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CAS No. : | 2577-46-0 | MDL No. : | MFCD07698610 |
Formula : | C7H15NO2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | YXMMTUJDQTVJEN-WDSKDSINSA-N |
M.W : | 145.20 | Pubchem ID : | 75735 |
Synonyms : |
|
Signal Word: | Warning | Class: | |
Precautionary Statements: | P261-P272-P280-P302+P352-P333+P313-P362+P364-P501 | UN#: | |
Hazard Statements: | H317 | Packing Group: | |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | Stage #1: methanol With thionyl chloride at -15 - 0℃; for 1h; Stage #2: L-isoleucine for 3h; Reflux; | |
96% | With hydrogenchloride | |
95% | With thionyl chloride at 0℃; for 12h; Reflux; | 2 Synthesis of methyl L-isoleucinate (2): L-isoleucine 1 (20.0 g, 152.6 mmol) was taken in MeOH (200 mL) in a 500 rriL round bottom flask and cooled it down to 0°C. To it was added SOCl2 (56 mL, 763.3 mmol) and the reaction mixture was refluxed for 12h. It was then evaporated to dryness and triturated with pentane (50 mL) and ether (50 mL) separately. This was finally dried under high vaccum which affored a white solid 2 (21.1 g, 95%). This was then used in the next step without any further purification. 1H NMR (400 MHz, DMSO-de): δ 8.69 (s, 2H), 3.89 (d, J = 12.0 Hz, 1H), 3.73 (s, 3H), 1.95 (m, 1H), 1.40- 1.51 (m, 1H), 1.21-1.32 (m, 1H), 0.98 (d, J = 6.8 Hz, 6H). |
92% | With thionyl chloride at 0 - 20℃; | |
87% | With thionyl chloride at -15 - 20℃; | |
82.57% | With thionyl chloride at 8 - 10℃; Reflux; | 4.4. Synthesis of amino acid methyl ester hydrochloride General procedure: About 0.01-0.03 mol of L-amino acid (glycine, leucine, alanine, methionine,phenylalanine, isoleucine) were added to the reaction bottle and 25mLwater-free methanol was added. Under the cooling of ice water bath, slowlyadd (0.03-0.06) mol of thionyl chloride at 8-10 °C, continue to react for1-2 h after the addition, and then slowly reflux for 4-5 h. TLC trackingdetection, the developing agent was V (dichloromethane): V (methanol) 6:1, and ninhydrin was developed. After the reaction was completed, thesolvent was distilled off with an excess of thionylchloride, and then recrystallizedfrom methylene chloride and petroleum ether to give a white solid. |
59% | With acetyl chloride at 0 - 20℃; for 6h; Inert atmosphere; | |
53% | Stage #1: methanol With thionyl chloride at 0℃; Stage #2: L-isoleucine In methanol at 0 - 20℃; | |
With thionyl chloride | ||
With thionyl chloride at 0℃; | ||
With thionyl chloride | ||
With thionyl chloride at 70℃; for 2h; | Preparation of the amino acid derivatives 11-18, A general procedure General procedure: l-amino acid (5.6 mmol) was added into 10 mL mixed solution of SOCl2/CH3OH (1:10) and refluxed at 70 °C for 2 h. The solution was concentrated in vacuo and added hydrazine (27.2 mL, 561 mmol) and CH3OH (50 mL), and then stirred at rt for 12 h. The solution was concentrated in vacuo, and finally purified by column chromatography (10:1 CH2Cl2/CH3OH), affording l-amino acid derivative as white solid. | |
With hydrogenchloride | ||
With thionyl chloride for 6h; | ||
With hydrogenchloride at 100℃; for 0.5h; | ||
With thionyl chloride | ||
With hydrogenchloride at 100℃; for 2h; | ||
With thionyl chloride at 0 - 25℃; for 18.5h; | General procedure: To a dried methanol (50 mL) solution of 4 (3.3 g, 20 mmol), thionyl chloride (3.57 g, 30 mmol) was slowly added over 30 minat 0 °C, and then, the solution was maintained at room temperature for 18 h. The solvent was evaporated to obtain a solid in quantitative yield, which was dissolved in dichloromethane (120 mL), and triethylamine (12.1 g, 120 mL) and di-tert-butyldicarbonate (9.6 g, 40 mmol) were added to the dichloromethane solution. The reaction mixture was stirred at 25 °C for 24 h. Afterc ompletion of the reaction, the solution was washed with phosphoric acid (50 x 3 mL), saturated sodium bicarbonate (50 x 3 mL) and saturated sodium chloride (50 x 3 mL), dried over anhydrous sodium sulfate, filtered and evaporated under reduced pressure to afford a solid to which lithium aluminum hydride (13 mmol) in the presence of dried tetrahydrofuran (25 mL) was added at 0 °C. The reaction mixture was maintained at room temperature for 4 h, and then water was added until the lithium aluminum hydride reacted completely. Next, the solution was filtered, and the residue was washed with tetrahydrofuran (20 x 2 mL).The combined organic solvent phase was evaporated under reduced pressure to yield the crude product, which was purified using column chromatography (petroleum ether/acetone) to afford 5a-5g. | |
With thionyl chloride at 0 - 20℃; for 24h; | ||
With acetyl chloride | 5.1 (1) 100ml flask in L-Isoleucine (1g), acetyl chloride (2ml), followed by stirring by the addition of Methyl alcohol (7ml). After the reaction was evaporated under reduced pressure to obtain a precursor 14-1. | |
With chloro-trimethyl-silane | 3.1.2. General Procedure for Esterication of Amino Acids Methyl esters of d-Ile and O-benzyl-Ser derivatives were prepared as described in Li and Sha [38]using 2 mmol of amino acid, 0.5 mL of trimethylsilyl chloride (TMSCl), and 10 mL of methanol. Thereaction mixture was evaporated to dryness and stored in a desiccator. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With 1-hydroxy-pyrrolidine-2,5-dione; dicyclohexyl-carbodiimide In various solvent(s) at 0℃; | |
With dicyclohexyl-carbodiimide; acetonitrile |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With thionyl chloride; at 75℃; for 12h;Reflux; | General procedure: A mixture of amino acid (1 mmol) and thionyl chloride (1.5 mmol) in 30 mL methanol and the contents were refluxed at 75 C for 12 h. The reaction mixture was cooled to RT and methanol was distilled and product was dried under vacuum. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With dicyclohexyl-carbodiimide In dichloromethane | ||
