Structure of 446-18-4
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 446-18-4 |
Formula : | C7H7FN2O2 |
M.W : | 170.14 |
SMILES Code : | NC1=CC([N+]([O-])=O)=C(F)C=C1C |
MDL No. : | MFCD18824947 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P280-P305+P351+P338-P310 |
Num. heavy atoms | 12 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.14 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 44.59 |
TPSA ? Topological Polar Surface Area: Calculated from |
71.84 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.2 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.53 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.05 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.05 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
-0.16 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.13 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.16 |
Solubility | 1.17 mg/ml ; 0.00687 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.65 |
Solubility | 0.383 mg/ml ; 0.00225 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.08 |
Solubility | 1.42 mg/ml ; 0.00832 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.25 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
3.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.91 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | With sulfuric acid; nitric acid; at -5 - 0℃; for 2h; | Preparation of 1-fluoro-4-isothiocyanato-5-methyl-2-nitro-benzene IV-a Fuming nitric acid (3.35 mL, 84 mmol) in concentrated sulfuric acid (10 mL) was added dropwise to a -5C cooled solution of 4-fluoro-2-methyl-phenylamine (10.5 g, 84 mmol) in 90 mL of concentrated sulfuric acid. The reaction mixture was stirred at 0C for 2h and cold water added (300 mL). Then, a cold solution of NaOH (10 N) was slowly added until pH=10 and the resultant precipitate was filtered off to give intermediate IV-e as yellow solid (12.7 g, 89%). H NMR (400 MHz, DMSO-d6) delta 7.30 (d, J = 6.8 Hz, 1 H), 7.17 (d, J = 12.3 Hz, 1 H), 5.39 (s, 2H), 2.14 (s, 3H). |
81.9% | With sulfuric acid; potassium nitrate; In sulfuric acid; at 0 - 20℃; for 1h; | Step-1: Preparation of 4-fluoro-2-methyl-5-nitroaniline A solution of 4-fluoro-2-methylaniline (12g, 96mmol) in Con.H2S04 (110ml) was cooled to 0C and added KNO3 (10.6g, 105.6mmol) and stirred at room temperature for lh. The reaction mass was diluted by water and basified with 20% NaOH. The compound was extracted with ethyl acetate, dried over Na2S04 and concentrated to obtain the title compound (15g, 81.9 %.) 1HNMR (CDCI3, 300MHz): delta 7.61 (d, 1H), 7.34 (d, 1H), 2.24 (s, 3H). |
74% | With nitric acid; In sulfuric acid; at -10℃; for 0.166667h; | Concentrated nitric acid (17 g, 0.18 mol) was added dropwise to a stirred solution of 4-fluoro-2-methylanilme (20 g, 0.16 mol) in cone H2SO4 (300 mL) at -10 0C. The mixture was stirred at -10 0C for 10 min., and the reaction mixture was poured into ice water. The <n="93"/>resultant solid was collected by Filtration and partitioned between EtOAc and aq Na2COs solution (pH 8). The organic solution was washed with brine, dried (MgSO4) and concentrated to give 4-fluoro-2-methyl-5-nitroaniline (20 g, 74 % yield). 1H NMR (400 MHz, DMSO-J5): delta 121 (d, J= 6.8 Hz, 1 H), 7.14 (d, J= 12.4 Hz, 1 H), 5.37 (s, 2 H), 2.10 (s, 3 H). |
