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CAS No. : | 25462-85-5 | MDL No. : | MFCD00052830 |
Formula : | C7H6ClNO2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | ZGZMEKHQIZSZOH-UHFFFAOYSA-N |
M.W : | 171.58 | Pubchem ID : | 141209 |
Synonyms : |
|
Num. heavy atoms : | 11 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.14 |
Num. rotatable bonds : | 1 |
Num. H-bond acceptors : | 3.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 41.17 |
TPSA : | 50.19 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.11 cm/s |
Log Po/w (iLOGP) : | 1.3 |
Log Po/w (XLOGP3) : | 1.74 |
Log Po/w (WLOGP) : | 1.74 |
Log Po/w (MLOGP) : | -0.18 |
Log Po/w (SILICOS-IT) : | 1.82 |
Consensus Log Po/w : | 1.28 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.56 |
Log S (ESOL) : | -2.34 |
Solubility : | 0.789 mg/ml ; 0.0046 mol/l |
Class : | Soluble |
Log S (Ali) : | -2.41 |
Solubility : | 0.666 mg/ml ; 0.00388 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -2.4 |
Solubility : | 0.688 mg/ml ; 0.00401 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 1.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.62 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H315-H317-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
2 g | at -5 - 20℃; for 24 h; Inert atmosphere | General procedure: To a stirred solution of POCl3 (10 mL, 107 mmol) was added acid 2 (2.37 g, 15.5 mmol), and the resulting solution was heated to reflux for 18 h. The excess POCl3 was removed under reduced pressure, the residue was cooled to -5°C, methanol (20 mL) was added drop wise, and the resulting mixture was stirred for 24 h at rt. Distilled off MeOH completely, neutralized with solid NaHCO3, and partitioned between H2O (30 mL) and EtOAc (30 mL). The aqueous layer was extracted with EtOAc, dried (Na2SO4), and the solvent was removed under reduced pressure. The crude product was purified by flash chromatography over silica gel (CH2Cl2), to give ester 3a (2 g, 10.8 mmol, 69percent yield) as a white solid. Rf (Silica gel, CH2Cl2): 0.66; 1H NMR (300 MHz, CDCl3) δ 2.59 (s, 3H), 3.94 (s, 3H), 7.61(s, 1H), 7.67 (s, 1H); 13C NMR (75 MHz, CDCl3) δ 24.2, 52.9, 120.8, 121.2, 140.3, 151.4, 160.5, 164.6; MS (EI, 70ev): m/z (percent) [M+H]+. 186 (100). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | at 0 - 80℃; | Step 1: Ethyl 2-chloro-6-methylisonicotinate (97). To a stirred solution of 96 (7.0 g, 40.79 mmol) in ethanol (70 mL) was added conc H2SO4 (2 mL) at 0° C. dropwise followed by heating at 80° C. for 12 h. The reaction mixture was cooled to room temperature and concentrated in vacuo. The resulting residue was diluted with ethyl acetate and washed with water, sodium bicarbonate solution and sat. NaCl. The organic layer was dried over anhydrous Na2SO4 and concentrated to afford 97 (7 g, 86percent) as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
86% | With sulfuric acid; at 0 - 80℃; | Step 1: Ethyl 2-chloro-6-methylisonicotinate (97). To a stirred solution of 96 (7.0 g, 40.79 mmol) in ethanol (70 mL) was added conc H2SO4 (2 mL) at 0 C. dropwise followed by heating at 80 C. for 12 h. The reaction mixture was cooled to room temperature and concentrated in vacuo. The resulting residue was diluted with ethyl acetate and washed with water, sodium bicarbonate solution and sat. NaCl. The organic layer was dried over anhydrous Na2SO4 and concentrated to afford 97 (7 g, 86%) as a white solid. |
a) A solution of 2-chloro-6-methylisonicotinic acid (15.5 g, 90.3 mmol, 1 equivalent) in EtOH (200 ml.) and a few drops of concentrated sulfuric acid is stirred at 75C for 24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (200 ml.) and washed with a solution of sat. aq. NaHCO3 (70 ml.) and water (2x70 ml_). The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6-methylisonicotinic acid ethyl ester (16.3 g) as a pink powder; LC-MS: tR = 0.92 min, [M+1]+ = 200.17. | ||
A solution of 2-chloro-6-methylisonicotinic acid (15.5 g, 90.3 mmol, 1 eq.) in ethanol (200 mL) and a few drops of concentrated sulfuric acid is stirred at 75C for24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (200 mL) and washed with a solution of sat. aq. NaHCO3 (70 mL) and water (2x70 mL). <n="40"/>The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6- methylisonicotinic acid ethyl ester (16.3 g) as a pink powder; LC-MS: tR = 0.92 min, [M+1]+ = 200.17; A solution of 2-chloro-6-methyl-isonicotinic acid (15.5 g, 90.3 mmol) in ethanol (200 mL) and H2SO4 (0.5 mL) is stirred at 75C for 24 h. The solvent is evaporated and the residue is dissolved in EA (200 mL). The solution is washed with sat. aq. NaHCO3-solution (70 mL) and water (70 mL), dried over MgSO4, filtered, concentrated and dried under HV to give 2-chloro-6-methyl-isonicotinic acid ethyl ester (16.3 g) as a pink powder; LC-MS: tR = 0.92 min; [M+1]+ = 200.17. |
A solution of 2-chloro-6-methylisonicotinic acid (15.5 g, 90.3 mmol, 1 equivalent) in EtOH (200 mL) and a few drops of concentrated sulfuric acid is stirred at 75 C. for 24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (200 mL) and washed with a solution of sat. aq. NaHCO3 (70 mL) and water (2×70 mL). The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6-methylisonicotinic acid ethyl ester (16.3 g) as a pink powder; LC-MS: tR=0.92 min, [M+1]+=200.17. | ||
a) To a solution of 2-chloro-6-methylisonicotinic acid (50 g, 291.4 mmol) in ethanol (750 mL), a few drops of concentrated sulfuric acid are added and the mixture is stirred at 75 C. for 24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (300 mL) and washed with a solution of sat. aq. NaHCO3 (100 mL) followed with brine (2*70 mL). The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6-methylisonicotinic acid ethyl ester (54.9 g) as a white solid after recrystallization from heptane; LC-MS: tR=0.92 min, [M+1]+=200.17. | ||
a) Concentrated H2SO4 (1.16 mL, 21.6 mmol) is added dropwise to a suspension of 2-chloro-6-methylpyridine-4-carboxylic acid (11.58 g, 67.49 mmol) in ethanol (100 mL). The reaction mixture is then stirred at 70 C. for 24 h. Sat. NaHCO3 is added slowly to reach pH 8 and the aq. solution is extracted with EA three times. The org. extracts are collected, dried over MgSO4, filtered and evaporated to give 2-chloro-6-methylpyridine-4-carboxylic acid ethyl ester (11.81 g) as an off white solid; LC-MS: tR=0.91 min, [M+H]+=199.93. | ||
With sulfuric acid; In ethanol; at 75℃; for 24h;Product distribution / selectivity; | a) A solution of 2-chloro-6-methylisonicotinic acid (15.5 g, 90.3 mmol, 1 eq.) in ethanol (200 mL) and a few drops of concentrated sulfuric acid is stirred at 75 C. for 24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (200 mL) and washed with a solution of sat. aq. NaHCO3 (70 mL) and water (2*70 mL). The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6-methylisonicotinic acid ethyl ester (16.3 g) as a pink powder; LC-MS: tR=0.92 min, [M+1]+=200.17. | |
To a solution of 2-chloro-6-methylisonicotinic acid (50 g, 291.4 mmol) in ethanol (750 ml_), a few drops of concentrated sulfuric acid are added and the mixture is stirred at 75C for 24 h. The solvent is evaporated and the residue is dissolved in ethyl acetate (300 ml.) and washed with a solution of sat. aq. NaHCO3 (100 ml.) followed with brine (2x70 ml_). The org. extract is dried over MgSO4, filtered and evaporated to give 2-chloro-6- methylisonicotinic acid ethyl ester (54.9 g) as a white solid after recrystallization from heptane; LC-MS: tR = 0.92 min, [M+1]+ = 200.17. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a solution of K-tert.-butylate (1.99 g, 17.7 mmol) in EtOH (25 ml_), 2-chloro-6-methyl- isonicotinic acid is added. The reaction mixture is stirred at 900C for 7 days. The mixture is cooled to rt, diluted with water and extracted with ether (3x50 ml_). The aq. phase is acidified by adding 1 N aq. HCI and is then extracted three more times with ether (3x30 ml_). The org. extracts are combined, dried over Na2SO4, filtered and concentrated. The crude product is purified by CC on silica gel eluting with heptane:EA 1 :1 to give 2-ethoxy-6- methyl-isonicotinic acid (237 mg) as a white powder, LC-MS: tR = 0.60 min; [M+1]+ = 182.24; 1H NMR (CD3OD): delta 7.27 (s, 1 H), 7.04 (s, 1 H), 4.33 (q, J = 7.0 Hz, 2 H), 2.46 (s, 3 H), 1.37 (t, J = 7.0 Hz, 3 H). | ||
To a solution of K-tert.-butylate (1.99 g, 17.7 mmol) in ethanol (25 ml_), 2-chloro-6- methyl-isonicotinic acid is added. The reaction mixture is stirred at 900C for 7 days. The mixture is cooled to rt, diluted with water and extracted with diethyl ether (3x50 ml_). The aq. phase is acidified by adding 1 N aq. HCI and is then extracted three more times with diethyl ether (3x30 ml_). The org. extracts are combined, dried over Na2SO4, filtered and concentrated. The crude product is purified by CC on silica gel eluting with heptane:EA 1 :1 to give 2-ethoxy-6-methyl-isonicotinic acid (237 mg) as a white powder, LC-MS: tR = 0.60 min; [IVM]+ = 182.24; 1H NMR (CD3OD): delta 7.27 (s, 1 H), 7.04 (s, 1 H), 4.33 (q, J = 7.0 Hz, 2 H), 2.46 (s, 3 H), 1.37 (t, J = 7.0 Hz, 3 H). | ||
To a solution of K-tert.-butylate (1.99 g, 17.7 mmol) in EtOH (25 mL), 2-chloro-6-methyl-isonicotinic acid is added. The reaction mixture is stirred at 90 C. for 7 days. The mixture is cooled to rt, diluted with water and extracted with ether (3×50 mL). The aq. phase is acidified by adding 1 N aq. HCl and is then extracted three more times with ether (3×30 mL). The org. extracts are combined, dried over Na2SO4, filtered and concentrated. The crude product is purified by CC on silica gel eluting with heptane:EA 1:1 to give 2-ethoxy-6-methyl-isonicotinic acid (237 mg) as a white powder, LC-MS: tR=0.60 min; [M+1]+=182.24; 1H NMR (CD3OD): delta 7.27 (s, 1H), 7.04 (s, 1H), 4.33 (q, J=7.0 Hz, 2H), 2.46 (s, 3H), 1.37 (t, J=7.0 Hz, 3H). |