With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 0 - 20℃; | 53A Methyl N-(tert-butoxycarbonyl)glycyl-L-isoleucinate Methyl L-isoleucinate (3.00 g, 20.7 mmol) and N-(tert-butoxycarbonyl)glycine (3.98 g, 22.7 mmol) were dissolved in DMF (20 mL). This solution was cooled to 0-5°C in an ice bath. N,N-diisopropylethylamine (3.6 mL, 21 mmol), 1H-benzotriazol-1-ol hydrate (316 mg, 2.07 mmol) and 1-(3-dimethylaminopropyl)- 3-ethylcarbodiimidhydrochloride (4.36 g, 22.7 mmol) were added and the mixture was stirred at room temperature. The reaction mixture was quenched with concentrated aqueous ammonium chloride and ex- tracted with three portions of ethyl acetate. The combined organic extracts were dried over anhydrous magnesium sulfate and concentrated. The crude product was purified by chromatography on silica gel (cyclohexane / ethyl acetate 0 % to 10 %) to give the title compound, 5.40 g (90 % purity, 78 % yield). LC-MS (Method 11): Rt = 1.13 min; MS (ESI pos): m/z = 247 [M-tBu]+ H-NMR (400 MHz, DMSO-d6) d [ppm]: 0.819 (4.90), 0.835 (8.09), 0.853 (2.63), 1.152 (0.40), 1.174 (0.45), 1.354 (1.52), 1.375 (16.00), 1.459 (0.46), 3.561 (0.84), 3.571 (0.98), 3.577 (1.45), 3.594 (0.81), 3.630 (11.35), 4.220 (0.63), 4.237 (0.78), 4.240 (0.82), 4.257 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | Stage #1: t-Boc-L-valine With ethyl 2-cyano-2-(2-nitrobenzenesulfonyloxyimino)acetate; N-ethyl-N,N-diisopropylamine In dichloromethane at 20℃; for 0.0833333h; Stage #2: L-isoleucine methyl ester In dichloromethane at 20℃; for 4h; | |
82% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide | |
79.84% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at 20℃; for 48h; |
With 4-methyl-morpholine; isobutyl chloroformate In tetrahydrofuran |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide | |
81% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane for 16h; | |
72% | Stage #1: N-(tert-butyloxycarbonyl)-L-isoleucine; L-isoleucine methyl ester With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate In dichloromethane; N,N-dimethyl-formamide for 0.166667h; Stage #2: With triethylamine In dichloromethane; N,N-dimethyl-formamide at 20℃; for 14h; | 2 Synthesis of methyl (tert-butoxycarbonyl)-L-isoleucyl-L-isoleucinate (4): To a stirred solution of (teri-butoxycarbonyl)-L-isoleucine 3 (13 g, 0.056 mol) and methyl L- lsoleucinate 2 (10.21 g, 0.056 mol) in DCM:DMF (200 mL, 1 : 1), HBTU (23.36 g, 0.061 mol) was added and the reaction mixture was stirred for 10 min. To this reaction mixture Et3N (19.4 mL, 0.14 mol) was added very slowly in order to control the exothermic reaction. The mixture was then stirred at rt and monitored by TLC analysis. After 14h, water (200 mL) was added to it and extracted with ethyl acetate (2 x 200 mL). The combined organic layer was washed with ice cold water (3 x 50 mL) and saturated NaHCC solution (3 x 50 mL). It was dried over anhydrous Na2S04 and concentrated under reduced pressure. The resulting crude residue was purified by flash chromatography on silica gel (100-200 mesh) using 20% EtOAc-hexane as an eluent to obtain 4 (14.6 g, 72%) as a white solid. . 1H NMR (400 MHz, CDC13): δ 6.33 (m, 1H), 5.01 (m, 1H), 4.58 (m, 1H), 3.93 (m, 1H), 3.73 (s, 3H), 1.89 (m, 2H), 1.79 (m, 2H), 1.44 (s, 9H), 0.94 (m, 12H). ELSD: 303.2 [M+H-56]; 99.85% (purity). |
With dicyclohexyl-carbodiimide In pyridine; dichloromethane at 0 - 20℃; | ||
With 4-methyl-morpholine; benzotriazol-1-ol; dicyclohexyl-carbodiimide In ethyl acetate at 20℃; for 2h; Inert atmosphere; | ||
With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dichloromethane at -10℃; for 2h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | With potassium fluoride; 18-crown-6 ether In N,N-dimethyl-formamide for 8h; Ambient temperature; | |
87% | With sodium azide In N,N-dimethyl-formamide at 50℃; for 3h; | |
79% | With triethylamine; 1-butyl-3-methylimidazolium Tetrafluoroborate In neat (no solvent) at 25℃; Green chemistry; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With dmap In dichloromethane at 25℃; for 0.166667h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
81% | With dicyclohexyl-carbodiimide In tetrahydrofuran at 0 - 20℃; for 20h; | tert-Butoxycarbonyl-L-leucyl-L-isoleucine methyl ester (1) General procedure: To a solution of 23.13 g (100 mmol) tert-butoxycarbonyl-L-leucine in 150 mL of THF cooled to 0 °C at vigorous stirring were added in succession solutions of 21.63 g (105 mmol) of dicyclohexylcarbodiimide in 150 mL of THF and 15.97 g (110 mmol) of L-isoleucine methyl ester in 100 mL of THF. The reaction mixture was warmed to room temperature, and the stirring was continued for 20 h. The separated precipitate was filtered off, the solvent was removed at a reduced pressure, the reaction product was extracted from the residue with ethyl ether, the solution obtained was filtered, the solvent was removed at a reduced pressure, residue was washed with cold hexane and dried in a vacuum. Yield 29.04 g (81%), mp 118-120 °, [α]D20 -32° (c 3, MeOH). IR spectrum, ν, cm-1: 1752, 1688, 1655(C=O), 1555, 1527 (N-Hamide). 1H NMR spectrum (CDCl3), δ, ppm: 0.77-0.86 m (12H, 4CH3), 1.05-1.12 m (1H, CH), 1.34 s (9H, 3CH3), 1.55-1.62 m (4H, 2CH2), 1.77-1.82 m (1H, CH), 3.63 s (3H, CH3), 4.05-4.11 m (1H, CH), 4.42-4.46 m (1H, CH). 13C NMR spectrum (CDCl3), δ, ppm: 11.29, 15.19, 21.93, 22.63, 24.47, 24.79, 28.09, 37.56, 40.61, 51.77, 52.83, 56.23, 79.63, 155.59, 171.95, 172.34. Found, %: C 60.53; H 9.81; N 7.62. C18H34N2O5. Calculated, %: C 60.31; H 9.56; N 7.81. |
With dicyclohexyl-carbodiimide In pyridine; dichloromethane at 0 - 20℃; | ||
With 4-methyl-morpholine; benzotriazol-1-ol; dicyclohexyl-carbodiimide In ethyl acetate at 20℃; for 2h; Inert atmosphere; |
With benzotriazol-1-ol; dicyclohexyl-carbodiimide In dichloromethane; N,N-dimethyl-formamide at 20℃; Cooling with ice; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | With 4-methyl-morpholine In dichloromethane at -15 - 20℃; for 12h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane at 20℃; for 1.08h; | General procedure for coupling reaction: General procedure: the methyl ester of the C-terminal amino acid (1 eq) and the Boc-protected N-terminal amino acid (1.1 eq) were dissolved in dry solvent CH2Cl2 (15 mL), followed by addition of DMAP (1 eq). The reaction mixture was stirred for 5 min at rt whereupon EDC (1.3 eq) was added. The reaction was there after stirred for 1 h at rt. The reaction mixture was then washed with H2O. The aqueous layer was extracted with AcOEt. The organic layer was dried on MgSO4, concentrated in vacuo and the crude product was purified by flash chromatography. |
78% | With dicyclohexyl-carbodiimide In pyridine; dichloromethane at 0 - 20℃; for 4.5h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate In dichloromethane for 0.0833333h; | |
With dicyclohexyl-carbodiimide In pyridine; dichloromethane at 0 - 20℃; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With O-(1H-benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 20℃; | |
