Purity | Size | Price | VIP Price | USA Stock *0-1 Day | Global Stock *5-7 Days | Quantity | |||||
{[ item.p_purity ]} | {[ item.pr_size ]} |
{[ getRatePrice(item.pr_usd, 1,1) ]} {[ getRatePrice(item.pr_usd,item.pr_rate,item.mem_rate) ]} |
{[ getRatePrice(item.pr_usd, 1,1) ]} | Inquiry {[ getRatePrice(item.pr_usd,item.pr_rate,item.mem_rate) ]} {[ getRatePrice(item.pr_usd,1,item.mem_rate) ]} | {[ item.pr_usastock ]} | Inquiry - | {[ item.pr_chinastock ]} | Inquiry - |
* Storage: {[proInfo.prStorage]}
CAS No. : | 106984-09-2 | MDL No. : | MFCD07779195 |
Formula : | C13H27NO6 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | XKKDQIAPTPFIGW-UHFFFAOYSA-N |
M.W : | 293.36 | Pubchem ID : | 10968359 |
Synonyms : |
PROTAC Linker 12
|
Chemical Name : | tert-Butyl (2-(2-(2-(2-hydroxyethoxy)ethoxy)ethoxy)ethyl)carbamate |
Num. heavy atoms : | 20 |
Num. arom. heavy atoms : | 0 |
Fraction Csp3 : | 0.92 |
Num. rotatable bonds : | 14 |
Num. H-bond acceptors : | 6.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 73.54 |
TPSA : | 86.25 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -8.23 cm/s |
Log Po/w (iLOGP) : | 3.6 |
Log Po/w (XLOGP3) : | -0.2 |
Log Po/w (WLOGP) : | 0.55 |
Log Po/w (MLOGP) : | -0.34 |
Log Po/w (SILICOS-IT) : | 1.28 |
Consensus Log Po/w : | 0.98 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 1.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -0.61 |
Solubility : | 72.2 mg/ml ; 0.246 mol/l |
Class : | Very soluble |
Log S (Ali) : | -1.15 |
Solubility : | 20.5 mg/ml ; 0.07 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -2.71 |
Solubility : | 0.573 mg/ml ; 0.00195 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 3.24 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | at 20℃; for 2.16667 h; | EXAMPLE 5 Synthesis of 4-(2-(2-(2-(2-aminoethoxy)ethoxy)ethoxy)ethoxy)-2-(2,6-dioxopiperidin-3- yl)isoindoline- 1 ,3-dione Step 1: Synthesis of S9 To a round-bottom flask, 2-(2-(2-(2-aminoethoxy)ethoxy)ethoxy)ethanol (2.9 g, 15 mmol) was diluted in 10 mL of ethanol. Di-tert-butyl dicarbonate (3.6 g, 16.5 mmol) was dissolved in 10 mL of ethanol and the solution was dropwised within a period of 10 min. The resulting reaction mixture was stirred at room temperature for 2 h. After evaporation of the solvent, the residue was purified by column chromatography with DCM/ MeOH to obtain S9 as colorless oil (3.69 g, 80percent yield). 1H NMR (400 MHz, CDCI3) δ (ppm) 5.49 (s, 1H), 3.46-3.25 (m, 14H), 3.02 (s, 2H), 1.18 (s, 9H); ESI-MS calculated for Ci3H27NNa06 [M+Na]+ = 316.17, obtained: 316.18. |
44% | With sodium hydroxide In tetrahydrofuran; water at 20℃; for 16 h; | Into a 100-mL round-bottom flask, was placed a solution of 2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethan-1-ol (3.0 g, 15.52 mmol, 1.00 equiv) in tetrahydrofuran/water (30/30 mL), di-tert-butyl dicarbonate (3.6 g, 16.49 mmol, 1.05 equiv), sodium hydroxide (2.5 g, 62.50 mmol, 4.00 equiv). The resulting solution was stirred for 16 h at room temperature. The resulting solution was diluted with water (20 mL) and extracted with ethyl acetate (20 mL*3). The combined organic layers were washed with brine (20 mL*1), dried over anhydrous sodium sulfate and concentrated under vacuum. The residue was applied onto a silica gel column and eluted with ethyl acetate/petroleum ether (1:1). This resulted in 2.0 g (44percent) of tert-butyl N-(2-[2-[2-(2-hydroxyethoxy)ethoxy]ethoxy]ethyl)carbamate as light yellow oil. LC-MS (ES+): m/z 294.05 [MH+], tR=0.93 min, (1.9 minute run). |