With potassium tert-butylate; at 90℃; for 168h; | To a solution of K-tert.-butylate (1.99 g, 17.7 mmol) in ethanol (25 mL), 2-chloro-6-methyl-isonicotinic acid is added. The reaction mixture is stirred at 90 C. for 7 days. The mixture is cooled to rt, diluted with water and extracted with diethyl ether (3*50 mL). The aq. phase is acidified by adding 1 N aq. HCl and is then extracted three more times with diethyl ether (3*30 mL). The org. extracts are combined, dried over Na2SO4, filtered and concentrated. The crude product is purified by CC on silica gel eluting with heptane:EA 1:1 to give 2-ethoxy-6-methyl-isonicotinic acid (237 mg) as a white powder, LC-MS: tR=0.60 min; [M+1]+=182.24; 1H NMR (CD3OD): delta 7.27 (s, 1H), 7.04 (s, 1H), 4.33 (q, J=7.0 Hz, 2H), 2.46 (s, 3H), 1.37 (t, J=7.0 Hz, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sulfuric acid; at 20 - 90℃; for 52h; | a) To a suspension of 2-chloro-6-methyl-isonicotinic acid (20.0 g, 1 17 mmol) in isopropanol (80 ml_), H2SO4 (5 ml.) is added dropwise. The mixture becomes warm (400C). The mixture is stirred for 24 h at rt, then at 900C for 28 h before the solvent is removed in vacuo. The residue is dissolved in ether (200 ml_), washed with sat. aq. NaHCO3-solution (3x50 ml.) followed by brine (3x50 ml_), dried over Na2SO4, filtered and concentrated to give 2-chloro- 6-methyl-isonicotinic acid isopropyl ester (21.0 g) as a colourless oil which slowly crystallises; LC-MS: tR = 0.97 min, [M+1]+ = 214.05. | |
To a suspension of 2-chloro-6-methyl-isonicotinic acid (20.0 g, 117 mmol) in isopropanol (80 ml_), H2SO4 (5 ml_) is added dropwise. The mixture becomes warm (400C). The mixture is stirred for 24 h at rt, then at 900C for 28 h before the solvent is removed in vacuo. The residue is dissolved in diethyl ether (200 ml_), washed with sat. aq. NaHCO3-solution (3x50 ml_) followed by brine (3x50 ml_), dried over Na2SO4, filtered and concentrated to give 2-chloro-6-methyl-isonicotinic acid isopropyl ester (21.0 g) as a colourless oil which slowly crystallises; LC-MS: tR = 0.97 min, [M+1]+ = 214.05. | ||
To a suspension of 2-chloro-6-methyl-isonicotinic acid (20.0 g, 117 mmol) in isopropanol (80 mL), H2SO4 (5 mL) is added dropwise. The mixture becomes warm (40 C.). The mixture is stirred for 24 h at rt, then at 90 C. for 28 h before the solvent is removed in vacuo. The residue is dissolved in ether (200 mL), washed with sat. aq. NaHCO3-solution (3×50 mL) followed by brine (3×50 mL), dried over Na2SO4, filtered and concentrated to give 2-chloro-6-methyl-isonicotinic acid isopropyl ester (21.0 g) as a colourless oil which slowly crystallises; LC-MS: tR=0.97 min, [M+1]+=214.05. |
With sulfuric acid; at 20 - 90℃; for 52h; | a) To a suspension of 2-chloro-6-methyl-isonicotinic acid (20.0 g, 117 mmol) in isopropanol (80 mL), H2SO4 (5 mL) is added dropwise. The mixture becomes warm (40 C.). The mixture is stirred for 24 h at rt, then at 90 C. for 28 h before the solvent is removed in vacuo. The residue is dissolved in diethyl ether (200 mL), washed with sat. aq. NaHCO3-solution (3*50 mL) followed by brine (3*50 mL), dried over Na2SO4, filtered and concentrated to give 2-chloro-6-methyl-isonicotinic acid isopropyl ester (21.0 g) as a colourless oil which slowly crystallises; LC-MS: tR=0.97 min, [M+1]+=214.05. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In dichloromethane; at 20℃; for 1h; | a) A solution of 2-chloro-6-methyl-isonicotinic acid (227 mg, 1.33 mmol), PyBOP (700 mg, 1.34 mmol), DIPEA (860 mg, 6.64 mmol), and 4-allyloxy-N-hydroxy-3,5-dimethyl- benzamidine (410 mg, 1.86 mmol) in DCM (7 ml.) is stirred at rt for 1 h. The mixture is diluted with ether, washed with 1 N aq. HCI (2x25 ml_), 1 N aq. KHSO4 solution (2x25 ml.) and brine (25 ml_), dried over Na2SO4, filtered and concentrated. The crude product is purified by MPLC on silica gel eluting with a gradient of EA in heptane to give 2-chloro-6- methyl-isonicotinic acid (4-allyloxy-N-hydroxy-3,5-dimethyl-benzamidine) ester (142 mg) as a colourless resin; LC-MS: tR = 1.04 min, [M+1]+ = 374.10. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
2 g | at -5 - 20℃; for 24h;Inert atmosphere; | General procedure: To a stirred solution of POCl3 (10 mL, 107 mmol) was added acid 2 (2.37 g, 15.5 mmol), and the resulting solution was heated to reflux for 18 h. The excess POCl3 was removed under reduced pressure, the residue was cooled to -5°C, methanol (20 mL) was added drop wise, and the resulting mixture was stirred for 24 h at rt. Distilled off MeOH completely, neutralized with solid NaHCO3, and partitioned between H2O (30 mL) and EtOAc (30 mL). The aqueous layer was extracted with EtOAc, dried (Na2SO4), and the solvent was removed under reduced pressure. The crude product was purified by flash chromatography over silica gel (CH2Cl2), to give ester 3a (2 g, 10.8 mmol, 69percent yield) as a white solid. Rf (Silica gel, CH2Cl2): 0.66; 1H NMR (300 MHz, CDCl3) delta 2.59 (s, 3H), 3.94 (s, 3H), 7.61(s, 1H), 7.67 (s, 1H); 13C NMR (75 MHz, CDCl3) delta 24.2, 52.9, 120.8, 121.2, 140.3, 151.4, 160.5, 164.6; MS (EI, 70ev): m/z (percent) [M+H]+. 186 (100). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In toluene; at 65 - 80℃; for 49h; | N, N-DIMETHYLFORMAMIDE-DI-TERT.-BUTYL-ACETAL (19 mL, 80 MMOL) is added during 40 min to a hot (65C, flask temperature) suspension of 2-chloro-6-methyl-isonicotinic acid (3.40 g, 19. 8 MMOL) in dry toluene (100 mL). The clear orange solution is stirred at 80C for 48 h, cooled to r. t. and diluted with toluene (100 mL). The solution is washed with water (2 x 40 mL), sat. aq. NAHCO3 (3 x 30 mL) and sat. aq. NACF (25 mL), dried (NA2SO4), filtered and evaporated. The residue is purified by FC (SI02, CH2CI2-MeOH) to provide the title compound. | |
In chloroform; for 4.5h;Heating / reflux; | A solution of 5.0 g (29 mmol) of 2-chloro-6-methyl-isonicotinic acid in 50 ml of chloroform is heated to reflux. 14 ml (58 mmol, 2 eq) of di-tert-butoxymethyl-dimethyl-amine are added dropwise over 30 min. After a reaction time of 1.5 h and 3.5 h, further portions of di-tert- butoxymethyl-dimethyl-amine (each time 14 ml, 58 mmol, 2 eq) are added. After a reaction time of 4.5 h, the reaction mixture is cooled to rt and diluted with EtOAc. The organic layer is washed with aq sodium bicarbonate and then brine, dried over magnesium sulfate, filtered and concentrated. The residue is purified by chromatography on silica (flashmaster, hexane to hexane/EtOAc 95/5) to give the product in the form of a white solid.Rf (DCM/methanol = 95:5): 0.36.MS (LC / MS): 172/174 = [M + H - tert-butylf.1H-NMR (400 MHz, CDCI3): 7.65 (s, 1H), 7.60 (s, 1H), 2.63 (s, 3H), 1.63 (s, 9H). | |
In toluene; at 80℃; for 92h; | a) A suspension of 2-chloro-6-methyl-isonicotinic acid (7.0 g, 40.9 mmol) in toluene (100 mL) is heated to 800C and then slowly treated with N,N-dimethylformamide di-tert. butylacetal (21.2 g, 104.3 mmol). The mixture becomes clear. Heating and stirring is continued for 20 h before another portion N,N-dimethylformamide di-tert. butylacetal (8.32 g, 40.9 mmol) is added. Stirring is continued at 80C for 72 h. The reaction mixture is cooled to rt, diluted with ether and washed with sat. aq. Na2CO3-solution. The org. extract is dried over MgSO4, filtered and the solvent is carefully evaporated. The crystalline material that formed is collected, carefully washed with cold heptane and dried to give 2-chloro-6- methyl-isonicotinic acid tert.-butyl ester (6.29 g) as colourless fine needles; LC-MS: tR = 1.01 min, [M+1]+ = 228.11 ; 1H NMR (CDCI3): delta 7.61 (s, 1 H), 7.56 (s, 1 H), 2.59 (s, 3H), 1.29 (s, 9H). |
In chloroform; for 5h;Heating / reflux;Product distribution / selectivity; | A solution of 5.0 g (29 mmol) <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> in 50 ml chloroform is heated to reflux temperature. 14 ml (58 mmol, 2 eq) Di-tert-butoxymethyl-dimethyl-amine are added dropwise over 30 min. After 1.5 h and 3.5 h reaction time another portion of di-tert-butoxymethyl-dimethyl-amine (each time 14 ml, 58 mmol, 2 eq) is added. After 4.5 h the reaction mixture is cooled to rt, diluted with EtOAc, washed with aqueous bicarbonate and brine and dried over magnesium sulfate. The product is purified by chromatography on silica (flashmaster, hexane to hexane/EtOAc 95/5) to give a white solid.Rf: (DCM/methanol=95:5): 0.36MS (LC/MS): 172/174=[M+H-tBu]+ 1H-NMR (400 MHz, CDCl3): 7.65 (s, 1H), 7.60 (s, 1H), 2.63 (s, 3H), 1.63 (s, 9H).; Building block A6: 2-But-3-enyl-6-methyl-isonicotinic acid hydrochloridea) <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> tert-butyl esterA suspension of 5.00 g (29.1 mmol) 2-chloro-6-methyl-isonicotinic acid in chloroform is heated to reflux and 14.0 ml (58.3 mmol, 2 eq) N,N-dimethylformamide-di-tert-butylacetal are added over a period of 30 min. After 1.5 h and 3.5 h another portion of each time 5 ml (20.8 mmol, 0.7 eq) N,N-dimethylformamide-di-tert-butylacetal is added. After 4.5 h the mixture is cooled to rt, diluted with EtOAc, washed with aq. bicarbonate and brine, dried over sodium sulfate and the solvents are evaporated at reduced pressure. The residue is purified by chromatography on silica (flashmaster, hexane to hexane/EtOAc 95/5) to give the product in the form of a white solid.MS (LC/MS): 172=[M+H-tBu]+ 1H-NMR (400 MHz, CDCl3): 7.65 (s, 1H), 7.60 (s, 1H), 2.63 (s, 3H), 1.63 (s, 9H). | |