With O-(benzotriazol-1-yl)-N,N,N',N'-tetramethyluronium tetrafluoroborate; N-ethyl-N,N-diisopropylamine; HATU In dichloromethane at 20℃; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
91% | With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dichloromethane at 25℃; for 17h; | |
91% | With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dichloromethane at 20℃; for 24h; | |
91% | With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dichloromethane at 25℃; for 24h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | Stage #1: (S)-1-(2-tert-butoxycarbonylaminoacetyl)pyrrolidine-2-carboxylic acid benzyl ester With hydrogen In methanol Stage #2: L-isoleucine methyl ester With benzotriazol-1-ol; dicyclohexyl-carbodiimide; trifluoroacetic acid Further stages.; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In ethyl acetate; N,N-dimethyl-formamide at 20℃; for 72h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In tetrahydrofuran at 0 - 20℃; for 18h; | |
90% | Stage #1: (3S)-2-tert-butoxycarbonyl-1,2,3,4-tetrahydro-beta-carboline-3-carboxylic acid With benzotriazol-1-ol In tetrahydrofuran at 0℃; for 0.166667h; Stage #2: L-isoleucine methyl ester With 4-methyl-morpholine; dicyclohexyl-carbodiimide In tetrahydrofuran at 0 - 20℃; for 18h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-ethyl-N,N-diisopropylamine In methanol at 65℃; for 48h; | 2.1 EXAMPLE 2Synthesis of Compound 3Step i[0155] To a solution of isoleucine methyl ester (4.0 g, 22.02 mmol) andDIEA (2.82 g, 22.02 mmol) in methanol (20 mL) 4-fluoro-2-nitrobenzoic acid(1.02 g, 5.50 mmol) was added. The mixture was stirred at 65 0C for 48 h and then evaporated to dryness, dissolved in ethyl acetate and washed with water three times and then with a saturated NaCI solution. The organic layer was dried over Mg2SO4 and the course of the reaction verified by LC-MS. | |
In methanol for 72h; Reflux; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | Stage #1: (S)-4-isopropyloxazolidine-2,5-dione With chloro-trimethyl-silane; triethylamine In tetrahydrofuran at -30℃; for 4.5h; Stage #2: methyl L-isoleucinate With triethylamine In tetrahydrofuran at 0℃; for 2h; regioselective reaction; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | In dichloromethane at 20℃; for 4h; | |
100% | With sodium hydrogencarbonate In dichloromethane; water at 25℃; for 4h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | Stage #1: N-Cbz-L-Phe With sodium azide; 2,4,6-tripropyl-1,3,5,2,4,6-trioxatriphosphinane-2,4,6-trioxide; triethylamine In tetrahydrofuran; dimethyl sulfoxide at 0℃; for 0.333333h; Stage #2: In tetrahydrofuran; toluene at 45℃; Sonication; Stage #3: L-isoleucine methyl ester In tetrahydrofuran; dichloromethane; toluene for 1h; Sonication; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | Stage #1: (3S)-2-tert-butoxycarbonyl-1,2,3,4-tetrahydroisoquinole-3-carboxylic acid With benzotriazol-1-ol; dicyclohexyl-carbodiimide In tetrahydrofuran at 0℃; Stage #2: L-isoleucine methyl ester With 4-methyl-morpholine In tetrahydrofuran at 20℃; for 12h; | 4.1.4. General procedure for preparing (S)-2-Boc-1,2,3,4-tetrahydroisoquinoline-3-carbonylamino acid methyl esters (3a-q) General procedure: At 0 °C and with stirring, to the solution of 0.256 g (0.924 mmol) of (S)-2-Boc-1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid, 2 mL of anhydrous THF 0.151 g (0.109 mmol) of HOBt was added, and stirred for 10 min. Then, 0.228 g (0.108 mmol) of DCC was added to form reaction mixture A. To the suspension of 0.102 mmol of HCl·AA-OMe in 4 ml of anhydrous THF, 1 mL of N-methylmorpholine was added and stirred at room temperature for 35 min to form reaction mixture B (pH 9). The reaction mixture A and B were combined, stirred at room temperature for 12 h, and TLC (ethyl acetate/petroleum ether, 1:3) indicated the complete disappearance of 3S-2-Boc-1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid. The formed precipitate of DCU was removed by filtration, and the filtrate was evaporated under vacuum. The residue was dissolved in 50 ml of ethyl acetate, the formed solution was washed successively with saturated aqueous solution of NaHCO3 (30 mL × 3), 5% aqueous solution of KHSO4 (30 mL × 3) and saturated aqueous solution of NaCl (30 mL × 3), and dried with anhydrous Na2SO4. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With triethylamine In dichloromethane at 20℃; for 0.5h; | 5.1.1.7. 6-Benzyloxycarbonylamino-2-(3-methoxycarbonylmethyl-ureido)-hexanoic acid methyl ester (3a) General procedure: To a mixture of N6-cbz-l-lyscine methyl ester hydrochloride (6.94 g, 21 mmol) in saturated NaHCO3 (80 mL) and DCM (80 mL) was added triphosgene (2.08 g, 7 mmol), and the reaction mixture was vigorously stirred under ice-water bath for 15 min and the organic layer was collected. The water layer was extracted with DCM for three times and the organic phase was combined and dried with MgSO4. After the solvent removed under vaccum, the residue was dissolved in DCM (20 mL). This solution was then added to the mixture of l-glycine methyl ester hydrochloride (2.64 g, 21 mmol) and triethylamine (2.12 g, 21 mmol). The reaction mixture was stirred at room temperature for 30 min and then the solvent was removed under low pressure. The residue was taken up with ethyl acetate (40 mL) and washed with 1 N HCl (10 mL) and brine (20 mL). The organic phase was dried with MgSO4 and compound 3a was obtained as yellow oil and separated by silica gel column chromatography (petroleum ether/ethyl acetate = 1:1) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
83% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at 20℃; Cooling with ice; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | In water at 110℃; for 0.0833333h; Microwave irradiation; Green chemistry; chemoselective reaction; | |
With triethylamine In dichloromethane at 25℃; for 12h; Inert atmosphere; | ||
