.5-2 µM | 3 days | Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM | Nat Med. 2009 Jul;15(7):750-6 |
A4573 cells | 0.5-2 µM | 3 days | Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM | Nat Med. 2009 Jul;15(7):750-6 |
TC71 cells | 0.5-2 µM | 3 days | Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM | Nat Med. 2009 Jul;15(7):750-6 |
GUES1 cells | 8 µM | 3 days | Evaluate the effect of YK-4-279 on primary ESFT cells, results showed IC50 of 8 μM | Nat Med. 2009 Jul;15(7):750-6 |
ES925 cells | 1 µM | 3 days | Evaluate the effect of YK-4-279 on primary ESFT cells, results showed IC50 of 1 μM | Nat Med. 2009 Jul;15(7):750-6 |
TC71 cells | 0.5-2.0 µM (GI50 ) | 3 days | Evaluate the growth inhibitory effect of YK-4-279 on TC71 cells, showing a GI50 of 0.5-2.0μM. | J Med Chem. 2014 Dec 26;57(24):10290-303 |
TC32 cells | 0.5-2.0 µM (GI50 ) | 3 days | Evaluate the growth inhibitory effect of YK-4-279 on TC32 cells, showing a GI50 of 0.5-2.0μM. | J Med Chem. 2014 Dec 26;57(24):10290-303 |
TC71 cells | 0.88 µM (IC50 ) | 360 days | To investigate the resistance mechanisms of YK-4-279 in TC71 cells, results showed a 7-fold increase in IC50 value, but the resistance was not as stable as in A4573-R cells. | Mol Med Rep. 2020 Mar;21(3):1667-1675 |
MEL624 | 1 µM or 2 µM | 48 hours | YK-4–279 significantly inhibited the growth and invasion of MEL624 cells and reduced MET expression. | Cancer Res. 2021 Apr 15;81(8):2071-2085 |
SKMEL28 | 1 µM or 2 µM | 48 hours | YK-4–279 significantly inhibited the growth and invasion of SKMEL28 cells and reduced MET expression. | Cancer Res. 2021 Apr 15;81(8):2071-2085 |
A375 | 1 µM or 2 µM | 48 hours | YK-4–279 significantly inhibited the growth and invasion of A375 cells and reduced MET expression. | Cancer Res. 2021 Apr 15;81(8):2071-2085 |
Human Umbilical Vein Endothelial Cells (HUVEC) | ≥2.5 µM | 48 hours | YK-4-279 induced HUVEC tube regression and apoptosis, with synergistic effects when combined with inflammatory cytokines | Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502 |
TC32 cells | 3 µM YK-4-279 | 4-8 hours | To assess the effect of YK-4-279 on cell cycle, inducing G2-M arrest | Sci Signal. 2017 Oct 3;10(499):eaam8429 |
KTC-1 | 0.3 µM, 3 µM, 10 µM | 5 days | YK-4-279 significantly inhibited thyroid cancer cell viability, with no significant difference in IC50 values between BRAF mutant and wild-type cell lines. | Front Oncol. 2021 Jun 16;11:649323 |
Rh41 FP-RMS cells | 1 µM | 5 hours | YK-4-279 reduced PAX3-FOXO1 levels on chromatin | Oncogene. 2025 Jan;44(1):19-29 |
Rh30 FP-RMS cells | 1 µM | 5 hours | YK-4-279 reduced PAX3-FOXO1 levels on chromatin | Oncogene. 2025 Jan;44(1):19-29 |
A4573 cells | 0.54 µM (IC50 ) | 550 days | To investigate the resistance mechanisms of YK-4-279 in A4573 cells, results showed a nearly 30-fold increase in IC50 value in A4573-R cells. | Mol Med Rep. 2020 Mar;21(3):1667-1675 |
TC32 cells | 900 nM | 7 days | Evaluate the inhibitory effect of YK-4-279 on ESFT cell growth, results showed IC50 of 900 nM | Nat Med. 2009 Jul;15(7):750-6 |
Normal human fibroblasts and epithelial cell lines (NF-TERT, NF-730, RPE-1) | >20 µM (IC50 ) | 72 hours | Evaluate the effect of YK-4-279 on normal cells; results showed YK-4-279 had no significant inhibitory effect on normal cells | Cancer Lett. 2017 Sep 10;403:74-85 |
Neuroblastoma cell lines (SK-N-AS, SK-N-BE(2)-C, Kelly, etc.) | 0.4 to 2 µM (IC50 ) | 72 hours | Evaluate the effect of YK-4-279 on neuroblastoma cell growth and apoptosis; results showed YK-4-279 inhibited cell growth and induced apoptosis | Cancer Lett. 2017 Sep 10;403:74-85 |
VM48, VM1, VM47, VM18 melanoma cells | 0-50 µM | 72 hours | To evaluate the effect of YK-4-279 on the viability of melanoma cells, results showed that p53/p21 non-responsive melanoma cells were more sensitive to YK-4-279. | Cancers (Basel). 2020 Oct 30;12(11):3205 |
FP-BH Ewing sarcoma cells | 0-50 µM | 72 hours | To evaluate the effect of YK-4-279 on the viability of FP-BH Ewing sarcoma cells, results showed that p53 wild-type FP-BH cells were less sensitive to YK-4-279. | Cancers (Basel). 2020 Oct 30;12(11):3205 |
