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CAS No. : | 455957-76-3 | MDL No. : | MFCD18398721 |
Formula : | C9H8BrClO2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | LJOPBOWSUDRXSV-UHFFFAOYSA-N |
M.W : | 263.52 | Pubchem ID : | 22640779 |
Synonyms : |
|
Num. heavy atoms : | 13 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.22 |
Num. rotatable bonds : | 3 |
Num. H-bond acceptors : | 2.0 |
Num. H-bond donors : | 0.0 |
Molar Refractivity : | 55.02 |
TPSA : | 26.3 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -5.76 cm/s |
Log Po/w (iLOGP) : | 2.66 |
Log Po/w (XLOGP3) : | 3.03 |
Log Po/w (WLOGP) : | 2.82 |
Log Po/w (MLOGP) : | 3.25 |
Log Po/w (SILICOS-IT) : | 3.36 |
Consensus Log Po/w : | 3.02 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.53 |
Solubility : | 0.0784 mg/ml ; 0.000298 mol/l |
Class : | Soluble |
Log S (Ali) : | -3.25 |
Solubility : | 0.149 mg/ml ; 0.000565 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -4.35 |
Solubility : | 0.0118 mg/ml ; 0.0000448 mol/l |
Class : | Moderately soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 0.0 |
Synthetic accessibility : | 1.71 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P264-P270-P301+P312-P330 | UN#: | N/A |
Hazard Statements: | H302 | Packing Group: | N/A |
GHS Pictogram: |
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* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate In DMF (N,N-dimethyl-formamide) at 100℃; for 18h; | 1.C Step C: Preparation of Tert-Butyl 4-[4-Chloro-2-(2-Methoxy-2-Oxoethyl)Phenyl]-3,6-Dihydropyridine-1(2H)-Carboxylate (1-5) A vigorously stirred mixture of the tert-butyl 4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,6-dihydropyridine-1(2H)-carboxylate (1-4) (1.40 g, 4.53 mmol), methyl(2-bromo-5-chlorophenyl)acetate (1-2) (1.31 g, 4.98 mmol), potassium phosphate tribasic (2.85 g, 13.6 mmol) and tetrakis(triphenylphosphine)palladium(0) (0.262 g, 0.227 mmol) in N,N-dimethylformamide (22 m]L) was degassed via three vacuum/nitrogen ingress cycles and then heated at 100° C. for approximately 18 h. After cooling to room temperature, the reaction mixture was poured into water and extracted three times with ethyl acetate. The combined organic extracts were washed with brine, dried (MgSO4) and concentrated in vacuo. Purification of the crude residue by flash chromatography on silica gel (gradient elution; 0%-25% ethyl acetate/hexanes as eluent) afforded 1-5 (0.967 g) as a colorless oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | With acetyl chloride at 0 - 20℃; | 59 Example 59. 2-(2-{5-[2-(Carboxymethyl)-4-chlorophenyl]thiophen-2-yl} -5-chlorophenyl)acetic Acetyl chloride (1.43 ml, 20.0 mmol) was added to a stirred solution of 2-bromo-5- chlorophenylacetic acid (2.00 g, 8.00 mmol) in MeOH (50 ml) at 0°C. The reaction was then stirred at r.t. overnight and the solvent was removed in vacuo. The crude material was dissolved in Et02 (-100 ml) and washed with diluted Na2C03. The organic phase was dried over MgS04 and removed in vacuo. Yield: 1.93 g (91%). LC-MS: m/z = 263, 265 (M + 17, 19) The material from above (866 mg, 3.29 mmol) in dry 1,4 dioxane (15 ml) was added to bis(pinacolato)diboron (918 mg, 3.62 mmol) and AcOK (1.19 g, 12.2 mmol). The stirred mixture was flushed with argon and l,l'-bis(diphenylphosphino)ferrocene-palladium(II)dichloride (120 mg, 0.164 mmol) was added. The reaction was heated in a sealed tube at 100°C for 3 hours. Cooled and diluted with Et20. The organic phase was washed with water and brine, dried over MgS04 and removed in vacuo. The crude material was dissolved in toluene and purified by flash chromatography (5% EtOAc in toluene, 200 ml silica). Yield: 511 mg (50%) as a colourless oil. LC-MS: m/z = 311 (M + 1). Argon was flushed through a stirred solution of the material from above (140 mg, 0.451 mmol) and 2,5-dibromothiophene (32.7 mg, 0.135 mmol) in a mixture of toluene (3 ml) and MeOH (3 ml). K2C03 (374 mg, 2.71 mmol) and PEPPSI-iPr (16.5 mg, 0.0230 mmol) were added and the reaction heated at 60°C