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Structure of 2-(Aminooxy)ethanol
CAS No.: 3279-95-6
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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| CAS No. : | 3279-95-6 |
| Formula : | C2H7NO2 |
| M.W : | 77.08 |
| SMILES Code : | NOCCO |
| MDL No. : | MFCD00517034 |
| InChI Key : | WWWTWPXKLJTKPM-UHFFFAOYSA-N |
| Pubchem ID : | 3014186 |
| GHS Pictogram: |
|
| Signal Word: | Danger |
| Hazard Statements: | H225 |
| Precautionary Statements: | P210-P403+P235 |
| Class: | 3 |
| UN#: | 1993 |
| Packing Group: | Ⅲ |
| Num. heavy atoms | 5 |
| Num. arom. heavy atoms | 0 |
| Fraction Csp3 | 1.0 |
| Num. rotatable bonds | 2 |
| Num. H-bond acceptors | 3.0 |
| Num. H-bond donors | 2.0 |
| Molar Refractivity | 16.68 |
| TPSA ? Topological Polar Surface Area: Calculated from |
55.48 Ų |
| Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.57 |
| Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
-1.35 |
| Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
-1.13 |
| Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-1.22 |
| Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
-1.05 |
| Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
-0.84 |
| Log S (ESOL):? ESOL: Topological method implemented from |
0.66 |
| Solubility | 356.0 mg/ml ; 4.62 mol/l |
| Class? Solubility class: Log S scale |
Highly soluble |
| Log S (Ali)? Ali: Topological method implemented from |
0.68 |
| Solubility | 373.0 mg/ml ; 4.84 mol/l |
| Class? Solubility class: Log S scale |
Highly soluble |
| Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
0.63 |
| Solubility | 329.0 mg/ml ; 4.27 mol/l |
| Class? Solubility class: Log S scale |
Soluble |
| GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
| BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
| P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
| CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
| CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
| CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
| CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
| CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
| Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-7.73 cm/s |
| Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
| Ghose? Ghose filter: implemented from |
None |
| Veber? Veber (GSK) filter: implemented from |
0.0 |
| Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
| Muegge? Muegge (Bayer) filter: implemented from |
2.0 |
| Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
| PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
| Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
| Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
| Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.04 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 97% | In ethanol; for 18h;Reflux; | A mixture of 2-(aminooxy)ethanol (3.16 g, 41.0 mmol) and paraformaldehyde (1.23 g, 41.0 mmol) in EtOH (50 ml_) was heated under reflux for 18 h. The solvent was removed under reduced pressure to afford the subtitle compound formaldehyde 0-(2-hydroxyethyl) oxime as a colourless oil (3.56 g, 97%); 1 H NMR delta: 3.57 (2H, q), 4.05-3.96 (2H, m), 4.67 (1 H, t), 6.57 (1 H, d), 7.05 (1 H, d). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 78% | With hydrazine; In methanol; at 70℃; for 1.5h; | 13b. 2-(Aminooxy)ethan-l-olH2N. / LambdaDHA solution of the product of Example 13a (15.57 g, 75.2 mmol) and hydrazine hydrate (5.4 mL, 0.11 mol) in methanol (150 mL) were heated to 70 C for 1.5 hours. After cooling to room temperature, CHCl3 (100 mL) was added to the reaction mixture. The resulting slurry was filtered and washed with CHCl3 (100 mL x 2). The filtrate was concentrated and the residue was distilled under vacuum (0.025 mmHg) at 75 to 80 C to give a colorless oil (4.54 g, 78% yield); 1H NMR (300 MHz, CDCl3) delta 3.78 (s, 4H); 13C NMR (75 MHz, CDCl3) delta 76.3, 60.7. |