HCT116 colon cancer cells | 0-50 µM | 72 hours | To evaluate the effect of YK-4-279 on the viability of HCT116 colon cancer cells, results showed that HCT116p53KO cells with p53 deletion were less sensitive to YK-4-279. | Cancers (Basel). 2020 Oct 30;12(11):3205 |
RKO colon cancer cells | 0-50 µM | 72 hours | To evaluate the effect of YK-4-279 on the viability of RKO colon cancer cells, results showed that RKOp53KO cells with p53 deletion were more sensitive to YK-4-279. | Cancers (Basel). 2020 Oct 30;12(11):3205 |
PC-3 cells | 0.1 µM, 0.5 µM, 1.0 µM | 72 hours | Evaluate the effect of YK-4-279 alone or in combination with docetaxel on the growth of PC-3 cells. Results showed that YK-4-279 alone and in combination with docetaxel inhibited the growth of PC-3 cells, with stronger effects in combination. | Int J Med Sci. 2017 Apr 7;14(4):356-366 |
LNCaP cells | 0.1 µM, 0.5 µM, 1.0 µM | 72 hours | Evaluate the effect of YK-4-279 alone or in combination with docetaxel on the growth of LNCaP cells. Results showed that YK-4-279 alone and in combination with docetaxel inhibited the growth of LNCaP cells, with stronger effects in combination. | Int J Med Sci. 2017 Apr 7;14(4):356-366 |
TC32 cells | 3 µM | 8 hours | To evaluate the effect of YK-4-279 on the RNA binding profile in the RHA-EWS-FLI1 complex, it was found that YK-4-279 altered the RNA binding profiles of both RHA and EWS-FLI1. | Nucleic Acids Res. 2015 Jan;43(2):1069-80 |
HeLa cells | 1 nM | time-dependent | To evaluate the helicase activity of RHA, it was found that RHA unwinds double-stranded RNA into single strands in a time- and temperature-dependent manner. | Nucleic Acids Res. 2015 Jan;43(2):1069-80 |
In Vivo:
Species
|
Animal Model
|
Administration | Dosage | Frequency | Description | References |
Mice (C57BL/6J) | Neonatal murine hyaloid vessel regression model | Intravitreal injection | ~1 µL, 10 μM | Single dose (injected at P5, analyzed at P7) | YK-4-279 enhanced hyaloid regression by 40% | Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502 |
Mice | BrafCA;Tyr-CreERT2;Ptenf/f transgenic mouse model | Continuous administration via osmotic pump | 1.6 mg/kg | Continuous for 28 days | YK-4–279 significantly inhibited melanoma progression, reducing tumor thickness and invasion. | Cancer Res. 2021 Apr 15;81(8):2071-2085 |
Mice | BrafCA;Tyr-CreERT2;Ptenflox/flox transgenic mouse model | Intraperitoneal osmotic pump | 1.6 mg/kg or 8 mg/kg | Continuous for 4 weeks | YK-4-279 significantly delayed or blocked melanoma progression. In female mice, the YK-4-279 delay group showed a significant increase in median progression-free survival time from 28 days in the MOCK group to 50 days. In male mice, 60% were progression-free in the YK-4-279 delay group. | Cancers (Basel). 2021 Dec 29;14(1):143 |
Mice | A4573 xenograft model | IP injection | 10, 50 and 100 mg/kg | Once daily for 5 days | To evaluate the therapeutic effect of YK-4-279 on A4573 xenograft tumors, results showed significantly increased CD99 protein expression in all YK-treated groups. | Mol Med Rep. 2020 Mar;21(3):1667-1675 |
BALB/c nude mice | Xenograft mice model | Intraperitoneal injection | 150 mg/kg | Daily until tumor volume reached 1 cm3 | YK-4-279 significantly suppressed xenograft tumor growth and induced tumor cell apoptosis. | Front Oncol. 2021 Jun 16;11:649323 |
SCID/bg mice | ESFT xenograft model | Intraperitoneal injection | 60-75 mg/kg | Three times per week for 14 days | Evaluate the effect of YK-4-279 on ESFT xenograft tumor growth, results showed significant inhibition of tumor growth | Nat Med. 2009 Jul;15(7):750-6 |
SCID/bg mice | A4573 or SKES xenograft model | Intraperitoneal injection | YK-4-279 (10-150 mg/kg) and VCR (1 mg/kg) | Once daily for 5 days on/2 days off or 7 days | To evaluate the effect of YK-4-279 and VCR combination therapy on tumor burden and survival, which significantly reduced tumor volume and increased survival | Sci Signal. 2017 Oct 3;10(499):eaam8429 |
Tags: YK-4-279 | DNA/RNA Synthesis | Apoptosis | apoptosis | anti-proliferation | chiral | enantiomerFT | prostate | breast | pancreatic | inhibitor | 1037184-44-3 |
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