In toluene; at 65 - 80℃; for 48.6667h; | a) N,N-dimethylformamide-di-tert.-butyl-acetal (19 mL, 80 mmol) is added during 40 min to a hot (65 C., flask temperature) suspension of 2-chloro-6-methyl-isonicotinic acid (3.40 g, 19.8 mmol) in dry toluene (100 mL). The clear orange solution is stirred at 80 C. for 48 h, cooled to rt and diluted with toluene (100 mL). The solution is washed with water (2×40 mL), sat. aq. NaHCO3 (3×30 mL) and sat. aq. NaCl (25 mL), dried (Na2SO4), filtered and evaporated. The residue is purified by FC (SiO2, DCM-MeOH) to give 2-chloro-6-methyl-isonicotinic acid tert-butyl ester. | |
In toluene; at 20 - 80℃; for 75 - 92h;Product distribution / selectivity; | A suspension of 2-chloro-6-methyl-isonicotinic acid (7.0 g, 40.9 mmol) in toluene (100 mL) is heated to 80C and then slowly treated with N,N-dimethylformamide di- tert. butylacetal (21.2 g, 104.3 mmol). The mixture becomes clear. Heating and stirring is continued for 20 h before another portion N,N-dimethylformamide di-tert. butylacetal (8.32 g, 40.9 mmol) is added. Stirring is continued at 800C for 72 h. The <n="39"/>reaction mixture is cooled to rt, diluted with diethyl ether and washed with sat. aq. Na2CO3-solution. The org. extract is dried over MgSO4, filtered and the solvent is carefully evaporated. The crystalline material that forms is collected, carefully washed with cold heptane and dried to give 2-chloro-6-methyl-isonicotinic acid tert- butyl ester (6.29 g) as colourless fine needles; LC-MS: tR = 1.01 min; [M+1]+ = 228.11 ; 1H NMR (CDCI3): delta 7.61 (s, 1 H), 7.56 (s, 1 H), 2.59 (s, 3H), 1.29 (s, 9H); <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (7.55 g, 44.0 mmol) is suspended in toluene (150 mL) at 800C and then treated with N,N-dimethylformamide di-tert. -butyl acetal (50 mL, 209 mmol). The mixture is stirred at 80C for 3 h, then at rt for 72 h. The clear solution is diluted with diethyl ether (250 mL), washed with sat. aq. NaHCO3 solution (4x50 mL), dried over MgSO4, filtered and concentrated. The crude product is purified by MPLC on silica gel eluting with heptane:ethyl acetate to give 2-chloro- 6-methyl-isonicotinic acid tert. -butyl ester (8.57 g) as a brownish oil which slowly solidifies; LC-MS: tR = 0.99 min; [M+H]+ = 213.24 (-15); 1H NMR (D6-DMSO): £1.56 (s, 9 H), 2.54 (s, 3 H), 7.59 (s, 1 H), 7.66 (s, 1 H). | |
In toluene; at 80℃; | A suspension of 2-chloro-6-methyl-isonicotinic acid (7.0 g, 40.9 mmol) in toluene (100 mL) is heated to 80 C. and then slowly treated with N,N-dimethylformamide di-tert. butylacetal (21.2 g, 104.3 mmol). The mixture becomes clear. Heating and stirring is continued for 20 h before another portion N,N-dimethylformamide di-tert. butylacetal (8.32 g, 40.9 mmol) is added. Stirring is continued at 80 C. for 72 h. The reaction mixture is cooled to rt, diluted with ether and washed with sat. aq. Na2CO3-solution. The org. extract is dried over MgSO4, filtered and the solvent is carefully evaporated. The crystalline material that formed is collected, carefully washed with cold heptane and dried to give 2-chloro-6-methyl-isonicotinic acid tert.-butyl ester (6.29 g) as colourless fine needles; LC-MS: tR=1.01 min, [M+1]+=228.11; 1H NMR (CDCl3): delta 7.61 (s, 1H), 7.56 (s, 1H), 2.59 (s, 3H), 1.29 (s, 9H). | |
In toluene; at 20 - 80℃; for 75h; | a) <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (7.55 g, 44.0 mmol) is suspended in toluene (150 mL) at 80 C. and then treated with N,N-dimethylformamide di-tert.-butyl acetal (50 mL, 209 mmol). The mixture is stirred at 80 C. for 3 h, then at rt for 72 h. The clear solution is diluted with diethyl ether (250 mL), washed with sat. aq. NaHCO3 solution (4×50 mL), dried over MgSO4, filtered and concentrated. The crude product is purified by MPLC on silica gel eluting with heptane:ethyl acetate to give 2-chloro-6-methyl-isonicotinic acid tert.-butyl ester (8.57 g) as a brownish oil which slowly solidifies; LC-MS: tR=0.99 min, [M+H]+=213.24 (-15); 1H NMR (D6-DMSO): delta 1.56 (s, 9H), 2.54 (s, 3H), 7.59 (s, 1H), 7.66 (s, 1H). | |
In toluene; at 80℃; for 92h;Product distribution / selectivity; | a) A suspension of 2-chloro-6-methyl-isonicotinic acid (7.0 g, 40.9 mmol) in toluene (100 mL) is heated to 80 C. and then slowly treated with N,N-dimethylformamide di-tert. butylacetal (21.2 g, 104.3 mmol). The mixture becomes clear. Heating and stirring is continued for 20 h before another portion N,N-dimethylformamide di-tert. butylacetal (8.32 g, 40.9 mmol) is added. Stirring is continued at 80 C. for 72 h. The reaction mixture is cooled to rt, diluted with diethyl ether and washed with sat. aq. Na2CO3-solution. The org. extract is dried over MgSO4, filtered and the solvent is carefully evaporated. The crystalline material that forms is collected, carefully washed with cold heptane and dried to give 2-chloro-6-methyl-isonicotinic acid tert.-butyl ester (6.29 g) as colourless fine needles; LC-MS: tR=1.01 min; [M+1]+=228.11; 1H NMR (CDCl3): delta 7.61 (s, 1H), 7.56 (s, 1H), 2.59 (s, 3H), 1.29 (s, 9H). | |
In toluene; at 20 - 80℃; for 75h; | <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (7.55 g, 44.0 mmol) is suspended in toluene (150 mL) at 800C and then treated with N,N-dimethylformamide di-tert.-butyl acetal (50 mL, 209 mmol). The mixture is stirred at 800C for 3 h, then at rt for 72 h. The clear solution is diluted with diethyl ether (250 mL), washed with sat. aq. NaHCOs solution (4x50 mL), dried over MgSO4, filtered and concentrated. The crude product is purified by MPLC on silica gel eluting with heptane:ethyl acetate to give 2-chloro-6-methyl-isonicotinic acid tert.-butyl ester (8.57 g) as a brownish oil which slowly solidifies; LC-MS: tR = 0.99 min, [M+H]+ = 213.24 (-15); 1H NMR (D6-DMSO): £ 1.56 (s, 9 H), 2.54 (s, 3 H), 7.59 (s, 1 H), 7.66 (s, 1 H). | |
In toluene; at 65 - 80℃; for 48h; | [N, N-DIMETHYLFORMAMIDE-DI-TERT.-BUTYL-ACETAL] (19 mL, 80 [MMOL)] is added during 40 min to a hot [(65C,] flask temperature) suspension of 2-chloro-6-methyl- isonicotinic acid (3.40g, 19.8 [MMOL)] in dry toluene (100 mL). The clear orange solution is stirred at [80C] for 48 h, cooled to r. t. and diluted with toluene (100 mL). The solution is washed with water (2 x 40 mL), sat. aq. [NAHCO3] (3 x 30 mL) and sat. aq. NaCI (25 mL), dried [(NA2SO4),] filtered and evaporated. The residue is purified by FC [(SIO2,] [CH2CI2-MEOH)] to provide the title compound. |
Yield | Reaction Conditions | Operation in experiment |
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A suspension of 2-chloro-6-methyl-isonicotinic acid (171.6 mg, [1] mmol), 2- [PHENYL-ETHENEBORONIC] acid (180.0 mg, 1.2 [MMOL),] [K2CO3] (414 mg), Pd [(DPPF) C12-] CH2Cl2 (27 mg) in [CH3CN-H20] (3: 1,10 mL) is stirred under argon at [90C] for 15 h. The solution is cooled to r. t. and aq. hydrochloric acid (2M, 1.5 mL) is added to adjust the pH at 3. The mixture is evaporated to dryness and purified by MPLC (C18, H2O-MeOH) to provide the title compound. |
Yield | Reaction Conditions | Operation in experiment |
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66% | With hydrogen; triethylamine; In ethanol; at 20℃; | Example 1 6-Methylpyridine-4-carboxylic acid A hydrogen filled balloon was attached to a flask containing <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (2 g, 12.0 mmol), palladium 10 wt. % on activated carbon (0.5 g), triethyl amine (4.8 ml) and ethanol (24 ml) and then stirred overnight at room temperature. The reaction mixture was filtered through celite, washed with methanol and concentrated. The residue was titurated with dichloromethane and then filtered to afford 6-methylpyridine-4-carboxylic acid as a white solid; 1.05 g (66%). 1H NMR (MeOD) delta (ppm): 8.62 (d, 1H), 7.68 (s, 1H), 7.60 (d, 1H), 2.55 (s, 3H). |
66% | With hydrogen; triethylamine;palladium 10% on activated carbon; In ethanol; at 20℃; | A hydrogen filled balloon was attached to a flask containing [2-CHLORO-6-METHYLPYRIDINE-4-] carboxylic acid (2 g, 12.0 mmol), palladium 10 wt. % on activated carbon (0.5 g), triethyl amine (4.8 ml) and ethanol (24 ml) and then stirred overnight at room temperature. The reaction mixture was filtered through celite, washed with methanol and concentrated. The residue was titurated with dichloromethane and then filtered to afford 6-methylpyridine-4- carboxylic acid as a white solid ; 1.05 g (66%). 1H NMR [(MEOD)] 8 (ppm): 8.62 (d, 1H), 7.68 (s, 1H), 7.60 (d, 1H), 2.55 (s, 3H). |
With hydrogen; triethylamine;palladium 10% on activated carbon; In ethanol; at 20℃; | 2-Methyl-4-pyridinecarboxylic acid (D26) A hydrogen filled balloon was attached to a flask containing 2-chloro-6-methyl-4- pyridinecarboxylic acid (350mg, 2.10mmol), 10% palladium on activated carbon (88.0mg, 0.0deltammol), triethylamine (1 ml) and ethanol (15ml). The mixture was stirred during the afternoon and overnight at room temperature. The reaction mixture was filtered through celite and washed with ethanol. The solvent was evaporated and the residue triturated with dichloromethane and filtered to afford the product (D26); MS (ES+) m/e 138 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
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With thionyl chloride;N,N-dimethyl-formamide; In toluene; for 4h;Heating / reflux; | xx) <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> ter-butyl ester A suspension of 0.2 g (1.17mmol) 2-chloro-6-methyl-isonicotinic acid in 5 ml toluene is treated with 2 drops of DMF and 0.17ml (2.33mmol) SOCI2 andrefluxed for 4 h. The mix- ture is concentrated under reduced pressure and the residue is taken up in 1.5 ml DCM, 0.22 mi tBuOH and 0.24 ml Et3N and stirred in the presence of 7 mg (0.06mmol) DMAP for 18 h. The mixture is diluted with DCM, washed with 10% aqueous citric acid, water and 10% aqueousNaHC03, dried with sodium sulfate and evaporated. Chromatography of the pro- duct on silica gel (hexane/EtOAc 4: 1 and 3: 1) yields the title compound as a yellowish solid. 1H-NMR (400 MHz, CDCI3) : 7.65 (s,1 H), 7.60 (s,1 H), 2.82 (s, 3H), 1.62 (s, 9H) LC (Nucleosil C-18HD, 4x70 mm,3, uM, 20-100% MeCN (6 min), 100% MeCN (1.5 min) ): 5.83 min | |