50% | With nitric acid; In sulfuric acid; | Step 1 2-amino-5-fluoro-4-nitrotoluene 1.3 g (10 mmol) of 4-fluoro-2-methylaniline were introduced into 10 ml of concentrated sulfuric acid and cooled to -10 C. A cold solution of 0.4 ml (10 mmol) of fuming nitric acid in 2 ml of concentrated sulfuric acid was added slowly dropwise. The resulting mixture was stirred for 3 hours at 0 C. and subsequently poured into ice. The precipitated product was filtered with suction and washed. 0.85 g (50% of the theoretical yield) of product was obtained. The yellow crystalline product had a melting point of 178 C. 1 H-NMR(D6 -DMSO): delta=2.24 (s; 3H, --CH3) 5.78 (br. s; 2H, --NH2 exchange with D2 O) 7.28 (d, J=12 Hz; 1H, 6-H) 7.57 (d, J=6.8 Hz; 1H, 3-H) MS (70ev): m/e=170(M+.) |
With sulfuric acid; guanidine nitrate; at 0 - 20℃; for 0.5h; | [445] 4-fluoro-2-methylaniline (1 g, 8 mmol) was added to concentrated sulfuric acid (15 mL) at 00 C, followed by the addition of guanidine nitrate (1 g, 8 mmol). The mixture was then warmed to rt and stirred for 30 mm. Subsequently, the mixture was poured onto ice and neutralized with aqueous sodium hydroxide (4N) until the pH was 9. The mixture was then diluted with EtOAc and water, the organic phase was isolated, and the aqueous phase was extracted with additional EtOAc (2x). The combined organic layers were washed with water, dried over sodium sulfate, filtered and concentrated in vacuo to give 4- fluoro-2-methyl-5-nitroaniline (Al) as an orange solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
37% | With N-ethyl-N,N-diisopropylamine; sodium iodide; In acetonitrile; at 60℃; | To a solution of 5-(chloromethyl)-N-methyl-2-(methylthio)pyrimidin-4-amine (11.5 g) and Example Dl (9.6 g, 56 mmol) in anhydrous CH3CN (160 mL) was added NaI (1.7 g, 11 mmol) and diisopropylethylamine (14.6 g, 112 mmol), then the mixture was stirred at 60 0C overnight. After removing the solvent, the residue was purified by column chromatography to give 5-((4-fluoro-2-methyl-5-nitrophenylamino)methyl)-N-methyl -2-(methylthio)pyrimidin-4- amine (7 g, 37 % yield). .H NMR (400 MHz, DMSO-J6): USD 7.83 (s, 1 H), 7.22 (d, J = 12 Hz, 1 H), 7.08 (m, 1 H), 6.98 (d, J = 8 Hz, 1 H), 5.79 (s, 1 H), 4.09 (d, J= 8 Hz, 2 H), 2.85 (d, J = 4 Hz, 3 H), 2.37 (s, 3 H), 2.17 (s, 3 H); MS (ESI) m/z: 337.9 [M + H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71.6% | In pyridine; at 50℃; for 8h; | A mixture of 5-(chloromethyl)-N4-isopropyl-N2-methoxy-N2-methylpyridine-2,4- diamine (2.7 g, 11.1 mmol) and Example Dl (1.9 g, 11.1 mol) in pyridine (60 mL) was stirred at 50 0C for 8 h. The pyridine was removed under reduced pressure and the residue was purified by slica gel chromatography to give 5-((4-fluoro-2-methyl-5-nitrophenylamino)methyl)-N4- isopropyl-N2-methoxy-N2-niethylpyridine-254-diamine (3.0 g, 71.6% yield). 1H NMR (400 MHz, DMSO-ffc): delta 7.84 (s, 1 H), 7.32 (d, J= 12.4 Hz, 1 H), 7.16 (d, J= 6.4 Hz, 1 H), 6.22 (s, 1 H), 6.00 (t, J= 5.2 Hz, 2 H), 4.28 (d, J- 5.2 Hz, 2 H), 3.82 (m, 1 H), 3.72 (s, 3 H), 3.17 (s, 3 H), 2.27 (s, 3 H), 1.27 (d, J= 6.4 Hz, 6 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With sodium tris(acetoxy)borohydride; In acetic acid; at 20℃; | To a solution of 6-chloro-4-(metlrylamino)nicotinaldehyde (1.00 g, 5.88 mmol) and Example Dl (1.00 g, 5.88 mmol) in glacial acetic acid (7.5 mL) was added sodium triacetoxy borohydride (2.49 g, 11.7 mmol). The mixture was stirred overnight at RT. Another portion of