Structure of 258331-10-1
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CAS No. : | 258331-10-1 |
Formula : | C12H16O3 |
M.W : | 208.25 |
SMILES Code : | O=C(OC(C)(C)C)CC1=CC=CC=C1O |
MDL No. : | MFCD25019077 |
InChI Key : | WQKQVLJLRPWESF-UHFFFAOYSA-N |
Pubchem ID : | 15525521 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 15 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.42 |
Num. rotatable bonds | 4 |
Num. H-bond acceptors | 3.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 58.79 |
TPSA ? Topological Polar Surface Area: Calculated from |
46.53 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.26 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.16 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.28 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.25 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.33 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.26 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.52 |
Solubility | 0.623 mg/ml ; 0.00299 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.77 |
Solubility | 0.354 mg/ml ; 0.0017 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.13 |
Solubility | 0.153 mg/ml ; 0.000736 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.04 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.92 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
30% | With triethylamine; In dichloromethane; at 20℃; for 16h; | Example 81 {2-[((2R,5S)-5-[(2S)-2-cyanopyrrolidin-1-yl]carbonyl}pyrrolidin-2- yl) methoxy]phenyl}acetic acid Example 81A (2-Hydroxy-phenyl) -acetic acid ter-butyl ester Di-tert-butyl dicarbonate (218 mg, 0.1 mmol) was added to a solution of (2- hydroxybenzyl) triphenylphosphonium bromide (300 mg, 0.67 mmol) and triethylamine (0.32 mL, 0.3 mmol) in dry dichloromethane at room temperature under argon atmosphere. The mixture was stirred for 16 h and then poured into aqueous pH 7 buffer solution. Extraction with ethyl acetate followed by chromatography on silica gel (hexane/ethyl acetate = 4/1) gave desired product (66 mg, 30%). MS (DCI) m/z 330 (M+H) +. |
30% | With triethylamine; In dichloromethane; at 20℃; for 16h; | EXAMPLE 81A (2-Hydroxy-phenyl)-acetic acid tert-butyl ester Di-tert-butyl dicarbonate (218 mg, 0.1 mmol) was added to a solution of (2-hydroxybenzyl)triphenylphosphonium bromide (300 mg, 0.67 mmol) and triethylamine (0.32 mL, 0.3 mmol) in dry dichloromethane at room temperature under argon atmosphere. The mixture was stirred for 16 h and then poured into aqueous pH 7 buffer solution. Extraction with ethyl acetate followed by chromatography on silica gel (hexane/ethyl acetate=4/1) gave desired product (66 mg, 30%). MS (DCI) m/z 330 (M+H)+. |
With triethylamine; In dichloromethane; at 20 - 40℃; for 96h;Inert atmosphere; | To a suspension of (2-hydroxybenzyl)triphenylphosphonium bromide (CAS 70340-04- 4) (50 g, 1 1 1 mmol) in DCM (500 mL) was added Et3N (46.3 ml_, 334 mmol) at room temperature. c//-ferf-Butyl dicarbonate (40.9 mL, 178 mmol) was added and the reaction was stirred at 40 C for 4 days. The reaction was cooled to room temperature and diluted with DCM and water and the DCM layer was removed, dried and concentrated and absorbed onto silica to purify via FCC (EtOAc-heptane 0-20%) to obtain the title compound. 1H NMR (400 MHz, DMSO-d6) delta ppm 9.39 (s, 1 H) 6.98 - 7.1 1 (m, 2 H) 6.66 - 6.83 (m, 2 H) 3.43 (s, 2 H) 1.39 (s, 9 H). |
