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CAS No. : | 914612-23-0 | MDL No. : | MFCD08273929 |
Formula : | C14H14ClN3 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | RPJAAZOTUXKSEV-UHFFFAOYSA-N |
M.W : | 259.73 | Pubchem ID : | 25324046 |
Synonyms : |
|
Num. heavy atoms : | 18 |
Num. arom. heavy atoms : | 12 |
Fraction Csp3 : | 0.29 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 0.0 |
Molar Refractivity : | 75.77 |
TPSA : | 29.02 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | Yes |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | Yes |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | Yes |
CYP3A4 inhibitor : | Yes |
Log Kp (skin permeation) : | -6.07 cm/s |
Log Po/w (iLOGP) : | 2.66 |
Log Po/w (XLOGP3) : | 2.56 |
Log Po/w (WLOGP) : | 2.0 |
Log Po/w (MLOGP) : | 2.07 |
Log Po/w (SILICOS-IT) : | 3.28 |
Consensus Log Po/w : | 2.52 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.42 |
Solubility : | 0.0977 mg/ml ; 0.000376 mol/l |
Class : | Soluble |
Log S (Ali) : | -2.82 |
Solubility : | 0.396 mg/ml ; 0.00152 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -5.36 |
Solubility : | 0.00113 mg/ml ; 0.00000437 mol/l |
Class : | Moderately soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 0.0 |
Synthetic accessibility : | 2.18 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
57.8% | Stage #1: With N,N-dimethyl-formamide; trichlorophosphate In acetonitrile at 70℃; for 1 h; Stage #2: With sodium hydrogencarbonate In dichloromethane; water at 0℃; |
6-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine A mixture of 6-benzyl-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(3H)-one (5.0 g, 0.02 mol), phosphoryl chloride (3.30 mL, 0.035 mol) and acetonitrile (80 mL) and DMF (catalytic amount) was heated to at 70° C. for 1 hour. The mixture was reduced in vacuo and the remaining black residue was taken up in dichloromethane (250 ml) and poured over ice. The mixture was carefully neutralized with the addition of solid sodium bicarbonate. The layers were separated and the organic dried over sodium sulfate and reduced in vacuo. The mixture was chromatographed using an ethyl acetate:hexanes (0-100percent) gradient on an isco flash chromatography system. The combined pure fractions were reduced in vacuo to yield the title compound as a yellow oil (3 g, 57.8percent). MS: M+H=260. 1H NMR (DMSO-d6): δ 8.80 (s, 1H). 7.40-7.24 (m, 5H), 3.76 (s, 2H), 3.57 (s, 2H), 2.92 (t, 2H), 2.80 (t, 2H). |
57.8% | Stage #1: With N,N-dimethyl-formamide; trichlorophosphate In acetonitrile at 70℃; for 1 h; Stage #2: With sodium hydrogencarbonate In dichloromethane; water at 0℃; |
Intermediate 26-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine A mixture of 6-benzyl-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(3H)-one (5.0 g, 0.02 mol), phosphoryl chloride (3.30 mL, 0.035 mol) and acetonitrile (80 mL) and DMF (catalytic amount) was heated at 70° C. for 1 hour. The mixture was concentrated in vacuo and the remaining black residue was taken up in dichloromethane (250 mL) and poured over ice. The mixture was carefully neutralized with the addition of solid sodium bicarbonate. The organic layer was separated and dried over sodium sulfate and concentrated in vacuo. The mixture was purified by silica gel column with EtOAc/hexane (0-100percent) to yield the title compound as a yellow oil (3 g, 57.8percent). LC-MS: 260 [M+1]+; 1H NMR (400 MHz, DMSO-d6): δ 8.80 (s, 1H), 7.40-7.24 (m, 5H), 3.76 (s, 2H), 3.57 (s, 2H), 2.92 (t, 2H), 2.80 (t, 2H). |
57.8% | Stage #1: With trichlorophosphate In acetonitrile at 70℃; for 1 h; Stage #2: With sodium hydrogencarbonate In dichloromethaneCooling with ice |
