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CAS No. : | 742058-39-5 | MDL No. : | MFCD07375140 |
Formula : | C11H9BrN2O | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | RDGZEALFIOPSCC-UHFFFAOYSA-N |
M.W : | 265.11 | Pubchem ID : | 42553055 |
Synonyms : |
|
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P233-P260-P261-P264-P270-P271-P280-P301+P312-P302+P352-P304-P304+P340-P305+P351+P338-P312-P321-P330-P332+P313-P337+P313-P340-P362-P403-P403+P233-P405-P501 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
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* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With palladium diacetate; triethylamine; tris-(o-tolyl)phosphine |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | Stage #1: benzyl alcohol With sodium hydride In tetrahydrofuran for 0.166667h; Stage #2: 5-Bromo-2-chloropyrimidine In tetrahydrofuran at 20℃; Stirring overnight; | 5-1 2-Benzyloxy-5-bromopyrimidine To a mixture of benzyl alcohol (0.123 g, 1.14 mmol) and tetrahedrofuran (12.0 mL) was added sodium hydride (60 % oil suspension, 0.050 g, 1.2 mmol) portionwise. After 10 min, 5-bromo-2-chloropyrimidine (0.200 g, 1.034 mmol) was added, and the mixture was stirred at room temperature overnight. The mixture was concentrated under reduced pressure. The residue was partitionated between ethyl acetate and water. The separated organic phase was washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure to give 2- benzyloxy-5-bromopyrimidine (0.269 g, 98 %) as a white solid. |
97% | Stage #1: benzyl alcohol With caesium carbonate In N,N-dimethyl-formamide; acetonitrile at 20℃; for 0.166667h; Inert atmosphere; Stage #2: 5-Bromo-2-chloropyrimidine In N,N-dimethyl-formamide; acetonitrile at 20℃; for 12h; Inert atmosphere; | General procedure for the synthesis of substitutedbenzyloxy halo pyrimidines (3a-3i, Scheme 1) In portion wise, Cesium carbonate (6.78 g, 20.6 mmol) was added to a stirred solution of benzyl alcohol (2.25 g, 20.6 mmol) in acetonitrile and dimethylformamide (1:1, 40 mL) under nitrogen atmosphere at room temperature. After 10 min, 5-bromo-2-chloropyrimidine (2.0 g, 10.3 mmol) was added and the mixture was stirred at the same temperature for overnight. The reaction was monitored by TLC; after completion of the reaction, reaction mixture was poured into ice-cold water; the resultant solid was filtered; solid was washed with water (3 x 10 mL) followed by n-pentane (2 x 10 mL) and air dried and recrystallized from benzene gave 3a (2.675 g) as white solid in 97 %yield, mp 102.9-105.6 °C, TLC Rf 0.34 (10 % EtOAc in hexanes as the eluent); 1H NMR (DMSO, 300 MHz); δ 8.78 (s, 2H, Pyrimidine H), 7.34-7.47 (m, 5H, ArH), 5.38 (s, 2H, ArCH2); 13CNMR (DMSO, 100 MHz) δ 163.16,159.83, 136.15, 128.39, 128.02, 127.95, 111.91, 68.95; IR (KBr) 1271(C-O), 1179 (C-N), 525 (C-Br) cm-1; HRMS(ES+) exact mass calculated for [M+H]+ (C11H9BrN2O) requires m/z 264.989, found m/z 265.091, 267.301. |
With potassium <i>tert</i>-butylate In N,N-dimethyl-formamide at 20℃; for 1.5h; | 4.1 (l) 2-Benzyloxy-5-bromo-pyrimidine; Potassium tert-butoxide (6.96 g) was added to a solution of 5-bromo-2-chloro~ pyrimidine (10 g) and benzyl alcohol (6.4 ml) in N,N-dimethylformamide (140 ml) and the mixture was stirred at room temperature for 1.5 hours. Water was added to the mixture and the precipitated solid was collected by filtration, washed with methanol, dried to give the titled compound (10.6 g). MS (m/z): 265/267 [M+H]+. |