15% | at 20℃; for 18 h; | To a stirred solution of 87 2-(2-(2-(2-aminoethoxy)ethoxy)ethoxy)ethanol (100μL, 0.55mmol) in 88 dioxane (1mL) was added Boc2O (152μL, 0.66mmol). The mixture was stirred for 18hat rt and then evaporated under reduced pressure. The crude was taken up in DCM (6mL), washed with H2O (2×6mL) and brine (1×5mL), dried over MgSO4, filtered and evaporated under reduced pressure. The crude product was purified using flash silica column chromatography (99:1 DCM:MeOH) to yield the desired 89 tert-butyl N-(2-{2-[2-(2-hydroxyethoxy)ethoxy]ethoxy}ethyl)carbamate (24mg, 81.8μmol, 15percent), as a pale yellow oil (Rf 0.52, 9:1 DCM:MeOH). 1H NMR (400MHz, CDCl3) δ 3.75–3.67 (m, 4H, O-CH2), 3.66–3.57 (m, 8H, O-CH2CH2-O), 3.52 (t, J=5.2Hz, 2H, O-CH2), 3.29 (t, J=5.2Hz, 2H, NH-CH2), 1.43 (s, 9H, CH3 t Bu). 13C NMR (101MHz, CDCl3) δ 156.31, 79.19, 72.77, 70.72, 70.67, 70.55, 70.36, 70.20, 61.76, 40.67, 28.56. HRMS-ESI calculated for C13H27NNaO6 [M+Na]+ 316.1731, found m/z 316.1738. A solution of 91 bromine (7.3μL, 0.14mmol) in 67 DCM (0.2mL) at 0°C was added to a solution of 92 triphenylphosphine (37mg, 0.14mmol) and 93 Et3N (20μL, 0.14mmol) in anhydrous DCM (0.2mL) at 0°C. Following stirring at 0°C for 30min, a solution of 89 tert-butyl N-(2-{2-[2-(2-hydroxyethoxy)ethoxy]ethoxy}ethyl)carbamate (42mg, 0.14mmol) in DCM (0.2mL) was added dropwise. After stirring at 0°C for 2h, the mixture was evaporated under reduced pressure. The crude product was purified using flash silica column chromatography (5:1 hexane:EA) to yield the desired 94 tert-butyl N-(2-{2-[2-(2-bromoethoxy)ethoxy]ethoxy}ethyl)carbamate (13mg, 36.5μmol, 26percent) as a colourless oil. 1H NMR (400MHz, CDCl3) δ 5.03 (br s, 1H, NH), 3.81 (t, J=6.3Hz, 2H, O-CH2), 3.73–3.58 (m, 8H, O-CH2CH2-O), 3.54 (t, J=5.1Hz, 2H, O-CH2), 3.47 (tJ=6.3, 1.2Hz, 2H, CH2Br), 3.31 (q, J=5.6Hz, 2H, NH-CH2), 1.44 (s, 9H, CH3 t Bu). HRMS-ESI calculated for C13H26BrNNaO5 [M+Na]+ 378.0887, found m/z 378.0894. To a solution of 9e (13mg, 35.1μmol) in anhydrous DMF (0.7mL) was added NaH (60percent by mass dispersion in mineral oil) (5.5mg, 0.14mmol). After stirring for 30min, a solution of tert-butyl N-(2-{2-[2-(2-bromoethoxy)ethoxy]ethoxy}ethyl)carbamate (12.5mg, 35.1μmol) in anhydrous DMF (0.6mL) was added. The reaction mixture was stirred for 18h, then quenched with H2O (1.5mL), extracted with EA (4×2mL), washed with H2O (2×7mL), dried over MgSO4, filtered and evaporated under reduced pressure. The crude product was purified using flash silica column chromatography (99:1 DCM:MeOH) and semi-preparative RP-HPLC to yield the desired 17 (6.88mg, 10.7μmol, 31percent), as a white solid. 1H NMR (400MHz, DMSO-d6) δ 7.97 (s, 1H, ArH indole), 7.81–7.75 (m, 3H, ArH indole and MeOPh), 7.58 (d, J=9.0Hz, 1H, ArH indole), 7.12–7.05 (m, 2H, ArH MeOPh), 6.95 (dd, J=8.9, 2.5Hz, 1H, ArH indole), 6.74 (br s, 1H, NH), 4.21–4.07 (m, 4H, N1-CH2 & indole-O-CH2), 3.86 (s, 3H, O-CH3), 3.85–3.75 (m, 4H, O-CH2 & O-CH2 THP), 3.65–3.45 (m, 8H, O-CH2CH2-O), 3.37 (t, J=6.1Hz, 2H, O-CH2), 3.19 (td, J=11.7, 2.0Hz, 2H, O-CH2 THP), 3.05 (q, J=6.0Hz, 2H, NH-CH2), 2.13–2.02 (m, 1H, CH THP), 1.41–1.21 (m, 13H, O-CH2CH2 THP, CH3 t Bu). HRMS-ESI calculated for C35H48N2NaO9 [M+Na]+ 663.3252, found m/z 663.3247. Analytical RP-HPLC Rt=21.00min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | Stage #1: With sodium hydride In tetrahydrofuran at 0℃; for 1 h; Stage #2: at -5 - 50℃; for 24 h; |