With thionyl chloride; for 5h;Heating / reflux; | 14. 5-(2-Chloro-6-methylisonicotinoylV7.7-dimethyl-4.5.6.7-tetrahydro-lH- pyrazolor4,3-c1pgammaridine; A mixture of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (5.0 g, 29.1 mmol) and thionyl chloride (20 ml) is heated to reflux and stirred for 5 hours. The volatiles are removed in vacuo to give the acid chloride as a light purple oil, which solidifies while standing in the freezer. A solution of this acid chloride (1.3 g, 6.7 mmol) in 10 ml of CH2Cl2 is then added dropwise to a mixture of 7,7-dimethyl-4,5,6,7-tetrahydro-lH- pyrazolo[4,3-c]pyridine bis-hydrochloride (1.5 g, 6.7 mmol) and TEA (3.7 ml, 26.8 mmol) in 15 ml OfCH2Cl2 cooled to 0 C. After stirring for 15 min. at 0 C, water (15 ml) is added, and the reaction is warmed to rt. The layers are separated, and the aqueous layer is extracted once more with CH2Cl2 (20 ml). The combined organic extracts are dried(Na2SO4), filtered, and evaporated to give a yellow oily solid. Purification by silica gel column chromatography (gradient from 50% EtOAc/CH2Cl2 to EtOAc) affords the title compound as a white solid. 1H NMR (400 MHz, CDCl3) delta 7.39 (IH, s), 7.25 (IH, s), 7.14 (IH, s), 7.08 (IH, s), 4.82 (IH, s), 4.40 (IH, s), 3.78 (IH, s), 3.33 (IH, s), 2.57 (3H, d, J 4.4), 1.39 (3H, s), 1.25 (3H, s). MS: 305.17 (M+H). | |
With thionyl chloride; for 5h;Heating / reflux; | 31. (2-Chloro-6-methylpyridin-4-yl)(4-hvdroxy-3,5-dimethylphenyl)methanone; A mixture of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (5.0 g, 29.1 mmol) and thionyl chloride (20 mL) is heated to reflux and stirred for 5 h. The volatiles are removed in vacuo to give the acid chloride as light purple oil, which solidifies while standing in the freezer. Aluminum chloride (7.6 g, 56.8 mmol) is added to a stirred solution of this acid chloride (5.4 g, 28.4 mmol) in 100 mL Of CH2Cl2 at rt. A solution of 2,6-dimethylphenol (10.4 g, 85.2 mmol) in 60 mL of CH2Cl2 is then added dropwise, and the resulting mixture is stirred at rt for 24 h. The reaction is quenched with IN HCl (50 mL), and the layers are separated. The aqueous layer is washed two additional times with CH2Cl2 (20 mL each), and the combined organic extracts are dried (Na2SO4), filtered, and evaporated in vacuo to give a brown oil/solid mix. The crude material is diluted with Et2O, and the desired product is crystallized by the addition of hexane. The solid is collected by vacuum filtration and dried in vacuo to give the title compound as a brown solid. MS: 276.15 (M+H). |
With trichlorophosphate; at 50℃; for 1h; | Example compound 42-31: 2-chloro-N-{4-[2-(4-fluoro-3-methylphenyl)imidazo[1,2-b]pyridazin-3-yl]pyridin-2-yl}-6-methylisonicotinamide [Show Image] A mixture of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (670 mg, 3.9 mmol) and phosphorus oxychloride (15 mL) was stirred at 50C for 1 hr, and phosphorus oxychloride was removed by evaporation under reduced pressure. A suspension of the obtained residue in tetrahydrofuran (3 mL) was added to a solution of 4-[2-(4-fluoro-3-methylphenyl)imidazo[1,2-b]pyridazin-3-yl]pyridin-2-amine (460 mg, 1.4 mmol) obtained in Example 16-1 and triethylamine (790 mg, 7.8 mmol) in tetrahydrofuran (10 mL), and the mixture was stirred at room temperature for 3 hr. 5% Aqueous sodium hydrogen carbonate solution was added to the reaction mixture. The obtained mixture was extracted with ethyl acetate/tetrahydrofuran. Ammonia-ethanol solution (2.0 M, 10 mL) was added to the extract, and the mixture was stirred at room temperature overnight. The mixture was dried over anhydrous sodium sulfate, and the solvent was removed by evaporation under reduced pressure. The obtained residue was purified by basic silica gel chromatography (ethyl acetate: hexane = 3:7 - 8:2) and recrystallized from ethanol-tetrahydrofuran to give the title compound (yield 630 mg, 92%). Melting point 298-300C (ethanol-tetrahydrofuran) MS (ESI+): 473 (M+H). 1H-NMR (CDCl3) delta: 2.30 (3H, d, J=1.9Hz), 2.64 (3H, s), 6.95-7.02 (1H, m), 7.17 (1H, dd, J=9.2, 4.5Hz), 7.25-7.29 (1H, m), 7.34-7.40 (1H, m), 7.53 (1H, d, J=0.8Hz), 7.60-7.65 (2H, m), 8.05 (1H, dd, J=9.2, 1.7Hz), 8.35 (1H, dd, J=5.3, 0.8Hz), 8.41 (1H, dd, J=4.5, 1.7Hz), 8.71 (1H, s), 8.80 (1H, s). | |
With oxalyl dichloride; N,N-dimethyl-formamide; In dichloromethane; at 0 - 20℃; | Example 6: Preparation of benzyl 1 -(2-chloro-6-methyl-pyridine-4-carbonyl)- 5-(4-fluorophenyl)sulfanyl-spiro[indoline-3,4'-piperidine]-1'-carboxylate Oxalyl chloride (1.68 mL, 19.59 mmol) and a catalytic amount of N,N- dimethylformamide are added to a pre-cooled (0 C) suspension of 2-chloro-6- methylisonicotinic acid (1.12 g, 6.53 mmol) in dichloromethane (200 mL). As the gas evolution ceases, a clear solution is obtained which is stirred further for 2 h at room temperature. The reaction is then concentrated under reduced pressure and the residue is stripped once with dry toluene. The residue obtained is dissolved in dichloromethane (100 mL) and the resulting solution is added dropwise to a pre- cooled (-20 C) solution of benzyl 5-(trifluoromethylsulfonyl)spiro[indoline-3,4'- piperidine]-1 '-carboxylate (1.96 g, 4.37 mmol) and triethyl amine (2.13 mL, 15.32 mmol) in dry dichloromethane (300 mL). The reaction is reacted at - 20 C for 30 min after which complete conversion is observed. The reaction mixture is warmed up to room temperature and is washed with water (100 mL), brine (100 mL), is dried over sodium sulphate, filtered and is finally concentrated under reduced pressure to give a dark green oil. The crude product is purified by column chromatography on silica gel (heptane / ethyl acetate 25 to 50% as eluent) to afford the desired product as a light pink solid (1 .65 g, 2.74 mmol, 63% yield) in the presence of minor impurities (HPLC-MS Method 2: retention time: 2.306 min, m/z 602.0). | |
With thionyl chloride; at 70℃; | [00353] A mixture of 2-chloro-6-methyl-pyridine-4-carboxylic acid (1.29 g, 7.5 mmol) and thionyl chloride (5 mL, 68.55 mmol) in dichloromethane (10 mL) was stirred at 70 C overnight. Concentrated under vacuum to provide 2-chloro-6-methyl- pyridine-4-carbonyl chloride which was carried to next step as is. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
A suspension of 2-chloro-6-methyl-isonicotinic acid (171.6 mg, 1 MMOL), (E) -2- PHENYL-ETHENEBORONIC acid (180.0 mg, 1.2 MMOL), K2CO3 (414 mg), Pd (dppf) C12- CH2CI2 (27 mg) in CH3CN-H20 (3: 1,10 mL) is stirred under argon at 90C for 15 h. The solution is cooled to r. t. and aq. hydrochloric acid (2 M, 1.5 mL) is added to adjust the pH at 3. The mixture is evaporated to dryness and purified by reversed phase MPLC to provide the title compound. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71% | Example G (2-Chloro-6-methyl-pyridin-4-yl)-methanol (33): To a stirred solution of <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (2 g, 11.65 mmol) in anhydrous THF (40 ml) cooled in an ice bath, was added 1M borane-methyl sulfide complex (6 ml, 60 mmol). After 1 hr, the mixture was stirred for 48 hr at room temperature. The mixture was cooled in an ice bath and conc. HCl (18 ml) was added and stirred for 30 min. The mixture was then basified by addition of 50% aqueous NaOH (15 ml). The product was extracted with dichloromethane, dried with anhydrous potassium carbonate, filtered, and evaporated in vacuo. The crude product was purified by silica gel column chromatography (eluent, methanol:dichloromethane (5:95)) to afford 1.3 g (71%) of a pale yellow solid; m.p. 112-113 C.; 1H NMR (200 MHz, CDCl3) delta 2.26(1H, t, J=5.4 Hz), 2.52 (3H, s), 4.70 (2H, d, J=5.4 Hz), 7.15 (1H, s), 7.16 (1H, s); m/z (EI) 157(M+). | |
53% | (2-Chloro-6-methylpyridin-4-yl) methanol; 2-Chloro-6-methyl pyridine-4-carboxylic acid (0.52 g, 3.04 mmol) and borane-tetrahydrofuran complex (6.08 mL, 6.08 mmol) were combined in tetrahydrofuran (10.0 mL) at 0C. After 15 min, the ice bath was removed and mixture stirred at room temperature for 4 h. The mixture was cooled to 0C, and treated with methanol until no bubbles were observed. The solvents were removed and the crude mixture dissolved in ethyl acetate which was washed with water (2X), brine (2X), dried over sodium sulfate, and concentrated to afford 0.25 g (53%) which was used without purification. lH-NMR (CDC13, 500 MHz) 8 2.53 (s, 3H), 4.7 (s, 2H), 7.06 (s, 1H), 7.15 (s, 1H). Mass spec.: 158.0 (MH) + | |
2-Chloro-6-methyl-4-pyridinecarboxylic acid (200 mg, 1.166 mmol; Aldrich) was dissolved in THF (5.83 ml) in a 50 ml. round-bottomed flask flushed with argon and cooled to 0 0C. This solution was treated with 1 M borane-tetrahydrofuran complex (5.828 ml, 5.83 mmol) and stirred at room temperature overnight. The reaction mixture was cooled in an ice bath, treated with concentrated hydrochloric acid (2 ml), stirred for 30 minutes then basified with 50 % w/w aqueous sodium hydroxide. This solution was extracted with EtOAc (3 x 30 ml) and the combined organic solutions were washed with brine (30 ml), dried over magnesium sulfate, filtered and evaporated to dryness to give the crude product (172 mg) as a white solid. The crude product was purified on a 25+S Biotage silica cartridge, eluting with a 0 to 5 % mixture of MeOH in DCM. The title compound was obtained (144 mg) as a white solid, m/z [M+H]+: 158.1 / 160.1 Retention time 0.52 min (LC/MS method 3) |
