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Chemical Structure| 1037184-44-3 Chemical Structure| 1037184-44-3

Structure of YK-4-279
CAS No.: 1037184-44-3

Chemical Structure| 1037184-44-3

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YK 4-279 is a potent inhibitor of RNA Helicase A (RHA) that binding to the oncogenic transciption factor EWS-FLI1.

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Product Details of YK-4-279

CAS No. :1037184-44-3
Formula : C17H13Cl2NO4
M.W : 366.20
SMILES Code : O=C1NC2=C(C(Cl)=CC=C2Cl)C1(O)CC(C3=CC=C(OC)C=C3)=O
MDL No. :MFCD18382120
InChI Key :HLXSCTYHLQHQDJ-UHFFFAOYSA-N
Pubchem ID :44632017

Safety of YK-4-279

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302-H317
Precautionary Statements:P280

Related Pathways of YK-4-279

DNA

Isoform Comparison

Biological Activity

Target
  • helicase

In Vitro:

Cell Line
Concentration Treated Time Description References
KHM-5M 1 µM 16 hours YK-4-279 treatment significantly reduced TERT promoter activity. Front Oncol. 2021 Jun 16;11:649323
BCPAP 1 µM 24 hours YK-4-279 treatment significantly inhibited TERT mRNA expression. Front Oncol. 2021 Jun 16;11:649323
COS7 cells 3-10 µM 18 hours Evaluate the effect of YK-4-279 on EWS-FLI1 transcriptional activity, results showed dose-dependent decrease Nat Med. 2009 Jul;15(7):750-6
BTL695 5 µM 18 hours To analyze the effect of YK-4-279 on TERT promoter activity. Results showed that YK-4-279 significantly downregulated the activity of the C228T TERT promoter. Neuro Oncol. 2018 Nov 12;20(12):1584-1593
A4573 cells 3 µM YK-4-279 and 10 nM VCR 18 hours To evaluate the apoptotic effects of YK-4-279 and VCR combination treatment, which significantly increased the proportion of apoptotic cells Sci Signal. 2017 Oct 3;10(499):eaam8429
COS7 cells 0.35 µM (IC50 ) 20 hours Evaluate the inhibitory effect of YK-4-279 on EWS-FLI1 transcriptional activity in COS7 cells, showing an IC50 of 0.35μM. J Med Chem. 2014 Dec 26;57(24):10290-303
BTL695 1.25 µM 24 and 48 hours To analyze the effect of YK-4-279 on TERT mRNA expression. Results showed that YK-4-279 significantly downregulated TERT mRNA expression. Neuro Oncol. 2018 Nov 12;20(12):1584-1593
HUVEC (static vs. flow conditions) 5 µM 24 hours YK-4-279 reduced cell numbers and increased apoptosis under static conditions, but not under flow, suggesting flow protects ECs from apoptosis Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502
Fibroblasts derived from diabetes mellitus wound (DMFBs) 0.3, 1, 3 µM 24 hours, 48 hours, 72 hours To evaluate the effect of YK-4-279 on the migration ability and collagen production in DMFBs. Results showed that 1μM YK-4-279 significantly enhanced the migratory ability of DMFBs and upregulated the expression of Collagen I and α-SMA. J Inflamm Res. 2024 Oct 16;17:7373-7388
CHP-100 cells 0.5-2 µM 3 days Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM Nat Med. 2009 Jul;15(7):750-6
A4573 cells 0.5-2 µM 3 days Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM Nat Med. 2009 Jul;15(7):750-6
TC71 cells 0.5-2 µM 3 days Evaluate the effect of YK-4-279 on ESFT cells, results showed IC50 of 0.5-2 μM Nat Med. 2009 Jul;15(7):750-6
GUES1 cells 8 µM 3 days Evaluate the effect of YK-4-279 on primary ESFT cells, results showed IC50 of 8 μM Nat Med. 2009 Jul;15(7):750-6
ES925 cells 1 µM 3 days Evaluate the effect of YK-4-279 on primary ESFT cells, results showed IC50 of 1 μM Nat Med. 2009 Jul;15(7):750-6
TC71 cells 0.5-2.0 µM (GI50 ) 3 days Evaluate the growth inhibitory effect of YK-4-279 on TC71 cells, showing a GI50 of 0.5-2.0μM. J Med Chem. 2014 Dec 26;57(24):10290-303
TC32 cells 0.5-2.0 µM (GI50 ) 3 days Evaluate the growth inhibitory effect of YK-4-279 on TC32 cells, showing a GI50 of 0.5-2.0μM. J Med Chem. 2014 Dec 26;57(24):10290-303
TC71 cells 0.88 µM (IC50 ) 360 days To investigate the resistance mechanisms of YK-4-279 in TC71 cells, results showed a 7-fold increase in IC50 value, but the resistance was not as stable as in A4573-R cells. Mol Med Rep. 2020 Mar;21(3):1667-1675
MEL624 1 µM or 2 µM 48 hours YK-4–279 significantly inhibited the growth and invasion of MEL624 cells and reduced MET expression. Cancer Res. 2021 Apr 15;81(8):2071-2085