10.2 g | With potassium <i>tert</i>-butylate In N,N-dimethyl-formamide at 20℃; for 2h; | 3.1 Step: 2-benzyloxy-5-bromo pyrimidine A mixture of 5-bromo-2-chloro-pyrimidine (10 g, 51.7 mmol) and benzylalcohol (6.4 mL, 62 mmol) was dissolved in N, N- dimethyl formamide (140 mL),and thereto is added potassium tert-butoxide (6.96 g, 62 mmol), reaction atroom temperature 2h. After completion of the reaction, water was added tothe reaction solution to precipitate a solid. The solid was collected byfiltration under reduced pressure, the filter cake washed with a small amountof methanol, and dried to give 2-benzyloxy-5-bromo - pyrimidine (white solid,10.2 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium t-butanolate In N,N-dimethyl-formamide at 50℃; for 1h; | 4.2 (2) 4-(2-Benzyloxy-pyrimidin-5-yl)-morpholine; Tris(dibenzylideneacetone)dipalladium (1.78 g), 2-(di-tert-butylphosphino)- biphenyl (2.32 g) and sodium tert-butoxide (4.49 g) were added to a solution of 2- benzyloxy-5-bromo-pyrimidine (10.3 g) and morpholine (4.1 ml) in toluene (180 ml) and the mixture was stirred under nitrogen atmosphere at 50°C for an hour. The reaction mixture was cooled to room temperature. Water and ethyl acetate were added and the organic layer was separated, washed with a saturated brine, dried over magnesium sulfate and concentrated in vacuo. The residue was triturated with ethyl acetate and hexane to give the titled compound (9.12 g). MS (m/z): 272 [M+H]+. | |
4.75 g | With tris-(dibenzylideneacetone)dipalladium(0); johnphos; sodium t-butanolate In 1,4-dioxane at 50℃; for 2h; Inert atmosphere; | 3.2 Step two: 4-[2-(benzyloxy)pyrimidin-5-yl]morpholine The 2-benzyloxy-5-bromo-pyrimidine (5.3 g, 20 mmol) and morpholine(2.1 mL, 24 mmol) was dissolved in 1,4-dioxane (60 mL) under argon protection underthe was added Pd 2 (dba) 3 (920 mg, 1mmol), 2- (di-t-butylphosphino) - biphenyl (1.2 g, 4 mmol) and sodiumtert-butoxide (2.3 g, 24 mmol), the mixture The reaction was heated to 50 °C 2h. After completion of the reaction, was cooled to room temperature, thereaction mixture was added water, extracted with ethyl acetate, the organicphase was dried over anhydrous sodium sulfate, filtered, and the solvent wasevaporated to dryness, purified by silica gel column chromatography to give 4-(2-benzyloxy - pyrimidin-5-yl) - morpholine (yellow solid, 4.75 g). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol 3: NaH / 1,2-dimethoxy-ethane 4: K2CO3 / dimethylformamide 5: aq. NaOH 6: (COCl)2 / 1,2-dichloro-ethane |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol 3: NaH / 1,2-dimethoxy-ethane 4: K2CO3 / dimethylformamide 5: aq. NaOH |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol 3: NaH / 1,2-dimethoxy-ethane |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol 3: NaH / 1,2-dimethoxy-ethane 4: K2CO3 / dimethylformamide |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 7 steps 1: Pd(OAc)2; P(o-Tol)3; Et3N 2: H2; Et3N / Pd/C / ethanol 3: NaH / 1,2-dimethoxy-ethane 4: K2CO3 / dimethylformamide 5: aq. NaOH 6: (COCl)2 / 1,2-dichloro-ethane 7: acetonitrile |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 8 steps 1.1: Pd(OAc)2; P(o-Tol)3; Et3N 2.1: H2; Et3N / Pd/C / ethanol 3.1: NaH / 1,2-dimethoxy-ethane 4.1: K2CO3 / dimethylformamide 5.1: aq. NaOH 6.1: (COCl)2 / 1,2-dichloro-ethane 7.1: acetonitrile 8.1: dimethylformamide 8.2: NaOEt |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 9 steps 1.1: Pd(OAc)2; P(o-Tol)3; Et3N 2.1: H2; Et3N / Pd/C / ethanol 3.1: NaH / 1,2-dimethoxy-ethane 4.1: K2CO3 / dimethylformamide 5.1: aq. NaOH 6.1: (COCl)2 / 1,2-dichloro-ethane 7.1: acetonitrile 8.1: dimethylformamide 8.2: NaOEt 9.1: iPrNEt / CH2Cl2 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
