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[ CAS No. 125872-95-9 ] {[proInfo.proName]}

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Chemical Structure| 125872-95-9
Chemical Structure| 125872-95-9
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Product Details of [ 125872-95-9 ]

CAS No. :125872-95-9 MDL No. :MFCD08543444
Formula : C9H8BrN Boiling Point : -
Linear Structure Formula :- InChI Key :PXHJDPPKNUGKPM-UHFFFAOYSA-N
M.W : 210.07 Pubchem ID :15546854
Synonyms :

Calculated chemistry of [ 125872-95-9 ]

Physicochemical Properties

Num. heavy atoms : 11
Num. arom. heavy atoms : 9
Fraction Csp3 : 0.11
Num. rotatable bonds : 0
Num. H-bond acceptors : 0.0
Num. H-bond donors : 0.0
Molar Refractivity : 50.9
TPSA : 4.93 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : Yes
P-gp substrate : No
CYP1A2 inhibitor : Yes
CYP2C19 inhibitor : Yes
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -5.16 cm/s

Lipophilicity

Log Po/w (iLOGP) : 2.37
Log Po/w (XLOGP3) : 3.41
Log Po/w (WLOGP) : 2.94
Log Po/w (MLOGP) : 2.61
Log Po/w (SILICOS-IT) : 2.63
Consensus Log Po/w : 2.79

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 1.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -3.9
Solubility : 0.0267 mg/ml ; 0.000127 mol/l
Class : Soluble
Log S (Ali) : -3.19
Solubility : 0.135 mg/ml ; 0.000641 mol/l
Class : Soluble
Log S (SILICOS-IT) : -3.7
Solubility : 0.0415 mg/ml ; 0.000198 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.47

Safety of [ 125872-95-9 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H302-H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 125872-95-9 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 125872-95-9 ]
  • Downstream synthetic route of [ 125872-95-9 ]

