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CAS No. : | 1090903-58-4 | MDL No. : | MFCD32011634 |
Formula : | C11H10BrNO2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | PXWCGFMBIZJCOC-UHFFFAOYSA-N |
M.W : | 268.11 | Pubchem ID : | 59497666 |
Synonyms : |
|
Num. heavy atoms : | 15 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.18 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 2.0 |
Num. H-bond donors : | 0.0 |
Molar Refractivity : | 62.18 |
TPSA : | 31.23 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | Yes |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.13 cm/s |
Log Po/w (iLOGP) : | 2.67 |
Log Po/w (XLOGP3) : | 2.54 |
Log Po/w (WLOGP) : | 2.73 |
Log Po/w (MLOGP) : | 2.36 |
Log Po/w (SILICOS-IT) : | 2.46 |
Consensus Log Po/w : | 2.55 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.41 |
Solubility : | 0.103 mg/ml ; 0.000385 mol/l |
Class : | Soluble |
Log S (Ali) : | -2.84 |
Solubility : | 0.385 mg/ml ; 0.00144 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -3.77 |
Solubility : | 0.045 mg/ml ; 0.000168 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 0.0 |
Synthetic accessibility : | 1.76 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | Stage #1: methyl 5-bromo-1H-indole-7-carboxylate With sodium hydride In N,N-dimethyl-formamide at 0℃; for 0.25h; Stage #2: methyl iodide In N,N-dimethyl-formamide for 0.5h; | 66 A solution of the S-bromo-indole^-carboxylic acid methyl ester (300 mg, 1.18 mmol) in DMF (15 mL) was cooled to O0C under nitrogen and treated with sodium hydride (60% in mineral oil) (56.6 gm, 1.4 mmol). After stirring for 15 minutes the iodomethane (0.08 mL, 1.3 mmol) was introduced and the cooling bath was removed (reaction became light purple). After 30 minutes the reaction was quenched with water (5ml) and then concentrated to reduce the volume of DMF. The reaction was poured into water (1.6L) and EtOAc (200ml). The layers were separated and the aqueous phase was extracted with EtOAc (3x200ml). The combined organics were washed with water (3x) and then dried (MgSO4). The solution was filtered and the filterate was concentrated. The residue was purfied by CombiFlash with 10% EtOAc in Hexane as the eluent to afford the desirable product 5-Bromo-l -methyl- l//-indole-7-carboxylic acid methyl ester (290 mg, 92%) as a white solid. |
32% | Stage #1: methyl 5-bromo-1H-indole-7-carboxylate With sodium hydride In N,N-dimethyl-formamide; mineral oil at 0℃; for 0.25h; Stage #2: methyl iodide In N,N-dimethyl-formamide; mineral oil at 25℃; for 0.5h; | To a solution of methyl 5-bromoindole-7-carboxylate (4.5 g, 17.7 mmol) in DMF (100 mL) at 0 °C was added NaH (1.06 g, 26.6 mmol, 60% purity). The mixture was stirred at 0 °C for 15 minutes. Iodomethane (4 g, 28.2 mmol, 1.75 mL) was added and the mixture was stirred at 25 °C for 30 minutes. TLC (petroleum ether : ethyl acetate=10:1, Rf = 0.35) indicated that starting material was consumed completely and a major new spot with lower polarity was detected. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (100 mL x 2). The combined organic phase was concentrated in vacuum to afford methyl 5-bromo-1,N-methylindole-7-carboxylate (1.5 g, 32% yield) as a brown liquid. 