27% | With sodium carbonate In 1,2-dimethoxyethane; water at 90℃; for 1h; | 5-1 2-[4-(2-Benzyloxypyrimidin-5-yl)benzoylamino]-3-phenylpropionic acid methyl ester To a mixture of 4-[N-(1-methoxycarbonyl-2-phenylethyl)carbamoyl]phenylboronic acid (0.100 g, 0.306 mmol), 2-benzyloxy-5-bromopyrimidine (0.081 g, 0.31 mmol) and 1,2-dimethoxyethane (2 mL) was added 1.8 N sodium carbonate aqueous solution (0.500 mL, 0.917 mmol) followed by tetrakis(triphenylphosphine)palladium (0.036 g, 0.031 mmol). The mixture was stirred at 90° C for 1 hour. After cooled to room temperature, the mixture was partitioned between ethyl acetate and water. The separated organic phase was washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure. The crude product was suspended in methanol, collected by filtration, washed with methanol, and dried under reduced pressure to give 2-[4-(2-benzyloxypyrimidin-5-yl)benzoylamino]-3-phenylpropionic acid methyl ester (0.039 g, 27 %) as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | With bis-triphenylphosphine-palladium(II) chloride; sodium carbonate; In water; at 80℃; for 0.5h;Inert atmosphere; Green chemistry; | To a oven dried 25 mL round bottom flask were added 2-(benzyloxy)-5-bromopyrimidine (0.15 g, 0.568 mmol), 3-(methylsulfonyl) phenylboronic acid (0.125 g, 0.625 mmol), and 0.5 N aqueous sodium carbonate (0.240 g, 2.27 mmol in 4.52 mL water) followed by 5 mL water and were degassed by bubbling with nitrogen gas for 15 min. PdCl2(PPh3)2 (0.039 g, 0.0056 mmol) was added to the above reaction mixture and then heated to 80 C for 30 min. The reaction mixture was cooled to room temperature, the resultant solid was filtered and solid was washed with water and air dried. The crude product was recrystallized from dichloromethane in petroleum ether to give 4a(131 mg) in 67 % yield as off-white solid, mp (recrystallized from dichloromethane in petroleum ether) 180.1-184.4 C; TLC Rf 0.25 (40 % EtOAc in hexanes as the eluent); 1H NMR (DMSO, 300 MHz) delta 9.06 (s, 2H,pyrimidine H), 8.26 (s, 1H, ArH), 8.10 (d, J = 7.8 Hz, 1H,ArH), 7.95 (d, J = 7.8 Hz, 1H, ArH), 7.78 (t, J = 7.5 Hz,1H, ArH), 7.49 (d, J = 6.9 Hz, 2H, ArH), 7.44-7.34 (m, 3H, ArH), 5.48 (s, 2H, ArCH2), 3.30 (s, 3H, SO2Me); 13C NMR (DMSO, 100 MHz) delta 164.32, 157.85, 141.84, 136.49,135.20, 131.40, 130.19, 128.41, 127.95, 126.20, 126.13,124.72, 68.62, 43.31; IR (KBr) 1149 (C-O),1298 (SO2),1186 (C-N) cm-1; HRMS (ES+) exact mass calculated for[M+H]+ (C18H16N2O3S) requires m/z 341.088, found m/z 341.080. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | With bis-triphenylphosphine-palladium(II) chloride; sodium carbonate In water at 80℃; for 0.5h; Inert atmosphere; Green chemistry; | General procedure for the preparation (benzyloxy)-5-(3-(methylsulfonyl) phenyl) pyrimidine (4a) General procedure: To a oven dried 25 mL round bottom flask were added 2-(benzyloxy)-5-bromopyrimidine (0.15 g, 0.568 mmol), 3-(methylsulfonyl) phenylboronic acid (0.125 g, 0.625 mmol), and 0.5 N aqueous sodium carbonate (0.240 g, 2.27 mmol in 4.52 mL water) followed by 5 mL water and were degassed by bubbling with nitrogen gas for 15 min. PdCl2(PPh3)2 (0.039 g, 0.0056 mmol) was added to the above reaction mixture and then heated to 80 °C for 30 min. The reaction mixture was cooled to room temperature, the resultant solid was filtered and solid was washed with water and air dried. The crude product was recrystallized from dichloromethane in petroleum ether to give 4a(131 mg) in 67 % yield as off-white solid |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