INTERMEDIATE 26-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido [4,3-d] pyrimidine[00274] A mixture of 6-benzyl-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(3H)-one (5.0 g,0.02 mol), phosphoryl chloride (3.30 mL, 0.035 mol) and acetonitrile (80 mL) and DMF (catalytic amount) was heated at 70 0C for 1 hour. The mixture was concentrated in vacuo and the remaining black residue was taken up in dichloroniethane (250 mL) and poured over ice. The mixture was carefully neutralized with the addition of solid sodium bicarbonate. The organic layer was separated and dried over sodium sulfate and concentrated in vacuo. The mixture was purified by silica gel column with EtOAc/hexane (0-100percent) to yield the title compound as a yellow oil (3 g, 57.8percent). MS: 260 [M+l]+; 1H NMR (400 MHz, DMSO-d6): 8.80 (s, IH), 7.40-7.24 (m, 5H), 3.76 (s, 2H), 3.57 (s, 2H), 2.92 (t, 2H), 2.80 (t, 2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Various N-substituted-6-(pyridin-2-yl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine derivatives are prepared using a general procedure described below. Accordingly, ethyl 1-benzyl-4-oxopiperidine-3-carboxylate hydrochloride is reacted with formamidine acetate to yield 6-benzyl-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(4aH)-one, which, in turn, is reacted with POCl3 to afford the 4-chloro derivative. The intermediate chloro derivative is then condensed with substituted aniline or amine to give the desired N-substituted-6-benzyl-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine. Debenzylation using standard procedures known in the art followed by nucleophilic displacement of an appropriate 2-halo-pyridine yields the appropriate N-substituted-6-(pyridin-2-yl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine. As a representative example, synthesis of N-(4-tert-butylphenyl)-6-(3-chloropyridin-2-yl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine is depicted in Scheme 1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | In acetonitrile; at 180℃; for 0.166667h;microwave irradiation; | 6-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine (Intermediate 2, 1.0 g, 3.86 mmol) was dissolved in anhydrous acetonitrile (3 mL) and aniline was added (0.39 mL, 4.24 mmol). The mixture was heated at 180 C. for 600 s in a microwave (Emrys Optimizer model, Personal Chemistry). The solvents were removed under vacuum to give the desired product as a beige powder (1.5 g, quant.). The crude product was used as such for the subsequent step. MS: M+H=317. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | In acetonitrile; at 200℃; for 0.166667h;microwave irradiation; | 6-Benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine (Intermediate 2, 0.25 g, 0.97 mmol) was dissolved in anhydrous acetonitrile (3 mL) and 4-fluorobenzenamine was added (0.10 mL, 1.06 mmol). The mixture was heated at 200 C. for 600 s in a microwave (Emrys Optimizer model, Personal Chemistry). The solvents were removed under vacuum to give the desired product as a beige powder (0.313 g, 97%.). MS: M+H=335 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | 6-Benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine (0.6 g, 2.3 mmol) was dissolved in anhydrous dioxane (2 mL) and 4-(trifluoromethyl)aniline was added (0.43 mL, 3.45 mmol), followed by HI/H2O (0.2 ml, 47%). The mixture was heated at 130 C. in a sealed tube for 10 min in a microwave (Smith creator model, Personal Chemistry). The solvents were removed under vacuum and the residue was dissolved in ethyl acetate and washed with sat. NaHCO3 and brine. The organic layer was dried over Na2SO4, filtered and evaporated to give the desired compound as a yellow solid (800 mg, 91%) which was used as such for the next step. M+H=385. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | 6-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine (0.5 g, 1.93 mmol) was dissolved in anhydrous dioxane (3 mL) and 6-trifluoromethylpyridin-3-ylamine was added (469 mg, 2.9 mmol), followed by HI/H2O (0.3 mL, 47%). The mixture was heated at 130 C. for 600 s in a Personal Chemistry microwave. The solvents were removed under vacuum and the residue was dissolved in ethyl acetate and washed with sat. NaHCO3 and brine. The organic layer was dried over Na2SO4, filtered and evaporated to give the product as an orange solid (700 mg, 95% crude). The crude product was used for the subsequent step. MS: M+H=386. