Structure of 141179-72-8
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 141179-72-8 |
Formula : | C8H4F4O2 |
M.W : | 208.11 |
SMILES Code : | O=C(O)C1=CC=C(F)C=C1C(F)(F)F |
MDL No. : | MFCD00040982 |
InChI Key : | JUHPDXOIGLHXTC-UHFFFAOYSA-N |
Pubchem ID : | 688255 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 14 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.12 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 6.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 38.36 |
TPSA ? Topological Polar Surface Area: Calculated from |
37.3 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.32 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.43 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
4.12 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
3.09 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.69 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.73 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.85 |
Solubility | 0.296 mg/ml ; 0.00142 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.86 |
Solubility | 0.29 mg/ml ; 0.00139 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-2.94 |
Solubility | 0.237 mg/ml ; 0.00114 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.84 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.6 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91.3% | With oxalyl dichloride; In dichloromethane; at 0 - 25℃; for 0.5h; | General procedure: The purchased acids (14.40 mmol) was added into 5 mL DCM andcooled to 0 C. After the oxalyl chloride (1.50 mL, 17.30 mmol) was added drop wise, the mixture was removed to room temperature and stirred for 30 min. The solvent was evaporated for use.To a cooled solution of 5 (3.70 g, 17.30 mmol) in 20 mL DCM wasadded Et3N (3.00 mL, 21.60 mmol) then the prepared chloride wasadded drop wise. The mixture was stirred at room temperature for 1 h.The solvent was evaporated under reduced pressure and the residuewas purification by column chromatography with dichloromethane/methanol as eluent on silica gel to give the derivatives7a-7h.4.1.3.1. Tert-butyl-4-(4-fluoro-N-methyl-2-(trifluoromethyl) benzamido)piperidine-1-carboxylate (7a). Colorless oil, yield: 91.3%. Majorrotamer: 1H NMR (300 MHz, CDCl3) delta (ppm): 7.44-7.39 (m, 1H,ArH), 7.32-7.29 (m, 2H, ArH), 4.73 (m, 1H, CH3NCH), 4.25 (m, 2H,BocNCH2), 2.88-2.82 (m, 2H, BocNCH2), 2.63 (s, 3H, NCH3), 1.79-1.63(m, 4H, CH3N(CH2)2), 1.46 (s, 9H, Boc-H). Minor rotamer: 1H NMR(300 MHz, CDCl3) delta (ppm): 7.44-7.39 (m, 1H, ArH), 7.32-7.29 (m, 2H,ArH), 4.15-4.11 (m, 2H, BocNCH2), 3.23 (s, 1H, CH3NCH), 2.98 (s, 3H,NCH3), 2.51-2.35 (m, 2H, BocNCH2), 1.79-1.63 (m, 4H, CH3N(CH2)2),1.43 (s, 9H, Boc-H). |
With thionyl chloride; for 2h;Heating / reflux; | 4-Fluoro-2- (trifluoromethyl) benzoic acid (2. 0G) was dissolved in thionyl chloride (20ML) and heated at reflux for 2h. The reaction was then cooled and evaporated (co- evaporated with DCM x 3) and then dissolved in DCM (50ML). This solution was added slowly to 1-tert-butoxy-carbonylpiperazine (1.62g), and TEA (2. 54ML), dissolved in DCM (50ML). The reaction was then stirred at rt for 2h before being washed with 1 N HCI (2X100M1), saturated sodium hydrogen carbonate (2X100ML) and brine (50ML). The organic layer was dried (MgSO4) and evaporated to give the title compound (D23) (3. 09G). | |
With oxalyl dichloride; N,N-dimethyl-formamide; In hexane; dichloromethane; at 20℃; for 18h; | REFERENCE EXAMPLE 1 (4-Fluoro-2-trifluoromethyl-phenyl)-(5H,11H-pyrrolo[2,1-c] [1,4]benzodiazepin-10-yl)-methanone oxalyl chloride (2.0 g) was added to a suspension of <strong>[141179-72-8]4-fluoro-2-trifluoromethylbenzoic acid</strong> (2.0 g) in dichloromethane (25 ml).. Two drops of dimethylformamide were added and the mixture was stirred for 18 hours at room temperature.. The resultant solution was evaporated to dryness to give the crude acid chloride.. This was redissolved in dichloromethane and filtered.. Evaporation of this material gave a liquid which was then redissolved in hexane, filtered, and evaporated to yield the acid chloride as a pale yellow viscous liquid, which was used without further purification. The acid chloride (2.26 g) in dichloromethane (25 ml) was added portionwise to a mixture of 10,11-dihydro-5H-pyrrolo[2,1-c][1,4]benzodiazepine (1.66 g), dichloromethane (10 ml), and diisopropylethylamine (1.30 g), cooled in an ice bath.. After remaining at room temperature for 18 hours, the reaction mixture was washed with water and saturated aqueous sodium bicarbonate.. The dichloromethane solution was dried over anhydrous sodium sulfate and filtered through a short column of hydrous sodium magnesium silicate and further eluted with several volumes of dichloromethane.. The combined organic phase was concentrated on a hot plate with the gradual addition of hexane until crystallization occurred.. After cooling, the crystals were collected by filtration to yield 2.57 g of the title compound, m.p. 154-155 C. |