| 73% | With methylhydrazine; In dichloromethane; at 20℃; | 2 was obtained flask 5L in step 4 (2-hydroxy - ethoxy) - isoindole-1,3-dione (555 g, 2.679 mol) was added, dissolved under stirring in methylene chloride (2.0 L), while the reaction vessel was cooled in an ice bath, methyl hydrazine (142 mL, 2.68 mol) the inner temperature was added dropwise so as not to exceed 20 C. With the progress of the reaction, a white insoluble matter has emerged. After completion of the dropwise addition, the mixture was stirred under about 15 minutes the ice bath, the precipitated insoluble substance was filtered off through a glass filter, washed white insolubles on the filter with dichloromethane (2 x 400 mL), the filtrate and washings was combined evaporated under reduced pressure. The yellow oily residue (230g) was distilled under reduced pressure (51~54 C / 2 mmHg), the objective compound as unemployed transparent liquid 2-aminooxyethanol (162g, 73%). |
| 28% | With hydrazine hydrate; In methanol; at 70℃; for 1.5h; | To a stirred solution of Compound 172 (29.0 g, 139.97 mmol) in MeOH (300 mL) was added hydrazine hydrate (9.63 mL, 195.96 mmol) at room temperature. The resultant solution was stirred at 70 C for 1.5 hours. The reaction mixture was cooled to room temperature and diluted with CHCI3(1 x 300 mL). The resultant slurry was filtered through Buchner funnel and washed with CHCI3(2 x 300 mL). The filtrate was concentrated, and the residue was distilled under vacuum (0.025 mmHg) at 75-80 C to give the desired alcohol, 2-(aminooxy)ethan-1-ol (Compound 173, 3.0 g,28 %), as a colorless oil. |
| With hydrazine hydrate; In methanol; for 2h;Reflux; | Hydrazine monohydrate (3.96 mg, 0.124 mmol) was added to a solution of 2-(2- hydroxyethoxy)isoindoline-1 ,3-dione (produced with a similar procedure for intermediate B) (25.6 mg, 0.124 mmol) in 5 ml_ of MeOH. The solution was heated at reflux for 2 h and then cooled to rt. White precipitate was filtered off and 1 -(3-(quinolin-6-ylmethyl)- [1 ,2,4]triazolo[4,3-b]pyridazin-6-yl)ethanone (41.2) (15 mg, 0.049 mmol) was added. The pH value of the solution was adjusted to 5-6 with 1 N HCI solution. The reaction solution was then stirred at rt for 2 h. Solvent was evaporated and the crude was purified by HPLC (acidic with 0.05% TFA) to give 8 mg (44.5%) of the title compound as a white TFA salt. 1H-NMR (400MHz, MeOH-Cf4) delta ppm 9.09 (s, 1 H), 8.93 (d, 1 H), 8.27 (s, 1 H), 8.16 (m, 3H), 7.98 (d, 1 H), 7.93 (m, 1 H), 4.92 (s, 2H), 4.38 (t, 2H), 3.86 (t, 2H), 2.34 (s, 3H). LC-MS (method B): [MH]+ =363.1 , tR = 2.31 min. |

[ 3279-95-6 ]


[ 504435-90-9 ]
[ 32380-69-1 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| The title compound N-[5(S)-3-[3-fluoro-4-[(1alpha,5alpha,6alpha)-6-[(2-hydroxyethoxy) iminomethyl]-3-azabicyclo[3.1.0]hexan-3-yl]phenyl]-2-oxooxazolidin-5-ylmethyl]acetamide (149 mg) was prepared from N-[5(S)-3-[3-fluoro-4-[(1alpha,5alpha,6alpha)-6-formyl-3-azabicyclo[3.1.0]hexan-3-yl]phenyl]-2-oxooxazolidin-5-ylmethyl]acetamide (150 mg) and crude <strong>[3279-95-6]O-(2-hydroxyethyl)hydroxylamine</strong> (prepared from N-(2-hydroxyethoxy)phthalimide (414 mg)) in the same manner as described for EXAMPLE 66. MS (EI+) m/z: 420 (M+). |
[ 3279-95-6 ]


[ 3279-95-6 ]

