Structure of 5-Iodopyridin-2(1H)-one
CAS No.: 13472-79-2
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CAS No. : | 13472-79-2 |
Formula : | C5H4INO |
M.W : | 221.00 |
SMILES Code : | IC1=CNC(=O)C=C1 |
MDL No. : | MFCD00234058 |
InChI Key : | ZDJUNNCVIDKJAN-UHFFFAOYSA-N |
Pubchem ID : | 459500 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 8 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 39.78 |
TPSA ? Topological Polar Surface Area: Calculated from |
32.86 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.39 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.41 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
0.98 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.21 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.56 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.31 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.02 |
Solubility | 2.09 mg/ml ; 0.00947 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-0.67 |
Solubility | 47.6 mg/ml ; 0.215 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.89 |
Solubility | 0.285 mg/ml ; 0.00129 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-7.36 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.16 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | Step 1: 5-iodo-l-isopropylpyridin-2(lH)-one DME/reflux/3 hTo a stirred solution <strong>[13472-79-2]5-iodopyridin-2-ol</strong> (0.4 g, 1.80 mmol) in DME (10 mL) was added t-BuOK (0.604 g, 5.4 mmol). The mixture was stirred for 30 min at rt, K2CO3 (0.621 g, 4.5 mmol) and 2-iodopropane (0.35 mL, 3.6 mmol) were added, and the reaction was heated at reflux for about 3 h. The reaction mixture was diluted with water (30 mL) and extracted with ethyl acetate (2 x 100 mL). The combined organic extracts were washed with brine solution (10 mL), dried over Na2S04 andconcentrated under vacuum to obtain crude product. The crude product was purified by flash chromatography (silica gel, 60-120?) using 10% ethyl acetate in hexane as eluent to afford 5-iodo-l-isopropylpyridin-2(lH)-one as an off-white solid (0.41 g, 67% yield). ? NMR (400 MHz, DMSO-d6): ? 7.90 (s, 1H), 7.49 (dd, 1H), 6.21 (d, 1H), 4.94 (t, 1H), 1.25 (t, 6H), LC-MS m/z calcd for [M+H]+ 263.98, found 264.0. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium carbonate; In 1,4-dioxane-and; water; | 10a 5-(4-chloro-phenyl)-pyridin-2-ol Under an N2 atmosphere 21.7 mL 2 M Na2CO3 solution and 250 mg (0.22 mmol) tetrakis-triphenylphosphane-palladium are added to a solution of 8.0 g (21.7 mmol) <strong>[13472-79-2]5-iodo-pyridin-2-ol</strong> and 3.81 g (23.9 mmol) 4-chlorophenyl-boric acid in 120 mL 1,4-dioxane-and 30 mL dry-MeOH and the reaction mixture is stirred for 19 h at 110 C. The mixture is evaporated down i.vac., the residue is combined with water, the precipitate is filtered off, washed with water and dried at 40 C. in the circulating air dryer until a constant weight is obtained. Yield: 3.8 g (85.1% of theory). C11H8ClNO (M=205.646). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With copper(l) iodide; tetrabutyl ammonium fluoride; triethylamine;tetrakis(triphenylphosphine) palladium(0); In tetrahydrofuran; N,N-dimethyl-formamide; at 85℃; for 2.16667h; | Example 443 (S)-5-[(6-hydroxypyridin-3-yl)ethynyl]-N-[methyl(oxo)phenyl-lambda6-sulfanylidene]nicotinamideA solution of (S)-N-[methyl(oxo)phenyl-lambda6-sulfanylidene]-5-[(trimethylsilyl)ethynyl]- nicotinamide (150 mg, 0.42 mmol) and <strong>[13472-79-2]2-hydroxy-5-iodopyridine</strong> (105.4 mg, 0.46 mmol) in DMF (2.1 mL) was degassed (vacuum and argon). The resulting solution was treated