With triethylamine In dichloromethane at 25℃; for 24h; | General procedure: To a dried methanol (50 mL) solution of 4 (3.3 g, 20 mmol), thionyl chloride (3.57 g, 30 mmol) was slowly added over 30 minat 0 °C, and then, the solution was maintained at room temperature for 18 h. The solvent was evaporated to obtain a solid in quantitative yield, which was dissolved in dichloromethane (120 mL), and triethylamine (12.1 g, 120 mL) and di-tert-butyldicarbonate (9.6 g, 40 mmol) were added to the dichloromethane solution. The reaction mixture was stirred at 25 °C for 24 h. Afterc ompletion of the reaction, the solution was washed with phosphoric acid (50 x 3 mL), saturated sodium bicarbonate (50 x 3 mL) and saturated sodium chloride (50 x 3 mL), dried over anhydrous sodium sulfate, filtered and evaporated under reduced pressure to afford a solid to which lithium aluminum hydride (13 mmol) in the presence of dried tetrahydrofuran (25 mL) was added at 0 °C. The reaction mixture was maintained at room temperature for 4 h, and then water was added until the lithium aluminum hydride reacted completely. Next, the solution was filtered, and the residue was washed with tetrahydrofuran (20 x 2 mL).The combined organic solvent phase was evaporated under reduced pressure to yield the crude product, which was purified using column chromatography (petroleum ether/acetone) to afford 5a-5g. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrazine hydrate In methanol at 20℃; for 12h; | Preparation of the amino acid derivatives 11-18, A general procedure General procedure: l-amino acid (5.6 mmol) was added into 10 mL mixed solution of SOCl2/CH3OH (1:10) and refluxed at 70 °C for 2 h. The solution was concentrated in vacuo and added hydrazine (27.2 mL, 561 mmol) and CH3OH (50 mL), and then stirred at rt for 12 h. The solution was concentrated in vacuo, and finally purified by column chromatography (10:1 CH2Cl2/CH3OH), affording l-amino acid derivative as white solid. | |
With hydrazine hydrate |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In dichloromethane at 20℃; | Method for synthesis of compound 13 and can be used for obtaining 11, 12, 14 - 39: In a solution of 13b (150 mg, 0.25 mmol) in DCM (8 ml), was added EDC-HCl (0.75 mmol), TEA (1.9 mmol), and methyl glutaminate (1.6 mmol). After stirring overnight at rt, the reaction mixture was diluted with DCM (40 ml), washed with water and brine. The organic layer was dried with Na2SO4 and concentrated in vacuum. The residue was chromatographed on Si-gel and reverse phase HPLC to yield compound 13 (120 mg, 64% yield). | |
With 4-methyl-morpholine; benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dichloromethane at 20℃; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
83% | With 1-hydroxy-7-aza-benzotriazole; N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide at 20℃; for 18h; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
36% | With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In dichloromethane at 0 - 20℃; | Syntheses of dipeptide (7) General procedure: A solution of N-(2-amioethyl)troponyl)glycine (6) (200 mg, 0.62 mmol) in anhydrous dichloromethane (10 mL) was cooled to 0 oC, and then EDC-HCl (142 mg, 0.744 mmol) was added, stirred for 5 min at 0oC. Then L-Phenylalanine methyl ester hydrochloride (160 mg, 0.744 mmol) and Triethylamine (0.26 mL, 1.86 mmol) was added together. This reaction mixture was continued to stirrer at room temperature (rt) for overnight. After completion of reaction, the reaction mixture was concentrated to dryness under reduced pressure. Concentrated reaction residue was re-dissolved in DCM (30 mL) and then washed with water thrice (3*30mL) followed by saturated sodium bicarbonate (20 mL) by following extraction method. The washed organic layers were combined together and concentrated under reduced pressure and then loaded on silicagel column for purification by EtOAc/Hexane to obtain desired product (7). The major component was isolated with EtOAc/Hexane (30:70) and characterized as desired product (120 mg, 40%) by 1H/13C-NMR and Mass spectrometric method. |
With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In N,N-dimethyl-formamide at 0 - 20℃; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | With copper(l) iodide; 2-(2-methyl-1-oxopropane)cyclohexanone; caesium carbonate In N,N-dimethyl-formamide at 20℃; for 8h; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Stage #1: nonanoic acid With 1,1'-carbonyldiimidazole In tetrahydrofuran at 20℃; for 2h; Inert atmosphere; Stage #2: L-isoleucine methyl ester In tetrahydrofuran at 20℃; Inert atmosphere; | 3.2.5. Methyl 2-(Nonanoylamino)propanoate (N-Nonanoyl Alanine Methyl Ester) General procedure: Amide coupling was performed according to the method of Staab [46] and Staab et al. [47] using carbonyl diimidazole (CDI). To a stirred solution of nonanoic acid (322.9 μL, 2 mmol) in anhydrous THF (4.39 mL) under N2 was added CDI (324.3 mg, 2 mmol), causing effervescence from liberated CO2. Stirring was continued at room temperature for 2 h and methyl L-alaninate (279.2 mg, 2 mmol) was added, resulting in separation of a brown oily residue. Stirring at room temperature continued overnight, by which time a white precipitate had formed. The solvent was removed in vacuo, resulting in the formation of white crystals in an oily residue, which were then taken up in Et2O (10 mL), EtOAc (20 mL), and H2SO4 (1 M, 15 mL). The phases were separated and the organic phase was washed successively with H2SO4 (1 M, 3 × 15 mL), water (20 mL), and brine (20 mL). The organic phase was dried (MgSO4), filtered, and concentrated in vacuo, producing a white crystalline solid, (551.3 mg, 2.27 mmol, 113%) which was used crude in the subsequent reaction. A small portion was purified for characterisation by column chromatography on silica (80% CH2Cl2/EtOAc, Rf = 0.51) to give the title compound as a pale yellow powder, which was 98% pure (HPLC-MS), |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Stage #1: lauric acid With 1,1'-carbonyldiimidazole In tetrahydrofuran at 20℃; for 2h; Inert atmosphere; Stage #2: L-isoleucine methyl ester In tetrahydrofuran at 20℃; Inert atmosphere; | 3.2.5. Methyl 2-(Nonanoylamino)propanoate (N-Nonanoyl Alanine Methyl Ester) General procedure: Amide coupling was performed according to the method of Staab [46] and Staab et al. [47] using carbonyl diimidazole (CDI). To a stirred solution of nonanoic acid (322.9 μL, 2 mmol) in anhydrous THF (4.39 mL) under N2 was added CDI (324.3 mg, 2 mmol), causing effervescence from liberated CO2. Stirring was continued at room temperature for 2 h and methyl L-alaninate (279.2 mg, 2 mmol) was added, resulting in separation of a brown oily residue. Stirring at room temperature continued overnight, by which time a white precipitate had formed. The solvent was removed in vacuo, resulting in the formation of white crystals in an oily residue, which were then taken up in Et2O (10 mL), EtOAc (20 mL), and H2SO4 (1 M, 15 mL). The