[ 1008524-27-3 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With 4-methyl-morpholine; benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; In dichloromethane; N,N-dimethyl-formamide; for 48h; | EXAMPLE 802-(2-Fluoro-4-iodophenylamino)-5,5-dimethyl-8-oxo-5,6J,8-tetrahydro-4H-thieno[2,3- clazepme-S-carboxylic acid (2-hvdroxyethoxy)amide; Example 2 (1.0 g, 2.6 mmol), EDC (362 mg, 2.9 mmol), etaOBT (300 mg, 2.9 mmol), NMM (427 mg, 5.2 mmol) and 0-(2-hydroxyethyl)hydroxylamine (163 mg, 2.6 mmol) in DMF (10 mL) and DCM (9 mL) were stirred for 48 h. The reaction mixture was poured onto water and extracted with DCM, the unreacted acid removed by filtration and the remaining organic phase washed with IM aqueous HCl then dried over sodium sulphate and concentrated in vacuo. Chromatography (silica; ethyl acetate) yielded the title compound. deltaeta (DMSOd6) 11.22 (IH, br s), 8.82 (IH, br s), 7.93 (IH, t, J4.6 Hz), 7.64 (IH, dd, J 10.7, 2.1 Hz), 7.48 (IH, d, J 8.5 Hz), 7.08 (IH, t, J 8.5 Hz), 4.71 (IH, br s), 3.81-3.74 (2H, m), 3.59-3.50 (2H, m), 2.86 (2H, d, J5.0 Hz), 2.65 (2H, s), 0.97 (6H, s). LCMS (ES+) RT 2.85 minutes, 534 (M+H)+. |
[ 821790-50-5 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 55% | With 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride; In tetrahydrofuran; methanol; at 20℃; for 15h; | To a mixture of 4-(2-FLUORO-4-IODOANILINO)-1-METHYL-6-OXO-1, 6-dihydro-3- PYRIDINECARBOXYLIC acid (130 mg, 0.34 MMOL) and 2- (AMINOOXY) ETHANOL [prepared by the literature procedure: Dhanak, D.; Reese, C. B. , J. Chem. Soc. , Perkin Trans. 1,1987 ; 2829] (52 MG, 0.67 MMOL) in MEOH/THF (1: 1,20 mL) was added DMT-MM (187 mg, 0.67 MMOL) and the mixture stirred at R. T. for 15h. The reaction solvent was removed under reduced pressure and the oily residue partitioned between water (100 mL) and EtOAc (100 mL). The EtOAc fraction was then washed with water (2X100 mL) and brine (100 mL), dried (NA2SO4) and the solvent removed under reduced pressure. This afforded a cream solid which was purified by recrystallisation from EtOAc/MeOH to give 4-(2-FLUORO-4-IODOANILINO)-N-(2-HYDROXYETHOXY)-1- methyl-6-oxo-1, 6-dihydro-3-pyridinecarboxamide as a white, crystalline solid (83 mg, 55%), m. p. (EtOAc/MeOH) 148-151 C. H NMR [(CD3)2SO, 400 MHz] 8 11.65 (v br s, 1 H), 9.48 (br s, 1 H), 8.13 (s, 1 H), 7.74 (dd, J = 10.2, 1.8 Hz, 1 H), 7.58 (br d, J = 8.6 Hz, 1 H), 7.28 (t, J = 8. 5 HZ, 1 H), 5. 55 (s, 1 H), 4.76 (V BR S, 1 H), 3.90 (T, J = 4.9 Hz, 2 H), 3.61 (t, J = 4.9 Hz, 2 H), 3.36 (s, 3 H). Anal. Calcd for C15H1SFIN304 : C, 40.3 ; H, 3.4 ; N, 9.4. Found: C, 40.6 ; H, 3.6 ; N, 9.1. |
[ 3279-95-6 ]
[ 53-86-1 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 73% | With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine; In dichloromethane; at 20℃; for 2h; | 13c. 2-{ l-[(4-Chlorophenyl)carbonyl]-5-methoxy-2-methylindol-3-yl}-N-(2- hydroxyethoxy)acetamide EPO <DP n="86"/>A solution of indomethacin (6.23 g, 17.4 mmol), the product of Example 13b (1.35 g, 17.5 mmol), EDAC (4.32 g, 22.5 mmol) and NEt3 (5.6 mL, 40.2 mmol) in CH2Cl2 (100 mL) were stirred at room temperature for 2 hours. The reaction was partitioned between 3N HCl (100 mL) and CH2Cl2 (100 mL x 2). The combined organic extracts were washed with 3N HCl, water, brine, dried over Na2SO4, filtered, and concentrated. The resulting crude material was washed with methanol, filtered and dried under vacuum to give the title compound as a yellow solid (5.32 g, 73% yield); mp 146-148 C; 1H NMR (300 MHz, CDCl3) delta 8.69 (br s, IH), 7.62 (d, J = 8.5 Hz, 2H), 7.46 (d, / = 8.5 Hz, 2H), 6.90 (d, J = 2.4 Hz, IH), 6.84 (d, J = 9.0 Hz, IH), 6.69 (dd, J = 9.0 and 2.4 Hz, IH), 3.90-3.70 (m, 2H), 3.80 (s, 3H), 3.60-3.50 (m, 4H), 2.29 (s, 3H); 13C NMR (75 MHz, 20% CD3OD/CDCI3) delta 169.2, 168.4, 155.8, 139.2, 136.0, 133.4, 130.9, 130.6, 130.2, 128.9, 114.7, 111.8, 111.4, 101.0, 77.6, 59.0, 55.3, 28.6, 12.8; Mass Spectrum (API-TIS) m/z 417 (MH+). Anal, calcd for C2lH21ClN2O5: C, 60.51; H, 5.08; N, 6.72; Found: C, 60.50; H, 4.99; N, 6.69. |