Weigh diethylene glycol(159g1.5mol) in a three-necked flask,500 ml of dry tetrahydrofuran was added,Cooled to below 0 °, a small amount of sodium hydride (24 g, 1 mol)After 1 hour of reaction, the mixture was cooled to -5 °,Boc-DEG-MS (141.5 g, 0.5 mol) was slowly added dropwise,After completion of the dropwise addition, the reaction was heated at 50 ° for 24 hours,TLC, the reaction was completed (developing solvent petroleum ether: ethyl acetate = 1: 1), 1 L of water was added, extracted twice with ethyl acetate,The ethyl acetate layers were combined, dried,Recovery was carried out under reduced pressure to give BOC-NH-PEG4105 g (yield 72percent) |
[ 127828-22-2 ]
tert-Butyl (2-(2-aminoethoxy)ethyl)carbamate
Similarity: 0.97
[ 1076199-21-7 ]
tert-Butyl (2-(2-(2-(2-bromoethoxy)ethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 108466-89-3 ]
2,2-Dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-oic acid
Similarity: 0.88
[ 165963-71-3 ]
tert-Butyl (2-(2-(2-bromoethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 462100-06-7 ]
2,2-Dimethyl-4-oxo-3,8,11,14-tetraoxa-5-azahexadecan-16-oic acid
Similarity: 0.88
[ 127828-22-2 ]
tert-Butyl (2-(2-aminoethoxy)ethyl)carbamate
Similarity: 0.97
[ 1076199-21-7 ]
tert-Butyl (2-(2-(2-(2-bromoethoxy)ethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 108466-89-3 ]
2,2-Dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-oic acid
Similarity: 0.88
[ 165963-71-3 ]
tert-Butyl (2-(2-(2-bromoethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 462100-06-7 ]
2,2-Dimethyl-4-oxo-3,8,11,14-tetraoxa-5-azahexadecan-16-oic acid
Similarity: 0.88
[ 147252-84-4 ]
tert-Butyl (1-hydroxypropan-2-yl)carbamate
Similarity: 0.88
[ 125414-41-7 ]
tert-Butyl (1,3-dihydroxypropan-2-yl)carbamate
Similarity: 0.85
[ 95656-86-3 ]
tert-Butyl (2-hydroxypropyl)carbamate
Similarity: 0.85
[ 57561-39-4 ]
tert-Butyl (2-hydroxyethyl)(methyl)carbamate
Similarity: 0.83
[ 144912-84-5 ]
tert-Butyl (3-amino-2-hydroxypropyl)carbamate
Similarity: 0.83
[ 127828-22-2 ]
tert-Butyl (2-(2-aminoethoxy)ethyl)carbamate
Similarity: 0.97
[ 1076199-21-7 ]
tert-Butyl (2-(2-(2-(2-bromoethoxy)ethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 108466-89-3 ]
2,2-Dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-oic acid
Similarity: 0.88
[ 165963-71-3 ]
tert-Butyl (2-(2-(2-bromoethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 462100-06-7 ]
2,2-Dimethyl-4-oxo-3,8,11,14-tetraoxa-5-azahexadecan-16-oic acid
Similarity: 0.88
[ 127828-22-2 ]
tert-Butyl (2-(2-aminoethoxy)ethyl)carbamate
Similarity: 0.97
[ 1076199-21-7 ]
tert-Butyl (2-(2-(2-(2-bromoethoxy)ethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 108466-89-3 ]
2,2-Dimethyl-4-oxo-3,8,11-trioxa-5-azatridecan-13-oic acid
Similarity: 0.88
[ 165963-71-3 ]
tert-Butyl (2-(2-(2-bromoethoxy)ethoxy)ethyl)carbamate
Similarity: 0.88
[ 462100-06-7 ]
2,2-Dimethyl-4-oxo-3,8,11,14-tetraoxa-5-azahexadecan-16-oic acid
Similarity: 0.88