Structure of 1047644-76-7
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CAS No. : | 1047644-76-7 |
Formula : | C11H19BN2O2 |
M.W : | 222.09 |
SMILES Code : | CC1(C)C(C)(C)OB(C2=C(C)C=NN2C)O1 |
MDL No. : | MFCD12400853 |
InChI Key : | NOZSCXDKBYFTBH-UHFFFAOYSA-N |
Pubchem ID : | 57826676 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 16 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.73 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 64.93 |
TPSA ? Topological Polar Surface Area: Calculated from |
36.28 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.0 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.62 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.03 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.59 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.76 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.8 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.4 |
Solubility | 0.878 mg/ml ; 0.00396 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.99 |
Solubility | 2.25 mg/ml ; 0.0101 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.79 |
Solubility | 0.359 mg/ml ; 0.00162 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
Yes |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.5 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
3.17 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a suspension of NaH (60% in mineral oil, 3.5 g, 146 mmol, washed with 200 mL of hexane) in THF (200 mL) was added 4-methyl-1 H-pyrazole (10 g, 122 mmol) at 0 0C dropwise. After stirring at RT for 1 h, to above suspension was added MeI (7.3 mL, 117 mmol) dropwise at 0 0C. The reaction mixture was stirred overnight. The NaI by-product was removed by filtration and the filtrate solution was used directly in the next step.At 00C, to above THF solution of 1 ,4-dimethyl pyrazole was added n-BuLi (2.5M in hexane, 58.5 mL, 146 mmole). The reaction solution was stirred for 2 hour at RT and then cooled to -78C [J. Heterocyclic Chem. 41 , 931 (2004)]. To the reaction solution was added 2-isopropoxy-4,4,5,5-tetramethyl-1 ,3,2-dioxaborolane (27.2 g, 146 mmole). After 15 min at -78C, the reaction was allowed to warm to 00C and stir for 3h. The reaction was diluted with saturated NH4CI solution and extracted with DCM. The organics were dried over Na2SO4 and concentrated under vacuum to afford the title compound as a brown solid (21 g, 78%) which was used directly without further purification: LC-MS: 141 (M-C6H12)"1", 223 (M+H)+. 1H NMR (CDCI3): delta 7.28 (s, 1 H), 4.03 (s, 3H), 2.22 (s, 3H), and 1.32 (s, 12H). | ||
142 mg | 1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole A solution of 1,4-dimethyl-1H-pyrazole (480.0 mg, 4.993 mol) in tetrahydrofuran (20 mL, 300 mmol) at 0 C. was added 1.6 M n-butyllithium in hexane (4.7 mL, 7.5 mmol). The solution was stirred at room temperature for 1 h and then cooled to -78 C. To the solution was added 2-isopropoxy-4,4,5,5-tetramethyl-1,3,2-dioxaborolane (1.63 mL, 7.99 mmol). The reaction mixture was stirred at -78 C. for 0.5 h, then warmed up to 0 C. (taking 0.5 h). The reaction was quenched with brine and extracted with EtOAc (3*). The combined organic phases were washed with brine, dried over Na2SO4, and concentrated under reduced pressure. The residue was purified by combi-flash chromatography and eluted with EtOAc/hexane (0-60%). The purification gave 142 mg of product as white solid. | |
Step 1. 1, 4-Dimethyl-5-( 4, 4, 5, 5-tetrame orolan-2-yl)-lH-pyrazole l,4-Dimethyl-7H-pyrazole (50 mg, 0.5 mmol) was stirred in THF (2 mL) and cooled to 0 C. A solution of 1.6 M w-butyllithium in hexanes (390 mL) was added dropwise by syringe and the mixture was allowed to warm to room temperature for 2 h. The mixture was cooled to -78 C and 2-isopropoxy-4,4,5,5-tetramethyl-l,3,2-dioxaborolane(110 mL, 0.52 mmol) was added dropwise by syringe. The mixture was stirred at -78 C for 15 min. and at 0 C for 3 h. The mixture was diluted with EtOAc and washed with brine, dried over sodium sulfate, filtered and concentrated under reduced pressure. Purification by chromatography on silica gel using EtOAc in hexanes gave the sub-title compound. LCMS calc. for CnH2oB 202 (M+H)+: m/z = 223.2; found: 223.0. |
With n-butyllithium; | Step 1 To a solution of 1,4-dimethyl-1H-pyrazole (2.5 g, 26.0 mmol, 1 equiv) in tetrahydrofuran (50 mL) was added n-butyllithium in hexane solution (2.5 M in hexane, 78.0 mmol, 31 mL, 3 equiv) dropwise at 0 C. under nitrogen atmosphere. The resulting solution was stirred at room temperature for 1 h and then cooled to -78 C. 2-isopropoxy-4,4,5,5-tetramethyl-1,3,2-dioxaborolane (14.52 g, 78.017 mmol, 3 equiv) was added and the reaction mixture was stirred at -78 C. for 0.5 hour, then slowly warmed up to 0 C. The reaction was quenched with brine and extracted with EtOAc (250 mL*3). The combined organic layer was washed with brine, dried over Na2SO4 and concentrated under reduced pressure. The residue was applied onto a silica gel column eluting with ethyl acetate/petroleum ether (1:5). This resulted in 2.6 g (45%) of 1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