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94.2% | In acetonitrile; at 180℃; for 0.166667h;microwave irradiation; | 6-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine (1.09 g, 4.21 mmol) prepared as described above (Intermediate 2, 1.0 g, 3.86mmol) was dissolved in anhydrous acetonitrile (3 mL) and 4-difluoromethoxyaniline was added (1.34 g, 8.42 mmol). The mixture was heated at 180 C. for 600 s in a microwave (Emrys Optimizer model, Personal Chemistry). The solvents were removed under vacuum to give the desired product as a beige powder (1.3 g, 94.2%). The crude product was used for the subsequent step. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | In methanol; for 2h;Heating / reflux; | Intermediate 34-Methoxy-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine A) 6-Benzyl-4-methoxy-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidineA 1 L flask was charged with <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine</strong> (39.6 g, 0.152 mol) and methanol (300 mL), and the mixture was heated to dissolve the chloropyrimidine. 4.37 M of sodium methoxide in methanol (105 mL) was added slowly to the warm mixture and the stirred mixture rapidly turned cloudy. The resultant suspension was heated under reflux for 2 h. After cooling, the mixture was concentrated in vacuo to ca 100 mL. The residue was poured into water (600 mL), and extracted with CH2Cl2 (200 mL×2). The combined organic layers were washed with brine (400 mL), dried (Na2SO4), filtered and concentrated in vacuo to yield a light brown oil (38.9 g, 100%).LC-MS: 256.1 M+H]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With N-ethyl-N,N-diisopropylamine; In acetonitrile; at 200℃; for 3.5h;Microwave irradiation; | A) 6-Benzyl-N-((6-(trifluoromethyl)pyridin-3-yl)methyl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amineTwo 20 mL microwave vials were each charged with a half portion of <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine</strong> (5.62 g, 21.6 mmol), (6-(trifluoromethyl)pyridin-3-yl)methanamine (5.0 g, 28 mmol), N,N-diisopropylethylamine (7.6 mL, 44 mmol) and acetonitrile (10 mL), and the mixture was subjected to a microwave irradiation at 200 C. for 3.5 h. LC-MS analysis showed the reaction was complete for both samples. The samples were combined, and partitioned between CH2Cl2 (150 mL) and 0.5M NaH2PO4 (pH 4; 120 mL). The organic layer was extracted with 2M HCl (60 mL, 30 mL). The combined acid extracts were basified with 50% KOH (25 mL), extracted with CH2Cl2 (2×100 mL), dried (Na2SO4), filtered and concentrated to yield a light brown oil, which was absorbed on silica (40 g) and purified by column (120 g silica gel, 0-7.5% MeOH/CH2Cl2) to afford a light yellow foam (7.42 g, 86%).LC-MS: 400.4 [M+H]+ 1H NMR (400 MHz, CDCl3): delta 8.67 (d, 1H, J=1.8 Hz), 8.45 (s, 1H), 7.83 (dd, 1H, J=8.0, 1.8 Hz), 7.62 (d, 1H, J=7.9 Hz), 7.39-7.27 (m, 5H), 4.79 (s, 2H), 3.77 (s, 2H), 3.31 (s, 2H), 2.90-2.80 (m, 4H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | With N-ethyl-N,N-diisopropylamine; In acetonitrile; at 180℃; for 2h;Microwave irradiation; | Method J (Compound 13)5-Chloro-2-(4-((6-methoxypyridin-3-yl)methylamino)-7,8-dihydropyrido[4,3-d]pyrimidin-6(5H)-yl)benzonitrile A) 6-Benzyl-N-((6-chloropyridin-3-yl)methyl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amineA mixture of <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine</strong> (2.5 g, 9.6 mmol), 2-chloro-5-aminomethylpyridine (2.7 g, 19 mmol), acetonitrile (10 mL), and N,N-diisopropylethylamine (3.4 mL, 19 mmol) was subjected to microwave irradiation at 180 C. for 2 h. After standing at rt overnight, the precipitated solids were collected by filtration and washed with cold acetonitrile (5 mL×2), and dried to yield a yellow powder (2.8 g, 77%).LC-MS: 366.3 [M+H]+ 1H NMR (400 MHz, d6-DMSO): delta 8.34 (d, 1H, J=2.8 Hz), 8.23 (s, 1H), 7.74 (dd, 1H, J=8.4, 2.8 Hz), 7.45-7.25 (m, 7H), 4.56 (d, 2H, J=6.0 Hz), 3.72 (s, 2H), 3.36 (s, 2H), 2.72-2.62 (m, 4H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
