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CAS No. : | 877773-17-6 | MDL No. : | MFCD09878903 |
Formula : | C10H7F3N2O2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | VSKCVMICQDVGNJ-UHFFFAOYSA-N |
M.W : | 244.17 | Pubchem ID : | 53408454 |
Synonyms : |
|
Num. heavy atoms : | 17 |
Num. arom. heavy atoms : | 9 |
Fraction Csp3 : | 0.2 |
Num. rotatable bonds : | 3 |
Num. H-bond acceptors : | 6.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 52.38 |
TPSA : | 54.98 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -5.93 cm/s |
Log Po/w (iLOGP) : | 1.68 |
Log Po/w (XLOGP3) : | 2.62 |
Log Po/w (WLOGP) : | 3.52 |
Log Po/w (MLOGP) : | 2.04 |
Log Po/w (SILICOS-IT) : | 2.87 |
Consensus Log Po/w : | 2.55 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.2 |
Solubility : | 0.155 mg/ml ; 0.000634 mol/l |
Class : | Soluble |
Log S (Ali) : | -3.42 |
Solubility : | 0.0919 mg/ml ; 0.000376 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -3.88 |
Solubility : | 0.0322 mg/ml ; 0.000132 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.94 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P301+P312-P302+P352-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
80%; 15% | With potassium carbonate;tetra-(n-butyl)ammonium iodide; In acetonitrile; at 90℃; for 1 - 2h;Heating / reflux; | Step 5: 1-(2,4-Dichlorobenzyl)-6-trifluoromethyl-1H-indazole-3-carboxylic Acid methyl ester 6-Trifluoromethyl-1H-indazole-3-carboxylic acid methyl ester (2.75 g, 0.0112 mol) was dissolved in acetonitrile (50 mL), and potassium carbonate (10 g, 0.07 mol), <strong>[94-99-5]2,4-dichlorobenzyl chloride</strong> (2.42 g, 0.01239 mol) and tetrabutylammonium iodide (catalytic) were added. The reaction mixture was heated to reflux and refluxed for 2 h under good stirring. The progress of the reaction was monitored by TLC. After completion of the reaction, potassium carbonate was filtered while hot and then washed with acetone. The combined solvents were distilled off under reduced pressure to afford the crude mixture of N1 and N2 benzylated products. The isomers were separated by column chromatography (silica gel, eluent started with hexane then changed to 8:2 hexane, ethyl acetate). 1-(2,4-Dichlorobenzyl)-6-trifluoromethyl-1H-indazole-3-carboxylic acid methyl ester. Yield: 3.62 g (80%), white crystals mp 118-120 C. 1H NMR (CDCl3) 8.39 (d, J=8.4 Hz, 1H) 7.74 (s, 1H), 7.57 (d, J=8.4 Hz, 1H), 7.45 (d, J=2.1 Hz, 1H), 7.12 (dd, J=8.4 and 2.1 Hz, 1H), 6.78 (d, J=8.4 Hz, 1H), 5.82 (s, 2H), 4.07 (s, 3H). MS (FAB) m/z: 403 (M++1). |
With tetra-(n-butyl)ammonium iodide; potassium carbonate; In acetonitrile; at 90℃; | Step 5: l-(2,4-Dichlorobenzyl)-6-trifluoromethyl-lH-indazole-3-carboxylic Acid methyl ester. -Trifluoromethyl-lH-indazole-S-carboxylic acid methyl ester (2.75 g, 0.0112 mol) was dissolved in acetonitrile (50 mL), and potassium carbonate (10 g, 0.07 mol),<strong>[94-99-5]2,4-dichlorobenzyl chloride</strong> (2.42 g, 0.01239 mol) and tetrabutylammonium iodide (catalytic) were added. The reaction mixture was heated to reflux and refluxed for 2 h under good stirring. The progress of the reaction was monitored by TLC. After completion of the reaction, potassium