1.75 g | (1) Synthesis of (2-chloro-6-methylpyridin-4-yl)methanol Borane-THF complex (16.5 mL, 1.06 M solution in THF) was added to a solution of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (2 g) in THF (10 mL), and the mixture was heated under reflux for 12 hours. 5 M hydrochloric acid was added to the reaction mixture, and the mixture was stirred at room temperature for 30 minutes. The reaction mixture was neutralized by adding a saturated aqueous sodium bicarbonate solution, followed by extraction with ethyl acetate. The organic layer was concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (ethyl acetate/n-heptane, 10% to 50%) to give the title compound (1.75 g). ESI-MS m/z 158 [M+H]+ | |
7.24 g | With borane-THF; In tetrahydrofuran; at 0 - 20℃; | To a stined solution of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (10.00 g; 55.4 mmol; Maybridge,)30 in THF (100 mL) at ooc was added a 1M solution ofborane-tetrahydrofuran complex in THF (221.5 mL; 221.5 mmol). The mixture was allowed to react at RT overnight. Then, MeOH (22 mL) wascautiously added to the stirred mixture while cooling with an ice bath. The batch was diluted with ethylacetate and washed with aqueous sodium hydroxide solution (1N) and saturated aqueous sodium chloridesolution. The organic layer was filtered using a Whatman filter and concentrated. The residue was5 purified by column chromatography on silica gel (DCM I EtOH 95:5) to give the pure product (7.24 g;45.9 mmol).1H NMR (400MHz, CDCb, 300K) 8 = 7.18 (s, lH), 7.09 (s, lH), 4.72 (d, 2H), 2.55 (s, 3H), 2.17 (tr, lH). |
7.24 g | With borane-THF; In tetrahydrofuran; at 0 - 20℃; | To a stirred solution of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (10.00 g; 55.4 mmol; Maybridge) in THF (100 mL) at 0C was added a 1M solution of borane-tetrahydrofuran complex in THF (221.5 mL; 221.5 mmol). The mixture was allowed to react at RT overnight. Then, MeOH (22 mL) was cautiously added to the stirred mixture while cooling with an ice bath. The batch was diluted with ethyl acetate and washed with aqueous sodium hydroxide solution (IN) and saturated aqueous sodium chloride solution. The organic layer was filtered using a Whatman filter and concentrated. The residue was purified by column chromatography on silica gel (DCM / EtOH 95:5) to give the pure product (7.24 g; 45.9 mmol). 1H NMR (400MHz, CDCl3, 300K) delta = 7.18 (s, 1H), 7.09 (s, 1H), 4.72 (d, 2H), 2.55 (s, 3H), 2.17 (tr, 1H). |
7.24 g | With borane-THF; In tetrahydrofuran; at 20℃; | (2-Chloro-6-methylpyridin-4-yl)methanol To a stirred solution of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (10.00 g; 55.4 mmol; Maybridge) in THF (100 mL) at 0C was added a 1M solution of borane-tetrahydrofuran complex in THF (221.5 mL; 221.5 mmol). The mixture was allowed to react at RT overnight. Then, MeOH (22 mL) was cautiously added to the stirred mixture while cooling with an ice bath. The batch was diluted with ethyl acetate and washed with aqueous sodium hydroxide solution (IN) and saturated aqueous sodium chloride solution. The organic layer was filtered using a Whatman filter and concentrated. The residue was purified by column chromatography on silica gel (DCM / EtOH 95:5) to give the pure product (7.24 g; 45.9 mmol). NMR (400MHz, CDCL, 300K) delta = 7.18 (s, 1H), 7.09 (s, 1H), 4.72 (d, 2H), 2.55 (s, 3H), 2.17 (tr, 1H). |
1.67 g | With borane-THF; In tetrahydrofuran; at 0 - 20℃; | Preparation of Intermediate 7.1: (2-Chloro-6-methylpyridin-4-yl)methan To a stirred solution of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (2 g; 11.1 mmol; ACROS Organics, CAS 25462-85-5) in THF (29 mL) at 0 C was added a 1M solution of borane-tetrahydrofuran complex in THF (33.2 mL; 33.2 mmol). The mixture was allowed to react at RT overnight. Then, the batch was diluted with EtOAc (350 mL) and aqueous sodium hydroxide solution (IN; 330 mL) was added. After phase separation the organic layer was washed with saturated aqueous sodium chloride solution, dried (sodium sulfate), and concentrated to yield the title compund (1.67 g). -NMR (400 MHz, DMSO-d6): delta [ppm] = 7.19 (d, 1H), 5.48 (t, 1H), 4.51 (d, 2H), 2.43 (s, 3H). |
1.67 g | With borane-THF; In tetrahydrofuran; at 0 - 20℃; | To a stirred solution of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (2 g; 11.1 mmol; ACROS Organics, CAS 25462-85-5) in THF (29 mL) at 0 C was added a 1M solution of borane-tetrahydrofuran complex in THF (33.2 mL; 33.2 mmol). The mixture was allowed to react at RT overnight. Then, the batch was diluted with EtOAc (350 mL) and aqueous sodium hydroxide solution (IN; 330 ml) was added. After phase separation the organic layer was washed with saturated aqueous sodium chloride solution, dried (sodium sulfate), and concentrated to yield the title compund (1.67 g). (0459) -NMR (400 MHz, DMSO-d6): delta [ppm] = 7.19 (d, 1H), 5.48 (t, 1H), 4.51 (d, 2H), 2.43 (s, 3H). |
With sodium hydroxide; In diethyl ether; water; | Preparation of 2-Chloro-4-chloromethyl-6-methylpyridine To a slurry of lithium aluminum hydride (0.45 g, 11.9 mmol) in anhydrous diethyl ether (40 mL) at 0 C., a solution of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (2.0 g, 11.7 mmol) in diethyl ether (30 mL) was added. The resulting mixture was stirred at room temp. overnight, and quenched with successive addition of water (0.45 mL), 15% aqueous NaOH (0.45 mL), and water (1.35 mL). The resultant slurry was stirred at room temp. for 30 min., and filtered through a small plug of Celite. The filtrate was washed brine, dried over anhydrous magnesium sulfate, filtered, and concentrated under vacuum to provide 2-chloro-4-hydroxymethyl-6-methylpyridine. |
Yield | Reaction Conditions | Operation in experiment |
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Example 58; 2-Methylisonicotinohydrazide; HOBt (950 mg, 6.99 mmol), and EDCI (1.34 g, 6.99 mmol) were added to a suspension of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (1 g, 5.83 mmol) in acetonitrile (15 ml) at room temperature. After 1 h a solution of hydrazine monohydrate (0.56 ml, 11.66 mmol) and cyclohexene (0.15 mL, 1.5 mmol) in acetonitrile (5 ml) was added drop-wise at 0C. The mixture was stirred overnight and allowed to warm to room temperature. The solvent was removed in vacuo and the residue was diluted with ethyl acetate, washed with saturated sodium bicarbonate and brine, dried over sodium sulfate, filtered and concentrated to afford 2-chloro-6-methylisonicotinohydrazide (yellow solid, l. lg, used without further purification). |
Yield | Reaction Conditions | Operation in experiment |
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1.63 g (60%) | With triethylamine; In N-methyl-acetamide; dichloromethane; N,N-dimethyl-formamide; | 5-(3-Chloro-5-methyl-pyrid-4-yl)-3-(2-pyridyl)-1,2,4-oxadiazole A mixture of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (1.71 g, 10 mmol) in dichloromethane (15 mL) was treated with 2M oxalyl chloride (15 ml, 30 mmol, dichloromethane) and 3 drops of N,N-dimethylformamide. The mixture was stirred 2 hours at room temperature. The solvent and excess reagent were removed in vacuo. The residue was treated with 2-pyridylamidoxime (1.37 g, 10 mmol) and triethylamine (3.03 g, 30 mmol) in dichloromethane (15 mL). The mixture was then heated in dimethylformamide (10 mL) for 1 hours at 120 C. Standard work up, afforded 1.63 g (60%) of 5-(3-chloro-5-methyl-pyrid-4-yl)-3-(2-pyridyl)-1,2,4-oxadiazole. |
Yield | Reaction Conditions | Operation in experiment |
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In tetrahydrofuran; | <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (13-1, 2.00 g, 11.7 mmol) was dissolved in 10 mL of anhydrous THF under N2. The solution was cooled to 0 C., and borane-THF (1 M solution in THF, 14.0 mL, 14.0 mmol) was added slowly. The reaction was heated to reflux. After 3 hours the reaction was cooled to room temperature and quenched slowly with 1M HCl (aq) until cessation of bubbling. The pH of the solution was adjusted to 7 with saturated NaHCO3 (aq). The mixture was extracted 3* with EtOAc and the extracts dried over Na2SO4, filtered and concentrated to afford (2-chloro-6-methyl-pyridin-4-yl)-methanol. 1H NMR (CDCl3) delta 7.16 (s, 1H), 7.06 (s, 1H), 4.70 (d, 2H, J=5.8 Hz), 2.53 (s, 3H), 1.95 (t, 1H, J=5.8 hz). |
Yield | Reaction Conditions | Operation in experiment |
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100% | In methanol; dichloromethane; | The starting material was prepared as follows: Oxalyl chloride (1.9 g, 15 mmol) was added to 2-chloro-6-methyl-pyridine4-carboxylic acid (1.7 g, 10 mmol) in methylene chloride (30 ml) and the mixture stirred for 2 hours. The volatiles were removed by evaporation and methanol (20 ml) added to the residue. The mixture was stirred for 1 hour and the volatiles removed by evaporation to give methyl 2-chloro-6-methyl-pyridine-4-carboxylate (1.85 g, 100percent) as an off-white solid. 1 H NMR Spectrum: (CDCl3) 2.55(s, 3H); 3.90(s, 3H); 7.55(s, 1H); 7.60(s, 1H); MS - ESI: 186 [MH]+ |
Yield | Reaction Conditions | Operation in experiment |
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86% | In ethanol; dichloromethane; | The starting material was prepared as follows: A solution of 2-chloro-6-methyl-4-pyridinecarboxylic acid (2 g, 12 mmol) in ethanol (100 ml) and concentrated sulphuric acid (10 ml) was heated at reflux for 2 hours. The volatiles were removed by evaporation and the residue was dissolved in methylene chloride. The solution was washed with a saturated aqueous sodium hydrogen carbonate solution and brine, dried (MgSO4) and the solvent removed by evaporation. The residue was purified by column chromatography eluding with ethyl acetate/petroleum ether (1/9) to give ethyl 2-chloro-6-methyl-4-pyridinecarboxylate (2 g, 86%). 1 H NMR Spectrum: (CDCl3) 1.41(t, 3H); 2.6(s, 3H); 4.40(q, 2H); 7.63(s, 1H); 7.69(s, 1H) MS - ESI: 200 [MH]+ Elemental Analysis: Found C 54.4 H 5.3 N 7.0 C9 H10 NO2 Cl Requires C 54.1 H 5.0 N 7.0% |