75% | With N-ethyl-N,N-diisopropylamine; In acetonitrile; at 200℃; for 3.5h;Microwave irradiation; | A) (R)-6-Benzyl-N-(1-(6-(trifluoromethyl)pyridin-3-yl)ethyl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine6-Benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine (5.00 g, 19.2 mmol), (R)-1-(6-(trifluoromethyl)pyridin-3-yl)ethanamine (4.76 g, 25.0 mmol), N,N-diisopropylethylamine (6.71 mL, 38.5 mmol), and acetonitrile (15 mL) were divided evenly between two 20 mL microwave vials. The reactions were subjected to microwave irradiation at 200 C. for 3.5 h. The two reactions were mixed together and evaporated the acetonitrile off. The residue was redissolved in CH2Cl2 (150 mL) and washed with 1M NaH2PO4 (2×50 mL). The product was extracted with 1M HCl (2×50 mL). The aqueous extracts were basified to pH 14 and extracted with CH2Cl2 (2×50 mL). The combined organic layers were dried with Na2SO4, filtered and evaporated to produce a yellow to orange solid (7.21 g). The crude product was washed with ether (25 mL) by stirring the solids for about 30 minutes. The solids were filtered from the ether and washed with ether (2×5 mL) to obtain a pale yellow powder (3.55 g, 45% yield). The ether filtrate was absorbed onto silica and purified by column with MeOH/CH2Cl2 (0-10%) to yield more product (2.38 g, 30% yield; 75% combined yield).LC-MS: 414.5 [M+H]+ 1H NMR (400 MHz, CDCl3): delta 8.72 (d, 1H, J=1.6 Hz), 8.37 (s, 1H), 7.80 (dd, 1H, J=8.4, 1.6 Hz), 7.62 (d, 1H, J=8.0 Hz), 7.42-7.28 (m, 5H), 5.47 (m, 1H), 4.43 (d, 1H, J=6.4 Hz), 3.79 and 3.75 (AB, 2H, J=13.2 Hz), 3.37 (t, 2H, J=14.8 Hz), 2.88-2.76 (m, 4H), 1.62 (d, 3H, J=6.8 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine; In ethanol; for 4h;Reflux; | Step B:To the solution of compound 2 (5.4g, 20.8mmol) and ethyl isonipecotate (3.92 g. 24.95 mmol) in 100 mL of ethanol was added DIEA (4.02g, 31.2mmol) and the mixture was heated to reflux for 4 hours. TLC (DCM: MeOH=15: 1) indicated that the reaction completed. The reaction mixture was then concentrated and purified by chromatography over silica gel to give compound 3 as pale brown solid (7.2 g) MS (ESEI): 381.4 [M+l]+ | |
With N-ethyl-N,N-diisopropylamine; In ethanol; for 4h;Reflux; | To the solution of compound 2 (5.4g, 20.8mmol) and ethyl isonipecotate (3.92 g, 24.95 mmol) in 100 mL of ethanol was added DIEA (4.02g, 3 i.2mmol) and the mixture was heated to reflux for 4 hours. TLC (DCM: MeOH=T5: 1) indicated that the reaction completed. The reaction mixture was then concentrated and purified by chromatography over silica gel to give compound 3 as pale brown solid (7.2 g) MS (ESEI): 381.4 [M+l]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine; In ethanol; at 80℃; for 3h; | Step ETo a solution of <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (3.9 g, 15.0 mmol) in EtOH (50 mL) was added compound 5 (2.3 g, 15.0 mmol) and DIEA (3.87 g, 30 mmol). The mixture was stirred at 80 C for 3 hours then the mixture was evaporated to dryness. The crude product was purified by silica gel chromatography eluted with PE: EA = (5: 1) to give the desired product (4.08 g) | |
With N-ethyl-N,N-diisopropylamine; In ethanol; at 80℃; for 3h; | To a solution of 6-benzyl-4-chloro-5,6,7,8-tetraliydro-pyrido[4,3-d]pyrimidine (3.9 g, 15.0 mmol) in EtOH (50 mL) was added compound 5 (2.3 g, 15.0 mmol) and D3EA (3.87 g, 30 mmol). The mixture was stirred at 80 C for 3 hours then the mixture was evaporated to dryness. The crude product was purified by silica gel chromatography eluted with PE: EA = (5:1) to give the desired product (4.08 g) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
3-( 6-Benzyl-5, 6, 7, 8-tetrahydro-pyrido[4, 3-d]pyrimidin-4-yloxy)-azetidine-1-carboxylic acid tert-butyl ester; 3-Hydroxy-azetidine-1-carboxylic acid tert-butyl ester (217 mg, 1.25 mmol) was dissolved under argon in THF (10 ml.) and NaH (58 mg, 1 .44 mmol) was added. The resulting suspension was stirred at rt under argon for 15 min following by the addtion of a solution of 6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3d]pyrimidine (250 mg, 0.963 mmol). The reaction mixture was stirred at rt for 18h, quenched with water (20 ml.) and diluted withCH2CI2. The organic layer was filtered through a phase separation tube and concentrated in vacuo. Purification by flash chromatography on silica gel with heptane / CH2CI2, 50/50 to 0/100 then EtOAc to give 3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)- azetidine-1 -carboxylic acid tert-butyl ester as a yellow gum (425 mg, 1 1 1 % yield) LCMS: [M+H]+= 397.4, Rt (4)= 0.98 min. | ||