73.4% | With sodium carbonate;(1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; In tetrahydrofuran; at 75℃; for 8h; | To a solution of 4-bromo-5-chloro-lambda/-((1 S)-2-(1 ,3-dioxo-1 ,3-dihydro-2/-/- isoindol-2-yl)-1-[2-(trifluoromethyl)phenyl]methyl}ethyl)-2-thiophenecarboxamide (260 mg, 0.46 mmol) in THF (5 ml.) was added Na2CO3 (2N, 0.7 ml_, 1.4 mmol), Pd(dppf)CI2 (40 mg, 48 mumol) and 1 ,4-dimethyl-5-(4,4,5,5-tetramethyl-1 ,3,2- dioxaborolan-2-yl)-1 H-pyrazole (303 mg, 1.38 mmol). The reaction mixture was heated to 75 0C in a sealed tube under N2. After 8h, the reaction mixture was concentrated under vacuum and purified on silica (10:1 CHCI3/MeOH) to afford the title compound (196 mg, 73.4percent): LC-MS (ES) m/z = 587 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | With potassium carbonate;tetrakis(triphenylphosphine) palladium(0); In 1,4-dioxane; water; at 80℃; for 2h; | To a solution of 4-bromo-lambda/-((1 S)-2-(1 ,3-dioxo-1 ,3-dihydro-2H-isoindol-2-yl)- 1-[2-(trifluoromethyl)phenyl]methyl}ethyl)-2-thiophenecarboxamide (200 mg, 0.37 mmol) in dioxane/H2O (5:1 , 6 ml.) was added K2CO3 (0.17g, 1.23 mmol), tetrakistriphenylphosphine Pd(O) (42 mg, 0.036mmol) and 1 ,4-dimethyl-5-(4,4,5,5- tetramethyl-1 ,3,2-dioxaborolan-2-yl)-1 H-pyrazole (413 mg, 1.86 mmol) [from Preparation 17] . The reaction mixture was heated to 80° C in a sealed tube for 2h. The reaction solution was concentrated under vacuum, and purified on silica gel (10-50percent EtOAc/Hex) to give the title compound (192 mg, 94percent) as a white solid: LC-MS (ES) m/z 553 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
48% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium carbonate; In 1,4-dioxane; water; at 20 - 120℃; for 1h; | Step 2. Synthesis of 4-[4-(1,4-dimethyl-1H-pyrazol-5-yl)-3-methylphenoxy]-1-[2-(trimethylsilyl)ethoxy]methyl}-1H-pyrrolo[3,2-c]pyridine (C16) To a mixture of C15 (100 mg, 0.231 mmol), 1,4-dioxane (2 mL) and water (0.5 mL) was added <strong>[1047644-76-7]1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (56 mg, 0.25 mmol), [1,1'-bis(diphenylphosphino)ferrocene]dichloropalladium(II) (25.6 mg, 0.0350 mmol) and potassium carbonate (97 mg, 0.70 mmol) at room temperature. The reaction mixture was stirred at 120° C. for 1 hour; after cooling to room temperature, the mixture was filtered and the filtrate was concentrated in vacuo. Purification via preparative thin layer chromatography on silica gel (Eluent: 1:1 petroleum ether/ethyl acetate) provided the product as a red oil. Yield: 51 mg, 0.11 mmol, 48percent. 1H NMR (400 MHz, CD3OD) delta 7.80 (d, J=6.0 Hz, 1H), 7.43 (d, J=3.3 Hz, 1H), 7.37-7.40 (m, 2H), 7.21 (d, J=8.3 Hz, 1H), 7.16 (br d, J=2.0 Hz, 1H), 7.08 (br dd, J=8.3, 2.5 Hz, 1H), 6.61 (d, J=3.3 Hz, 1H), 5.60 (s, 2H), 3.61 (s, 3H), 3.51-3.57 (m, 2H), 2.09 (s, 3H), 1.91 (s, 3H), 0.85-0.91 (m, 2H), -0.06 (s, 9H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
19% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In 1,4-dioxane; at 100℃; for 2h;Inert atmosphere; Microwave irradiation; | A suspension of 7-bromo-4-[(4,6-dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-methyl-3,4-dihydro-1,4-benzoxazepin-5(2H)-one (126d, 36 mg), <strong>[1047644-76-7]1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (34 mg, 0.092 mmol), and sodium carbonate (2M aq, 32 mg, 0.30 mmol) in 1,4-dioxane (3 mL) was degassed with N2 for 10 minutes. The reaction mixture was treated with PdCl2(DPPF)-DCM (8.2 mg, 0.010 mmol) and heated at 100° C. in the microwave for 1 hour, then at 120° C. in the microwave for an additional 1 hour. The reaction mixture was poured into DCM (25 mL) and washed with water (3*25 mL). The organic layer was concentrated under vacuum and the residue was purified by preparative HPLC to give the title compound (Example 126, 7 mg, 19percent yield) as a white solid. 1H NMR (400 MHz, DMSO-d6) delta 7.33 (s, 1H), 7.23 (d, J=8.07 Hz, 1H), 6.99 (d, J=8.19 Hz, 1H), 5.93 (s, 1H), 4.66 (s, 2H), 4.09 (t, J=5.44 Hz, 2H), 3.48 (s, 3H), 3.42-3.46 (m, 2H), 2.23 (s, 3H), 2.14 (s, 3H), 2.03 (s, 3H), 1.79 (s, 3H); MS 407.1 [M+1]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium phosphate; chloro(2-dicyclohexylphosphino-2?,4?,6?-triisopropyl-1,1?-biphenyl)[2-(2?-amino-1,1?-biphenyl?)]palladium(II); In 1,4-dioxane; water; at 90℃; for 2h;Inert atmosphere; | Step 2. 