sodium triacetoxy borohydride (1.30 g, 6.11 mmol) was added and the mixture was stirred another 24 h. The reaction was diluted with ice water and basified (pH ~ 7-8) with NaOH. The yellow precipitate was collected by filtration, washed with H2O and dried under vacuum to give <n="78"/>crude 2-chloro-5-((4-fluoro-2-methyl-5"nitrophenylamino)methyl)-N-methylpyridin-4-amine (2.04 g, 107 % yield), which was used without further purification. MS (ESI) m/z: 325.0 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With calcium carbonate; In 1,4-dioxane; (2S)-N-methyl-1-phenylpropan-2-amine hydrate; | Step 2 2-chloroethyl-N-[(4-fluoro-2-methyl-5-nitro)phenyl]-carbamate 5 g (29 mmol) of <strong>[446-18-4]2-amino-5-fluoro-4-nitrotoluene</strong> was heated with 2.5 g calcium carbonate in 200 ml dioxan at 70 C., reacted with 3.1 ml of chloroformic acid chloroethyl ester and heated for 3 hours at 100 C. The resultant solution was filtered hot and the filtrate is introduced into 500 ml of ice water. The ocher colored precipitate was filtered with suction and recrystallized from an ethanol-water mixture. The resulting 6.6 g (81% of theoretical) of 2-chloroethyl-N-[(4-fluoro-2-methyl-5-nitro)phenyl]-carbamate had a melting point of 113 C. 1 H-NMR(D6 -DMSO): delta=2.33 (s; 3H, --CH3) 3.88 (t; 2H, --CH2 Cl) 4.38 (t; 2H, --CH2 CH2 Cl) 7.49 (d, J=12.3 Hz; 1H, 6-H) 8.22 (d, J=7.3 Hz; 1H, 3-H) 9.44 (br.s; 2H, --NH, exchange with D2 O) MS(70ev): m/e=276(M+.) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
99% | In dichloromethane; for 4h; | To a solution of IV-e (600 mg, 3.53 mmol) in DCM (40 ml_) was added 1 ,1 '-Thiocarbonyldi- 2(1 H)-pyridone (232 mg, 3.88 mmol) and the reaction mixture was stirred for 4h. After evaporation of solvent the resulting crude product was purified by silica gel chromatography using 25% AcOEt in cyclohexane as eluent to give 1 -fluoro-4- isothiocyanato-5-methyl-2-nitro-benzene IV-a as a yellow syrup (740 mg, 99%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | Preparation of 1 -acetyl-3-(4-fluoro-2-methyl-5-nitro-phenyl)-thiourea V-a To a solution of ammonium thiocyanate (805 mg, 10.6 mmol) in acetone (15 mL) was added dropwise AcCI (0.76 mL, 10.6 mmol). The reaction mixture was heated at 60 ' for 1 h. After cooling a solution of compound IV-e (1 .5 g, 8.82 mmol) in acetone (5 mL) was added and the reaction mixture stirred for 2h at room temperature. Water (60 mL) was added and the mixture was stirred for 1 h. The precipitate filtered, washed with water and dried under vacuum to give the title compound V-a (2.05 g, 86%). H NMR (400 MHz, DMSO-d6) delta 12.20 (s, 1 H), 1 1 .67 (s, 1 H), 8.48 (d, J = 7.4 Hz, 1 H), 7.59 (d, J = 12.2 Hz, 1 H), 2.31 (s, 3H), 2.18 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72.3% | With potassium carbonate; In tetrahydrofuran; at 70℃; for 12h; | Step-2: Preparation of (S)-1-(4-amino-5-methyl-2-nitrophenyl)pyrrolidin-3-ol. A solution of <strong>[446-18-4]4-fluoro-2-methyl-5-nitroaniline</strong> (1 1g, 64.32mmol), potassium carbonate (35.5g, 257.30 mmol) and (S)-pyrrolidin-3-ol (8.7g, 70.76mmol) in THF was stirred at 70C for 12h. The reaction mixture was filtered and filtrate was purified by column chromatography elution with 50% ethyl acetate in hexane to obtain the title compound (11g, 72.3 %.). LCMS: 97.15% m/z = 238.3(M+1). |
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