3-Hydroxy-azetidine-1 -carboxylic acid tert-butyl ester (217 mg, 1.25 mmol) was dissolved under argon in THF (10 ml_) and NaH (58 mg, 1.44 mmol) was added. The resulting suspension was stirred at rt under argon for 15 min following by the addtion of a solution of 6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3d]pyrimidine (250 mg, 0.963 mmol). The reaction mixture was stirred at rt for 18h, quenched with water (20 ml_) and diluted withCH2CI2. The organic layer was filtered through a phase separation tube and concentrated in vacuo. Purification by flash chromatography on silica gel with heptane / CH2CI2, 50/50 to 0/100 then EtOAc to give 3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-azetidine-1 -carboxylic acid tert-butyl ester as a yellow gum (425 mg, 1 11 % yield) LCMS: [M+H]+= 397.4, Rt (4)= 0.98 min. | ||
3-(6-Benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-azetidine-1-carboxylic acid tert-butyl ester 3-Hydroxy-azetidine-1-carboxylic acid tert-butyl ester (217 mg, 1.25 mmol) was dissolved under argon in THF (10 mL) and NaH (58 mg, 1.44 mmol) was added. The resulting suspension was stirred at rt under argon for 15 min following by the addition of a solution of 6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3d]pyrimidine (250 mg, 0.963 mmol). The reaction mixture was stirred at rt for 18 h, quenched with water (20 mL) and diluted with CH2Cl2. The organic layer was filtered through a phase separation tube and concentrated in vacuo. Purification by flash chromatography on silica gel with heptane/CH2Cl2, 50/50 to 0/100 then EtOAc to give 3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-azetidine-1-carboxylic acid tert-butyl ester as a yellow gum (425 mg, 111% yield) LCMS: [M+H]+=397.4, Rt(4)=0.98 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With potassium carbonate; In 1-methyl-pyrrolidin-2-one; at 120℃; for 20h; | Alternative synthesis for intermediate 22: (S)-tert-Butyl-3-aminopyrrolidine-1 -carboxylate (50 g, 192.5 mmol) was added to 6-benzyl-4- chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine (39.440 g, 21 1.8 mmol) in NMP (200 mL) solution followed by the addition of K2C03 (39.9 g, 288.8 mmol). The mixture was heated to 120C for 20h. The mixture was allowed to cool, partitioned between water (300 mL) and ethylacetate (500 mL). the bottom aqueous phase was discarded and the upper organic phase was washed with brine (150 mL) and concentrated in vacuo to provide crude (S)-3-(6- benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)-pyrrolidine-1-carboxylic acid tert- butyl ester as a pale yellow foam (76.44 g, 97% yield). |
97% | With potassium carbonate; In 1-methyl-pyrrolidin-2-one; at 120℃; for 20h;Sealed tube; | Intermediate 22: (S)-3-(6-Benzyl-5,6J,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)-pyrrolidine-1-carboxylic acid tert-butyl ester6-Benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine (5.0 g, 19.06 mmol), (S)-tert-butyl 3-aminopyrrolidine-1-carboxylate (4.1 1 g, 20.96 g) and triethylamine (3.98 mL, 28.6 mmol) were heated in a sealed vial at 120C for 42h. The mixture was allowed to cool, diluted with tert-butyl methyl ether (100 mL) and the resulting suspension stirred for 10 min. The mixture was diluted with water (50 mL) and the organic layer separated. The organic layer was washed with brine (20 mL), dried (Na2S04) and evaporated in vacuo to give a brown gum. The residue was purified by column chromatography on silica gel with EtOAc / MeOH, 98/2 to 82/18 to give (S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)-pyrrolidine-1 -carboxylic acid tert-butyl ester as a pale yellow foam (7.36 g, 93% yield). 1 H-NMR (400 MHz, CDCI3, 298 K): delta ppm 1.48 (s, 9H) 2.10-2.31 (m, 2H) 2.80-2.96 (m, 4H) 3.15-3.87 (m, 8H) 4.44-4.77 (m, 1 H) 5.62-5.73 (m, 1 H) 7.29-7.45 (m, 5H) 8.50 (s, 1 H). LCMS: [M+H]+=410.0, Rt (6)= 1.39 min. Alternative synthesis for intermediate 22: (S)-tert-Butyl-3-aminopyrrolidine-1 -carboxylate (50 g, 192.5 mmol) was added to <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (39.440 g, 21 1.8 mmol) in NMP (200 mL) solution followed by the addition of K2C03 (39.9 g, 288.8 mmol). The mixture was heated to 120C for 20h. The mixture was allowed to cool, partitioned between water (300 mL) and ethylacetate (500 mL). the bottom aqueous phase was discarded and the upper organic phase was washed with brine (150 mL) and concentrated in vacuo to provide crude (S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)-pyrrolidine-1 -carboxylic acid tert-butyl ester as a pale yellow foam (76.44 g, 97% yield). |