carbonate was filtered while hot and then washed with acetone. The combined solvents were distilled off under reduced pressure to afford the crude mixture of Nl and N2 benzylated products. The isomers were separated by column chromatography (silica gel, eluent started with hexane then changed to 8:2 hexane, ethyl acetate).l-(2,4-Dichlorobenzyl)-6-trifluoromethyl-lH-indazole-3-carboxylic acid methyl ester. Yield: 3.62 g (80%), white crystals mp 118-120 0C. J H NMR (CDCl3)8.39 (d, J = 8.4 Hz, 1 H) 7.74 (s, 1 H), 7.57 (d, J = 8.4 Hz, 1 H), 7.45 (d, J = 2.1 Hz, 1 H), 7.12 (dd, J = 8.4 and 2.1 Hz, 1 H), 6.78 (d, J = 8.4 Hz, 1 H), 5.82 (s, 2 H), 4.07 (s, 3 H).MS (FAB) m/z: 403 (M+ + 1).2-(2,4-Dichlorobenzyl)-6-trifluoromethyl-2H-indazole-3-carboxylic acid methyl ester. Yield: 680 mg (15%), white crystals mp 132-134 0C. * H NMR (DMSO- d-6) 8.27 (s, 1 H), 8.20 (d, J = 8.7 Hz, 1 H), 7.76 (d, J = 1.8 Hz, 1 H), 7.57 (d, J = 8.7 Hz, 1 H), 7.30 (dd, J = 8.3 and 1.8 Hz, 1 H), 6.78 (d, J = 8.3 Hz, 1 H), 6.17 (s, 2 H), 3.96 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With tert.-butylnitrite; acetic acid at 90 - 95℃; for 1.83333 - 2h; | 2.4 Step 4: 6-Trifluoromethyl-1H-indazole-3-carboxylic acid methyl ester To a solution of (2-acetylamino-4-trifluoromethylphenyl)-acetic acid methyl ester (16 g, 0.058 mol) in acetic acid (50 mL) was added dropwise t-butyl nitrite (90%) (7.35 g, 0.063 mol) over a period of 20 min. at 90-95° C. The mixture was then stirred for 0.5 h at 95° C., poured into cold water and stirred for 1 h. The precipitates were collected by filtration and washed with water. The crude material was dissolved in ethyl acetate and dried over sodium sulfate. The solvent was removed in vacuo. This material (13.4 g, 95%) was used without further purification in the next step. A small sample was crystallized from ethyl acetate to yield a white solid, mp 240-242° C. 1H NMR (DMSO-d-6) 8.25 (d, J=8.5 Hz, 1H), 8.04 (s, 1H), 7.58 (d, J=8.5 Hz, 1H), 3.95 (s, 3H). MS (FAB) m/z: 245.1 (M++1). |
With tert.-butylnitrite; acetic acid at 90 - 95℃; for 2.16667h; Cooling with ice; | 2.4 Step 4: 6-Trifluoromethyl-lH-indazole-3-carboxylic acid methyl ester.To a solution of (2-acetylamino-4-trifluoromethylphenyl)-acetic acid methyl ester (16 g, 0.058 mol) in acetic acid (50 mL) was added dropwise t-butyl nitrite (90%) (7.35 g, 0.063 mol) over a period of 20 min. at 90-95 0C. The mixture was then stirred for 0.5 h at 95 0C, poured into cold water and stirred for 1 h. The precipitates were collected by filtration and washed with water. The crude material was dissolved in ethyl acetate and dried over sodium sulfate. The solvent was removed in vacuo. This material (13.4 g, 95%) was used without further purification in the next step. A small sample was crystallized from ethyl acetate to yield a white solid, mp 240-242 0C. 1H NMR (DMSO- d-6) 8.25 (d, J = 8.5 Hz, 1 H), 8.04 (s, 1 H), 7.58 (d, J = 8.5 Hz, 1 H), 3.95 (s, 3 H). MS (FAB) m/z: 245.1 (M+ + 1). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1: potassium <i>tert</i>-butylate / <i>tert</i>-butyl alcohol / Reflux 2: dimethyl sulfoxide; sodium chloride / water / 120 °C 3: hydrogen / 5% Pd(II)/C(eggshell) / toluene / 20 °C / 760.05 Torr 4: tert.-butylnitrite; acetic acid / 2.17 h / 90 - 95 °C / Cooling with ice | ||