tetrakis(triphenylphosphine)palladium(0) (24 mg, 0.021 mmol), triethylamine (0.08 mL, 0.55 mmol), and CuI (8 mg, 0.042 mmol). The reaction mixture was then heated to 85 0C and tetrabutylammonium fluoride (1.0 M solution in THF, 0.46 mL, 0.46 mmol) was added dropwise over 10 min. The reaction was allowed to be stirred at 85 0C for 2 hours. The reaction mixture was partitioned between EtOAc and H2O. The organic extracts and associated solid were collected and concentrated. The residue was purified by chromatography (silica gel, gradient elution MeOH-CHCl3: 1 : 100-1 :4). The product containing fractions were collected, concentrated, and the brown solid residue was triturated with a combination of MeOH and EtOAc. The resulting mixture was filtered and the filtrate allowed to stand at room temperature. The solid which precipitated from solution was collected and dried to give the title compound as a white solid (11 mg). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Example 128; l-((3-methoxyquinolin-6-yl)methyl)-5-(4-methylthiophen-2-yl)pyridin-2(lH)- one(1) 5-Iodo-l-((3-methoxyquinolin-6-yl)methyl)pyridin-2(lH)-one. To a solution of 6-(chloromethyl)-3-methoxyquinoline (0.042 g, 0.20 mmol) in DMF (8 mL) in a flame dried 25 mL round bottom flask at 0 C was added sodium hydroxide (0.011 g, 0.26 mmol). After stirred for 30 min, <strong>[13472-79-2]5-iodopyridin-2-ol</strong> (0.058 g, 0.26 mmol) was added. The ice bath was removed and the reaction mixture was stirred at rt under N2 for 20 h. The reaction was quenched with water and the resulting mixture was partitioned between EtOAc/sat. NaHCO3. The aqueous layer was extracted with EtOAc (2 x 10 mL). The combined organic <n="177"/>layers were washed with water, brine, dried over MgSO4 and concentrated. The crude product was purified using SiO2 chromatography (Teledyne Isco RediSep, P/N 68-2203-026, 12 g SiO2, isocratic 3% MeOH in DCM with 17% EtOAc, Flow = 30 mL/min). A peak at 15 min was collected. The solvent was removed in vacuo to afford the desired product as white solid (42.0 mg). MS (ESI pos. ion) m/z (M+l): 393.4. Calc'd exact mass for Ci6H13IN2O2: 392.19. 1H NMR (300 MHz, CHLOROFORM-d) delta ppm 3.95 (s, 3 H) 5.26 (s, 2 H) 6.48 (d, J=9.65 Hz, 1 H) 7.37 (d, J=2.78 Hz, 1 H) 7.41 - 7.51 (m, 2 H) 7.54 (d, J=2.19 Hz, 1 H) 7.65 (s, 1 H) 8.04 (d, J=8.48 Hz, 1 H) 8.68 (d, J=2.92 Hz, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With copper(l) iodide; potassium carbonate; In ethylene glycol; isopropyl alcohol; at 120℃; for 2h;Microwave irradiation; | Example 6a; 2-Bromo-5-isopropylsulfonyl-pyridine (Compound III-10a)Scheme ViaCompound 111-10a Method F-lStep 1: 5-Isopropylsulfanylpyridin-2-ol[00160] <strong>[13472-79-2]5-iodopyridin-2-ol</strong> (1 g, 4.525 mmol) , propane-2-thiol (689.3 mg, 840.6 mu, 9.050 mmol) , ethylene glycol (842.9 mg, 757.3 mu, 13.58 mmol) , Cul (172.4 mg, 0.9050 mmol) and potassium carbonate (1.877 g, 13.58 mmol) in IPA (7 mL) were heated under microwave conditions at 120 C for 2 hours. The mixture was filtered through celite washing with DCM and the filtrate concentrated in vacuo . The residue was purified by column chromatography (ISCO Companion, 40 g column, elueting with 0 to 100%EtO Ac/Petroleum Ether, loaded in DCM). The fractions were combined and concentrated in vacuo and the residue redissolved in EtO Ac (10 mL) and stirred with 0.5 g of 3- Mercaptopropyl ethyl sulfide Silica for 45 minutes. The silica was removed by filtration and the solvent removed in vacuo to give the sub-title compound as a beige oil which was used without further purification. |
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