7-(l, 4-dimethyl-lH-pyrazol-5-yl)-4-pyridin-2-yl-4, 5-dihydroimidazo[ 1, 5, 4- dejf 1 ,4] benzoxazin-2( lH)-one 7-Bromo-4-pyridin-2-y 1-4,5 -dihydroimidazo [ 1 ,5 ,4-de] [ 1 ,4]benzoxazin-2( 1 H)-one (28 mg, 0.084 mmol) was dissolved in 1, 4-dioxane (0.67 mL). l,4-Dimethyl-5-(4,4,5,5- tetramethyl-l,3,2-dioxaborolan-2-yl)-lH-pyrazole (28 mg, 0.13 mmol) and potassium phosphate (40 mg, 0.2 mmol) in water (0.17 mL) was added. The reaction mixture was deoxygenated with nitrogen. Dicyclohexyl(2',4',6'-triisopropylbiphenyl-2-yl)phosphine-(2'- aminobiphenyl-2-yl)(chloro)palladium (1 : 1) (2 mg, 0.002 mmol) was added and the mixture was again deoxygenated with nitrogen. The reaction mixture was then stirred at 90 °C under nitrogen for 2 h. Product was purified using preparative LCMS (pH 10) to give the title compound. LCMS calc. for CigHn jOz (M+H)+: m/z = 348.1 ; found: 348.0. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With [1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene](3-chloropyridyl)palladium(ll) dichloride; caesium carbonate; In 1,2-dimethoxyethane; water; at 120℃; for 1h;Microwave irradiation; | To a microwave vial containing 4-(2-cyclopropyl-7-iodo-1-methyl-1H-benzo[d]imidazol-5-yl)-3,5-dimethylisoxazole (22 mg, 0.056 mmol, 1 equiv.) was added <strong>[1047644-76-7]1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (31 mg, 0.14 mmol, 2.5 equiv.), Cs2CO3 (72 mg, 0.22 mmol, 4 equiv.) and PEPPSI?-IPr catalyst (4 mg, 0.006 mmol, 0.1 equiv.) and dissolved in DME-H2O (4 mL, 0.2 M, 2/1, v/v). The mixture was heated to 120° C. After 1 hr, the reaction was complete. The reaction was concentrated in vacuo and purification was then carried out by reverse phase HPLC to furnish 4-(2-cyclopropyl-7-(1,4-dimethyl-1H-pyrazol-5-yl)-1-methyl-1H-benzo[d]imidazol-5-yl)-3,5-dimethylisoxazole. LCMS (m/z+1) 362.24. 1H NMR (400 MHz, cd3od) delta 7.57 (d, J=1.6 Hz, 1H), 7.46 (s, 1H), 7.02 (d, J=1.6 Hz, 1H), 3.70-3.58 (m, 3H), 3.40 (s, 3H), 2.42 (s, 3H), 2.26 (s, 3H), 2.24-2.12 (m, 1H), 1.93 (s, 3H), 1.20-1.04 (m, 4H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With [1,3-bis(2,6-diisopropylphenyl)imidazol-2-ylidene](3-chloropyridyl)palladium(ll) dichloride; caesium carbonate; In 1,4-dioxane; water; at 130℃; for 0.5h;Inert atmosphere; Microwave irradiation; | 4-(4-Iodo-1H-benzo[d]imidazol-6-yl)-3,5-dimethylisoxazole (0.1 g, 0.3 mmol) was reacted with (6-methylquinolin-5-yl)boronic acid (0.275 g, 1.47 mmol), PEPPSI-IPr catalyst (0.02 g, 0.03 mmol) and Cs2CO3 (0.3 g, 0.9 mmol) in dioxane/water (4/2 ml, degassed with Argon) at 130° C. for 30 min in a microwave reactor. The aqueous layer was discarded, volatiles were removed and the residue was purified via preparatory HPLC (5-100percent, H2O-MeCN, 0.1percent HCl) to afford 3,5-dimethyl-4-(4-(6-methylquinolin-5-yl)-1H-benzo[d]imidazol-6-yl)isoxazole. C22H18N4O. 355.1 (M+1). 1H NMR (400 MHz, dmso) delta 9.41 (s, 1H), 9.07 (d, J=3.7 Hz, 1H), 8.32 (d, J=8.8 Hz, 1H), 8.04 (d, J=8.8 Hz, 1H), 7.96 (d, J=1.4 Hz, 1H), 7.65 (dd, J=8.5, 4.8 Hz, 1H), 7.50 (d, J=1.2 Hz, 1H), 2.46 (s, 3H), 2.28 (d, J=3.0 Hz, 6H). Compound (1020-85) was synthesized in a similar manner as that of Example 83, Step 2, using (1,4-dimethyl-1H-pyrazol-5-yl)boronic acid, pinacol ester. C17H17N5O. 308.1 (M+1) 1H NMR (400 MHz, dmso) delta 9.09 (s, 1H), 9.09 (s, 1H), 7.83 (s, 1H), 7.83 (s, 1H), 7.45 (s, 1H), 7.45 (s, 1H), 7.40 (s, 1H), 7.40 (s, 1H), 3.70 (s, 3H), 2.47 (s, 3H), 2.29 (s, 3H), 1.95 (s, 3H) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
33% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In water; dimethyl sulfoxide; at 150℃; for 0.25h;Inert atmosphere; Sonication; Microwave irradiation; | Step 4: 5- {7-Methanesulfonyl-5- [(S)-oxan-4-yl(phenyl)methylj -5H-pyrido [3,2- bj indol-3-yl}-1 ,4-dimethyl- 1H-pyrazole(S)-3 -Bromo-7-(methylsulfonyl)-5 -(phenyl(tetrahydro-2H-pyran-4-yl)methyl)- 5H-pyrido[3 ,2-b]indole (80.0 mg, 0.0800 mmol) and 1 ,4-dimethyl-5-(4,4,5 ,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (35.6 mg, 0.160 mmol) were dissolved in 2 mL of DMSO. To this was added sodium carbonate (25.5 mg, 0.240 mmol) and 0.1 mL of water. Argon was bubbled through this mixture for 5 mm before adding PdC12(dppf)- CH2C12 adduct (6.54 mg, 8.01 jimol), and then bubbled in argon while sonicating for 30 seconds. The vial was capped and heated in the microwave at 150 °C for 15 mm. Thecrude material was purified via preparative LC/MS (Preparative HPLC Method 1):Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 14.1 mg (33percent), and its estimated purity by LCMS analysis was 98percent. Two analytical LC/MS injections were used to determine the final purity. Injection 1 conditions LC/MS Method 3; HPLC RT = 1.67 mm. Injection 2conditions: LC/MS Method 4; HPLC RT = 2.51 mm. ?H NMR (500MHz, DMSO-d6) oe8.74 (br. s., 1H), 8.60 (s, 1H), 8.48 (d, J=8.4 Hz, 2H), 7.96 (s, 1H), 7.87 (d, J=8.4 Hz, 1H), 7.69 (d, J=7.7 Hz, 3H), 7.46 (s, 1H), 7.38-7.30 (m, 3H), 7.30-7.21 (m, 1H), 6.03 (d, J=11.0 Hz, 1H), 3.95-3.86 (m, 2H), 3.73 (d,J=8.4 Hz, 1H), 3.57-3.43 (m, 2H), 3.37 (br. s., 1H), 3.27 (t,J=12.1 Hz, 1H), 2.90 (s, 3H), 2.74 (s, 3H), 2.03 (s, 3H), 1.81-1.69 (m,1H), 1.68-1.54 (m, 1H), 1.45-1.28 (m, 1H). |
33% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In dimethyl sulfoxide; at 150℃; for 0.25h;Inert atmosphere; Sealed tube; | (S)-3-Bromo-7-(methylsulfonyl)-5-(phenyl(tetrahydro-2H-pyran-4-yl)methyl)-5H-pyrido[3,2-b]indole (80.0 mg, 0.0800 mmol) and <strong>[1047644-76-7]1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> (35.6 mg, 0.160 mmol) were dissolved in 2 mL of DMSO. To this was added sodium carbonate (25.5 mg, 0.240 mmol) and 0.1 mL of water. Argon was bubbled through this mixture for 5 min before adding PdCl2(dppf)-CH2Cl2 adduct (6.54 mg, 8.01 mumol), and then bubbled in argon while sonicating for 30 seconds. The vial was capped and heated in the microwave at 150° C. for 15 min. The crude material was purified via preparative LC/MS (Preparative HPLC Method 1): Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 14.1 mg (33percent), and its estimated purity by LCMS analysis was 98percent. Two analytical LC/MS injections were used to determine the final purity. Injection 1 conditions LC/MS Method 3; HPLC RT=1.67 min. Injection 2 conditions: LC/MS Method 4; HPLC RT=2.51 min. 1H NMR (500 MHz, DMSO-d6) delta 8.74 (br. s., 1H), 8.60 (s, 1H), 8.48 (d, J=8.4 Hz, 2H), 7.96 (s, 1H), 7.87 (d, J=8.4 Hz, 1H), 7.69 (d, J=7.7 Hz, 3H), 7.46 (s, 1H), 7.38-7.30 (m, 3H), 7.30-7.21 (m, 1H), 6.03 (d, J=11.0 Hz, 1H), 3.95-3.86 (m, 2H), 3.73 (d, J=8.4 Hz, 1H), 3.57-3.43 (m, 2H), 3.37 (br. s., 1H), 3.27 (t, J=12.1 Hz, 1H), 2.90 (s, 3H), 2.74 (s, 3H), 2.03 (s, 3H), 1.81-1.69 (m, 1H), 1.68-1.54 (m, 1H), 1.45-1.28 (m, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,2-dimethoxyethane; water; at 100℃; for 1h;Microwave irradiation; Inert atmosphere; | 10314] In a microwave vial was dissolved ethyl 2-bromo-6-methoxybenzoate (500 g, 1.54 mmol) and 1,4-dimethyl-5- (4,4,5,5-tetramethyl- 1 ,3,2-dioxaborolan-2-yl)-1 H-pyrazole (377 g, 1.70 mmol) in DME (10 mE) and water (2 mE). Na2CO3 (259 g, 3.09 mmol) was then added followed by Pd(PPh3)4 (89 mg, 0.077 mmol) and the reaction mixture was degassed with N2 for 10 minutes. The reaction mixture was then heated at 1000 C. for h in the microwave. The mixture was cooled to room temperature, filtered through Celite and washed with EtOAc and DCM. The crude solution was concentrated in vacuo and directly purified via silica gel chromatography (10-80percent EtOAc in hexanes) to afford the title compound (402 g, 95percent). MS (ESI) mass calcd. for C,5H,8N203, 274.1; mlz found 275.2 [M+H]. 1H NMR (400 MHz, Chloroform-d) 7.45 (dd, J=8.4, 7.6 Hz, 1H), 7.29 (s, 1H), 7.04 (dd, J=8.5, 0.9 Hz, 1H), 6.84 (dd, J=7.6, 0.9 Hz, 1H), 4.07 (qd, J=7.2, 1.5 Hz, 2H), 3.90 (s, 3H), 3.61 (s, 3H), 1.86 (s, 3H), 1.01 (t, J=7.1 Hz, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; sodium carbonate; In 1,4-dioxane; water; at 90℃; for 3h;Inert atmosphere; | To a solution of methyl 2-(2-(3- ((R)-3-(tert-butoxycarbonyl(methyl)amino)-2-(tert- butyldimethylsilyloxy)propoxy)phenyl)- 6-chloro-5-methylpyrimidin-4-yl)-2,7-diaza- spiro[3.5] nonane-7-carboxylate (160 mg, 0.23 mmol) in degassed dioxane:H20 (5: 1, 6 mL) was added l,4-dimethyl-5-(4,4,5,5-tetramethyl- l,3,2-dioxaborolan-2-yl)-lH-pyrazole (78 mg, 0.35 mmol), Pd(dppf)Cl2 (16 mg, 0.02mmol) and Na2C03 (73 mg, 0.69 mmol) at room temperature. The system was purged with N2 and the mixture was stirred at 90°C for 3h. After being cooled down to room temperature the mixture was filtered through a pad of celite. The filtrate was concentrated and the resulting residue was purified by preparative-TLC on silicagel eluting with petroleum ether/EtOAc = 2/1 to give methyl 2-(2-(3- ((R)-3-(tert-butoxycarbonyl (methyl)amino)-2-(tert- butyldimethylsilyloxy)propoxy) phenyl)-6-(l,4-dimethyl-lH-pyrazol-5-yl)-5- methylpyrimidin-4-yl)-2,7-diazaspiro[3.5]nonane-7-carboxylate (130 mg, 74percent yield) as a white solid. ESI-LCMS (m/z): 764.1 found for [M+l]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
47% | With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,4-dioxane; water; at 90℃; for 16h;Inert atmosphere; | To a solution of (R)-tert-butyl 2-(tert-butyldimethylsilyloxy)-3- (4-chloro-3-(4,6- dichloro-5-methylpyrimidin-2-yl)phenoxy)propyl(methyl)carbamate (1.0 g, 1.7 mmol) in degassed dioxane and H20 (3/1, 20 niL) was added Na2C03 (541 mg, 5.1 mmol), Pd(PPh3)4 (98 mg, 0.08 mmol) and l,4-dimethyl-5-(4,4,5,5-tetramethyl-l,3,2-dioxa- borolan-2-yl)-lH-pyrazole (755 mg, 3.4 mmol). The system was purged with N2 and the mixture was stirred at 90 °C for 16h. After being cooled down to room temperature, the solvent was removed in vacuo. The residue was diluted with water (30 mL) and extracted with EtOAc (100 mL x 2). The combined organic layers were washed with water (30 mL) and brine (30 mL), dried over Na2S04, filtered and concentrated. The residue was purified by column chromatography over silicagel (petroleum ether/EtOAc = 4/1) to give tert-butyl (2R)- 2-(tert-butyldimethylsilyloxy)- 3-(4-chloro- 3-(4-chloro-6-(l,4-dimethyl-lH-pyrazol-5-yl)-5- methylpyrimidin-2-yl)phenoxy)propyl(methyl) carbamate (520 mg, 47 percent yield) as white solid. ESI-LCMS (m/z): 650 found for [M+l]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
25% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; sodium carbonate; In 1,4-dioxane; water; at 100℃; for 4h;Inert atmosphere; | Dissolved (S)-7-chloro-3-(l,4-dimethyl-lH-l,2,3-triazol-5-yl)-5- (phenyl(tetrahydro-2H-pyran-4-yl)methyl)-5H-pyrrolo[2,3-b:4,5-b']dipyridine (47.3 mg, 0.1 mmol) and (l,4-dimethyl-lH-pyrazol-5-yl)boronic acid (28.0 mg, 0.200 mmol) in 1.7 mL of dioxane. Added PdCl2(dppf)-CH2Cl2Adduct (8.2 mg, 10.0 muiotaetaomicron) and 0.3 mL of a 1M aqueous solution of sodium carbonate (300 mu, 0.300 mmol). Bubbled in argon for 2 min while sonicating. Heated in an oil bath at 100 °C for 4 h. The crude material was purified via preparative LC/MS with the following conditions: Column: XBridge CI 8, 19 x 200 mm, 5-muiotaeta particles; Mobile Phase A: 5:95 ACN: water with 10-mM MLtOAc; Mobile Phase B: 95:5 ACN: water with 10-mM NH4OAc; Gradient: 30-70percent B over 20 min, then a 5-min hold at 100percent B; Flow: 20 mL/min. Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 13.6 mg (25percent), and its estimated purity by LCMS analysis was 97percent. Two analytical LC/MS injections were used to determine the final purity. Injection 1 conditions: Column: Waters BEH CI 8, 2.0 x 50 mm, 1.7-muiotaeta particles; Mobile Phase A: 5:95ACN:water with 10 mM NH4OAc; Mobile Phase B: 95:5 ACN:water with 10 mM MLtOAc; Temperature: 50 °C; Gradient: 0percentB, 0-100percent B over 3 min, then a 0.5-min hold at 100percent B; Flow: 1 mL/min; Detection: UV at 220 nm. RT = 1.78 min, M+H = 533. Injection 2 conditions: Column: Waters BEH CI 8, 2.0 x 50 mm, 1.7-mupiiota particles; Mobile Phase A: 5:95 methanol: water with 10 mM MLtOAc; Mobile Phase B: 95:5 methanol: water with 10 mM MLtOAc; Temperature: 50 °C; Gradient: 0percentB, 0-100percent B over 3 min, then a 0.5-min hold at 100percent B; Flow: 0.5 mL/min; Detection: UV at 220 nm. RT = 2.80 min, M+H = 533. NMR (500MHz, DMSO-de) delta 8.70 (d, J=8.1 Hz, 1H), 8.64 (s, 1H), 8.54 (br. s., 1H), 7.81 (d, J=8.1 Hz, 1H), 7.76 (d, J=7.3 Hz, 2H), 7.32 (t, J=7.5 Hz, 2H), 7.24 (t, J=7.2 Hz, 1H), 6.80 (s, 1H), 6.04 (br. s., 1H), 4.36 (s, 3H), 4.03 (s, 3H), 3.90 (d, J=11.4 Hz, 1H), 3.75 (d, J=9.2 Hz, 1H), 3.65 (br. s., 1H), 3.25 (t, J=11.4 Hz, 1H), 2.31 (s, 3H), 2.26 (s, 3H), 1.62 (br. s., 1H), 1.52 - 1.37 (m, 1H), 1.37 - 1.24 (m, 1H), 1.19 (br. s., 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
20% | With dichloro(1,1'-bis(diphenylphosphanyl)ferrocene)palladium(II)*CH2Cl2; potassium carbonate; In 1,4-dioxane; water; at 100℃; for 0.833333h;Inert atmosphere; Sealed tube; | Dissolved (S)-3-bromo-7-(methylsulfonyl)-5-(phenyl(tetrahydro-2H-pyran-4- yl)methyl)-5H-pyrrolo[2,3-b:4,5-b']dipyridine (30 mg, 0.060 mmol) in 1.5 mL of dioxane and l,4-dimethyl-5-(4,4,5,5-tetramethyl-l,3,2-dioxaborolan-2-yl)-lH-pyrazole (20.0 mg, 0.090 mmol) and 0.2 mL of water. Potassium carbonate (24.9 mg, 0.180 mmol) and PdCl2(dppf)-CH2Cl2 adduct (3.4 mg, 4.20 muiotatauiotaomicron) were added and bubbled in argon while sonicating for 5 min. Capped vial and heated at 100 °C for 50 min and filtered. The crude material was purified via preparative LC/MS with the following conditions: Column: XBridge C18, 19 x 200 mm, 5-muiotaeta particles; Mobile Phase A: 5:95 ACN: water with 10-mM NH4OAc; Mobile Phase B: 95:5 ACN: water with 10-mM NH4OAc; Gradient: 20-60percent B over 30 min, then a 5-min hold at 100percent B; Flow: 20 mL/min. Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 6.3 mg (20percent), and its estimated purity by LCMS analysis was 99percent. Two analytical LC/MS injections were used to determine the final purity. Injection 1 conditions: Column: Waters BEH C18, 2.0 x 50 mm, 1.7-muetaiota particles; Mobile Phase A: 5:95 ACN:water with 10 mM Nl UOAc; Mobile Phase B: 95:5 ACN:water with 10 mM NH4OAc; Temperature: 50 °C; Gradient: 0percentB, 0-100percent B over 3 min, then a 0.5-min hold at 100percent B; Flow: 1 mL/min; Detection: UV at 220 nm. RT = 1.75 min, M+H = 516. Injection 2 conditions: Column: Waters BEH C18, 2.0 x 50 mm, 1.7-muetaiota particles; Mobile Phase A: 5:95 methanol: water with 10 mM NFUOAc; Mobile Phase B: 95:5 methanol: water with 10 mM NFUOAc; Temperature: 50 °C; Gradient: 0percentB, 0-100percent B over 3 min, then a 0.5-min hold at 100percent B; Flow: 0.5 mL/min; Detection: UV at 220 nm. RT = 2.52 min, M+H = 516. NMR (500MHz, DMSO-de) delta 8.94 (d, J=7.7 Hz, 1H), 8.73 - 8.64 (m, 2H), 8.04 (d, J=7.7 Hz, 1H), 7.83 (d, J=7.7 Hz, 2H), 7.47 (s, 1H), 7.36 - 7.28 (m, 2H), 7.28 - 7.19 (m, 1H), 5.94 (d, J=11.4 Hz, 1H), 3.94 - 3.85 (m, 1H), 3.80 - 3.65 (m, 2H), 3.52 (s, 3H), 3.48 - 3.35 (m, 2H), 3.25 (t, J=10.8 Hz, 1H), 2.07 (s, 3H), 1.50 (br. s., 1H), 1.44 (d, J=12.1 Hz, 1H), 1.36 - 1.21 (m, 1H), 1.17 (d, J=12.8 Hz, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