Yield | Reaction Conditions | Operation in experiment |
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In methanol; | 2-Chloro-6-methyl-4-pyridine carboxylic acid (0.25 g, 1.46 mmol) was dissolved in 10 mL methanol under nitrogen, followed by the dropwise addition of BF3.MeOH (0.45 mL, 3 eq) via syringe. The solution was refluxed for three hours, then stirred at room temperature overnight. The solution was poured into 20 mL water and extracted with Et2 O (2*25 mL). The organics were collected, washed with 1.0 N NaOH, H2 O, dried over MgSO4, then concentrated to give methyl (2-chloro-6-methyl)isonicotinate (0.14 g) as a peach colored solid. |
Yield | Reaction Conditions | Operation in experiment |
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To 0.500 g (2.91 mmol) 2-chloro-6-methyl-isonicotinic acid in 5.0 mL of anhydrous methylene chloride and 0.5 mL of anhydrous DMF was added 0.47 g (3.5 mmol) 1-hydroxybenzotriazole hydrate. The reaction mixture was stirred for 20 minutes at 0 C. 1-(3-Dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (0.67 g, 3.5 mmol) was added to the reaction mixture. Stirring was continued for 1 hour allowing the reaction mixture to slowly warm up to room temperature. The reaction mixture was re-cooled to 0 C. and 0.750 g (5.8 mmol) of diisopropylethylamine and 0.340 g (3.5 mmol) of O,N-dimethyl-hydroxylamine were added. The reaction mixture was allowed to warm to room temperature and was stirred overnight. The reaction mixture was diluted with water and extracted with 50 mL of methylene chloride. The organic phase was washed with water, and brine, dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was chromatographed on silica gel using 5:1 hexane:ethyl acetate to give 360 mg of the 2-chloro-N-methoxy-6,N-dimethyl-isonicotinamide. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | With dihydrogen peroxide; acetic acid; In water; at 95℃; for 76h; | <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (6.86 g, 40 mmol, 1 eq) is dissolved in AcOH (40 ml). 2 ml of hydrogen peroxide (35% in H2O) is added to the reaction mixture, and the reaction is stirred for 76 hours at 95 C. During the reaction time, 2 ml of hydrogen peroxide (35% in H2O) are added five times in regular intervals. The reaction mixture is concentrated and coevaporated with toluene to give the product (7.25 g, 96%).HPLC (Nucleosil C18HD, 4×70 mm, 3 mum, 5-100% AcCN (6 min), 100% AcCN (1.5 min)) retention time=2.46 min1H-NMR (400 MHz, d6-DMSO): 8.05 (d, 1H), 7.96 (d, 1H), 2.46 (s, 3H). |
With dihydrogen peroxide; acetic acid; In water; at 95℃; for 76h; | <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (6.86 g, 40 mmol, 1 eq) is dissolved in AcOH (40 ml). 2 ml of H2O2 (35% in H2O) are added, and the reaction mixture is stirred for 76 h at 95C. During that time, 2 ml of H2O2 (35% in H2O) are added five times in regular intervals. The reaction mixture is concentrated and co-evaporated with toluene to give the product. HPLC (Nucleosil C18HD, 4x70 mm, 3 mum, 5-100% MeCN (6 min), 100% MeCN (1.5 min)) retention time: 2.46 min.1H-NMR (400 MHz, DMSO-d6): 8.05 (d, 1H), 7.96 (d, 1H), 2.46 (s, 3H). | |
With dihydrogen peroxide; acetic acid; In water; at 95℃; for 76h; | a) 2-Chloro-6-methyl-1-oxy-isonicotinic acid<strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (6.86 g, 40 mmol, 1 eq) is dissolved in AcOH (40 ml). 2 ml of hydrogen peroxide (35% in water) is added to the reaction mixture, and the reaction is stirred for 76 hours at 95 0C. During the reaction time, 2 ml of hydrogen peroxide (35% in water) are added five times in regular intervals. The reaction mixture is concentrated and co- evaporated with toluene to give the product. 1 H-NMR (400 MHz, dmso-d6): 8.05 (d, 1 H), 7.96 (d, 1 H), 2.46 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium hydroxide; hydrazine; In water; at 125℃; for 24h; | A mixture of 7.35 g 42.86 mmol) 2-chloro-6-methyl-isonicotinic acid, 10.75 g (250 mmol) hydrazine hydrate and 10.7 ml 4N NaOH is stirred at 125C for 24 h. The mixture is evaporated to dryness, taken up in 35 ml water, 35 ml ethanol and 50 ml acetone and stirred for 1 h. The mixture is concentrated once more and refluxed in a solution of 20 ml thionyl chloride in 200 ml ethanol. After 1.5 h the mixture is cooled down and filtered. The filtrate is diluted with ethyl acetate and washed with 10% aq NaHCO3 solution. The aquous phase is extracted with EtOAc/acetone (4:1) three times. The combined organic layers are dried over sodium sulfate and chromatographed on silica gel ((EtOAc/hexanes = 1 :2) to give a brownish oil, which crystallizes from EtOH/water. M. p. 79-82CRf: (EtOAc/hexanes) = 1/1): 0.27HPLC (Nucleosil C-18HD, 4x70 mm, 3 mum, 5 -100% MeCN (6 min), 100% MeCN (1.5 min)):3.617 minMS (ES+): 236 = [M+Hf1H-NMR (400 MHz, CDCI3): 8.05 (br, 1H), 7.59 (s, 1H), 7.14 (s, 1H), 4.39 (q, 2H), 2.46 (s,3H), 2.07 (S1 3H), 1.93 (s, 3H), 1.41 (t, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In diethyl ether; ethanol; | 2-Chloro-6-methyl isonicotinic acid was treated in ethanol (0.04 M) with diazomethane in ether to obtain the methyl ester derivative. The solution was concentrated to afford the title compound |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | To the solution of 2-chloro-6-methyl-isonicotinic acid (2.0 g, 11 mmol) in allylic alcohol (30 ml) is carefully added sodium hydride (0.59 g, 23 mmol, 2.1 eq) in small portions. After the addition the reactions is heated at reflux temperature under an atmosphere of nitrogen during 21 h. After cooling to rt another portion of sodium hydride (0.59 g, 23 mmol, 2.1 eq) is added and the mixture is heated at reflux over night. This procedure is repeated twice more. After cooling the mixture is poured on ice water and acidified to pH 3-4 by addition of 1 N aq. HCl. The mixture is extracted with EtOAc, the organic layers are dried over sodium sulfate and the solvent is evaporated at reduced pressure. The residue is purified by chromatography on silica gel (flashmaster, DCM to DCM/MeOH 95/5, with 0.5% AcOH) to give the product (1.4 g, 7.2 mmol, 65%).MS (ES+): 194=[M+H]+ 1H-NMR (400 MHz, CD3OD): 7.33 (s, 1H), 7.11 (s, 1H), 6.17-6.07 (m, 1H), 5.42 (d, 1H), 5.26 (d, 1H), 4.87 (d, 2H), 2.50 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
A mixture of 7.35 g 42.86 mmol) 2-chloro-6-methyl-isonicotinic acid, 10.75 g (250 mmol) hydrazine hydrate and 10.7 ml 4N NaOH is stirred at 125 C. for 24 h. The mixture is evaporated to dryness, taken up in 35 ml water, 35 ml ethanol and 50 ml acetone and stirred for 1 h. The mixture is concentrated once more and refluxed in a solution of 20 ml thionyl chloride in 200 ml ethanol. After 1.5 h the mixture is cooled down and filtered. The filtrate is diluted with ethyl acetate and washed with 10% aq. NaHCO3 solution. The aqueous phase is extracted with EtOAc/acetone (4:1) three times. The combined organic layers are dried over sodium sulfate and chromatographed on silica gel ((EtOAc/hexanes=1:2) to give 9.2 g of a brownish oil, which crystallizes from EtOH/water. Mp 79-82 C.Rf: (EtOAc/hexanes)=1/1): 0.27LC (Nucleosil C-18HD, 4×70 mm, 3 mum, 5-100% AcCN (6 min), 100% AcCN (1.5 min)): 3.617 minMS (ES+): 236=[M+H]+ 1H-NMR (400 MHz, CDCl3): 8.05 (br, 1H), 7.59 (s, 1H), 7.14 (s, 1H), 4.39 (q, 2H), 2.46 (s, 3H), 2.07 (s, 3H), 1.93 (s, 3H), 1.41 (t, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
at 85℃; for 144h; | A solution of 2-chloro-6-methyl-isonicotinic acid (1.03 g, 5.98 mmol) in pyrrolidine (5 ml_) is stirred at 85C for 6 days. The mixture is diluted with 1 N aq. NaOH (40 ml_) and the solvent is removed in vacuo. The crude product is again dissolved in 1 N aq. NaOH (3 ml_) and methanol (1 ml_) and pyrified by MPLC on RP-Cis-silica gel to give 2-methyl-6-pyrrolidin-1 -yl-isonicotinic acid (1.18 g) as a beige solid; LC-MS: tR = 0.52 min; [M+H]+ = 207.06; 1H NMR (D6-DMSO): £ 1.89-1.94 (m, 4 H), 2.27 (s, 3 H), 3.33-3.38 (m, 4 H), 6.61 (s, 1 H), 6.77 (s, 1 H). | |
at 85℃; for 144h; | 2-Methyl-6-pyrrolidin-1-yl-isonicotinic acid; A solution of 2-chloro-6-methyl-isonicotinic acid (1.03 g, 5.98 mmol) in pyrrolidine (5 mL) is stirred at 85 C. for 6 days. The mixture is diluted with 1 N aq. NaOH (40 mL) and the solvent is removed in vacuo. The crude product is again dissolved in 1 N aq. NaOH (3 mL) and methanol (1 mL) and purified by MPLC on RP-C18-silica gel to give 2-methyl-6-pyrrolidin-1-yl-isonicotinic acid (1.18 g) as a beige solid; LC-MS: tR=0.52 min, [M+H]+=207.06; 1H NMR (D6-DMSO): delta 1.89-1.94 (m, 4H), 2.27 (s, 3H), 3.33-3.38 (m, 4H), 6.61 (s, 1H), 6.77 (s, 1H). | |
at 85℃; for 144h; | 2-Methyl-6-pyrrolidin-1-yl-isonicotinic acid A solution of 2-chloro-6-methyl-isonicotinic acid (1.03 g, 5.98 mmol) in pyrrolidine (5 mL) is stirred at 85 C. for 6 days. The mixture is diluted with 1 N aq. NaOH (40 mL) and the solvent is removed in vacuo. The crude product is again dissolved in 1 N aq. NaOH (3 mL) and methanol (1 mL) and pyrified by MPLC on RP-C18-silica gel to give 2-methyl-6-pyrrolidin-1-yl-isonicotinic acid (1.18 g) as a beige solid; LC-MS: tR=0.52 min; [M+H]+=207.06; 1H NMR (D6-DMSO): delta 1.89-1.94 (m, 4H), 2.27 (s, 3H), 3.33-3.38 (m, 4H), 6.61 (s, 1H), 6.77 (s, 1H). |