1H NMR 400 MHz DMSO = 7.99 (s, 1H), 7.58 (s, 1H), 7.46 (d, J=3.2 Hz, 1H), 6.56 (d, J=3.2 Hz, 1H), 3.91(s, 3H), 3.79 (s, 3H). ESI-MS (m/z): 268.0 (M+H)+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | Stage #1: methyl 5-bromo-1,N-methylindole-7-carboxylate With lithium aluminium tetrahydride In diethyl ether at 0 - 20℃; Stage #2: With water; sodium hydrogencarbonate In diethyl ether | 66 To a solution of 5-Bromo-l -methyl- l//-indole-7-carboxylic acid methyl ester (260 mg, 0.97 mmol) in Et2θ (50 mL) was added LAH (40.5 mg, 1.1 mmol) at 0 C under nitrogen atmosphere. The solution was warmed to room temperature. Sat. NaHCO3 was added and the solution was extracted with EtOAc. The combined organic layer was dried with MgSO4 and was filtered. The filtrate was concentrated and the residue was purified by CombiFlash with 50% EtOAc in Hexane as the eluent to afford the desirable product (5-Bromo-l -methyl- l//-indol-7-yl)- methanol (200 mg, 86%) as colorless oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1.1: sec.-butyllithium; N,N,N,N,-tetramethylethylenediamine / tetrahydrofuran / 1.5 h / -78 °C 1.2: 12 h / 20 °C 2.1: N-Bromosuccinimide / dichloromethane / 16 h / 20 °C 3.1: trifluoroacetic acid / 16 h / 25 °C 4.1: manganese(IV) oxide / dichloromethane / 48 h / 25 °C 5.1: sodium hydride / N,N-dimethyl-formamide; mineral oil / 0.25 h / 0 °C 5.2: 0.5 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1.1: N-Bromosuccinimide / dichloromethane / 16 h / 20 °C 2.1: trifluoroacetic acid / 16 h / 25 °C 3.1: manganese(IV) oxide / dichloromethane / 48 h / 25 °C 4.1: sodium hydride / N,N-dimethyl-formamide; mineral oil / 0.25 h / 0 °C 4.2: 0.5 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1.1: trifluoroacetic acid / 16 h / 25 °C 2.1: manganese(IV) oxide / dichloromethane / 48 h / 25 °C 3.1: sodium hydride / N,N-dimethyl-formamide; mineral oil / 0.25 h / 0 °C 3.2: 0.5 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1.1: manganese(IV) oxide / dichloromethane / 48 h / 25 °C 2.1: sodium hydride / N,N-dimethyl-formamide; mineral oil / 0.25 h / 0 °C 2.2: 0.5 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 8 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere 4: caesium carbonate; 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene; tris-(dibenzylideneacetone)dipalladium(0) / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 5: sodium hydroxide; water / tetrahydrofuran; methanol / 2 h / 25 °C 6: ammonium chloride; N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate / N,N-dimethyl-formamide / 12 h / 25 °C 7: ammonium chloride; zinc / water; acetone / 0.08 h / 25 °C / Inert atmosphere 8: N-ethyl-N,N-diisopropylamine / tetrahydrofuran / 0.25 h / 0 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere 4: caesium carbonate; 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene; tris-(dibenzylideneacetone)dipalladium(0) / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere 4: caesium carbonate; 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene; tris-(dibenzylideneacetone)dipalladium(0) / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 5: sodium hydroxide; water / tetrahydrofuran; methanol / 2 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere 4: caesium carbonate; 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene; tris-(dibenzylideneacetone)dipalladium(0) / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 5: sodium hydroxide; water / tetrahydrofuran; methanol / 2 h / 25 °C 6: ammonium chloride; N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate / N,N-dimethyl-formamide / 12 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 7 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere 4: caesium carbonate; 4,5-bis(diphenylphosphino)-9,9-dimethylxanthene; tris-(dibenzylideneacetone)dipalladium(0) / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 5: sodium hydroxide; water / tetrahydrofuran; methanol / 2 h / 25 °C 6: ammonium chloride; N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate / N,N-dimethyl-formamide / 12 h / 25 °C 7: ammonium