8 mg | In methanol; | Example 68 6-[6-Amino-5-(2,4-dimethyl-2H-pyrazol-3-yl)-pyridin-2-ylmethyl]-5-methyl-[1,2,5]oxadiazolo[3,4-b]pyridin-7-ylamine Obtained by starting from 6-(6-Amino-5-bromo-pyridin-2-ylmethyl)-5-methyl-[1,2,5]oxadiazolo[3,4-b]pyridin-7-ylamine 65.2 and <strong>[1047644-76-7]1,4-dimethyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole</strong> and additional methanol. The mixture is filtered over silica gel and washed with ethyl acetate. The organic phase is dried, concentrated under reduced pressure and purified by RP-HPLC (modifier: trifluoroacetic acid). The residue is diluted in acetonitrile, basified with triethylamine and purified by RP-HPLC (modifier: ammonium hydroxide). Yield: 8 mg (24percent of theory) Mass spectrometry (ESI+): m/z=351 [M+H]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
49% | With tetrakis(triphenylphosphine) palladium(0); In 1,4-dioxane; water; at 90℃; for 5h;Inert atmosphere; | To a solution of (5)-5-(5-bromo- 1 -(4,4-difluorocyclohexyl)- 1H-benzo[d]imidazol-2-yl)-1-(3,4-difluorophenyl)pyrrolidin-2-one (100 mg, 0.196 mmol), potassium carbonate(54.2 mg, 0.392 mmol) and 1 ,4-dimethyl-5-(4,4,5, 5-tetramethyl- 1,3 ,2-dioxaborolan-2- yl)-1H-pyrazole (56.6 mg, 0.255 mmol) in 1,4-dioxane (2 ml, 23.38 mmol) and water (0.4 ml, 22.20 mmol) was added Pd(Ph3P)4 (34.0 mg, 0.029 mmol). The mixture was degassed with nitrogen and heated at 90°C for 5 h and then cooled to RT. The volatilewas removed in vacuo. The residue was treated with water (20 mL) and extracted with DCM (3 x 20 mL). The organic extracts were combined and then dried over MgSO4, filtered and concentrated in vacuo to afford a red oil, which was purified by flash chromatography on silica gel (12 g column, 0-40percent THF/DCM) to give a colourless solid. The crude product was loaded onto a column of SCX (2 g) in MeOH. The columnwas washed with MeOH and then the product was eluted with 0.7 M ammonia in MeOH. The resultant mixture was concentrated in vacuo to afford (S)-5-(1-(4,4- difluorocyclohexyl)-5 -(1 ,4-dimethyl- 1 H-pyrazol-5 -yl)- 1 H-benzo[d]imidazol-2-yl)- 1- (3,4-difluorophenyl)pyrrolidin-2-one (51 mg, 49percent) as a colourless solid; Rt 2.22 mm (method 1), mlz 526 (M+H)+ (ES+); 1H NIVIR (d6-DMSO) : 7.86 (ddd, J = 13.3, 7.4,2.6 Hz, 1H), 7.69 - 7.60 (m, 2H), 7.47 - 7.33 (m, 1H), 7.30 (d, J = 0.6 Hz, 1H), 7.26 (dd,J = 8.6, 1.6 Hz, 1H), 7.22 -7.15 (m, 1H), 6.08 (d, J = 7.4 Hz, 1H), 4.83 (t, J = 12.3 Hz,1H), 3.68 (s, 3H), 2.85 - 2.62 (m, 2H), 2.61 - 2.52 (m, 1H), 2.49 - 2.42 (m, 2H), 2.34 -2.10 (m, 5H), 2.08 -2.01 (m, 1H), 2.01 - 1.95 (m, 1H), 1.94 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
25% | With tetrakis(triphenylphosphine) palladium(0); potassium carbonate; In 1,4-dioxane; water; at 85℃; for 2h;Inert atmosphere; | A tube containing (S)-6-(5-bromo-1-(trans-4-hydroxycyclohexyl)-1H- benzo[d]imidazol-2-yl)- 1 -(3 ,4-difluorophenyl)piperidin-2-one (intermediate 17, 100 mg, 0.20 mmol), 1 ,4-dimethyl-5-(4,4,5, 5-tetramethyl- 1,3 ,2-dioxaborolan-2-yl)- 1H- pyrazole (50 mg, 0.23 mmol), potassium carbonate (80 mg, 0.58 mmol) and Pd(Ph3P)4(20 mg, 0.0 17 mmol) was evacuated and backfilled with nitrogen three times. Water (1 mL) and 1,4-dioxane (2 mL) were added then the evacuate and backfill procedure was repeated three times. The mixture was heated to 85 °C with stirring for 2 h. The mixture was diluted with water (10 mL) then extracted with ethyl acetate (2 x 10 mL). The combined organic phases were concentrated under reduced pressure. The crude productwas purified by flash chromatography (50-100percent MeAc/isohexane) to afford a colourless gum which was triturated in tert-butyl methyl ether to afford (S)-1-(3,4- difluorophenyl)-6-(5 -(1 ,4-dimethyl- 1 H-pyrazol-5 -yl)- 1 -(trans-4-hydroxycyclohexyl)- 1H-benzo[d]imidazol-2-yl)piperidin-2-one (27 mg, 0.049 mmol, 25 percent yield) as a white solid. LCMS (method 1): R 1.65 mi m/z 520 (M+H)t 1H NIVIR (400 IVIHz, DMSO20 d6) 7.81 (d, J = 8.5 Hz, 1H), 7.70 (d, J = 1.6 Hz, 1H), 7.44- 7.29 (m, 3H), 7.16 (dd, J= 8.5, 1.7 Hz, 1H), 7.08 -7.02 (m, 1H), 5.78 (t, J = 4.7 Hz, 1H), 4.71 (d, J = 4.1 Hz,1H), 4.41 - 4.26 (m, 1H), 3.71 (s, 3H), 3.69 - 3.60 (m, 1H), 2.65 - 2.51 (m, 2H), 2.45 -2.34 (m, 1H), 2.31 -2.12 (m, 2H), 2.08 - 1.97 (m, 2H), 1.96 (s, 3H), 1.92- 1.72 (m,3H), 1.50- 1.34 (m, 2H), 1.26-1.15 (m, 1H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