[ 568599-40-6 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 55% | With 1,1'-carbonyldiimidazole; In tetrahydrofuran; at 20℃; for 15.1667h; | [0314] The product of Example 1, Step C, 3,4-difluoro-2-[(4-ethynyl-2-fluorophenyl)amino]benzoic acid (349 mg, 1.20 mmol) was dissolved in dry THF (15 mL), to which was added carbonyldiimidazole (CDI) (389 mg, 2.40 mmol). Within 10 minutes, a bright yellow solution was obtained and conversion to the imidazolide was confirmed by TLC (50% EtOAc/hexanes). A solution of 2-(aminooxy)ethanol (370 mg, 4.80 mmol) in THF (5 mL) was then added and the mixture stirred for 15 hours at room temperature. The reaction solvent was removed under reduced pressure and the residue partitioned between 1 M HCl (100 mL) and EtOAc (1100 mL). The EtOAc layer was then washed with water (1100 mL) and saturated NaCl solution (100 mL), dried (Na2SO4), and the solvent removed under reduced pressure to afford an oil which was purified by flash column chromatography on silica gel (50% EtOAc/hexanes) to give 2-[(4-ethynyl-2-fluorophenyl)amino]-3,4-difluoro-N-(2-hydroxyethoxy)benzamide as a pale yellow solid (232 mg, 55%); m.p. (EtOAc/hexanes) 158-161 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.80 (br s, 1H), 8.84 (br s, 1H), 7.43 (ddd, J=8.8, 5.9, 1.9 Hz, 1H), 7.34 (dd, J=12.2 1.9 Hz, 1H), 7.25 (ddd, J=9.9, 9.0, 7.3 Hz, 1H), 7.16 (ddd, J=8.3, 1.9, 0.9 Hz, 1H), 6.79 (ddd, J=9.1, 8.3, 4.9 Hz, 1H), 4.71 (br s, 1H), 4.10 (s, 1H), 3.84 (t, J=5.0 Hz, 2H), 3.56 (t, J=5.0 Hz, 2H). Anal. Calcd for C17H13F3N2O3: C, 58.5; H, 4.1; N, 8.0. Found: C, 58.3; H, 3.7; N, 8.0. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | With N-ethyl-N,N-diisopropylamine; In N-methyl-acetamide; | Method B: To a solution of 2-(2-chloro-4-iodo-phenylamino)-3,4-difluoro-benzoic acid pentafluorophenyl ester (10.0 g, 17.4 mmol) in anhydrous dimethylformamide (36 mL) was added 2-(aminooxy)-ethanol (1.6 g, 20.8 mmol) and N,N-diisopropylethylamine (6.0 mL, 34.8 mmol). The resultant solution was stirred at ambient temperature for 16 h. The reaction mixture was concentrated to 20% volume then diluted with ethyl acetate (360 mL). The resultant solution was washed with water (6*60 mL) and brine (2*60 mL). The organics were dried over anhydrous magnesium sulfate and concentrated under reduced pressure to afford a white solid that was purified on silica gel. Elution with ethyl acetate-methanol (9:1) afforded 2-(2-chloro-4-iodo-phenylamino)-3,4-difluoro-N-(2-hydroxy-ethoxy)-benzamide (7.31 g, 90%) as a white solid. Recrystallization from methanol afforded analytically pure material, identical in all respects to the material prepared by method A. |
| 90% | With N-ethyl-N,N-diisopropylamine; In DMF (N,N-dimethyl-formamide); at 20℃; for 16h; | [0277] To a solution of the product of Example 2, Step B, 2-(2-chloro-4-iodo-phenylamino)-3,4-difluorobenzoic acid pentafluorophenyl ester (10.0 g, 17.4 mmol), in anhydrous dimethylformamide (36 mL) was added 2-(aminooxy)-ethanol [prepared by the literature procedure: Dhanak, D.; Reese, C. B., J. Chem. Soc., Perkin Trans. 1987;1:2829] (1.6 g, 20.8 mmol) and N,N-diisopropylethylamine (6.0 mL, 34.8 mmol). The resultant solution was stirred at ambient temperature for 16 hours. The reaction mixture was concentrated to 20% volume then diluted with ethyl acetate (360 mL). The resultant solution was washed with water (6×60 mL) and brine (2×60 mL). The organics were dried over anhydrous magnesium sulfate and concentrated under reduced pressure to afford a white solid that was purified on silica gel. Elution with ethyl acetate-methanol (9:1) afforded 2-(2-chloro-4-iodo-phenylamino)-3,4-difluoro-N-(2-hydroxy-ethoxy)-benzamide (7.31 g, 90%) as a white solid. Recrystallization from methanol afforded analytically pure material: m.p. 173-175 C.; 1H NMR (400 MHz, DMSO-d6) delta 11.93 (br s, 1H), 8.85 (br s, 1H), 7.76 (d, J=1.7 Hz, 1H), 7.48 (dd, J=8.6, 1.7 Hz, 1H), 7.44 (dd, J=8.5, 6.2 Hz, 1H), 7.25 (dt, J=8.5, 9.3 Hz, 1H), 6.58 (dd, J=8.5, 6.4 Hz, 1H), 4.70 (br s, 1H), 3.86 (br s, 2H), 3.56 (br d, J=3.9 Hz, 2H); MS (APCI+)=469.0; MS (APCI-)=467.0; [0278] Anal. Calcd/found for C15H12ClF2IN2O3: C, 38.45/38.60; H, 2.58/2.53; N, 5.98/5.91; F, 8.11/8.08; I, 27.08/27.43. |