97% | With potassium carbonate; In 1-methyl-pyrrolidin-2-one; at 120℃; for 20h; | Alternative synthesis for intermediate 22 (S)-tert-Butyl-3-aminopyrrolidine-1-carboxylate (50 g, 192.5 mmol) was added to <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (39.440 g, 211.8 mmol) in NMP (200 mL) solution followed by the addition of K2CO3 (39.9 g, 288.8 mmol). The mixture was heated to 120 C. for 20 h. The mixture was allowed to cool, partitioned between water (300 mL) and ethylacetate (500 mL). the bottom aqueous phase was discarded and the upper organic phase was washed with brine (150 mL) and concentrated in vacuo to provide crude (S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)-pyrrolidine-1-carboxylic acid tert-butyl ester as a pale yellow foam (76.44 g, 97% yield). |
93% | With triethylamine; at 120℃; for 42h;Sealed vial;Mechanism; | Intermediate 22: (S)-3-(6-Benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-ylamino)- pyrrolidine-1 -carboxylic acid tert-butyl ester; 6-Benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine (5.0 g, 19.06 mmol), (S)-tert- butyl 3-aminopyrrolidine-1 -carboxylate (4.1 1 g, 20.96 g) and triethylamine (3.98 mL, 28.6 mmol) were heated in a sealed vial at 120C for 42h. The mixture was allowed to cool, diluted with tert-butyl methyl ether (100 mL) and the resulting suspension stirred for 10 min. The mixture was diluted with water (50 mL) and the organic layer separated. The organic layer was washed with brine (20 mL), dried (Na2S04) and evaporated in vacuo to give a brown gum. The residue was purified by column chromatography on silica gel with EtOAc / MeOH, 98/2 to 82/18 to give (S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4- ylamino)-pyrrolidine-1-carboxylic acid tert-butyl ester as a pale yellow foam (7.36 g, 93% yield). 1H-NMR (400 MHz, CDCI3, 298 K): delta ppm 1.48 (s, 9H) 2.10-2.31 (m, 2H) 2.80-2.96 (m, 4H) 3.15-3.87 (m, 8H) 4.44-4.77 (m, 1 H) 5.62-5.73 (m, 1 H) 7.29-7.45 (m, 5H) 8.50 (s, 1 H). LCMS: [M+H]+=410.0, Rt (6)= 1 .39 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | With potassium tert-butylate; In 2-methyltetrahydrofuran; at 20℃; for 0.416667h;Inert atmosphere;Product distribution / selectivity; | Alternative synthesis for (S)-3-(6-Benzyl-5,6, 7,8-tetrahvdro-Dyrido[4,3-dlDyrimidin-4-yloxy)- Dyrrolidine-1 -carboxylic acid tert-butyl ester; To a solution of (S)-3-hydroxypyrrolidine-1 - carboxylic acid tert-butyl ester (6.21 g, 33.16 mmol) and <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (9 g, 34.65 mmol) in 2-Me-THF (100 ml.) was added under nitrogen tBuOK (8.17 g, 72.95 mmol). The mixture was stirred at rt for 25 min. The mixture was quenched with H20. The organic layer was washed with brine. The resulting organic solution was concentrated in vacuo to provide (S)- 3-(6-benzyl-5, 6, 7, 8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidine-1 -carboxylic acid tert-butyl ester (12.6 g, 89% yield) as a yellow gum. |
89% | With potassium tert-butylate; In 2-methyltetrahydrofuran; at 20℃; for 0.416667h;Inert atmosphere; | Alternative synthesis for (S)-3-(6-Benzyl-5,6, 7,8-tetrahvdro-Dyridof4,3-dlDyrimidin-4-yloxy)- pyrrolidine-1-carboxylic acid tert-butyl esterTo a solution of (S)-3-hydroxypyrrolidine-1- carboxylic acid tert-butyl ester (6.21 g, 33.16 mmol) and <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (9 g, 34.65 mmol) in 2-Me-THF (100 ml.) was added under nitrogen tBuOK (8.17 g, 72.95 mmol). The mixture was stirred at rt for 25 min. The mixture was quenched with H20. The organic layer was washed with brine. The resulting organic solution was concentrated in vacuo to provide (S)- 3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidine-1 -carboxylic acid tert-butyl ester (12.6 g, 89% yield) as a yellow gum. |