24% | With methanesulfonato(2-dicyclohexylphosphino-2',6'-di-i-propoxy-1,1'-biphenyl)(2'-amino-1,1'-biphenyl-2-yl)palladium(ll); potassium carbonate; In 1,4-dioxane; water; at 120℃; for 0.333333h;Microwave irradiation; | . Tert-butyl l-(((6-chloropyridazin-3-yl)amino)methyl)-6- azaspiro[2,5]oetane-6-carboxylate (prepared as described in Example 1) (133 mg, 0,38 mmol), l,4-dimethylpyrazole-5-boronic acid pinacol ester (125 mg, 0,56 mmol), K2C03 (158 mg, 1.13 mmol) and RuPhos-Pd-G3 (16 mg, 0.019 mmol) were dissolved in 5: 1 l,4-dioxanes/H20 (3 mL, degassed), and the resulting solution was heated under microwave irradiation at 120 °C for 20 min, after which time the reaction mixture was cooled to r.t, and diluted with sat. NaHC03 and DCM. Aqueous layer was extracted with DCM (3x), and combined organic extracts were filtered through a phase separator and concentrated. Crude residue was purified by column (0509) chromatography (12-100 percent EtOAc/hexanes to 0-1.0percent MeOH EtOAc) to give the title compound as a colorless oil (37 mg, 24percent), ES-MS | M I I I - 413.2. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | With methanesulfonato(2-dicyclohexylphosphino-2',6'-di-i-propoxy-1,1'-biphenyl)(2'-amino-1,1'-biphenyl-2-yl)palladium(ll); potassium carbonate; In 1,4-dioxane; water; at 100℃; for 1h;Inert atmosphere; Sealed tube; | Tert-butyl l-((6-chloropyridazin-3-yl)carbamoyl)-6- azaspiro[2,5]oetane-6-earboxylate (61 mg, 0.17 mmol), l,4-dimethylpyrazole-5-boronic acid pinacol ester (44 mg, 0,20 mmol), K2C03 (70 mg, 0.50 mmol) and RuPhos-Pd-G3 (7 mg, 0.008 mmol) were combined in a sealed vial, and 5: 1 l,4-dioxanes H20 solution (1.2 mL, degassed) was added. The resulting suspension was stirred at 100 °C under an inert atmosphere for 1 h, after which time the reaction mixture was cooled to r.t. and diluted with H20. Aqueous layer was extracted with DCM, and combined organic extracts were filtered through a phase separator and concentrated. Crude residue was purified by column chromatography (hex/EtOAc) to give the title compound as a colorless oil (55 mg, 78percent). ES-MS I M 1 11 = 427.2. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
74% | With [(2-di-cyclohexylphosphino-3,6-dimethoxy-2?,4?,6?-triisopropyl-1,1?-biphenyl)-2-(2?-amino-1,1?-biphenyl)]palladium(II) methanesulfonate; potassium carbonate; In 1,4-dioxane; water; at 120℃; for 0.333333h;Microwave irradiation; Inert atmosphere; | tert-Butyl 1 -(((6- chloropyridazin-3-yl)(methyl)amino)methyl)-6-azaspiro[2.5]octane-6-carboxylate (37 mg, 0.10 mmol), l,4-dimethylpyrazole-5-boronic acid pinacol ester (40 mg, 0.18 mmol), K2C03 (42 mg, 0.30 mmol) and BrettPhos-Pd-G3 (4.6 mg, 0.005 mmol) were combined in a microwave vial, and 5: 1 1 ,4-dioxanes/H20 solution (1 niL, degassed) was added under an inert atmosphere. The resulting mixture was heated under microwave irradiation at 20 °C for 20 min, after which time the reaction mixture was diluted with DCM and sat. NaHC03. The aqueous layer was extracted with DCM, and combined organic extracts were passed through a phase separator and concentrated under reduced pressure. Crude residue was purified by column chromatography (hexanes/EtOAc) to give the title compound as a yellow oil (32 nig, 74percent). [M+H]+ = 427.4. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With methanesulfonato(2-dicyclohexylphosphino-2',6'-di-i-propoxy-1,1'-biphenyl)(2'-amino-1,1'-biphenyl-2-yl)palladium(II); potassium carbonate; In 1,4-dioxane; water; at 100℃; for 18h;Inert atmosphere; | [00176] Tert-butyl 1-(6-(1,4-dimethyl-1H-pyrazol-5-yl)pyridazin-3- yl)hexahydropyrrolo[3,4-b]pyrrole-5(1H)-carboxylate (B). To a microwave vial was added <strong>[1047644-76-7]1,4-dimethylpyrazole-5-boronic acid pinacol ester</strong> (105 mg, 0.48mmol), compound A (110 mg, 0.34 mmol), potassium carbonate (143 mg, 1.02 mmol), and RuPhos-Pd-G3 (14 mg, 0.02 mmol). The vial was purged with nitrogen and 1,4-dioxane/H2O (5:1; degassed) was added under an inert atmosphere. The resulting mixture was stirred at 100 °C for 18 hours, after which time LCMS indicated product formation. The reaction mixture was filtered over Celite, the Celite plug was washed with DCM, and saturated aqueous NaHCO3 was added to the filtrate. The DCM layer was then isolated and the aqueous layer was extracted with CHCl3/IPA (4:1) (3 × 10 mL). The combined organic layers were passed through a phase separator (0268) and concentrated. Crude product was purified using Teledyne ISCO Combi-Flash system (liquid loading with DCM, 24G column, 0 -50percent EtOAc/DCM, 14 min run, then 0-4.5percent MeOH/DCM, 19 min run) to give the title compound B (120 mg, 0.31mmol, 92percent yield) as an orange oil. [M+H] = 385.2; RT = 0.673.1H NMR (400 MHz, chloroform-d): 7.35 (s, 1H), 7.31 - 7.33 (d, J = 9.10 Hz, 1H), 6.71 - 6.73 (d, J = 9.10 Hz, 1H), 4.59? 4.68 (m, 1H), 3.99 (s, 3H) 3.49? 3.83 (m, 5H), 3.33? 3.34 (m, 1H), 3.06 (s, 1H), 2.18? 2.20 (m, 1H), 2.09 (s, 3H), 2.00 (bs, 1H), 1.41 (s, 9H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | With methanesulfonato(2-dicyclohexylphosphino-2?,6?-di-i-propoxy-1,1?-biphenyl)(2?-methylamino-1,1?