phases were separated and the organic phase was washed successively with H2SO4 (1 M, 3 × 15 mL), water (20 mL), and brine (20 mL). The organic phase was dried (MgSO4), filtered, and concentrated in vacuo, producing a white crystalline solid, (551.3 mg, 2.27 mmol, 113%) which was used crude in the subsequent reaction. A small portion was purified for characterisation by column chromatography on silica (80% CH2Cl2/EtOAc, Rf = 0.51) to give the title compound as a pale yellow powder, which was 98% pure (HPLC-MS), |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | With dicyclohexyl-carbodiimide In tetrahydrofuran at 0℃; for 36h; | N-Trifluoroacetyl-L-leucyl-L-isoleucine methylester (7) General procedure: To a solution of 11.36 g (50 mmol) of N-trifluoroacetyl-L-leucine in 100 mL of THF cooled to 0 °C at vigorous stirring were added in succession solutions of 10.3 g (50 mmol) of dicyclohexylcarbodiimide in 70 mL of THF and 7.99 g (55 mmol) of L-isoleucine methyl ester in 50 mL of THF. The reaction mixture was stirred for 36 h, filtered, and the solvent was removed at a reduced pressure. The residue was washed with hexane, dissolved in ethyl ether, the solution obtained was filtered, the solvent was removed at a reduced pressure, residue was washed with hexane and dried in a vacuum. Yield 13.46 g (76%), mp 134-135 °C, [α]D20 -48.5° (c 2.5, MeOH). IR spectrum, ν, cm-1: 1754, 1718, 1663 (C=O), 1563, 1547 (N-Hamide). 1H NMR spectrum (CDCl3), δ, ppm: 0.77-0.86 m (12H, 4CH3), 1.05-1.15 m (1H, CH), 1.55-1.65 m (4H, 2CH2), 1.76-1.82 m (1H, CH), 3.66 s (3H, CH3), 4.44-4.48 m (1H, CH), 4.67-4.72 m (1H, CH). 13C NMR spectrum (CDCl3), δ, ppm: 11.27, 15.13, 21.84, 22.52, 24.56, 25.01, 37.46, 40.92, 51.95, 52.14, 56.76, 115.71 q (JC-F 228.5 Hz), 157.24 q (J 31.7 Hz), 171.29, 171.86. Found, %: C 50.63; H 7.38; N 7.81. C15H25F3N2O4. Calculated, %: C 50.84; H 7.11; N 7.91. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With sodium hydrogencarbonate; 1-butyl-3-methylimidazolium Tetrafluoroborate In water at 25℃; for 0.133333h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | With sodium hydrogencarbonate; 1-butyl-3-methylimidazolium Tetrafluoroborate In water at 25℃; for 0.133333h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
2.92 g | With dicyclohexyl-carbodiimide In dichloromethane at 0 - 20℃; for 12h; | Boc-Aib-Ile-OMe (2) The IleOMe obtained from its hydrochloride (4.47 g, 24.63 mmol) was added to an ice-cooled solution of Boc-Aib-OH (2 g, 9.85 mmol) in 5 ml of DCM. Then DCC(3.04 g, 14.78 mmol) was added to the cooled mixture, which was stirred for 12 h at room temperature. The progress of the reaction was monitored by TLC. The residue was then taken into ethyl acetate and the DCU (N,N-dicyclohexylurea) was filtered off. The organic layer was washed with 2M HCl (3 x 100 mL), 1M sodium carbonate (3 x 100 mL) and brine (2 x 100 mL), dried over anhydrous sodium sulfate and evaporated in vacuo to obtain a white solid. The crude peptide was synthesized following similar procedure as that of dipeptide 1. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
75% | Stage #1: L-isoleucine methyl ester; di-<i>tert</i>-butyl dicarbonate With dmap In dichloromethane for 1h; Cooling with ice; Stage #2: 2,3,4,5-tetra-O-acetyl-D-glucopyranose In dichloromethane for 18h; Cooling with ice; | 9.1 (1) 4Ac-Glc-Ile-OMe; N-(2,3,4,6-tetra-O-acetyl-α/β-D-glucopyranosyloxycarbonyl)-L-isoleucine methyl ester L-isoleucine methyl ester hydrochloride (3.00 g, 16.5 mmol) was suspended in tetrahydrofuran (33 ml), and the suspension was cooled in an ice bath. To this suspension was added triethylamine (46.0 ml, 330 mmol), and the mixture was warmed to room temperature and stirred for 1 hr. The reaction solution was filtered, and concentrated to give L-isoleucine methyl ester (2.13 g, 14.7 mmol). (0234) BocO (4.48 g, 20.5 mmol) was dissolved in dichloromethane (69 ml), and the mixture was cooled in an ice bath. To this solution was added a solution of 4-(dimethylamino)pyridine (1.97 g, 16.1 mmol) in dichloromethane (69 ml) and a solution of L-isoleucine methyl ester (2.13 g, 20.5 mmol) in dichloromethane (69 ml), and the mixture was stirred at room temperature for 1 hr. The reaction solution was cooled again in an ice bath, a solution of 2,3,4,6-tetra-O-acetyl-D-glucose (7.17 g, 20.5 mmol) in dichloromethane (69 ml) was added, and the mixture was stirred for 18 hr. The reaction solution was concentrated under reduced pressure, and the residue was purified by silica gel column chromatography (gradient; hexane:ethyl acetate=82:18→50:50) to give 4Ac-Glc-Ile-OMe (5.72 g, 11.0 mmol, yield 75%, α:β ratio=1:1) as a white syrup-like substance. (0235) 1H-NMR (400 MHz, CDCl3) δ: 0.89-0.95(t, 6H, J=7.0 Hz), 1.13-1.27(m, 1H), 1.37-1.46(m, 1H), 1.86-1.94(m, 1H), 2.01-2.09(m, 12H), 3.73(s, 1.5H), 3.76(s, 1.5H), 3.80-3.84(m, 0.5H), 4.07-4.14(m, 1.5H), 4.25-4.36(m, 2H), 5.08-5.17(m, 2H), 5.25(t, 0.5H, J=5.2 Hz), 5.41(dd, 1H, J=5.4, 9.1 Hz), 5.47(t, 0.5H, J=5.5 Hz), 5.65(d, 0.5H, J=8.3 Hz), 6.24(d, 0.5H, J=3.7 Hz). (0236) ESIMS (m/z): 542.2 ([M+Na]+), 558.1 ([M+K]+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In dichloromethane at 20℃; for 14h; | 1 Synthesis of methyl ((7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl)-L- isoleucinate (8) To a stirred solution of (7Z,10Z,13Z,16Z,19Z)-Docosa-7,10,13,16,19- pentaenoic acid 7 (9.3 g, 0.028 mol) and methyl L-isoleucinate (5.62 g, 0.03 mol) in DCM (150 mL), HOBt (6.43 g, 0.042 mmol), EDC.HC1 (8 g, 0.042 mol) and DIPEA (13.85 mL, 0.084 mol) were added sequentially. The reaction mixture was then stirred at rt for 14h. After TLC showed completion, water (100 mL) was added and separated the layers. The aqueous layer was extracted with EtOAc (2 x 100 mL). The combined organic layer was dried over Na2S04 and concentrated under reduced pressure. The crude residue was purified by flash chromatography on silica gel (100-200 mesh) using 20% EtOAc-hexane as an eluent to obtain 8 (10.4 g, 78%) as a yellow liquid. 1H NMR (400 MHz, CDC13): δ 5.90 (d, 7 = 5.6 Hz, 1H), 5.35 (m, 10H), 4.62 (dd, 7 = 4.8 Hz, 1H), 3.73 (s, 3H), 2.82 (m, 8H), 2.22 (t, 7 = 7.8 Hz, 2H), 2.08 (m, 4H), |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
31% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 0 - 20℃; for 5.5h; Inert atmosphere; | 7.6.1. General procedure for monoamino acid adducts (7a-h) General procedure: To a stirred solution of 15 (50 mg, 0.14 mmol) in dry DMF(0.5 mL) at 0 C under N2 atmosphere, the appropriate L-amino acidmethyl ester (0.15 mmol), EDC (27 mg, 0.14 mmol), HOBt (19 mg,0.14 mmol) and dry DIPEA (0.03 mL, 0.20 mmol) were added. Themixture was stirred 30 min at 0 C and then 5 h at room temperature.The reaction was quenched with water and then extractedwith AcOEt. The organic phase was washed with water, dried overNa2SO4, filtered and concentrated under reduced pressure. Thecrude residue was purified through flash chromatography on silicagel. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | With dichloro(dimethylglyoxime)(dimethylglyoximato)cobalt(III); 9-(2-mesityl)-10-methylacridinium perchlorate In acetonitrile at 20℃; for 24h; Inert atmosphere; Schlenk technique; Irradiation; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | With sodium carbonate In N,N-dimethyl-formamide at 20℃; for 0.333333h; | General Procedure A for the Synthesis of OA O-methylation amino acids conjugates (Compounds 2-11) General procedure: To Compound 1 (1 equiv.) and Na2CO3 (1.5 equiv.) stirring in 8mL DMF was added O-methylation amino acid (1.5 equiv.). The mixture was stirred at room temperature for 20min. After completion (TLC), the solvent was removed under reduced pressure. The mixture was resolved in AcOEt and washed with water and brine twice. The organic layer was dried over Na2SO4, then filtered and concentrated. The crude residue was purified by column chromatography. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | Stage #1: 2-pyrazylcarboxylic acid With 1,1'-carbonyldiimidazole In tetrahydrofuran at 60℃; for 1h; Stage #2: L-isoleucine methyl ester With triethylamine In tetrahydrofuran for 2h; | 3.1.1. General Procedure of Coupling Reaction General procedure: To a round bottom flask, 248 mg (2 mmol) of pyrazinoic acid (in the codes of final compoundsdenoted as PC) was suspended in anhydrous THF (3 mL), 324 mg (2 mmol) of CDI was added and themixture was heated to 60 °C and stirred for 1 h. Afterwards, the flask was cooled down to laboratorytemperature and 2 mmol of amino acid or amino acid ester (mostly in hydrochloride form) was addedto the mixture with 300 L (2.14 mmol) of triethylamine. After the addition, the mixture reactedfor 2 h at laboratory temperature and was evaporated on a rotary evaporator. The solid residuewas suspended in water (10 mL) and extracted to ethyl acetate (EtOAc) using repetitive extractions(typically twice with 15 mL) in separatory funnel. After each separation, the presence of the productin the phases was monitored on a TLC (silica, methanol-EtOAc 1:1). Finally, the organic layers werecombined and washed with 10 mL of 0.01MHCl and 10 mL of saturated NaCl solution. At the end, theorganic phases were mixed with approximately 50 mg of activated carbon, stirred for 10 min, filteredand evaporated to dryness. The final product was left in the desiccator overnight and purified furtherusing flash chromatography if necessary. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | Stage #1: Nα-dipicolinoyl-bis[L-Phe-L-ILe]acid With 4-methyl-morpholine; chloroformic acid ethyl ester In dichloromethane at -15℃; for 0.333333h; Stage #2: L-isoleucine methyl ester In dichloromethane at -15 - 20℃; for 15h; | 3.1.1. Synthesis of Nα-dipicolinoyl-bis[tripeptide methyl ester] derivatives (2a-c) General procedure: To a cold -15 oC) suspension of Nα-dipicolinoyl-bis[dipeptide-carboxylic acid] (1a-c) [29](1 mmol) and N-methylmorpholine (0.2 mL, 2 mmol) in dichloromethane (25 mL), ethyl chloroformate(0.2 mL, 2 mmol) was added with stirring at the same temperature (-15 oC). The reaction mixture was stirred for 20 min. Then, a cold dichloromethane solution (20 mL) of the free amino acid methyl ester of L-Phe and/or L-ILeu (2 mmol) was added, with stirring for 3 h at -15 oC and then for 12 h at room temperature. The reaction mixture was washed with water, 1 N sodium bicarbonate,and 1 N hydrochloric acid and water, and dried over anhydrous calcium chloride. The solvent wasevaporated under reduced pressure; the obtained residue was triturated with dry ether/n-hexanemixture. The obtained solid was filtered off and crystallized from ethanol/n-hexane to give thecorresponding bis-esters (2a-c), respectively. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
73% | Stage #1: C37H45N5O8 With 4-methyl-morpholine; chloroformic acid ethyl ester In dichloromethane at -15℃; for 0.333333h; Stage #2: L-isoleucine methyl ester In dichloromethane at -15 - 20℃; for 15h; | 3.1.1. Synthesis of Nα-dipicolinoyl-bis[tripeptide methyl ester] derivatives (2a-c) General procedure: To a cold -15 oC) suspension of Nα-dipicolinoyl-bis[dipeptide-carboxylic acid] (1a-c) [29](1 mmol) and N-methylmorpholine (0.2 mL, 2 mmol) in dichloromethane (25 mL), ethyl chloroformate(0.2 mL, 2 mmol) was added with stirring at the same temperature (-15 oC). The reaction mixture was stirred for 20 min. Then, a cold dichloromethane solution (20 mL) of the free amino acid methyl ester of L-Phe and/or L-ILeu (2 mmol) was added, with stirring for 3 h at -15 oC and then for 12 h at room temperature. The reaction mixture was washed with water, 1 N sodium bicarbonate,and 1 N hydrochloric acid and water, and dried over anhydrous calcium chloride. The solvent wasevaporated under reduced pressure; the obtained residue was triturated with dry ether/n-hexanemixture. The obtained solid was filtered off and crystallized from ethanol/n-hexane to give thecorresponding bis-esters (2a-c), respectively. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With N-ethyl-N,N-diisopropylamine In dichloromethane at 0 - 20℃; for 3h; | 4.1.1 General procedures for the synthesis of sulfonamide amino acid methyl esters (4a-e) General procedure: In a 50mL round bottom flask equipped with a stir bar was added bromobenzene sulfonyl chloride (3.30mmol) and the appropriate amino acid methyl ester (3.30mmol) in DCM (12mL) at 0°C. N,N-Diisopropylethylamine (1.2mL, 9.90mmol) was then added to the solution. The mixture was stirred for 3h at room temperature. The reaction mixture was quenched with water and extracted with DCM. The extracts were washed with 1M HCl and dried over anhydrous magnesium sulfate. The mixture was concentrated in vacuo to give the crude product. The product was purified by column chromatography with DCM to yield the pure product. The product was characterized by 1H and 13C NMR. 4.1.2 (2S,3S)-methyl 2-(3-bromophenylsulfonamido)-3-methylpentanoate (4a) 3-Bromobenzene sulfonyl chloride (3.30mmol) and l-isoleucine methyl ester (3.30mmol) were reacted similar to 4.1.1 to yield: 1.2044g (100%). 