for 3 hours. The solvents were removed in vacuo. The crude material was dissolved in a mixture of water, MeOH and some 1 M NH4HCO3 and purified by prep-HPLC (5- 40% MeCN, in 50 mM NH3/NH4HCO3 buffer). The combined pure fractions were concentrated to dryness. The compound was dissolved in water and some 1 M HC1 was added. The mixture was extracted with EtOAc. The organic phase was dried over MgS04 and concentrated in vacuo. Yield: 15 mg (8%) as a white solid. ¾ NMR (400 MHz, DMSO-i 6): δ 3.77 (s, 4H), 7.15 (s, 2H), 7.42 (d, J2.0 Hz, 0.4H), 7.44 (d, J2.0 Hz, 1.6H), 7.45 (s, 1.6H), 7.47 (s, 0.4 H), 7.51 (d, J2.3 Hz, 2 H). HPLC: Rt = 2.59 mm, 95% (254 nm, 10-40% MeCN in 10 mM buffer, XBndge) and Rt = 1.65 mm, 97% (214 nm, 10-90% MeCN in 10 mM buffer, XBndge). LC-MS: m/z = 438 (M + 18). |
91% | With acetyl chloride at 0 - 20℃; | 59 Example 59. 2-(2-{5-[2-(Carboxymethyl)-4-chlorophenyllthiophen-2-yl|-5- chlorophenyPacetic acid (9708 062) Acetyl chloride (1.43 ml, 20.0 mmol) was added to a stirred solution of 2-bromo-5- chlorophenyl acetic acid (2.00 g, 8.00 mmol) in MeOH (50 ml) at 0°C. The reaction was then stirred at r.t. overnight and the solvent was removed in vacuo. The crude material was dissolved in Et02 (-100 ml) and washed with diluted Na2C03. The organic phase was dried over MgS04 and removed in vacuo. Yield: 1.93 g (91%). LC-MS: m/z = 263, 265 (M + 17, 19) |
With thionyl chloride at 0 - 20℃; | 248.1 EXAMPLE 248 5-chloro-2-(2-chloro-6-fluorophenyl)- 10-(methylsulfonyl)- 1 H-phenanthro[9, 10-d] imidazoleStep 1 : Methyl (2-bromo-5-chlorophenyl)acetate To a solution of (2-bromo-5-chlorophenyl)acetic acid (4.99 g, 20 mmol) in methanol (100 mL) at 0 0C was slowly added thionyl chloride (2.2 mL, 30 mmol). The resulting solution was stirred at 0 0C for 10 minutes, then warmed to room temperature and stirred overnight. The reaction mixture was concentrated under reduced pressure. The crude material was dissolved in hexanes, filtered through Celite and the filtrate concentrated to yield methyl (2-bromo-5-chlorophenyl)acetate (5.13 g) as a colourless oil. |
With sulfuric acid for 15h; Heating / reflux; | 1.A EXAMPLE 1; 2-[2-(1-[(3S,4R)-1-Tert-Butyl-4-(2,4-Difluorophenyl)Pyrrolidin-3-yl]Carbonyl}Piperidin-4-yl)-5-Chlorophenyl]-N-Methylacetamide (1-11); Step A: Preparation of Methyl(2-Bromo-5-Chlorophenyl)Acetate (1-2) A solution of (2-bromo-5-chlorophenyl)acetic acid (1-1) (15.0 g, 60;1 mmol) and concentrated sulfuric acid (0.150 mL of a 36N solution) in methanol (120 mL) was heated at reflux for approximately 15 h. After cooling to room temperature, the reaction mixture was concentrated in vacuo and the residue partitioned between methylene chloride and saturated aqueous sodium bicarbonate. The organic layer was separated and the aqueous phase re-extracted twice with methylene chloride. The combined organic extracts were washed with water, brine, dried (MgSO4) and the volatiles evaporated. The residual colorless liquid (15.9 g) was used without further purification in the Step C below. | |
With sulfuric acid for 5h; Schlenk technique; Reflux; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine In acetonitrile at 110℃; | 174.A A. 5-chloro-2-[(1£)-3-(1,1-dimethylethoxy)-3-oxo-1-propenyl]benzeneacetic acid methyl ester EPO To a solution of 2-bromo-5-chlorobenzeneacetic acid methyl ester (2.0 g, 7.6 mmol) and 2-propenoic acid tert-butyl ester (1.2 mL, 8.4 mmol) in acetonitrile (5 ml_) was added diisopropylethylamine (1.3 mL, 7.6 mmol), followed by bis(triphenylphosphine)palladium(ll) acetate (1.3 g, 1.7 mmol), and the mixture heated at 110 °C in a sealed tube overnight. The mixture was diluted with ether (300 mL), filtered and concentrated in vacuo. Purified by chromatography on silica afforded Intermediate 174a (1.5 g) as a light yellow oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With cesium fluoride In 1,2-dimethoxyethane for 4.16667h; Heating / reflux; | 248.2 Step 2 : Methyl [4-chloro-4'-(methylthio)biphenyl-2-yl]acetateA mixture of methyl (2-bromo-5-chlorophenyl)acetate (527 mg, 2 mmol from Step 1 above, [4- (methylthio)phenyl]boronic acid (320 mg, 2.2 mmol), cesium fluoride (608 mg, 4 mmol) and Pd(PPh3)4(115 mg, 0.1 mmol) in DME (10 mL) was purged with nitrogen for 10 minutes, followed by heating at reflux for 4 hours. The reaction mixture was then cooled to room temperature, diluted with water and ethyl acetate. The organic layer was washed with water (3 times), dried over Na2SO4, filtered and concentrated. The material was purified by flash chromatography on silica (100% toluene) to provide methyl [4-chloro-4'-(methylthio)biphenyl-2-yl]acetate (554 mg). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Stage #1: methyl (2-bromo-5-chlorophenyl)acetate With n-butyllithium; diisopropylamine In tetrahydrofuran; hexanes at -78 - 0℃; for 0.833333h; Stage #2: methyl iodide In tetrahydrofuran; hexanes for 1h; | 2.A 4-[2-(2-Azetidin-1-yl-1-Methyl-2-Oxoethyl)-4-Chlorophenyl]-1-[(3S,4R)-1-Tert-Butyl-4-(2,4-Difluorophenyl)Pyrrolidin-3-yl]Carbonyl}Piperidine (2-7); Step A: Preparation of Methyl 2-(2-Bromo-5-Chlorophenyl)Propanoate (2-1) A solution of n-butyllithium (1.67 mL of a 2.5 M solution in hexanes, 4.17 mmol) was added dropwise via syringe to a stirred solution of diisopropylamine (0.61 mL, 4.36 mmol) in tetrahydrofuran (10 mL) at -78° C. After approximately 10 min, the reaction mixture was warmed to 0° C. and aged for another 10 min. After re-cooling to -78° C., a solution of methyl (2-bromo-5-chlorophenyl)acetate (1-2) (1.00 g, 3.79 mmol) in tetrahydrofuran (10 mL) was added dropwise via syringe and the resulting yellow mixture was stirred at -78° C. for approximately 30 min. Iodomethane (0.35 mL, 5.69 mmol) was added and after 1 h, the reaction mixture was warmed to ambient temperature and quenched with saturated aqueous ammonium chloride. The resulting mixture was poured into water and extracted three times with ethyl acetate. The combined organic extracts were washed with brine, dried (MgSO4) and concentrated in vacuo. Purification of the crude residue by flash chromatography on silica gel (gradient elution; 0-20% ethyl acetate/hexanes as eluent) furnished 2-1 as a colorless oil (1.00 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 3 h / 100 °C / Inert atmosphere; Sealed tube 2: potassium carbonate; [1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene](3-chloropyridyl)palladium(ll) dichloride / toluene; methanol / 3 h / 60 °C / Inert atmosphere | ||
Multi-step reaction with 2 steps 1: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 3 h / 100 °C / Inert atmosphere 2: potassium carbonate; [1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene](3-chloropyridyl)palladium(ll) dichloride / toluene; methanol / 3 h / 60 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
50% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium acetate In 1,4-dioxane at 100℃; for 3h; Inert atmosphere; Sealed tube; | 59 Example 59. 2-(2-{5-[2-(Carboxymethyl)-4-chlorophenyl]thiophen-2-yl} -5-chlorophenyl)acetic Acetyl chloride (1.43 ml, 20.0 mmol) was added to a stirred solution of 2-bromo-5- chlorophenylacetic acid (2.00 g, 8.00 mmol) in MeOH (50 ml) at 0°C. The reaction was then stirred at r.t. overnight and the solvent was removed in vacuo. The crude material was dissolved in Et02 (-100 ml) and washed with diluted Na2C03. The organic phase was dried over MgS04 and removed in vacuo. Yield: 1.93 g (91%). LC-MS: m/z = 263, 265 (M + 17, 19) The material from above (866 mg, 3.29 mmol) in dry 1,4 dioxane (15 ml) was added to bis(pinacolato)diboron (918 mg, 3.62 mmol) and AcOK (1.19 g, 12.2 mmol). The stirred mixture was flushed with argon and l,l'-bis(diphenylphosphino)ferrocene-palladium(II)dichloride (120 mg, 0.164 mmol) was added. The reaction was heated in a sealed tube at 100°C for 3 hours. Cooled and diluted with Et20. The organic phase was washed with water and brine, dried over MgS04 and removed in vacuo. The crude material was dissolved in toluene and purified by flash chromatography (5% EtOAc in toluene, 200 ml silica). Yield: 