A solution of 2-chloro-6-methyl-isonicotinic acid (1.03 g, 5.98 mmol) in pyrrolidine (5 mL) is stirred at 85C for 6 days. The mixture is diluted with 1 N aq. NaOH (40 mL) and the solvent is removed in vacuo. The crude product is again dissolved in 1 N aq. NaOH (3 mL) and methanol (1 mL) and puyrified by MPLC on RP-Ci8-silica gel to give 2-methyl-6- pyrrolidin-1 -yl-isonicotinic acid (1.18 g) as a beige solid; LC-MS: tR = 0.52 min, [M+H]+ = 207.06; 1H NMR (D6-DMSO): £ 1.89-1.94 (m, 4 H), 2.27 (s, 3 H), 3.33-3.38 (m, 4 H), 6.61 (s, 1 H), 6.77 (s, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In dichloromethane; at 0 - 20℃; | To a cooled solution (00C) of 4,N-dihydroxy-3,5-dimethyl-benzamidine (1.12 g, 6.19 mmol), 2-chloro-6-methyl-isonicotinic acid (1.06 g, 6.19 mmol) and Hnig's base (1.20 g, 9.29 mmol) in DCM (30 mL), PyBOP (3.55 g, 6.81 mmol) is added. The mixture is stirred at 00C and is warmed to rt overnight. The white suspension is diluted with EA (200 mL), washed four times with 1 N aq. KHSO4 (50 mL), dried over MgSO4, filtered and concentrated to give the hydroxyamidine ester intermediate as a yellow-beige solid; LC- MS: tR = 0.91 min; [M+1]+ = 334.01. This material is dissolved in dioxane (60 mL) and the resulting solution is stirred at 95C for 4 h. The mixture is cooled and the solvent is removed in vacuo. The crude product is purified by MPLC on silica gel to give 4-[5-(2- chloro-6-methyl-pyridin-4-yl)-[1 ,2,4]oxadiazol-3-yl]-2,6-dimethyl-phenol (935 mg) as a yellow solid; LC-MS: tR = 1.03 min; [M+1]+ = 316.20. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine; In N,N-dimethyl-formamide; at 60℃; for 2h; | To a mixture of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (2.00 g, 11.7 mmol), N,O-dimethylhydroxylamine hydrochloride (1.19 g, 12.2 mmol), and triethylamine (6.50 mL, 46.6 mmol) in DMF (58 mL), HOBT hydrate (2.68 g, 17.5 mmol) and EDC (3.35 g, 17.5 mmol) are added. After stirring at 60 oC for 2 h, the mixture is poured into water (200 mL). The aqueous layer is extracted with EtOAc-toluene (1:1, 150 mL x 3). The combined organic layer is washed with water and brine, dried over sodium sulfate, and concentrated in vacuo. The residue is purified by column chromatography on silica gel eluting with hexane / EtOAc (5:1) to give 2.50 g (93% yield) of the title compound as a colorless oil. 1H-NMR (300 MHz, CDCl3) delta 7.36 (1H, s), 7.29 (1H, s), 3.56 (3H, s), 3.36 (3H, s), 2.59 (3H, s), MS (ESI) m/z: 215 (M+H)+. |
a) 2-Chloro-N-methoxy-6,N-dimethyl-isonicotinamideTo 0.500 g (2.91 mmol) 2-chloro-6-methyl-isonicotinic acid in 5.0 mL of anhydrous methylene chloride and 0.5 mL of anhydrous DMF was added 0.47 g (3.5 mmol) 1-hydroxybenzotriazole hydrate. The reaction mixture was stirred for 20 minutes at 0 C. 1-(3-Dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (0.67 g, 3.5 mmol) was added to the reaction mixture. Stirring was continued for 1 hour allowing the reaction mixture to slowly warm up to room temperature. The reaction mixture was re-cooled to 0 C. and 0.750 g (5.8 mmol) of diisopropylethylamine and 0.340 g (3.5 mmol) of O,N-dimethyl-hydroxylamine were added. The reaction mixture was allowed to warm to room temperature and was stirred overnight. The reaction mixture was diluted with water and extracted with 50 mL of methylene chloride. The organic phase was washed with water, and brine, dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was chromatographed on silica gel using 5:1 hexane:ethyl acetate to give 360 mg of the 2-chloro-N-methoxy-6,N-dimethyl-isonicotinamide |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate; N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 20℃; | DIPEA (533 mg, 4.1 mmol) and a solution of tert-butyl [trans-4-(ammomQthyl)- cyclohexyl]methyl} carbamate (500 mg, 2.1 mmol) dissolved in DMF (1 mL) were added to a solution of <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (389 mg, 2.3 mmol) and TBTU (795 mg, 2.5 mmol) in DMF (4 mL) and the reaction mixture was stirred for 16 h at rt. Water was added to give a precipitate which was collected by filtration and washed with a mixture of water/MeOH (5:1) to give the title compound (764 mg, 93 %). 1H NMR (400 MHz, CDCl3) delta 7.40 (s, IH), 7.38 (s, IH), 6.12 (s, IH), 4.57 (s, IH), 3.31 (t, 2H), 3.01- 2.93 (m, 2H), 2.60 (s, 3H), 1.87-1.76 (m, 4H), 1.61-1.49 (m, IH), 1.44 (s, 10H), 1.09-0.88 (m, 4H); m/z 396.1 (M+H)+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
22% | To a solution containing 2-chloro-6-methyl-isonicotinic acid (75 mg, 0.44 mmol) in THF (2 mL) was added DCC (90 mg, 0.44 mmol), HOBt (59 mg, 0.44 mmol) and Et3N (102 uL, 0.73 mmol). The mixture was stirred for 5 min then compound 1OD (0.1 g, 0.36 mmol) was added. The mixture was stirred at room temperature for 16 h then concentrated. The residue was partitioned between DCM and sat. NaHCO3 (aq.). The organic layer was dried (Na2SO4), filtered and concentrated. The residue was purified by normal phase column chromatography with a gradient elution of DCM to 30% acetone in DCM to afford compound 196 (34 mg, 22%): MP = 179-1800C. 1HNMR (CD3OD)D7.72(d, J=7.5Hz, 2H), 7.44(m, 2H), 6.87(d, J=9.0Hz, IH), 4.91(s, 2H), 2.87(m, IH), 2.63(s, 3H), 2.50(m, 4H), 2.12(m, 2H), 1.99(m, 6H), 1.77(m, 2H) ; LC/MS (ESI+): 428 (M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In dichloromethane; at 20℃; for 1h; | A solution of 2-chloro-6-methyl-isonicotinic acid (227 mg, 1.33 mmol), PyBOP (700 mg, 1.34 mmol), DIPEA (860 mg, 6.64 mmol), and 4-allyloxy-N-hydroxy-3,5-dimethyl-benzamidine (410 mg, 1.86 mmol) in DCM (7 mL) is stirred at rt for 1 h. The mixture is diluted with ether, washed with 1 N aq. HCl (2×25 mL), 1 N aq. KHSO4 solution (2×25 mL) and brine (25 mL), dried over Na2SO4, filtered and concentrated. The crude product is purified by MPLC on silica gel eluting with a gradient of EA in heptane to give 2-chloro-6-methyl-isonicotinic acid (4-allyloxy-N-hydroxy-3,5-dimethyl-benzamidine) ester (142 mg) as a colourless resin; LC-MS: tR=1.04 min, [M+1]+=374.10. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With benzotriazol-1-yloxyl-tris-(pyrrolidino)-phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In dichloromethane; at 0 - 20℃; | a) To a cooled solution (0 C.) of 4,N-dihydroxy-3,5-dimethyl-benzamidine (1.12 g, 6.19 mmol), 2-chloro-6-methyl-isonicotinic acid (1.06 g, 6.19 mmol) and Huenig's base (1.20 g, 9.29 mmol) in DCM (30 mL), PyBOP (3.55 g, 6.81 mmol) is added. The mixture is stirred at 0 C. and is warmed to rt overnight. The white suspension is diluted with EA (200 mL), washed four times with 1 N aq. KHSO4(50 mL), dried over MgSO4, filtered and concentrated to give the hydroxyamidine ester intermediate as a yellow-beige solid; LC-MS: tR=0.91 min; [M+1]+=334.01. This material is dissolved in dioxane (60 mL) and the resulting solution is stirred at 95 C. for 4 h. The mixture is cooled and the solvent is removed in vacuo. The crude product is purified by MPLC on silica gel to give 4-[5-(2-chloro-6-methyl-pyridin-4-yl)-[1,2,4]oxadiazol-3-yl]-2,6-dimethyl-phenol (935 mg) as a yellow solid; LC-MS: tR=1.03 min; [M+1]+=316.20. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
59% | With ammonium chloride; benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine; In N,N-dimethyl-formamide; at 20℃; for 24h; | 00679] (i) Production of 2-chloro-6-rnethylpyridine-4-carboxamide[00680] A mixture of <strong>[25462-85-5]2-chloro-6-methylpyridine-4-carboxylic acid</strong> (9.6 g, 56 mmol), ammonium chloride (8.9 g, 170 mmol), triethylamine (23 mL, 170 mmol), N-[3-(dimethylamino)propyl]-N'- ethylcarbodiimide hydrochloride (13 g, 67 mmol), 1-hydroxybenzotriazole (9.1 g, 67 mmol) and N,N- dimethylformamide (100 mL) was stirred at room temperature for 1 day. The reaction mixture was concentrated under reduced pressure, aqueous sodium bicarbonate solution was added to the obtained residue, and the mixture was extracted with ethyl acetate. The combined organic layer was washed with saturated brine and dried over anhydrous magnesium sulfate, and the insoluble material was filtered off. The obtained residue was washed with diisopropyl ether to give the title compound (5.6 g, 59%) as a pale- brown solid.[00681] 1H-NMR (DMSO-Cl6, 300 MHz) 5 2.51 (3H, s), 7.64 - 7.67 (2H, m), 7.81 (IH, br s). 8.25 (IH, br s). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate; N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 25℃; | To a solution of <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> (1 g) in DMF (200 ml) at 25 C. was added DIPEA (2.9 mL) and TBTU (1.8 ml). After 5 min, dimethylamine (0.75 g) was added dropwise. This was stirred overnight. The reaction was added to water and extracted with EtOAc. The organic layer was separated, dried and concentrated in vacuum. Flash:chromatography (9:1 to 2:8 gradient cyclohexane:EtOAc) afforded the title compound (320 mg). Rf=0.56 (1:1 cyclohexane:EtOAc) | |
Step 1 : <strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> [Lit.: Sperber et al., JACS 1959, 81 , 704-707] (96.1 g) is suspended in toluene (480 ml) and DMF (0.5 ml) is added. After warming to 85C SOCI2 (61 .5 ml) is dosed. The reaction mixture is heated to reflux for 1 .5h and then cooled to room temperature. After removal of solvent and excess reagent in vacuum, the residue is co-distilled with toluene (2 x 200 ml) and finally dissolved in toluene (300 ml). Afterwards, the above prepared solution is added to a mixture of Me2NH (2M solution in THF, 336 ml) and NEt3 (94 ml) at below 10C. The mixture is warmed to room temperature and stirred for an additional 30 minutes. Water (300 ml) is added and the mixture is extracted with toluene (3 x 200 ml). The combined organic phases are washed with brine (1 x 200ml), dried over Na2SO4, filtered and evaporated. The oily residue is treated with n-heptane (288 ml) and seeds are added. After stirring 30 minutes at room temperature, the precipitate is filtered off, washed and dried in vacuum to yield intermediate 112 [93.7 g, m.p. : 85 +/- 3C, Rf = 0.22 (TLC, silica, PE/EtOAc = 1 : 1 )]. | ||