-biphenyl-2-yl)palladium(II); potassium carbonate; In 1,4-dioxane; diethyl ether; at 130℃; for 0.333333h;Microwave irradiation; Inert atmosphere; | To a microwave vial was added tert-butyl 4-[(6-chloropyridazin-3-yl)amino]- 3,3a,4,5,6,6a-hexahydro-lH-cyclopenta[c]pyrrole-2-carboxylate (106 mg, 0.310 mmol), 1,4- dimethylpyrazole-5-boronic acid pinacol ester (208 mg, 0.94 mmol), potassium carbonate (132 mg, 0.94 mmol), and RuPhos-Pd-G3 (26mg, 0.03mmol). The vial was purged with N2 and 5: 1 dioxane/EhO (degassed) was added under an inert atmosphere. The resulting mixture was irradiated in the Biotage microwave at 130 °C for 20 minutes. The reaction mixture was filtered over Celite, the Celite plug was washed with DCM, and saturated aqueous NaHCC was added to the filtrate. The DCM layer was then isolated and the aqueous layer was extracted with chloroform/IPA (4: 1) (3 x 10 rriL). The organic layers were passed through a phase separator and concentrated. The crude product was purified using Teledyne ISCO Combi-Flash system (liquid loading with DCM, 12G column, 0-50percent EtOAc/DCM, 10 min run; then 0-5percent (0349) MeOH/DCM/0.1percentNH4OH) to afford the title compound (82mg, 0.205mmol, 66percent yield). (0350) LCMS (90 sec method): RT = 0.661, m/z = 399.2 [M + H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | With methanesulfonato(2-dicyclohexylphosphino-2?,6?-di-i-propoxy-1,1?-biphenyl)(2?-methylamino-1,1?-biphenyl-2-yl)palladium(II); potassium carbonate; In 1,4-dioxane; diethyl ether; at 100℃; for 18h;Inert atmosphere; | To a vial was added tert-butyl 4-(6-chloropyridazin-3-yl)oxy-3,3a,4,5,6,6a- hexahydro-lH-cyclopenta[c]pyrrole-2-carboxylate (179 mg, 0.53 mmol), 1 ,4-dimethylpyrazole- 5-boronic acid pinacol ester (327 mg, 1.47 mmol), potassium carbonate (221 mg, 1.58 mmol), and RuPhos-Pd-G3 (44 mg, 0.10 mmol). The vial was purged with N2 then 5: 1 dioxane/EhO (degassed) was added under an inert atmosphere. The resulting mixture was stirred at 100 °C for 18h. The reaction mixture was filtered over Celite, the Celite plug was washed with DCM, and saturated aqueous NaHCCb was added to the filtrate. The DCM layer was then isolated and the aqueous layer was back extracted with chloroform/IPA (4: 1) (3 chi 10 mL). The organic layers were passed through a phase separator and concentrated. The crude product was purified using Teledyne ISCO Combi-Flash system (liquid loading, 12G column, 10-80percent EtOAc/hexanes, 25 min run). Fractions containing the product were pooled and concentrated to afford the title compound (1 17 mg, 0.29 mmol, 56percent yield) as a yellow solid. LCMS (90 sec method): RT = 0.924, m/z = 400.2 [M + H - tBu]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | With methanesulfonato(2-dicyclohexylphosphino-2?,6?-di-i-propoxy-1,1?-biphenyl)(2?-methylamino-1,1?-biphenyl-2-yl)palladium(II); potassium carbonate; In 1,4-dioxane; diethyl ether;Inert atmosphere; Microwave irradiation; | To a microwave vial was added tert-butyl 4-[2-[(6-chloropyridazin-3- yl)amino]ethyl]-3,3a,4,5,6,6a-hexahydro-lH-cyclopenta[c]pyrrole-2-carboxylate (200 mg, 0.55 mmol), potassium carbonate (229 mg, 1.64 mmol), l,4-dimethylpyrazole-5-boronic acid pinacol ester (339 mg, 1.52 mmol), and RuPhos-Pd-G3 (46 mg, 0.06 mmol). The vial was purged with N2 and then dioxane/thO (5: 1, degassed) was added under an inert atmosphere. The reaction mixture was filtered over Celite, the Celite plug was washed with DCM, and a saturated aqueous solution of NaHCC was added to the filtrate. The DCM layer was then isolated and the aqueous layer was extracted with chloroform/IPA (4: 1) (3 chi 10 mL). The organic layers were passed through a phase separator and concentrated. The crude product was purified using Teledyne ISCO Combi-Flash system (liquid loading with DCM, 12G column, 0-5percent MeOH/DCM, 25 mm run) to afford the title compound (206 mg, 0.484 mmol, 89percent yield). LCMS (90 sec method): RT = 0.770, m/z = 427.2 [M + H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | With methanesulfonato(2-dicyclohexylphosphino-2?,6?-di-i-propoxy-1,1?-biphenyl)(2?-methylamino-1,1?-biphenyl-2-yl)palladium(II); potassium carbonate; In 1,4-dioxane; water; at 100℃; for 21h;Inert atmosphere; Microwave irradiation; | To a microwave vial was added tert-butyl 4-[[(6-chloropyridazin-3- yl)amino]methyl]-3,3a,4,5,6,6a-hexahydro-lH-cyclopenta[c]pyrrole-2-carboxylate (132.9 mg, 0.380 mmol), l,4-dimethylpyrazole-5-boronic acid pinacol ester (125.47 mg, 0.56 mmol), potassium carbonate (0.07 mL, 1.13 mmol), and RuPhos-Pd-G3 (15.77 mg, 0.020 mmol). The vial was purged with N2, then 1,4-dioxane (1.2 mL) and water (0.30 mL) were added (solvents were degassed). The vial was capped and heated to 100 °C for 18h. The vial was recharged with RuPhos-Pd-G3 (15.77 mg, 0.020 mmol) and l,4-dimethylpyrazole-5-boronic acid pinacol ester (125.47 mg, 0.56 mmol), capped, and heated in a microwave reactor for 30 minutes at 130 °C. The mixture was filtered over a pad of Celite and concentrated. The crude product was purified using Teledyne ISCO Combi-Flash system (liquid loading in DCM, 12G column, 0-50percent EtOAc/DCM, 7 min; then 0 - 6percent MeOH/DCM, 9 min run) to give the title compound (117.6 mg,0.29 mmol, 76percent yield). LCMS (90 sec method): RT = 0.712, m/z = 413.3 [M + H]+. |
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