89% | With potassium tert-butylate; In 2-methyltetrahydrofuran; at 20℃; for 0.416667h;Inert atmosphere; | To a solution of (S)-3-hydroxypyrrolidine-1 - carboxylic acid tert-butyl ester (6.21 g, 33.16 mmol) and <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (9 g, 34.65 mmol) in 2-Me-THF (100 mL) was added under nitrogen tBuOK (8.17 g, 72.95 mmol). The mixture was stirred at rt for 25 min. The mixture was quenched with H20. The organic layer was washed with brine. The resulting organic solution was concentrated in vacuo to provide (S)-3-(6-benzyl-5, 6, 7, 8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidine-1 -carboxylic acid tert-butyl ester (12.6 g, 89% yield) as a yellow gum. |
89% | With potassium tert-butylate; In 2-methyltetrahydrofuran; at 20℃; for 0.416667h;Inert atmosphere; | Alternative synthesis for (S)-3-(6-Benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidine-1-carboxylic acid tert-butyl ester To a solution of (S)-3-hydroxypyrrolidine-1-carboxylic acid tert-butyl ester (6.21 g, 33.16 mmol) and <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (9 g, 34.65 mmol) in 2-Me-THF (100 mL) was added under nitrogen tBuOK (8.17 g, 72.95 mmol). The mixture was stirred at rt for 25 min. The mixture was quenched with H2O. The organic layer was washed with brine. The resulting organic solution was concentrated in vacuo to provide (S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidine-1-carboxylic acid tert-butyl ester (12.6 g, 89% yield) as a yellow gum. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | 1-[(S)-3-(6-Benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidin-1-yl]-propan-1-one Step 1 To a solution of 1-((S)-3-hydroxy-pyrrolidin-1-yl)-propan-1-one (intermediate 2) (358 mg, 2.503 mmol) in 5 mL of THF was added NaH (108 mg, 2.70 mmol) under Ar. The mixture was stirred at rt for 15 min, then <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (500 mg, 1.925 mmol) and 5 mL of THF were added and stirred at rt for 5 h. The reaction was quenched with H2O and extracted with ethylacetate, the org. layer was washed with brine, dried over MgSO4, filtered and evaporated to dryness. The residue was purified by flash-chromatography using Isco Companion system (12 g of SiO2) CH2Cl2/MeOH (95/5). The collected fractions were combined, evaporated and dried over high vacuum to give 1-[(S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidin-1-yl]-propan-1-one. (m=560 mg, yield 78%) MS: [M+H]+=367.6, Rt(7)=0.64 min. | |
1-[(S)-3-(6-Benzyl-5fi ,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidinone; Step 1; To a solution of 1 -((S)-3-hydroxy-pyrrolidin-1-yl)-propan-1-one (intermediate 2) (358 mg,2.503 mmol) in 5ml_ of THF was added NaH (108 mg, 2.70 mmol) under Ar. The mixture was stirred at rt for 15min, then <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (500 mg, 1.925 mmol) and 5 ml. of THF were added and stirred at rt for 5h. The reaction was quenched with H20 and extracted with ethylacetate, the org. layer was washed with brine, dried over MgS04, filtered and evaporated to dryness. The residue was purified by flash- chromatography using Isco Companion system (12g of Si02) CH2CI2 /MeOH(95/5). The collected fractions were combined, evaporated and dried over high vacuum to give 1-[(S)-3- (6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidin-1 -yl]-propan-1-one. (m= 560 mg, yield 78%) MS: [M+H]+= 367.6, Rt(7) = 0.64 min. | ||