Multi-step reaction with 4 steps 1: potassium <i>tert</i>-butylate / <i>tert</i>-butyl alcohol / 3 - 6 h / Heating / reflux 2: sodium chloride / water; dimethyl sulfoxide / 16 - 20 h / 120 °C 3: hydrogen / 5%-palladium/activated carbon / toluene / 1 - 5 h / 20 °C / 760.05 Torr 4: tert.-butylnitrite; acetic acid / 1.83 - 2 h / 90 - 95 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: dimethyl sulfoxide; sodium chloride / water / 120 °C 2: hydrogen / 5% Pd(II)/C(eggshell) / toluene / 20 °C / 760.05 Torr 3: tert.-butylnitrite; acetic acid / 2.17 h / 90 - 95 °C / Cooling with ice | ||
Multi-step reaction with 3 steps 1: sodium chloride / water; dimethyl sulfoxide / 16 - 20 h / 120 °C 2: hydrogen / 5%-palladium/activated carbon / toluene / 1 - 5 h / 20 °C / 760.05 Torr 3: tert.-butylnitrite; acetic acid / 1.83 - 2 h / 90 - 95 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: hydrogen / 5% Pd(II)/C(eggshell) / toluene / 20 °C / 760.05 Torr 2: tert.-butylnitrite; acetic acid / 2.17 h / 90 - 95 °C / Cooling with ice | ||
Multi-step reaction with 2 steps 1: hydrogen / 5%-palladium/activated carbon / toluene / 1 - 5 h / 20 °C / 760.05 Torr 2: tert.-butylnitrite; acetic acid / 1.83 - 2 h / 90 - 95 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux 5.1: hydrogen / 5% Pd(II)/C(eggshell) / dichloromethane; methanol / 20 °C / 760.05 Torr | ||
Multi-step reaction with 5 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux 5.1: hydrogen / 5%-palladium/activated carbon / methanol; dichloromethane / 760.05 Torr |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux 5.1: water; lithium hydroxide / tetrahydrofuran; methanol / 40 °C 5.2: 0 °C / pH 2 6.1: zinc-copper couple / diethyl ether / 48 h / Reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C | ||
Multi-step reaction with 3 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux 5.1: water; lithium hydroxide / tetrahydrofuran; methanol / 40 °C 5.2: 0 °C / pH 2 6.1: sodium hydroxide; dihydrogen peroxide / water; methanol / 6 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C | ||
Multi-step reaction with 2 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 5 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux 5.1: water; lithium hydroxide / tetrahydrofuran; methanol / 40 °C 5.2: 0 °C / pH 2 | ||
Multi-step reaction with 5 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux 5.1: methanol; lithium hydroxide; water / tetrahydrofuran / 2 - 3 h / 20 - 40 °C 5.2: 0 °C / pH 2 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux 5.1: water; lithium hydroxide / tetrahydrofuran; methanol / 40 °C 5.2: 0 °C / pH 2 6.1: hydrogen / 5% Pd(II)/C(eggshell) / dichloromethane; methanol / 20 °C / 760.05 Torr |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1.1: potassium carbonate; tetra-(n-butyl)ammonium iodide / acetonitrile / 90 °C 2.1: diisobutylaluminium hydride / dichloromethane / 2.25 h / -78 °C / Inert atmosphere 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 20 °C 4.1: dichloromethane / Reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux 5.1: methanol; lithium