[ 125872-95-9 ] Synthesis Path-Upstream   1~9

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Reference: [1] Patent: US6017945, 2000, A,
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  • [ 20996-87-6 ]
Reference: [1] Bioorganic and Medicinal Chemistry Letters, 2002, vol. 12, # 2, p. 125 - 128
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Reference: [1] Bioorganic and Medicinal Chemistry Letters, 2002, vol. 12, # 2, p. 125 - 128
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  • [ 21005-45-8 ]
Reference: [1] Journal of Organometallic Chemistry, 2011, vol. 696, # 5, p. 1072 - 1083
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YieldReaction ConditionsOperation in experiment
91%
Stage #1: With sodium hydride In tetrahydrofuran; mineral oil for 0.333333 h; Inert atmosphere
Stage #2: for 0.333333 h; Inert atmosphere
A 1 -round-bottom flask was charged with 6-bromo-lH-indole (14.88 g, 76 mmol) and THF (150 ml) to give a dark maroon solution. The flask was put under a 2 sweep, and sodium hydride (60 wtpercent) (3.64 g, 91 mmol) was added in several portions over 15 min. The resulting mixture was stirred for 20 min, then iodomethane (5.94 ml, 95 mmol) was added via syringe. Within a few minutes, an exotherm was observed. After stirring for 20 min, the mixture was concentrated in vacuo, and the residue was taken up in saturated aq. sodium bicarbonate solution and extracted with DCM (3x). The combined organic extracts were dried over sodium sulfate, filtered, and concentrated. The crude product was purified by chromatography on silica gel (0 to 40percent EtO Ac/Heptane) to afford 6-bromo-l -methyl- lH-indole (14.44 g, 68.7 mmol, 91 percent yield) as a lightly colored oil. .H NMR (400MHz, CDC13) δ = 7.51 - 7.46 (m, 2 H), 7.24 - 7.19 (m, 1 H), 7.03 (d, J = 3.1 Hz, 1 H), 6.47 (dd, J = 0.9, 3.1 Hz, 1 H), 3.77 (s, 3 H).
84%
Stage #1: With sodium hydride In N,N-dimethyl-formamide; mineral oil for 0.333333 h; Cooling with ice; Inert atmosphere
Stage #2: for 0.5 h; Cooling with ice
To a solution of 6-bromo-1H-indole (3.00 g, 15.3 mmol) in DMF (30 mL),NaH (60percent, 734 mg, 18.4 mmol) was added in an ice-water bath, and the mixture was stirred at this temperature for 20 minutes. Then a solution of MeI (1.14 mL, 18.4 mmol) in DMF (10 mL) was added dropwise, and the mixture was stirred at this temperature for 30 minutes. 100 mL of water was added, and the reaction solution was extracted with EtOAc. The EtOAc phase was washed several times with saturated brine, dried over anhydrous sodium sulfate, concentrated, and purified by column chromatography (eluent: pure PE) to obtain the title compound 6-bromo-1-methyl-1H-indole (2.70 g, 84 percent).
79.1%
Stage #1: With sodium hydride In N,N-dimethyl-formamide at 0 - 7℃; for 3 h;
Stage #2: at 0 - 25℃; for 2 h;
To a suspension of 60percent NaH (3.61 g, 90.3 mmol) in dry DMF (150 mE) was added 6-bromoindole (11.8 g, 60.191 mmol) at 0° C. in portions. Caution: gas evolved. The inner temperature rose to 7° C. The mixture was re-cooled to 0° C. To the resulting red suspension was stirred at 0° C. for 3 h. CH3I (3.26 g, 23 mmol) was added dropwise at 0° C.-5° C. The reaction suspension was stirred at room temperature (25° C.) for 2 h. TEC (petroleum ether/EtOAc=8/i) showed most of the starting material was consumed and a good spot was formed. The mixture was poured into ice water (200 mE) and extracted with petroleum ether (100 mEx3). The extract was washed with brine (100 mE), dried over Na2 SO4 and concentrated in vacuo to dryness to afford crude (15 g). The crude was purified by silica gel chromatography eluted with EtOAc in petroleum ether from 0 to 10percent to afford J-2 (10 g, 79.1percent) as a slight yellow oil. ‘H NMR (400 MHz, CDC13) ö ppm 7.49-7.47 (m, 2H), 7.22 (d, 1H), 7.03 (d, 1H), 6.46 (d, 1H),3.76 (s, 3H).
63% With potassium carbonate In acetone at 55℃; for 16 h; A mixture of 6-bromo-1H-indole (5 g, 25.50 mmol, 1.00 equiv), K2CO3 (7 g, 50.65 mmol, 2.00 equiv), and CH3I (7.3 g, 51.43 mmol, 2.00 equiv) in acetone (100 mL) was stirred for 16 h at 55° C., then cooled to rt, diluted with 100 mL H2O, and extracted with 2×200 mL of EtOAc. The combined organic layers were washed with 100 mL of brine, dried over Na2SO4, concentrated under vacuum, and purified with silica gel chromatography using EtOAc/petroleum ether (1:10) to afford 3.4 g (63percent) of the title compound as a yellow oil. LC-MS: (ES, m/z): 208. 1H NMR (300 MHz, DMSO-d6) δ 7.69 (dt, J=1.6, 0.7 Hz, 1H), 7.49 (dd, J=8.4, 0.6 Hz, 1H), 7.34 (d, J=3.1 Hz, 1H), 7.13 (dd, J=8.4, 1.8 Hz, 1H), 6.43 (dd, J=3.1, 0.9 Hz, 1H), 3.77 (s, 3H).
62%
Stage #1: With potassium carbonate In dimethyl sulfoxide at 20℃; for 0.5 h;
Stage #2: at 20℃;
a) 6-bromo-l -methyl- lH-indoleA solution of 6-bromo-l H-indole (1.530 mmol) in dimethyl sulfoxide (10 mL) was treated with potassium carbonate (4.59 mmol) and was stirred at room temperature for 30 min. The solution was then treated with methyl iodide (1.683 mmol) and was stirred at room temperature overnight. The solution was diluted with water (100 mL) and was extracted with ethyl acetate. The combined organic phases were washed with water and brine, dried over magnesium sulfate, filtered and concentrated in vacuo. The crude residue was purified by silica gel chromatography (hexanes) to provide the titlecompound as a yellow oil (62percent). 1H NMR (400 MHz, DMSO-d6) δ ppm 7.70 (s, 1 H) 7.50 (d, J=8.34 Hz, 1 H) 7.35 (d, J=3.03 Hz, 1 H) 7.14 (dd, J=8.34, 1.77 Hz, 1 H) 6.44 (d, J=3.03 Hz, 1 H) 3.78 (s, 3 H).