SKMEL28 1 µM or 2 µM 48 hours YK-4–279 significantly inhibited the growth and invasion of SKMEL28 cells and reduced MET expression. Cancer Res. 2021 Apr 15;81(8):2071-2085
A375 1 µM or 2 µM 48 hours YK-4–279 significantly inhibited the growth and invasion of A375 cells and reduced MET expression. Cancer Res. 2021 Apr 15;81(8):2071-2085
Human Umbilical Vein Endothelial Cells (HUVEC) ≥2.5 µM 48 hours YK-4-279 induced HUVEC tube regression and apoptosis, with synergistic effects when combined with inflammatory cytokines Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502
TC32 cells 3 µM YK-4-279 4-8 hours To assess the effect of YK-4-279 on cell cycle, inducing G2-M arrest Sci Signal. 2017 Oct 3;10(499):eaam8429
KTC-1 0.3 µM, 3 µM, 10 µM 5 days YK-4-279 significantly inhibited thyroid cancer cell viability, with no significant difference in IC50 values between BRAF mutant and wild-type cell lines. Front Oncol. 2021 Jun 16;11:649323
Rh41 FP-RMS cells 1 µM 5 hours YK-4-279 reduced PAX3-FOXO1 levels on chromatin Oncogene. 2025 Jan;44(1):19-29
Rh30 FP-RMS cells 1 µM 5 hours YK-4-279 reduced PAX3-FOXO1 levels on chromatin Oncogene. 2025 Jan;44(1):19-29
A4573 cells 0.54 µM (IC50 ) 550 days To investigate the resistance mechanisms of YK-4-279 in A4573 cells, results showed a nearly 30-fold increase in IC50 value in A4573-R cells. Mol Med Rep. 2020 Mar;21(3):1667-1675
TC32 cells 900 nM 7 days Evaluate the inhibitory effect of YK-4-279 on ESFT cell growth, results showed IC50 of 900 nM Nat Med. 2009 Jul;15(7):750-6
Normal human fibroblasts and epithelial cell lines (NF-TERT, NF-730, RPE-1) >20 µM (IC50 ) 72 hours Evaluate the effect of YK-4-279 on normal cells; results showed YK-4-279 had no significant inhibitory effect on normal cells Cancer Lett. 2017 Sep 10;403:74-85
Neuroblastoma cell lines (SK-N-AS, SK-N-BE(2)-C, Kelly, etc.) 0.4 to 2 µM (IC50 ) 72 hours Evaluate the effect of YK-4-279 on neuroblastoma cell growth and apoptosis; results showed YK-4-279 inhibited cell growth and induced apoptosis Cancer Lett. 2017 Sep 10;403:74-85
VM48, VM1, VM47, VM18 melanoma cells 0-50 µM 72 hours To evaluate the effect of YK-4-279 on the viability of melanoma cells, results showed that p53/p21 non-responsive melanoma cells were more sensitive to YK-4-279. Cancers (Basel). 2020 Oct 30;12(11):3205
FP-BH Ewing sarcoma cells 0-50 µM 72 hours To evaluate the effect of YK-4-279 on the viability of FP-BH Ewing sarcoma cells, results showed that p53 wild-type FP-BH cells were less sensitive to YK-4-279. Cancers (Basel). 2020 Oct 30;12(11):3205
HCT116 colon cancer cells 0-50 µM 72 hours To evaluate the effect of YK-4-279 on the viability of HCT116 colon cancer cells, results showed that HCT116p53KO cells with p53 deletion were less sensitive to YK-4-279. Cancers (Basel). 2020 Oct 30;12(11):3205
RKO colon cancer cells 0-50 µM 72 hours To evaluate the effect of YK-4-279 on the viability of RKO colon cancer cells, results showed that RKOp53KO cells with p53 deletion were more sensitive to YK-4-279. Cancers (Basel). 2020 Oct 30;12(11):3205
PC-3 cells 0.1 µM, 0.5 µM, 1.0 µM 72 hours Evaluate the effect of YK-4-279 alone or in combination with docetaxel on the growth of PC-3 cells. Results showed that YK-4-279 alone and in combination with docetaxel inhibited the growth of PC-3 cells, with stronger effects in combination. Int J Med Sci. 2017 Apr 7;14(4):356-366
LNCaP cells 0.1 µM, 0.5 µM, 1.0 µM 72 hours Evaluate the effect of YK-4-279 alone or in combination with docetaxel on the growth of LNCaP cells. Results showed that YK-4-279 alone and in combination with docetaxel inhibited the growth of LNCaP cells, with stronger effects in combination. Int J Med Sci. 2017 Apr 7;14(4):356-366
TC32 cells 3 µM 8 hours To evaluate the effect of YK-4-279 on the RNA binding profile in the RHA-EWS-FLI1 complex, it was found that YK-4-279 altered the RNA binding profiles of both RHA and EWS-FLI1. Nucleic Acids Res. 2015 Jan;43(2):1069-80
HeLa cells 1 nM time-dependent To evaluate the helicase activity of RHA, it was found that RHA unwinds double-stranded RNA into single strands in a time- and temperature-dependent manner. Nucleic Acids Res. 2015 Jan;43(2):1069-80