1H NMR (400MHz, Chloroform-d) δ 7.97 (t, J=1.9Hz, 1H), 7.77 (ddd, J=7.9, 1.8, 1.0Hz, 1H), 7.70 (ddd, J=8.1, 2.0, 1.0Hz, 1H), 7.38 (t, J=7.9Hz, 1H), 5.26-5.17 (m, 1H), 3.82 (dd, J=10.1, 5.5Hz, 1H), 3.49 (s, 3H), 1.79 (dddd, J=9.5, 6.8, 4.0, 2.8Hz, 1H), 1.48-1.38 (m, 1H), 1.22-1.10 (m, 1H), 0.94-0.84 (m, 6H). 13C NMR (101MHz, Chloroform-d) δ δ 171.52, 141.61, 135.76, 130.57, 130.15, 125.78, 122.85, 60.41, 52.27, 38.32, 24.64, 15.36, 11.19. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43.48% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In N,N-dimethyl-formamide at 20℃; for 12h; | 4.5. Synthesis of uracil amino acid amide General procedure: About 3-5 mmol uracil acetic acid and 3-5 mmol 1-hydroxybenzotriazole(HOBt) were added to 100mL two-diameter bottle at room temperature.15-20mL N,N-dimethylformamide (DMF) was dissolved, 3-5 mmol of variousamino acid methyl ester hydrochloride was added, and after dissolution,(1.2-1.8) mL of triethylamine (TEA) was added and stirring was continued.Further, 4-7mmol of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride(EDCI) and 10mL of DMF were added to dissolve, and the reactionwas carried out at room temperature. TLC tracking detection, the developingagent was V (dichloromethane): V (methanol) 7:1. After the reaction wascompleted, it was filtered, and the solvent DMF was evaporated under vacuoto give a viscous yellow oil. The dry method is purified by silica gel column,and the eluent is pure dichloromethane, V (dichloromethane): V (methanol) 40:1, 30:1, 20:1, respectively and the solvent is evaporated under reducedpressure to obtain a solvent. White solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
62.74% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In N,N-dimethyl-formamide at 20℃; for 12h; | 4.6. Synthesis of thymine amino acid amide General procedure: About 3-5 mmol thymidine acetic acid and 3-5 mmol 1-hydroxybenzotriazole(HOBt) were added to 100mL two-diameter bottle at room temperature.(15-20) mL DMF was dissolved, (35) mmol of amino acid methylester hydrochloride was added, and after dissolution, (1.2-1.8) mL of triethylamine(TEA) was added and stirring was continued. Further, (4-7)mmol of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride(EDCI) and 10mL of DMF were added and the mixture was reacted atroom temperature. TLC tracking detection, the developing agent was V(dichloromethane): V (methanol) 8:1. After the reaction was completed,it was filtered, and the solvent DMF was evaporated under vacuo to give aviscous yellow oil. Drying over silica gel column eluting with EtOAc. Intermediate: thymidine glycine amide, white solid 0.50 g, 58.86%. 1HNMR(600 MHz, DMSO-d6) δ 11.27 (1H, s), 8.61 (1H, dd, J5.8, 11.7 Hz),7.43 (1H, s), 4.35 (2H, s), 3.89 (2H, d, J6.42 Hz), 3.64 (3H, s), 1.75 (3H,s). 13C-NMR (151 MHz, DMSO-d6) δ 170.43 (C-10), 167.95 (C-8), 164.82(C-4), 151.34 (C-2), 142.61 (C-6), 108.42 (C-5), 52.14 (C-7), 49.43 (C-20),40.93 (-OCH3), 12.29(5-CH3). ESI-MS m/z: 255.08 [MH] |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
84% | With chloroformic acid ethyl ester; triethylamine In dichloromethane | Dimethyl 2,2'-[2,2'-({2,2'-[(pyridine-3,5-dicarbonyl)bis(azanediyl)]bis(3-methylbutanoyl)}-bis(azanediyl))bis(3-phenylpropanoyl)]bis(azanediyl)}-bis(3-methylpentan-oate) (4). Compound 4 was prepared from dinicotinoyl-bis[dipeptide-carboxylic acid] (2), L-Isolucine methyl ester, ethyl chloroformate, TEA, and dichloromethane according to the known procedure. The raw product was crystallized from methanol/petroleum ether (40-60°C) to give the corresponding pure product 4. Yield 84%, mp 266-268°C. IR spectrum, ν, cm-1: 3444-3412 (NH str), 3082 (C-H, arom), 2978 (C-H, aliph), 1755 (C=O, ester), 1598, 1560, 1494 (C=O amide I, II, and III). 1H NMR spectrum, δ, ppm: 0.82-0.98 m (24H, 8CH3), 1.14-1.28 m (4H, 2CH2), 2.40-2.52 m (2H, 2CH), 2.82-2.96 m (2H, 2CH), 3.48 d (4H, 2CH2), 3.58 s (6H, 2OCH3), 3.88 t (2H, 2CH), 4.30-4.40 m (2H, 2CH), 4.48 d (2H, 2CH), 7.35-7.70 m (10H, 2C6H5), 8.35 s, 9.10 s (3H, C5H3N), 8.74 s, 8.82 s, 8.88 s (6H, 6NH). 13C NMR spectrum, δC, ppm: 11.30, 17.78, 24.10, 29.32, 35.40, 40.24, 51.85, 52.56, 53.42, 56.12, 124.28, 128.54, 129.45, 133.62, 138.72, 142.10, 151.10, 165.80, 168.26, 170.10, 173.65. MS: m/z: 914 [M]+. Found, %: C 64.28; H 7.30; N 10.65. C49H67N7O10. Calculated, %: C 64.38; H 7.39; N 10.73. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With magnesium sulfate; triethylamine In dichloromethane at 0 - 20℃; for 12.5h; Schlenk technique; Inert atmosphere; | Exemplified with the procedure for synthesis of 8a General procedure: L-phenylalanine methyl ester hydrochloride (397 mg, 1.84 mmol), intermediate 7 (300 mg, 0.77mmol) and MgSO4 (222 mg, 1.84 mmol) were placed in a pre-dried 50 mL Schlenk flask undernitrogen. DCM (10 mL) was added and the mixture was cooled to 0 °C. Triethylamine (255 μL,1.84 mmol) was added and the reaction mixture was stirred at 0 °C for 0.5 hour then allowedto warm to room temperature and stir for 12 h. The mixture was then cooled to 0 °C andNaBH(OAc)3 (1.632 g, 7.7 mmol) was added. After stirring at 0 °C for 0.5 hour, the mixturewas allowed to warm to room temperature slowly then stir overnight. The reaction wasquenched with water and the product was extracted with CH2Cl2 for three times. The organiclayers were then combined and dried with Na2SO4. After removal of the solvent, the residuewas purified by column chromatography on silica gel using DCM/MeOH (80:1) as the eluentgiving 8a as yellow solid. |
Yield | Reaction Conditions | Operation in experiment |
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0.12 g | Stage #1: L-isoleucine methyl ester; 3-amino-5-fluoropicolinaldehyde In dichloromethane at 20℃; for 1h; Stage #2: With sodium tris(acetoxy)borohydride In dichloromethane at 0 - 20℃; for 1h; | 39.3 Step 3: Methyl ((3-amino-5-fluoropyridin-2-yl)methyl)-L-isoleucinate. To a solution of 3-amino-5-fluoropicolinaldehyde (0.32 g, 2.3 mmol) in CH2Cl2 (10 mL) at rt was added methyl L-isoleucinate (0.54 g, 2.90 mmol). The reaction mixture was stirred at rt for 1 h and then cooled down to 0 °C followed by the addition of Na(OAc)3BH (0.98 g, 4.6 mmol) in portions. The reaction mixture was warmed up to rt and stirred for 1h. The reaction mixture was cooled down to 0 °C and quenched with saturated NaHCO3 (10 mL). The resulting mixture was stirred at rt for 1 h. The layers were separated, and the aqueous phase was extracted with additional dichloromethane (10 mL). The organic phases were combined, dried over Na2SO4, concentrated, and purified with silica gel chromatography (50% EtOAc/hexane) to give methyl ((3-amino-5-fluoropyridin-2-yl)methyl)-L-isoleucinate as a yellowish oil (0.12 g, 19% yield). LRMS (APCI) m/z 270.2 (M+H). |