Reference: [1] European Journal of Organic Chemistry, 2011, # 20-21, p. 3781 - 3793
[2] Helvetica Chimica Acta, 2006, vol. 89, # 5, p. 936 - 946
[3] Patent: WO2013/25883, 2013, A1, . Location in patent: Page/Page column 41-42
[4] Journal of the American Chemical Society, 2013, vol. 135, # 30, p. 10978 - 10981
[5] ACS Medicinal Chemistry Letters, 2016, vol. 7, # 12, p. 1062 - 1067
[6] Organic Process Research and Development, 2018, vol. 22, # 11, p. 1489 - 1499
[7] Patent: EP3205650, 2017, A1, . Location in patent: Paragraph 0106; 0249; 0250
[8] Patent: US2016/244475, 2016, A1, . Location in patent: Paragraph 0278; 0279
[9] Patent: US2018/162822, 2018, A1, . Location in patent: Paragraph 0500
[10] Patent: WO2011/103546, 2011, A1, . Location in patent: Page/Page column 141-142
[11] Bioorganic and Medicinal Chemistry Letters, 2002, vol. 12, # 2, p. 125 - 128
[12] Patent: US2003/125371, 2003, A1,
[13] Patent: US6017945, 2000, A,
[14] Journal of Organometallic Chemistry, 2011, vol. 696, # 5, p. 1072 - 1083
[15] Patent: WO2011/112995, 2011, A1, . Location in patent: Page/Page column 72
[16] Organic Letters, 2012, vol. 14, # 16, p. 4130 - 4133
[17] Chemical Communications, 2012, vol. 48, # 89, p. 11023 - 11025
[18] Patent: US2014/148430, 2014, A1, . Location in patent: Paragraph 0379
[19] Organic Letters, 2016, vol. 18, # 21, p. 5496 - 5499
[20] Chemical Communications, 2017, vol. 53, # 33, p. 4593 - 4596
[21] Organic Letters, 2018, vol. 20, # 16, p. 4898 - 4901
[22] Chemistry - An Asian Journal, 2018, vol. 13, # 18, p. 2664 - 2670
[23] European Journal of Medicinal Chemistry, 2018, vol. 160, p. 120 - 132
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YieldReaction ConditionsOperation in experiment
100%
Stage #1: With sodium hydride In N,N-dimethyl-formamide at 20℃; for 0.333333 h;
Stage #2: at 20℃; for 1 h;
Example 29
Synthesis of 6-Bromo-1-methyl-1H-indole (CXLII)
To a solution of 6-bromo-1-H-indole (2.5 g, 12.8 mmol) in DMF (10 ml) was slowly added NaH (354 mg, 14.0 mmol) at room temperature.
The resulting mixture was stirred for 20 min at RT after which Mel (956 μl, 15.4 mmol) was added.
The mixture was stirred for 1 hour at room temperature and then partitioned between DCM and brine.
The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated to provide 6-Bromo-1-methyl-1H-indole CXLII in quantitative yield (2.7 g).
Reference: [1] Patent: US2007/123527, 2007, A1, . Location in patent: Page/Page column 83
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Reference: [1] Patent: US6281356, 2001, B1,
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Reference: [1] Patent: WO2005/100301, 2005, A1, . Location in patent: Page/Page column 70
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Reference: [1] European Journal of Medicinal Chemistry, 2019, vol. 161, p. 533 - 542
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