In Vivo:

Species
Animal Model
Administration Dosage Frequency Description References
Mice (C57BL/6J) Neonatal murine hyaloid vessel regression model Intravitreal injection ~1 µL, 10 μM Single dose (injected at P5, analyzed at P7) YK-4-279 enhanced hyaloid regression by 40% Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26494-26502
Mice BrafCA;Tyr-CreERT2;Ptenf/f transgenic mouse model Continuous administration via osmotic pump 1.6 mg/kg Continuous for 28 days YK-4–279 significantly inhibited melanoma progression, reducing tumor thickness and invasion. Cancer Res. 2021 Apr 15;81(8):2071-2085
Mice BrafCA;Tyr-CreERT2;Ptenflox/flox transgenic mouse model Intraperitoneal osmotic pump 1.6 mg/kg or 8 mg/kg Continuous for 4 weeks YK-4-279 significantly delayed or blocked melanoma progression. In female mice, the YK-4-279 delay group showed a significant increase in median progression-free survival time from 28 days in the MOCK group to 50 days. In male mice, 60% were progression-free in the YK-4-279 delay group. Cancers (Basel). 2021 Dec 29;14(1):143
Mice A4573 xenograft model IP injection 10, 50 and 100 mg/kg Once daily for 5 days To evaluate the therapeutic effect of YK-4-279 on A4573 xenograft tumors, results showed significantly increased CD99 protein expression in all YK-treated groups. Mol Med Rep. 2020 Mar;21(3):1667-1675
BALB/c nude mice Xenograft mice model Intraperitoneal injection 150 mg/kg Daily until tumor volume reached 1 cm3 YK-4-279 significantly suppressed xenograft tumor growth and induced tumor cell apoptosis. Front Oncol. 2021 Jun 16;11:649323
SCID/bg mice ESFT xenograft model Intraperitoneal injection 60-75 mg/kg Three times per week for 14 days Evaluate the effect of YK-4-279 on ESFT xenograft tumor growth, results showed significant inhibition of tumor growth Nat Med. 2009 Jul;15(7):750-6
SCID/bg mice A4573 or SKES xenograft model Intraperitoneal injection YK-4-279 (10-150 mg/kg) and VCR (1 mg/kg) Once daily for 5 days on/2 days off or 7 days To evaluate the effect of YK-4-279 and VCR combination therapy on tumor burden and survival, which significantly reduced tumor volume and increased survival Sci Signal. 2017 Oct 3;10(499):eaam8429

Protocol

Bio Calculators
Preparing Stock Solutions 1mg 5mg 10mg

1 mM

5 mM

10 mM

2.73mL

0.55mL

0.27mL

13.65mL

2.73mL

1.37mL

27.31mL

5.46mL

2.73mL

Dissolving Methods
Please choose the appropriate dissolution scheme according to your animal administration guide.For the following dissolution schemes, clear stock solution should be prepared according to in vitro experiments, and then cosolvent should be added in turn:

in order to ensure the reliability of the experimental results, the clarified stock solution can be properly preserved according to the storage conditions; The working fluid for in vivo experiment is recommended to be prepared now and used on the same day;

The percentage shown in front of the following solvent refers to the volume ratio of the solvent in the final solution; If precipitation or precipitation occurs in the preparation process, it can be assisted by heating and/or ultrasound.
Protocol 1
Protocol 2

References

 

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