| 90% | With N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 20℃; for 16h; | Step C Preparation of 2-(2-chloro-4-iodo-phenylamino)-3,4-difluoro-N-(2-hydroxy-ethoxy)-benzamide To a solution of the product of Example 6, Step B, 2-(2-chloro-4-iodophenylamino)-3,4-difluorobenzoic acid pentafluorophenyl ester (10.0 g, 17.4 mmol), in anhydrous dimethylformamide (36 mL) was added 2-(aminooxy)-ethanol [prepared by the literature procedure: Dhanak, D.; Reese, C. B. J. Chem. Soc., Perkin Trans. 1 1987, 2829] (1.6 g, 20.8 mmol) and N,N-diisopropylethylamine (6.0 mL, 34.8 mmol). The resultant solution was stirred at ambient temperature for 16 h. The reaction mixture was concentrated to 20% volume then diluted with ethyl acetate (360 mL). The resultant solution was washed with water (6*60 mL) and brine (2*60 mL). The organics were dried over anhydrous magnesium sulfate and concentrated under reduced pressure to afford a white solid that was purified on silica gel. Elution with ethyl acetate-methanol (9:1) afforded 2-(2-chloro-4-iodo-phenylamino)-3,4-difluoro-N-(2-hydroxy-ethoxy)-benzamide (7.31 g, 90%) as a white solid. Recrystallization from methanol afforded analytically pure material: m.p. 173-175 C.; 1H NMR (400 MHz, DMSO-d6) delta 11.93 (br s, 1H), 8.85 (br s, 1H), 7.76 (d, J=1.7 Hz, 1H), 7.48 (dd, J=8.6, 1.7 Hz, 1H), 7.44 (dd, J=8.5, 6.2 Hz, 1H), 7.25 (dt, J=8.5, 9.3 Hz, 1H), 6.58 (dd, J=8.5, 6.4 Hz, 1H), 4.70 (br s, 1H), 3.86 (br s, 2H), 3.56 (br d, J=3.9 Hz, 2H); MS (APCI+)=469.0; MS (APCI-)=467.0; Anal. Calcd/found for C15H12ClF21N2O3: C, 38.45/38.60; H, 2.58/2.53; N, 5.98/5.91; F, 8.11/8.08; I, 27.08/27.43. aa0-5aa |

[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 88% | With 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methymorpholinium chloride; In methanol; at 20℃; for 15h; | [0311] 2-(4-Allyl-2-fluoroanilino)-3,4-difluorobenzoic acid (700 mg, 2.28 mmol) was dissolved in MeOH (20 mL) to which was added 2-(aminooxy)ethanol (263 mg, 3.42 mmol), followed by 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methymorpholinium chloride [DMT-MM, prepared according to the procedure of Kunishima et al [Tetrahedron, 55, 13159-13170 (1999)]] (946 mg, 3.42 mmol). This mixture was stirred 15 h. at room temperature. The MeOH was removed under reduced pressure and the resulting oil dissolved in EtOAc (100 mL), which was washed with water (2×100 mL), brine (100 mL) and dried (Na2SO4). The solvent was removed under reduced pressure to afford a crude yellow oil which was purified by filtration through a plug of silica gel (50% EtOAc/PE as eluant) to give 2-(4-allyl-2-fluoroanilino)-3,4-difluoro-N-(2-hydroxyethoxy)benzamide as a white solid (734 mg, 88%); m.p. (EtOAc/hexane) 173-177 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.85 (br s, 1H), 8.75 (br s, 1H), 7.43-7.37 (m, 1 H), 7.14-7.07 (m, 1H), 7.05-6.99 (m, 1H), 6.90-6.81 (m, 2H), 5.99-5.87 (m, 1H), 5.02-5.1 1 (m, 2H), 4.70 (br s, 1H), 3.85 (t, J=4.9 Hz, 1H), 3.57 (t, J=4.9 Hz, 1H), 3.51-3.40 (m, 2H, obscured by H2O). Anal. calcd. for C18H17F3N2O3: C, 59.0; H, 4.7; N, 7.7. Found C, 59.1; H, 4.5; N, 7.4. |
[ 568597-59-1 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 48% | With 1,1'-carbonyldiimidazole; In tetrahydrofuran; at 20℃; | This material was then coupled directly with 2-(aminooxy)ethanol as follows: The crude 3,4-difluoro-2-[[4-(methoxycarbonyl)-phenyl]amino]benzoic acid was dissolved in dry THF (20 mL) to which was added CDI (1.63 g, 10.0 mmol). This reaction mixture was stirred at room temperature for 2 hours, then a solution of 2-(aminooxy)ethanol (1.55 g, 20.1 mmol) in dry THF (10 mL) was added and the reaction allowed to stir at room temperature overnight. The reaction solvent was removed under reduced pressure and the resulting oil dissolved in EtOAc (200 mL) which was washed sequentially with 1 M HCl (100 mL), water (100 mL), and brine (100 mL). The solution was dried (Na2SO4), the solvent removed under reduced pressure and the crude oil purified by chromatography on flash silica (10% EtOAc as eluant) to give methyl 4-[[2,3-difluoro-6-[[(2-hydroxyethoxy)amino]carbonyl]phenyl]amino]benzoate (0.889 g, 48%) as a white solid; mp (EtOAc/hexanes) 158-160 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.64 (br s, 1H), 8.76 (br s, 1H), 7.78 (d, J=8.8 Hz, 2H), 7.41-7.27 (m, 2H), 6.80 (dd, J=8.8, 1.8 Hz, 2H), 4.67 (br s, 1H), 3.78 (s, 3H), 3.76 (t, J=4.8 Hz, 2H), 3.50 (t, J=4.6 Hz, 2H). Anal Calcd for C17H16F2N2O5: C, 55.7; H, 4.4; N, 7.7. Found C, 55.7; H, 4.4; N, 7.6. aa0-5aa |
[ 568597-62-6 ]
[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 79% | With 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride; In methanol; at 20℃; for 15h; | Step B Preparation of methyl 4-(2,3-difluoro-6-[(2-hydroxyethoxy)amino]carbonyl}anilino)-3-fluorobenzoate 3,4-difluoro-2-[2-fluoro-4-(methoxycarbonyl)anilino]benzoic acid (320 mg, 0.99 mmol) was dissolved in MeOH (50 mL) to which was added 2-(aminooxy)ethanol followed by 4-(4,6-dimethoxy-1,3,5-triazin-2-yl)-4-methymorpholinium chloride [DMT-MM, prepared according to the procedure of Kunishima et al [Tetrahedron, 55, 13159-13170 (1999)]] (326 mg, 1.18 mmol), This mixture was stirred 15 h. at room temperature. The MeOH was removed under reduced pressure and the resulting oil dissolved in EtOAc (100 mL), which was washed with water (2*100 mL), brine (100 mL) and dried (Na2SO4). The solvent was removed under reduced pressure to afford a crude yellow oil which was purified by filtration through a plug of silica gel (100% EtOAc as eluant) to give methyl 4-(2,3-difluoro-6-[(2-hydroxyethoxy)amino]carbonyl} anilino)-3-fluorobenzoate as a cream solid (79%); m.p. (EtOAc/hexane) 162-165 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.82 (v br s, 1H), 9.08 (v br s, 1H), 7.70-7.62 (m, 2H), 7.49-7.43 (m, 1H), 7.38-7.29 (m, 1H), 6.81 (ddd, J=8.6, 8.6, 4.7 Hz, 1H), 4.76 (v br s, 1H), 3.83-3.78 (m, 5H), 3.53 (t, J=4.8 Hz, 2H). Anal. calcd. for C17H15F3N2O5: C, 53.1; H, 3.9; N, 7.3. Found C, 53.3; H, 4.2; N, 7.3. aa0-5aa |

[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 39% | 2- (Aminooxy) ethanol (0.05 g, 0.6 MMOL) in MeOH (1 ml) was added to 4- (2, 4- DIFLUOROANIFINO)-1-METHYL-6-OXO-1, 6-DIHYDRO-3-PYRIDINECARBOXYLIC acid (0.15 g, 0.5 MMOL) in MeOH (20 ml). THF was added dropwise until the reagents dissolved. The solution was stirred at RT for 30 min, after which DMT-MM (0.18 g, 0.6 MMOL) was added. After stirring at RT for 60 h, the reaction had not gone to completion. Further 2- (AMINOOXY) ETHANOL (0.05 g, 0.6 MMOL) and DMT-MM (0.18 g, 0.6 MMOL) were added and the reaction mixture stirred for a further 2 h at RT. The solvent was then removed under reduced pressure and the residue dissolved in EtOAc. After washing with water x2, sat. NaHCO3 and brine, the organic layer was dried (NA2SO4), concentrated and further purified by flash chromatography on silica gel (EtOAc followed by 10% MEOH/CH2CI2) to give 4-(2, 4-DIFLUOROANILINO)-N-(2-HYDROXYETHOXY)-1-METHYL-6- oxo-1,6-dihydro-3-pyridinecarboxamide (0.07 g, 39%) as a white solid ; m. p. (EtOAc/Hexane) 232-238 C. N NMR [400 MHz, (CD3) 2SO] 8 11. 62 (br s, 1 H), 9.21 (br s, 1 H), 8.11 (s, 1 H), 7.51-7. 38 (m, 2 H), 7. 17-7. 11 (m, 1 H), 5.30 (s, 1 H), 4.76 (br s, 1 H), 3.92 (t, J = 4.8 Hz, 2 H), 3.62 (t, J = 4.8 Hz, 2 H), 3.34 (s, 3 H). LCMS (ACPI+) 340 (100%). Anal. Calcd for CI5HISF2N304. 0.25 H20 : C, 52.4 ; H, 4.5 ; N, 12.2. Found C, 52.6 ; H, 4.5 ; N, 12.1. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 34.09% | In DMF (N,N-dimethyl-formamide); at 20℃; for 2h; | Step K: Preparation of 5-FLUORO-6- .