With oxalyl dichloride; N,N-dimethyl-formamide; In dichloromethane;Heating / reflux; | A suspension of <strong>[141179-72-8]2-trifluoromethyl-4-fluorobenzoic acid</strong> (16.85 g, 81 mmol) in dichloromethane (150 mL) containing a few drops of dimethylformamide was treated dropwise under nitrogen with oxalyl chloride (8.5 mL, 97.4 mmol). After the gas evolution subsided, the reaction mixture was refluxed for an additional 10 minutes, and then evaporated to dryness in vacuo. The crude acid chloride was used as such in the next step | |
With oxalyl dichloride;N,N-dimethyl-formamide; In dichloromethane; at 20℃; for 18h; | Oxalyl chloride (2.0 g) was added to a suspension of <strong>[141179-72-8]4-fluoro-2-trifluoromethylbenzoic acid</strong> (2.0 g) in dichloromethane (25 ml). Two drops of dimethylformamide were added and the mixture was stirred for 18 hours at room temperature. The resultant solution was evaporated to dryness to give the crude acid chloride. This was redissolved in dichloromethane and filtered. Evaporation of this material gave a liquid which was then redissolved in hexane, filtered, and evaporated to yield the acid chloride as a pale yellow viscous liquid, which was used without further purification. | |
With oxalyl dichloride;N,N-dimethyl-formamide; In dichloromethane; at 20℃; for 3h; | Preparation Example 11 DMF (3 drops) and oxalyl chloride (2.55 ml) were added to a mixture of <strong>[141179-72-8]4-fluoro-2-(trifluoromethyl)benzoic acid</strong> (5.50 g) and dichloromethane (50 ml), followed by stirring at room temperature for 3 hours. The reaction solution was added dropwise to a 2M methylamine-THF solution (17.3 ml) and a solution of triethylamine (5.55 ml) in dichloromethane (50 ml) under ice cooling, followed by stirring for 30 minutes and concentration under reduced pressure, addition of water and extraction with ethyl acetate. The organic layer was washed with water, saturated aqueous sodium bicarbonate solution and then saturated brine in this order, and dried over anhydrous magnesium sulfate, and the solvent was evaporated under reduced pressure. The residue was washed with diisopropylether to obtain 4-fluoro-N-methyl-2-(trifluoromethyl)benzamide (4.37 g) as a white solid. | |
With thionyl chloride; N,N-dimethyl-formamide; In ethyl acetate; at 70℃; for 3h; | 4-Fluoro-2-(trifluoromethyl)benzoic acid (150 g), ethyl acetate (1200 mL), N,N-dimethylformamide (2.78 mL), and thionyl chloride (78.9 mL) were mixed, followed by stirring at 70 C for 3 hours. The solvent of this reaction mixture was evaporated under reduced pressure to obtain a residue containing 4-fluoro-2-(trifluoromethyl)benzoyl chloride. To the obtained residue were added acetonitrile (450 mL) and pyridine (291 mL), and 2-propanol (450 mL) was added dropwise thereto, followed by stirring at room temperature for 30 minutes. This mixture was subjected to a liquid separation operation by addition of toluene (600 mL) and water (600 mL), followed by extraction by addition of toluene (600 mL) to the aqueous layer. The obtained organic layers were combined, washed with 3 M hydrochloric acid (1200 mL), and then further washed with a solution of sodium chloride (150 g) and water (900 mL), and the solvent was evaporated therefrom under reduced pressure to obtain isopropyl 4-fluoro-2-(trifluoromethyl)benzoate (165 g) in a yield of 91.5%. 1H-NMR (CDCl3): 1.37 (6H, d, J = 6.0 Hz), 5.20-5.30 (1H, m), 7.28-7.31 (1H, m), 7.44 (1H, dd, J = 2.4, 9.2 Hz), 7.82 (1H, dd, J = 5.6, 8.8 Hz) | |
With oxalyl dichloride; N,N-dimethyl-formamide; In dichloromethane; at 0 - 20℃; for 0.5h; | 2-Trifluoromethyl-4-fluorobenzoic acid (VII-1) (3.00 g, 14.40 mmol) was dissolved in dichloromethane (5.00 mL).Add 2 drops of DMF and cool to 0 C.Add oxalyl chloride (1.50 ml, 17.30 mmol),Displaced at room temperature for 30 min,The dichloromethane was spun dry to give the acid chloride. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With boron trifluoride diethyl etherate; In tetrahydrofuran; at 0 - 20℃; for 18h; | Reference example 1 tert-Butyl 4-fluoro-2-trifluoromethylbenzoate To a solution of <strong>[141179-72-8]4-fluoro-2-trifluoromethylbenzoic acid</strong> (5.00 g) in tetrahydrofuran (72.0 mL) were successively added tert-butyl 2,2,2-trichloroacetoimidate (8.18mL) and boron trifluoride diethyl ether complex (0.304 mL) under ice-cooling, and the reaction mixture was stirred at room temperature for 18 hours. To the reaction mixture was added 1 mol/L aqueous solution of sodium hydroxide and the mixture was extracted with ethyl acetate. The organic layer was washed with 1 mol/L aqueous solution of sodium hydroxide, water, brine, and dried over anhydrous magnesium sulfate. After filtration, the filtrate was concentrated under reduced pressure. To this residue were added diisopropyl ether-hexane and the insoluble was removed by filtration. This filtrate was concentrated under reduced pressure. The obtained crude product was purified by column chromatography on silica gel (eluent:ethyl acetate-hexane) to give tert-butyl 4-fluoro-2-trifluoromethylbenzoate (3.13 g). 1H-NMR(CDCl3) delta ppm: 1.58 (9H, s), 7.20-7.30 (1H, m), 7.35-7.45 (1H, m), 7.75-7.85 (1H, m). |
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