511 mg (50%) as a colourless oil. LC-MS: m/z = 311 (M + 1). Argon was flushed through a stirred solution of the material from above (140 mg, 0.451 mmol) and 2,5-dibromothiophene (32.7 mg, 0.135 mmol) in a mixture of toluene (3 ml) and MeOH (3 ml). K2C03 (374 mg, 2.71 mmol) and PEPPSI-iPr (16.5 mg, 0.0230 mmol) were added and the reaction heated at 60°C for 3 hours. The solvents were removed in vacuo. The crude material was dissolved in a mixture of water, MeOH and some 1 M NH4HCO3 and purified by prep-HPLC (5- 40% MeCN, in 50 mM NH3/NH4HCO3 buffer). The combined pure fractions were concentrated to dryness. The compound was dissolved in water and some 1 M HC1 was added. The mixture was extracted with EtOAc. The organic phase was dried over MgS04 and concentrated in vacuo. Yield: 15 mg (8%) as a white solid. ¾ NMR (400 MHz, DMSO-i 6): δ 3.77 (s, 4H), 7.15 (s, 2H), 7.42 (d, J2.0 Hz, 0.4H), 7.44 (d, J2.0 Hz, 1.6H), 7.45 (s, 1.6H), 7.47 (s, 0.4 H), 7.51 (d, J2.3 Hz, 2 H). HPLC: Rt = 2.59 mm, 95% (254 nm, 10-40% MeCN in 10 mM buffer, XBndge) and Rt = 1.65 mm, 97% (214 nm, 10-90% MeCN in 10 mM buffer, XBndge). LC-MS: m/z = 438 (M + 18). |
50% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium acetate In 1,4-dioxane at 100℃; for 3h; Inert atmosphere; | 59 Example 59. 2-(2-{5-[2-(Carboxymethyl)-4-chlorophenyllthiophen-2-yl|-5- chlorophenyPacetic acid (9708 062) The material from above (866 mg, 3.29 mmol) in dry 1,4 dioxane (15 ml) was added to bis(pinacolato)diboron (918 mg, 3.62 mmol) and AcOK (1.19 g, 12.2 mmol). The stirred mixture was flushed with argon and l,l'-bis(diphenylphosphino)ferrocene- palladium(II)dichloride (120 mg, 0.164 mmol) was added. The reaction was heated in a sealed tube at 100°C for 3 hours. Cooled and diluted with Et20. The organic phase was washed with water and brine, dried over MgS04 and removed in vacuo. The crude material was dissolved in toluene and purified by flash chromatography (5% EtOAc in toluene, 200 ml silica). Yield: 511 mg (50%) as a colourless oil. LC-MS: m/z = 311 (M + 1). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: potassium acetate; (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride / 1,4-dioxane / 3 h / 100 °C / Inert atmosphere 2: potassium carbonate; [1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene](3-chloropyridyl)palladium(ll) dichloride / toluene; methanol / 3 h / 60 °C / Inert atmosphere 3: sodium hydrogencarbonate; water / methanol |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With sodium hydride In mineral oil at 10 - 15℃; for 1h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: sodium hydride / mineral oil / 1 h / 10 - 15 °C 2: methanol / 8 h / Reflux 3: potassium <i>tert</i>-butylate / N,N-dimethyl-formamide / 3 h / 125 °C / Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: sodium hydride / mineral oil / 1 h / 10 - 15 °C 2: methanol / 8 h / Reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: tetra(n-butyl)ammonium hydrogensulfate; potassium carbonate / toluene / 12 h / 80 °C / Schlenk technique 2: potassium hydroxide / water; tetrahydrofuran / 6 h / Reflux 3: potassium carbonate; bis-triphenylphosphine-palladium(II) chloride / dimethyl sulfoxide / 2 h / 140 °C / Schlenk technique; Inert atmosphere | ||
Multi-step reaction with 3 steps 1: tetra(n-butyl)ammonium hydrogensulfate; potassium carbonate / toluene / 12 h / 80 °C / Schlenk technique 2: potassium hydroxide / water; tetrahydrofuran / 6 h / Reflux 3: potassium carbonate; bis-triphenylphosphine-palladium(II) chloride / dimethyl sulfoxide / 36 h / 140 °C / Schlenk technique; Inert atmosphere |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: tetra(n-butyl)ammonium hydrogensulfate; potassium carbonate / toluene / 12 h / 80 °C / Schlenk technique 2: potassium hydroxide / water; tetrahydrofuran / 6 h / Reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With tetra(n-butyl)ammonium hydrogensulfate; potassium carbonate In toluene at 80℃; for 12h; Schlenk technique; |
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