-3-METHYL-3H- BENZOIMIDAZOLE-5-CARBOXVLIC acid (2--OH-ethoxy)-amide To a clear yellow solution of 2,3, 4,5, 6-PENTAFLUOROPHENYL-4-FLUORO-5 [(2-FLUORO-4- IODOPHENYL)-AMINO]-1-METHYLBENZIMIDAZOLE-6-CARBOXYLATE (55.0 g, 0.092 mol) in DMF (360 ML) was added 2-(AMINOOXY) ETHAN-1-OL (25.31 g, 0.354 mol) drop wise. The reaction mixture was stirred at room temperature for 2 h (TLC-EtOAc: HEX/ 1 : 1), evaporated under vacuum to half the volume and was added 1 KG of crushed ice. The thick sticky product was extracted with ethyl acetate (250 ml X 3) and the organic extracts were washed with brine (250 ml X1), dried over NA2SO4, filtered and evaporated under vacuum. The crude product (40g) was purified by silica gel column chromatography eluting with EtOAc: Hex (30: 50) to give the pure title compound (15g) and a mixture of desired and undesired compounds (13g). Yield: 15g (34.09 %), mp. 203-205 C |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With pyridinium p-toluenesulfonate; In ethanol; for 3h;Heating / reflux; | Synthesis Example 10 (Preparation of an intermediate); After refluxing 5- (3, 3-dichloro-allyloxy)-3, 4-dihydro-2H-naphthalen-1-one (2.7g), 2-aminooxy- ethanol (1.4g) and pyridinium p-toluenesulfonate (0. 1g) in ethanol (50ml) for 3 hours, the solvent was distilled off under reduced pressure and the residue was purified by silica gel column chromatography (eluent: hexane: ethyl acetate = 7: 3) to obtain 5- (3, 3-dichloro-allyloxy) -3,4- dihydro-2H-naphthalen-1-one 0-(2-hydroxyethyl)-oxime (2. 5g). NMR :'H-NMR (CDC) 7. 56 (lH, d, J=8. 1Hz), 7.14 (lH, t, J=8. 1Hz), 6.78 (lH, d, J=8. 1Hz), 6.17 (lH, t, J=6. 1Hz), 4.66 (2H, d, J=6. 1Hz), 4. 38-4. 26 (3H, m), 4.01-3. 89 (3H, m), 2.81-2. 68 (5H, m), 1.91- 1.76 (3H, m). |

[ 3279-95-6 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With NaOCH3; In Diethyl carbonate; | Step F Preparation of (S)(RS)-5-hydroxymethyl-4-methyl-3-(1-methylethyl)oxazolidin-2-one To 14.2 g of crude glycolamine from Step E in 67 ml of diethylcarbonate at 60 C. was added 7.09 g of NaOCH3 over 10 minutes under Argon. The mixture was heated to 130 C. and the ethanol was removed by distillation. After 1.5 hours the mixture was cooled to 22 C., diluted with H2 O and extracted with CH2 Cl2 (3*100 ml). The organic portions were washed with brine, dried (Na2 SO4) and concentrated to an oil to yield 14.0 grams of crude product. STR22 |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| In tetrahydrofuran; at 20 - 25℃; for 12h;Product distribution / selectivity; | The oxime compound, (E)-3,4-difluoro-2-(2-fluoro-4-iodo-phenylamino)-N-(2-hydroxy-ethoxy)-5-[(2-hydroxy-ethoxyi mino)-methyl]-benzamide obtained in Step B of Example 6 may be easily prepared from 3,4-difluoro-2-(2-fluoro-4-iodo-phenylamino)-5-formyl-N-(2-hydroxy-ethoxy)-benzamide obtained in Step F of Example 1 by a reaction with 2-aminooxyethanol in THF at room temperature. Namely, 3,4-difluoro-2-(2-fluoro-4-iodo-phenylamino)-5-formyl-N-(2-hydroxy-ethoxy)-benzamide (1.37 g) and aminooxy ethanol (262 mg) were mixed in THF at room temperature for 12 hours, and then the solvent was evaporated to give 3,4-difluoro-2-(2-fluoro-4-iodo-phenylamino)-N-(2-hydroxy-ethoxy)-5-[(2-hydroxy-ethoxyimino)-methyl]-benzamide. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 82% | In tetrahydrofuran; methanol; at 20℃; for 4h; | (9aS)-8-Acetyl- 1 ,7-dihydroxy-3-methoxy-9a-methyl-N-[(2-methyl-1-naphthyl)methyl]-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-carboxamide produced in Example 27 (218 mg, 0.44 mmol) was dissolved in tetrahydrofuran:methanol (2:1, 5 mL). O-(2-Hydroxyethyl)-hydroxylamine (50 mg, 0.65 mmol) was added at room temperature, and the mixture was stirred for four hours. The reaction solution was treated in the same manner as in Example 87 to give the title target compound (200 mg, 82%) as a yellow solid. 