60% | With ammonium hydroxide; copper(l) iodide; potassium carbonate; <i>L</i>-proline In dimethyl sulfoxide at 85℃; for 18h; Sealed tube; Inert atmosphere; | 10.1 Step One. 2-(Benzyloxy)pyrimidin-5-amine (A2) Step One. 2-(Benzyloxy)pyrimidin-5-amine (A2): 2-(Benzyloxy)-5- bromopyrimidine Al, (265 mg, 1.00 mmol), copper iodide (38 mg, 0.20 mmol), L-proline (46 mg, 0.40 mmol), and potassium carbonate (207 mg, 1.50 mmol) were combined in a sealed tube. The vessel was evacuated and backfilled with dry nitrogen before the addition of dimethylsulfoxide (1.0 mL). After 5 minutes of stirring, concentrated ammonium hydroxide (0.10 mL, 1.5 mmol) was added and the mixture heated at 85 °C for 18 h. After this time, the mixture was cooled, diluted with water (10 mL), and ethyl acetate (10 mL). The ethyl acetate was dried over sodium sulfate, the drying agent was removed by filtration, and the resulting solution was concentrated under reduced pressure. The residue obtained was purified by chromatography (silica, 25-100% ethyl acetate/hexanes) to afford compound A2 (120 mg, 60%) as a tan solid: 1H NMR (500 MHz, CDC13) δ 8.04 (s, 2H), 7.46 (d, J = 7.1 Hz, 2H), 7.36- 7.26 (m, 3H), 5.36 (s, 2H), 3.40 (br s, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: ammonium hydroxide; copper(l) iodide; <i>L</i>-proline; potassium carbonate / dimethyl sulfoxide / 18 h / 85 °C / Sealed tube; Inert atmosphere 2: dimethyl sulfoxide / 2 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1.1: ammonium hydroxide; copper(l) iodide; <i>L</i>-proline; potassium carbonate / dimethyl sulfoxide / 18 h / 85 °C / Sealed tube; Inert atmosphere 2.1: dimethyl sulfoxide / 2 h / 20 °C 3.1: triethylamine / 1,4-dioxane / 0.17 h / 55 °C 3.2: 0.75 h / 55 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With tris-(dibenzylideneacetone)dipalladium(0); johnphos; sodium t-butanolate In toluene at 55℃; for 3h; Inert atmosphere; | 91 Benzyl 4- (4- (2- (benzyloxy) pyrimidin-5-yl) piperazin-1-yl) piperidine-1-carboxylate (91c) To a solution of 2- (benzyloxy) -5-bromopyrimidine (91a) (2.65 g, 10.0 mmol) in Toluene (50 mL) were added benzyl 4- (piperazin-1-yl) piperidine-1-carboxylate (91b) (3.03 g, 10.0 mmol) , Pd2 (dba) 3 (460 mg, 0.50 mmol) , Johnphos (600 mg, 2.00 mmol) , and t-BuONa (1.44 g, 15.0 mmol) . The mixture was heated at 55 under N2 for 3 h. After cooled to room temperature, the mixture was diluted with water (100 mL) and extracted with DCM (3 × 50 mL) . The extracts were dried over Na2SO4. Solvents were evaporated under reduced pressure. The residue was purified by silica gel column, eluting with 1-2.5MeOH in DCM to give benzyl 4- (4- (2- (benzyloxy) pyrimidin-5-yl) piperazin-1-yl) piperidine-1-carboxylate (91c) . MS-ESI (m/z) : 488 [M + 1] +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
68% | With [2,2]bipyridinyl; (4s,6s)-2,4,5,6-tetra(9H-carbazol-9-yl)isophthalonitrile; potassium carbonate; nickel dibromide In N,N-dimethyl-formamide at 30℃; for 24h; Schlenk technique; Inert atmosphere; Sealed tube; Irradiation; stereoselective reaction; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80% | With MePhos Pd G4 In 1,2-dichloro-ethane at 50℃; |
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