0.12 g | Stage #1: L-isoleucine methyl ester; 3-amino-5-fluoropicolinaldehyde In dichloromethane at 20℃; for 1h; Stage #2: With sodium tris(acetoxy)borohydride In dichloromethane at 0 - 20℃; for 1h; | 39.3 Step 3: Methyl ((3-amino-5-fluoropyridin-2-yl)methyl)-L-isoleucinate. To a solution of 3-amino-5-fluoropicolinaldehyde (0.32 g, 2.3 mmol) in CH2Cl2 (10 mL) at rt was added methyl L-isoleucinate (0.54 g, 2.90 mmol). The reaction mixture was stirred at rt for 1 h and then cooled down to 0 °C followed by the addition of Na(OAc)3BH (0.98 g, 4.6 mmol) in portions. The reaction mixture was warmed up to rt and stirred for 1h. The reaction mixture was cooled down to 0 °C and quenched with saturated NaHCO3 (10 mL). The resulting mixture was stirred at rt for 1 h. The layers were separated, and the aqueous phase was extracted with additional dichloromethane (10 mL). The organic phases were combined, dried over Na2SO4, concentrated, and purified with silica gel chromatography (50% EtOAc/hexane) to give methyl ((3-amino-5-fluoropyridin-2-yl)methyl)-L-isoleucinate as a yellowish oil (0.12 g, 19% yield). LRMS (APCI) m/z 270.2 (M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
50% | Stage #1: L-isoleucine methyl ester; 2-amino-4,6-difluorobenzaldehyde In dichloromethane at 20℃; for 1h; Stage #2: With sodium tris(acetoxy)borohydride In dichloromethane for 1h; Stage #3: With sodium cyanotrihydridoborate In methanol; dichloromethane at 20℃; for 1h; | 56 Methyl (2-amino-4,6-difluorobenzyl)-L-isoleucinate. To a solution of 2-amino-4,6- difluorobenzaldehyde (0.55 g, 3.5 mmol) in CH2Cl2 (10 mL) at rt was added L-isoleucine methyl ester (0.95 g, 5.3 mmol). The mixture was stirred for 1 h, followed by the addition of Na(OAc)3BH (1.48 g, 7.0 mmol). The reaction mixture was stirred for 1 h. Methanol and Na(CN)BH3 (0.44 g, 7.0 mmol) were then added, and the reaction was stirred at rt for 1 h. The reaction mixture was cooled down to 0 °C, quenched with saturated NaHCO3 (10 mL), warm to rt, and stirred for 1 h. The layers were separated, and the aqueous phase was extracted with additional CH2Cl2 (10 mL). The organic phases were combined, dried over Na2SO4, concentrated, and purified with silica gel chromatography (0-25% EtOAc/hexane) to give methyl (2-amino-4,6-difluorobenzyl)-L-isoleucinate as a yellowish oil (0.50 g, 50% yield). LRMS (APCI) m/z 287.2 (M+H). |
50% | Stage #1: L-isoleucine methyl ester; 2-amino-4,6-difluorobenzaldehyde In dichloromethane at 20℃; for 1h; Stage #2: With sodium tris(acetoxy)borohydride In dichloromethane for 1h; Stage #3: With sodium cyanotrihydridoborate In methanol; dichloromethane at 20℃; for 1h; | 56 Methyl (2-amino-4,6-difluorobenzyl)-L-isoleucinate. To a solution of 2-amino-4,6- difluorobenzaldehyde (0.55 g, 3.5 mmol) in CH2Cl2 (10 mL) at rt was added L-isoleucine methyl ester (0.95 g, 5.3 mmol). The mixture was stirred for 1 h, followed by the addition of Na(OAc)3BH (1.48 g, 7.0 mmol). The reaction mixture was stirred for 1 h. Methanol and Na(CN)BH3 (0.44 g, 7.0 mmol) were then added, and the reaction was stirred at rt for 1 h. The reaction mixture was cooled down to 0 °C, quenched with saturated NaHCO3 (10 mL), warm to rt, and stirred for 1 h. The layers were separated, and the aqueous phase was extracted with additional CH2Cl2 (10 mL). The organic phases were combined, dried over Na2SO4, concentrated, and purified with silica gel chromatography (0-25% EtOAc/hexane) to give methyl (2-amino-4,6-difluorobenzyl)-L-isoleucinate as a yellowish oil (0.50 g, 50% yield). LRMS (APCI) m/z 287.2 (M+H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With benzotriazol-1-ol; dicyclohexyl-carbodiimide In dichloromethane; N,N-dimethyl-formamide at 20℃; | 4.4.1. Indanoyl-Amino Acid Conjugates and Indanoyl Amides General procedure: 1-oxo-indane-4-carboxylic acid (2, 1.0 eq) or 6-bromo-1-oxo-indane-4-carboxylic acid (3,1.0 eq), HOBt (1.5 eq), DMF (1.0 eq), and the methyl esters of the amino acids (1.0 eq) or thealkyl amines [3-(dimethylamino)-1-propylamine or 3-(diethylamino)-1-propylamine] weredissolved in DCM at room temperature and prepared according to the process describedin [13]. The resulting products were subjected to purification by column chromatographyusing silica gel (mobile phase: mixtures n-hex:EtOAc from 7:3 to 2:8 v/v for indanoyl-aminoacid conjugates, and DCM:methanol, 9:1 to 1:1 v/v for indanoyl amides). Then, a secondstage of purification was necessary using Sephadex LH-20 (mixture n-hex:DCM:methanol,2:1:1, v/v). Derivatives (4), (5), (6), (7), and (8) were obtained as solids. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
59% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In dichloromethane; N,N-dimethyl-formamide at 20℃; | 4.4.1. Indanoyl-Amino Acid Conjugates and Indanoyl Amides General procedure: 1-oxo-indane-4-carboxylic acid (2, 1.0 eq) or 6-bromo-1-oxo-indane-4-carboxylic acid (3,1.0 eq), HOBt (1.5 eq), DMF (1.0 eq), and the methyl esters of the amino acids (1.0 eq) or thealkyl amines [3-(dimethylamino)-1-propylamine or 3-(diethylamino)-1-propylamine] weredissolved in DCM at room temperature and prepared according to the process describedin [13]. The resulting products were subjected to purification by column chromatographyusing silica gel (mobile phase: mixtures n-hex:EtOAc from 7:3 to 2:8 v/v for indanoyl-aminoacid conjugates, and DCM:methanol, 9:1 to 1:1 v/v for indanoyl amides). Then, a secondstage of purification was necessary using Sephadex LH-20 (mixture n-hex:DCM:methanol,2:1:1, v/v). Derivatives (4), (5), (6), (7), and (8) were obtained as solids. |
Tags: 2577-46-0 synthesis path| 2577-46-0 SDS| 2577-46-0 COA| 2577-46-0 purity| 2577-46-0 application| 2577-46-0 NMR| 2577-46-0 COA| 2577-46-0 structure
[ 1217784-81-0 ]
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[ 768356-83-8 ]
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[ 1251904-23-0 ]
(R)-Methyl 2-amino-2-cyclobutylacetate
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