1H-NMR (CDCl3, 400MHz):delta ppm: 1.71 (3H, s), 2.55 (3H, s), 2.63 (3H, s), 3.60 (3H, s), 3.96 (2H, m), 4.23 (2H, m), 5.01-5.13 (2H, m), 5.88 (1H, s), 6.16 (1H, s), 7.03 (1H, m), 7.34 (1H, d, J=8.0Hz), 7.44 (1H, m), 7.53 (1H, m), 7.73 (1H, d, J=8.7Hz), 7.82 (1H, d, J=7.9Hz), 8.11 (1H, d, J=8.3Hz), 11.16 (1H, s), 15.63 (1H, s). MS (ESI) m/z: 559 (M+H)+ |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 65% | [0265] The title compound was prepared from the reaction of the product of Step D, 2-[(4-ethyl-2-fluorophenyl)amino]-3,4-difluorobenzoic acid (93 mg, 0.32 mmol) dissolved in dry THF (5 mL), and carbonyldiimidazole (CDI) (102 mg, 0.63 mmol). Within 10 minutes, a bright yellow solution was obtained and conversion to the imidazolide was confirmed by TLC (50% EtOAc/hexanes). A solution of 2-(aminooxy)ethanol (97 mg, 1.26 mmol) in THF (5 mL) was then added and the mixture stirred for 15 hours at room temperature. The reaction solvent was removed under reduced pressure and the residue partitioned between 1 M HCl (50 mL) and EtOAc (50 mL). The EtOAc layer was then washed with water (50 mL) and saturated NaCl solution (50 mL), dried (Na2SO4), and the solvent removed under reduced pressure to afford an oil which was purified by flash column chromatography on silica gel (50% EtOAc/hexanes) to give 2-[(4-ethyl-2-fluorophenyl)amino]-3,4-difluoro-N-(2-hydroxyethoxy)benzamide as a cream solid (65%); m.p. (EtOAc/hexanes) 134-138 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.84 (br s, 1H), 8.76 (br s, 1H), 7.43-7.37 (m, 1H), 7.14-7.02 (m, 2H), 6.90 (dd, J=8.3, 1.5 Hz, 1H), 6.83 (td, J=8.6, 4.4 Hz, 1H), 4.70 (br s, 1H), 3.86 (t, J=4.9 Hz, 2H), 3.57 (t, J=4.9 Hz, 2H), 2.54 (q, J=7.6 Hz, 2H), 1.15 (t, J=7.6 Hz, 3H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 71% | [0202] The title compound was prepared from reaction of the product of Example 5, Step B, 3,4-difluoro-2-[[2-fluoro-4-(3-methoxy-1-propynyl)phenyl]-amino]benzoic acid. This product (200 mg, 0.60 mmol) was dissolved in dry THF (5 mL) and CDI (193 mg, 1.19 mmol) added. After 0.5 hours at room temperature, TLC showed complete conversion to the desired imidazolide. A solution of 2-(aminooxy)ethanol (184 mg, 2.39 mmol) in dry THF (2 mL) was added and the reaction mixture stirred overnight at room temperature. The reaction solvent was then removed under reduced pressure and the resulting residue partitioned between EtOAc (50 mL) and saturated NaHCO3 solution (50 mL). The EtOAc layer was then dried (Na2SO4), the solvent removed under reduced pressure, and the resulting oil purified by column chromatography on silica gel (50% EtOAc/hexanes) to give 3,4-difluoro-2-[[2-fluoro-4-(3-methoxy-1-propynyl)phenyl]amino]-N-(2-hydroxyethoxy)benzamide as a white solid (165 mg, 71%); mp (EtOAc/Et2O) 121-123 C. 1H NMR [400 MHz, (CD3)2SO] delta 11.84 (br s, 1H), 8.85 (br s, 1H), 7.46-7.38 (m, 1H), 7.32 (dd, J=12.1, 1.7 Hz, 1H), 7.29-7.21 (m, 1H), 7.14 (dd, J=8.4, 1.6 Hz, 1H), 6.79 (td, J=8.8, 4.7 Hz, 1H), 4.74 (br s, 1H), 4.30 (s, 2H), 3.84 (t, J=4.8 Hz, 2H), 3.56 (t, J=4.9 Hz, 2H), 3.32 (s, 3H). Anal. Calcd for C19H17F3N2O4: C, 57.9; H, 4.4; N, 7.1. Found C, 57.9; H, 4.3; N, 7.0. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 30% | Example 3 3,5-dichloro-2-amino-N-(2-hydroxyethoxy)benzamide 9 g (40.9 mmol) of methyl 3,5-dichloro-2-aminobenzoate and 6.3 g (81.8 mmol) of 2-(aminooxy)ethanol are initially charged in 90 ml of methanol, and 22.1 g (122.7 mmol) of sodium methoxide as a 30% strength solution in methanol are added dropwise at 20 C. The mixture is stirred at 50 C. overnight. The mixture is cooled and poured onto 400 ml of water, and the pH is adjusted to 3 using 1 N hydrochloric acid. The mixture is extracted 3 times with in each case 150 ml of ethyl acetate and the extracts are dried with sodium sulphate and concentrated using a rotary evaporator. Purification by silica gel chromatography cyclohexane/ethyl acetate=3:1, then cyclohexane/ethyl acetate=1:1. Yield: 4 g (30% of theory) |

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