hydroxide; water / tetrahydrofuran / 2 - 3 h / 20 - 40 °C 5.2: 0 °C / pH 2 6.1: hydrogen / 5%-palladium/activated carbon / methanol; dichloromethane / 20 °C / 760.05 Torr |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 4 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux 5.1: methanol; lithium hydroxide; water / tetrahydrofuran / 2 - 3 h / 20 - 40 °C 5.2: 0 °C / pH 2 6.1: sodium hydroxide; dihydrogen peroxide / methanol; water / 6 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 6 steps 1.1: potassium carbonate / tetra-(n-butyl)ammonium iodide / acetonitrile / 1 - 2 h / 90 °C / Heating / reflux 2.1: diisobutylaluminium hydride / dichloromethane / 2 - 2.25 h / -78 °C 2.2: -78 °C 3.1: manganese(IV) oxide / dichloromethane / 0.5 - 3 h / 20 °C 4.1: dichloromethane / 3 - 12 h / Heating / reflux 5.1: methanol; lithium hydroxide; water / tetrahydrofuran / 2 - 3 h / 20 - 40 °C 5.2: 0 °C / pH 2 6.1: zinc copper / diethyl ether / 48 h / Heating / reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: caesium carbonate / N,N-dimethyl-formamide / 20 °C 2: water; sodium hydroxide / methanol / 2 h / 80 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1: caesium carbonate / N,N-dimethyl-formamide / 20 °C 2: water; sodium hydroxide / methanol / 2 h / 80 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1: 110 mg 2: 300 mg | With caesium carbonate In N,N-dimethyl-formamide at 20℃; | 1 Step 1: methyl 2-methyl-6-(trifluoromethyl)indazole-3-carboxylate (43A) and methyl 1-methyl-6-(trifluoromethyl)indazole-3-carboxylate (43B) Methyl 6-(trifluoromethyl)-1H-indazole-3-carboxylate (500.0 mg, 2.0 mmol, 1.0 equiv.) was dissolved in DMF (10 mL), then Cs2CO3(1.3 g, 4.1 mmol, 2.0 equiv.) was added. This was followed by the addition of MeI (0.13 mL, 2.0 mmol, 1.0 equiv.). The reaction mixture was stirred overnight at ambient temperature, then concentrated under vacuum. The residue was purified by flash column chromatography on silica gel, eluting with ethyl acetate/petroleum ether (1:5) to give methyl 2-methyl-6- (trifluoromethyl)indazole-3-carboxylate (43A, 110.0 mg) as a white solid and methyl 1- methyl-6-(trifluoromethyl)indazole-3-carboxylate (43B, 300.0 mg) as a white solid. LCMS Method A-1: [M+H]+= 259. |
1: 110 mg 2: 300 mg | With caesium carbonate In N,N-dimethyl-formamide at 20℃; | 1 Step 1: methyl 2-methyl-6-(trifluoromethyl)indazole-3-carboxylate (43A) and methyl 1-methyl-6-(trifluoromethyl)indazole-3-carboxylate (43B) Methyl 6-(trifluoromethyl)-1H-indazole-3-carboxylate (500.0 mg, 2.0 mmol, 1.0 equiv.) was dissolved in DMF (10 mL), then Cs2CO3(1.3 g, 4.1 mmol, 2.0 equiv.) was added. This was followed by the addition of MeI (0.13 mL, 2.0 mmol, 1.0 equiv.). The reaction mixture was stirred overnight at ambient temperature, then concentrated under vacuum. The residue was purified by flash column chromatography on silica gel, eluting with ethyl acetate/petroleum ether (1:5) to give methyl 2-methyl-6- (trifluoromethyl)indazole-3-carboxylate (43A, 110.0 mg) as a white solid and methyl 1- methyl-6-(trifluoromethyl)indazole-3-carboxylate (43B, 300.0 mg) as a white solid. LCMS Method A-1: [M+H]+= 259. |
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