Step 1 To a solution of 1-((S)-3-hydroxy-pyrrolidin-1 -yl)-propan-1-one (intermediate 2) (358 mg,2.503 mmol) in 5mL of THF was added NaH (108 mg, 2.70 mmol) under Ar. The mixture was stirred at rt for 15min, then <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidine</strong> (500 mg, 1 .925 mmol) and 5 ml_ of THF were added and stirred at rt for 5h. The reaction was quenched with H20 and extracted with ethylacetate, the org. layer was washed with brine, dried over MgS04, filtered and evaporated to dryness. The residue was purified by flash-chromatography using Isco Companion system (12g of S1O2) CH2CI2 /MeOH(95/5). The collected fractions were combined, evaporated and dried over high vacuum to give 1-[(S)-3-(6-benzyl-5,6,7,8-tetrahydro-pyrido[4,3-d]pyrimidin-4-yloxy)-pyrrolidin-1-yl]-propan-1 -one. (m= 560 mg, yield 78%) MS: [M+H]+= 367.6, Rt(7) = 0.64 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | for 2h;Reflux; | A) 6-Benzyl-4-methoxy-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine[00278] A l L flask was charged with 6-benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3- d]pyrimidine (39.6 g, 0.152 mol) and methanol (300 mL), and the mixture was heated to dissolve the chloropyrimidine. 4.37 M of sodium methoxide in methanol (105 mL) was added slowly to the warm mixture and the stirred mixture rapidly turned cloudy. The resultant suspension was heated under reflux for 2h. After cooling, the mixture was concentrated in vacuo to ca 100 mL. The residue was poured into water (600 mL), and extracted with CH2Cl2 (200 mL x 2). The combined organic layers were washed with brine (400 mL), dried (Na2SO^, filtered and concentrated in vacuo to a light brown oil (38.9 g, 100%). MS: 256.1 [M+l]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine; In acetonitrile; at 200℃; for 2.5h;Microwave irradiation; | ) (R)-6-Benzyl-N-(l-(4-chlorophenyl)ethyl)-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-amine [00314] Two 20 mL microwave vials were charged with a half portion of <strong>[914612-23-0]6-benzyl-4-chloro-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidine</strong> (3.50 g, 13.5 mmol), (R)-I -(4-chloro-phenyl)-ethylamine (4.20 g, 27.0 mmol), NN-diisopropylethylamine (4.7 mL, 27 mmol) and acetonitrile (20 mL); and the mixture was heated in a micrwave at 200 0C for 2.5 h. The mixture was concentrated in vacuo, and the residue was taken up in CH2Cl2 (100 mL) and ethyl acetate (20 mL), washed with 0.5 M aq. NaH2PO4 (pH 4, 100 mL), dried (Na2SO4), and concentrated. The residue was purified on silica gel column (0-5% MeOH/CH2Cl2) to give a pale yellow foam (4.46 g). LC-MS:, 379.5 [M+H]+;1H NMR (400 MHz, CDCl3): 8.41 (s, IH), 7.40-7.24 (m, 9H), 5.40 (p, IH, J= 7.0 Hz), 4.38 (d, IH, J = 7.2 Hz), 3.78 and 3.73 (AB, 2H, J= 13.2 Hz), 3.36 and 3.32 (AB, 2H, J = 14.8 Hz), 2.85-2.75 (m, 4H), 1.54 (d, 3H, J= 6.9 Hz). |
Tags: 914612-23-0 synthesis path| 914612-23-0 SDS| 914612-23-0 COA| 914612-23-0 purity| 914612-23-0 application| 914612-23-0 NMR| 914612-23-0 COA| 914612-23-0 structure
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H202 | Explosive; severe projection hazard |
H203 | Explosive; fire, blast or projection hazard |
H204 | Fire or projection hazard |
H205 | May mass explode in fire |
H220 | Extremely flammable gas |
H221 | Flammable gas |
H222 | Extremely flammable aerosol |
H223 | Flammable aerosol |
H224 | Extremely flammable liquid and vapour |
H225 | Highly flammable liquid and vapour |
H226 | Flammable liquid and vapour |
H227 | Combustible liquid |
H228 | Flammable solid |
H229 | Pressurized container: may burst if heated |
H230 | May react explosively even in the absence of air |
H231 | May react explosively even in the absence of air at elevated pressure and/or temperature |
H240 | Heating may cause an explosion |
H241 | Heating may cause a fire or explosion |
H242 | Heating may cause a fire |
H250 | Catches fire spontaneously if exposed to air |
H251 | Self-heating; may catch fire |
H252 | Self-heating in large quantities; may catch fire |
H260 | In contact with water releases flammable gases which may ignite spontaneously |
H261 | In contact with water releases flammable gas |
H270 | May cause or intensify fire; oxidizer |
H271 | May cause fire or explosion; strong oxidizer |
H272 | May intensify fire; oxidizer |
H280 | Contains gas under pressure; may explode if heated |
H281 | Contains refrigerated gas; may cause cryogenic burns or injury |
H290 | May be corrosive to metals |
Health hazards | |
Code | Phrase |
H300 | Fatal if swallowed |
H301 | Toxic if swallowed |
H302 | Harmful if swallowed |
H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
Sorry,this product has been discontinued.
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