<strong>[25462-85-5]2-Chloro-6-methyl-isonicotinic acid</strong> [Lit.: Sperber et al., JACS 1959, 81, 704-707] (96.1 g) is suspended in toluene (480 ml) and DMF (0.5 ml) is added. After warming to 85 C. SOCl2 (61.5 ml) is dosed. The reaction mixture is heated to reflux for 1.5 h and then cooled to room temperature. After removal of solvent and excess reagent in vacuum, the residue is co-distilled with toluene (2×200 ml) and finally dissolved in toluene (300 ml). Afterwards, the above prepared solution is added to a mixture of Me2NH (2M solution in THF, 336 ml) and NEt3 (94 ml) at below 10 C. The mixture is warmed to room temperature and stirred for an additional 30 minutes. Water (300 ml) is added and the mixture is extracted with toluene (3×200 ml). The combined organic phases are washed with brine (1×200 ml), dried over Na2SO4, filtered and evaporated. The oily residue is treated with n-heptane (288 ml) and seeds are added. After stirring 30 minutes at room temperature, the precipitate is filtered off, washed and dried in vacuum to yield intermediate I12 [93.7 g, m.p.: 85+/-3 C., Rf=0.22 (TLC, silica, PE/EtOAc=1:1)]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium sulfide; ammonia; copper(II) sulfate; In water; at 155℃;Autoclave; | 2-chloro-6-methylnicotinic acid (9 g), of aq ammonia (44 ml), of Cu(II)SO4 (0.9 g) and of sodium sulphide (0.32 g) were added to an autoclave and heated to 155 C. overnight. The crude product was suspended in water to yield product 115 (3.6 g). The filtrate was concentrated and again suspended in water to yield a further 1.9 g of product 115. HPLC: Rt=0.37 min (method D) | |
With sodium sulfide; ammonia; copper(II) sulfate; at 155℃; | Step a: <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (9 g), of aq ammonia (44 ml), ofCu(ll)S04 (0.9 g) and of sodium sulphide (0.32 g) are added to an autoclave and heated to 155C overnight. The crude product is suspended in water to yield 2- amino-6-methylisonicotinic acid (3.6 g). HPLC: Rt = 0.37 min (method D) | |
With ammonia;sodium sulfide; copper(II) sulfate; In water; at 155℃;autoclave; | <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (9 g), of aq ammonia (44 ml), of Cu(II)SO4 (0.9 g) and of sodium sulphide (0.32 g) are added to an autoclave and heated to 155 C. overnight. The crude product is suspended in water to yield 2-amino-6-methylisonicotinic acid (3.6 g). HPLC: Rt=0.37 min (method D) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
[0423] To 0.500 g (2.91 mmol) 2-chloro-6-methyl-isonicotinic acid in 5.0 niL of anhydrous methylene chloride and 0.5 mL of anhydrous DMF was added 0.47 g (3.5 mmol) 1-hydroxybenzotriazole hydrate. The reaction mixture was stirred for 20 minutes at O0C. l-(3-Dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (0.67 g, 3.5 mmol) was added to the reaction mixture. Stirring was continued for 1 hour allowing the reaction mixture to slowly warm up to room temperature. The reaction mixture was re- cooled to O0C and 0.750 g (5.8 mmol) of diisopropylethylamine and 0.340 g (3.5 mmol) of O,N-dimethyl-hydroxylamine were added. The reaction mixture was allowed to warm to room temperature and was stirred overnight. The reaction mixture was diluted with water and extracted with 5OmL of methylene chloride. The organic phase was washed with water, and brine, dried over anhydrous sodium sulfate, filtered and concentrated. The crude product was chromatographed on silica gel using 5:1 hexane:ethyl acetate to give 360 mg of the 2-chloro-N-methoxy-6,N-dimethyl-isonicotinamide. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate; N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 20℃; for 22h;Inert atmosphere; | General procedure: 2-Bromo-isonico-tinic acid (0.92 g, 4.5 mmol), TBTU (1.6 g, 5.0 mmol) and DIPEA (1.1 g, 8.3 mmol) were added to a solution of 4 (1.0 g, 4.1 mmol) in DMF (10 mL) and the reaction mixture was stirred at rt for 22 h. Water was added to give a precipitate which was filtered to give the intermediate amide (1.7 g, 96%). The amide (62 mg, 0.15 mmol) was dissolved in CH3CN (3 mL) and treated with phenylboronic acid (32 mg, 0.26 mmol), Pd(OAc)2 (14 mg, 0.06 mmol), and a 1 M aqueous solution of NaHCO3 (1 mL). The reaction mixture was sealed, degassed with nitrogen for 15 min, and heated in a microwave reactor at 150 C for 10 min. The solvent was concentrated in vacuo to leave a residue. The residue was dissolved in CH2Cl2 and washed with a saturated aqueous solution of NaHCO3 and then dried using a phase separator. The solvent was concentrated in vacuo to leave a residue which was purified by flash chromatography, using EtOAc/heptane (2:1) + 1% Et3N as eluent, to give the title compound as a white solid (33 mg, 53%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine; In dichloromethane; at 20℃; for 72h; | Example 4.3: (S)-2-chloro-N.6-dimethyl-N-(4-(1-methyl-1H-pyrrole-2-carboxamido)-1- phenylbutan-2-vhisonicotinamide1-Methyl-1H-pyrrole-2-carboxylic acid ((S)-3-methylamino-4-phenyl-butyl)-amide hydrochloride (100 mg, 0.31 mmol), <strong>[25462-85-5]2-chloro-6-methylisonicotinic acid</strong> (53 mg, 0.31 mmol), HOBt (74 mg, 0.466 mmol), EDC x HCI (72 mg, 0.37 mmol), and triethylamine (0.108 ml, 0.78 mmol) were dissolved in DCM (3 ml) and stirred at rt for 72 h. The mixture was concentrated and the crude product was purified by chromatography (Flashmaster, DCM to DCM:EtOAc 1 :1 over 15 min) to yield 119 mg (87 %) of the title compound as pink solid. [1 H-NMR (DMSO, 600 MHz) 7.96-7.91 (m, 1 H), 7.35-7.22, 7.10-7.06 (2m, 5H), 6.88 (d, 1 H), 6.88-6.82 (m, 1 H), 6.71/6.63 (d, 1 H), 6.25-6.01 (br. s, 1 H), 6.01-5.97 (m, 1H), 4.87-4.81/3.52-3.46 (m, 1 H), 3.81/3.76 (s, 3H), 3.30-3.22/3.06-3.00 (m, 2H), 2.99/2.63 (s, 3H), 2.85-2.77 (m, 2H), 2.42/2.12 (s, 3H), 1.91-1.76 (m, 2H); LCMS Rtc = 1.763 min; [M+H]+ = 439.0]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
52.9% | With N-ethyl-N,N-diisopropylamine;2,4,6-tripropyl-1,3,5,2,4,6-trioxatriphosphinane-2,4,6-trioxide; In tetrahydrofuran; ethyl acetate; for 4h;Reflux; | Example 81 2-Chloro-6-methyl-N-(2-phenylimidazo[1,2-a]pyrimidin-7-yl)isonicotinamide A mixture of 2-phenylimidazo[1,2-a]pyrimidin-7-amine (141 mg, 0.671 mmol, 1 eq.), 2-chroro-6-methylisonicotinic acid (127 mg, 0.738 mmol, 1.1 eq.), propylphosphonic anhydride in ethyl acetate 50% (0.98 ml, 1.68 mmol, 2.5 eq) and ethyldiisopropylamine (0.47 ml, 2.68 mmol, 4 eq) in tetrahydrofurane (10 ml) is refluxed for 4 hours. The mixture is diluted with ethyl acetate and washed with sat. aqueous sodium bicarbonate, twice with water, dried over magnesium sulfate and the solvent is removed in vacuo. Purification of the residue by chromatography on a 20 g Silicycle silica cartridge using ethyl acetate a eluent affords 2-chloro-6-methyl-N-(2-phenyl-imidazo[1,2-a]pyrimidin-7-yl)-isonicotinamide (129 mg, 52.9%) as a yellow solid (cryst. form heptane/ethlyl acetate 7/3). MS: m/e=364.0 (M+H+), mp.: 148-151 C. |
A mixture of 2-phenylimidazo[l,2-a]pyrimidin-7-amine (141 mg, 0.671 mmol, 1 eq.), 2-chroro- 6-methylisonicotinic acid (127 mg, 0.738 mmol, 1.1 eq.), propylphosphonic anhydride in ethyl acetate 50% (0.98 ml, 1.68 mmol, 2.5 eq) and ethyldiisopropylamine (0.47 ml, 2.68 mmol, 4 eq) in tetrahydrofurane (10 ml) is refluxed for 4 hours. The mixture is diluted with ethyl acetate and washed with sat. aqueous sodium bicarbonate, twice with water, dried over magnesium sulfate and the solvent is removed in vacuo. Purification of the residue by chromatography on a 20 g Silicycle silica cartridge using ethyl acetate a eluent affords 2-chloro-6-methyl-N-(2-phenyl- imidazo[l,2-a]pyrimidin-7-yl)-isonicotinamide (129 mg, 52.9%) as a yellow solid (cryst. fom heptane / ethlyl acetate 7/3). MS: m/e = 364.0 (M+H+), mp.: 148-15PC. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With bis-triphenylphosphine-palladium(II) chloride; potassium carbonate; In water; N,N-dimethyl-formamide; at 90.0℃;Inert atmosphere; | [0079] 1.0g of compound 6 (2-chloro-6-methyl-4-picolinic acid, from Hangzhou Banghua Imp. &Exp. Co. Ltd.), 2.4gof <strong>[493035-82-8]4-hydroxyl-2-methyl-phenylboronic acid</strong> as well as K2CO3 and Pd(PPh3)Cl2 were added to a reaction flask with N2protection, followed by sequentially adding H2O, DMF, and heated to 90C, tracked by TLC. After the reaction wascompleted, the system was filtered. The filter cake was washed with water. The filtrate was added with water and theaqueous phase was washed with ethyl acetate and adjusted to be acidic with hydrochloric acid to precipitate a yellowsolid. The yellow solid was obtained by filtration and recrystallized with ethanol to obtain a light yellow solid (compound 8). | |
With bis-triphenylphosphine-palladium(II) chloride; potassium carbonate; In water; N,N-dimethyl-formamide; at 90.0℃;Inert atmosphere; | 1.0 g of compound 6 (2-chioro-6-methyl-4-pi- colinic acid, from Hangzhou l3anghua Imp. &Exp. Co. Ltd.), 2.4 g of <strong>[493035-82-8]4-hydroxyl-2-methyl-phenylboronic acid</strong> as well as K2C03 and Pd(PPh3)C12 were added to a reaction flask with N2 protection, followed by sequentially adding H20, DMF, and heated to 90 C., tracked by TLC. Afier the reaction was completed, the system was filtered. The filter cake was washed with water. The filtrate was added with water and the aqueous phase was washed with ethyl acetate and adjusted to be acidic with hydrochloric acid to precipitate a yellow solid. The yellow solid was obtained by filtration and recrystallized with ethanol to obtain a light yellow solid (compound 8). |
Tags: 25462-85-5 synthesis path| 25462-85-5 SDS| 25462-85-5 COA| 25462-85-5 purity| 25462-85-5 application| 25462-85-5 NMR| 25462-85-5 COA| 25462-85-5 structure
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