chloride; zinc / water; acetone / 0.08 h / 25 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere 3: sodium carbonate; bis-triphenylphosphine-palladium(II) chloride / water; 1,4-dioxane / 12 h / 80 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With N-chloro-succinimide In dichloromethane at 25℃; for 12h; | To a solution of methyl 5-bromo-1,N-methylindole-7-carboxylate (1.5 g, 5.59 mmol) in DCM (15 mL) was added NCS (970 mg, 7.27 mmol). The mixture was stirred at 25 °C for 12 hours. TLC (etroleum ether: ethyl acetate=10:1, Rf = 0.3) indicated that starting material was consumed completely and a major new spot with higher polarity was detected. The reaction was quenched with water (20 mL) and extracted with DCM (10 mL x 2). The combined organic phase was concentrated under reduced pressure to afford methyl 5-bromo-3-chloro-1,N-methylindole-7-carboxylate (1.6 g, 95% yield) as a brown solid. 1H NMR (400 MHz DMSO) = 7.86 (s, 1H), 7.72 (s, 1H), 7.68 (s, 1H), 3.92 (s, 3H), 3.78 (s, 3H). ESI-MS (m/z): 301.9 (M+H)+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: N-chloro-succinimide / dichloromethane / 12 h / 25 °C 2: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 12 h / 100 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: triethylamine / dichloromethane / 18 h / 0 - 20 °C 2.1: sec.-butyllithium; N,N,N,N,-tetramethylethylenediamine / tetrahydrofuran / 1.5 h / -78 °C 2.2: 12 h / 20 °C 3.1: N-Bromosuccinimide / dichloromethane / 16 h / 20 °C 4.1: trifluoroacetic acid / 16 h / 25 °C 5.1: manganese(IV) oxide / dichloromethane / 48 h / 25 °C 6.1: sodium hydride / N,N-dimethyl-formamide; mineral oil / 0.25 h / 0 °C 6.2: 0.5 h / 25 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2: manganese(IV) oxide / acetone / 3 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2: manganese(IV) oxide / acetone / 3 h / 20 °C 3: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2.1: manganese(IV) oxide / acetone / 3 h / 20 °C 3.1: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C 4.1: acetonitrile / 5 h / 20 °C 5.1: potassium carbonate / N,N-dimethyl-formamide / 2 h / 20 - 100 °C 6.1: lithium hydroxide; water / 1,4-dioxane / 4 h / 20 °C 6.2: 0 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2: manganese(IV) oxide / acetone / 3 h / 20 °C 3: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C 4: acetonitrile / 5 h / 20 °C 5: potassium carbonate / N,N-dimethyl-formamide / 2 h / 20 - 100 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 8 steps 1.1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2.1: manganese(IV) oxide / acetone / 3 h / 20 °C 3.1: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C 4.1: acetonitrile / 5 h / 20 °C 5.1: potassium carbonate / N,N-dimethyl-formamide / 2 h / 20 - 100 °C 6.1: lithium hydroxide; water / 1,4-dioxane / 4 h / 20 °C 6.2: 0 °C 7.1: N-Bromosuccinimide / <i>tert</i>-butyl alcohol / 1 h / 40 °C 8.1: acetic acid; zinc / 0.5 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2: manganese(IV) oxide / acetone / 3 h / 20 °C 3: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C 4: acetonitrile / 5 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 7 steps 1.1: lithium aluminium tetrahydride / diethyl ether / 0 - 20 °C 2.1: manganese(IV) oxide / acetone / 3 h / 20 °C 3.1: sodium tris(acetoxy)borohydride / methanol; dichloromethane / 12 h / 0 - 20 °C 4.1: acetonitrile / 5 h / 20 °C 5.1: potassium carbonate / N,N-dimethyl-formamide / 2 h / 20 - 100 °C 6.1: lithium hydroxide; water / 1,4-dioxane / 4 h / 20 °C 6.2: 0 °C 7.1: N-Bromosuccinimide / <i>tert</i>-butyl alcohol / 1 h / 40 °C |
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