With triethylamine; In dichloromethane; at 40℃; for 96h; | Intermediate 2. tert-Butyl 2-(2-hydroxyphenyl)acetate To a suspension of (2-hydroxybenzyl)triphenylphosphonium bromide (CAS 70340-04- 4) (50 g, 1 1 1 mmol) in DCM (500 mL) was added Et3N (46.3 mL, 334 mmol) at room temperature. cf/'-fe/ -Butyl dicarbonate (40.9 mL, 178 mmol) was added and the reaction mixture was stirred at 40 C for 4 days. The reaction mixture was cooled to room temperature and partitioned between DCM and water. The aqueous layer was extracted with DCM. The combined organics were dried and concentrated. The residue was absorbed onto silica gel and purified by silica gel chromatography (0-20% EtOAc/heptane) to provide the title compound. 1H NMR (400 MHz, DMSO-c/6) delta ppm 9.39 (s, 1 H) 6.98 - 7.1 1 (m, 2 H) 6.66 - 6.83 (m, 2 H) 3.43 (s, 2 H) 1 .39 (s, 9 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With potassium carbonate; In N,N-dimethyl-formamide; at 20℃;Inert atmosphere; | Terf-butyl 2-(2-hydroxyphenyl)acetate (Intermediate 21 ) (0.84 g, 4.0 mmol) was dissolved in DMF (20.2 mL) and K2C03 (0.641 g, 4.64 mmol) was added followed by 1 ,3- dibromo-5-(bromomethyl)benzene (CAS 56908-88-4) (1 .46 g, 4.44 mmol). After stirring overnight at room temperature the reaction was diluted with ethyl acetate and water. The organic phase was washed with water, dried with MgS04, filtered and concentrated. The reaction was purified by flash chromatography (0-30% EtOAc: Heptanes) to provide the title compound. 1 H NMR (400 MHz, DMSO-c/6) delta ppm 7.79 (t, J=1 .77 Hz, 1 H) 7.66 (d, J=1 .77 Hz, 2 H) 7.16 - 7.29 (m, 2 H) 6.98 (d, J=7.58 Hz, 1 H) 6.92 (td, J=7.42, 0.95 Hz, 1 H) 5.13 (s, 2 H) 3.55 (s, 2 H) 1 .34 (s, 9 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 20℃;Inert atmosphere; Cooling with ice; | A solution of (5-bromo-1 ,3-phenylene)dimethanol (CAS 51760-22-6) (32.5 g, 150 mmol) and ferf-butyl 2-(2-hydroxyphenyl)acetate (Intermediate 21 ) (15.6 g, 74.9 mmol) and PPh3 (39.3 g, 150 mmol) in THF (250 mL) was cooled to 0 C in an ice/water bath. DIAD (29.1 mL, 150 mmol) was added dropwise and the resulting yellow solution was allowed to warm to room temperature. After overnight the reaction was quenched with water, extracted with EtOAc, dried with MgS04, filtered and concentrated. The crude product was purified by flash chromatography (0-60% EtOAc: Heptanes) to provide the title compound. 1H NMR (600 MHz, DMSO-c/6) delta ppm 7.50 (s, 1 H) 7.46 (s, 1 H) 7.36 (s, 1 H) 7.16 - 7.27 (m, 2 H) 7.01 (d, J=8.07 Hz, 1 H) 6.91 (td, J=7.40, 0.87 Hz, 1 H) 5.34 (t, J=5.73 Hz, 1 H) 5.1 1 (s, 2 H) 4.50 (d, J=5.69 Hz, 2 H) 3.55 (s, 2 H) 1.34 (s, 9 H). | |
With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; | Intermediate 13-A. ferf-Butyl 2-(2-((3-bromo-5-(hydroxymethyl)benzyl)oxy)phenyl)acetate A solution of (5-bromo-1 ,3-phenylene)dimethanol (CAS 51760-22-6) (32.5 g, 150 mmol) and fe/f-butyl 2-(2-hydroxyphenyl)acetate (Intermediate 2) (15.6 g, 74.9 mmol) and PPh3 (39.3 g, 150 mmol) in THF (250 mL) was cooled to 0 C in an ice/water bath. DIAD (29.1 ml_, 150 mmol) was added dropwise and the resulting yellow solution was allowed to warm to room temperature and stirred overnight. Excess base was quenched with water, the resulting mixture was extracted with EtOAc, dried with MgS04, filtered and concentrated. The residue was purified by silica gel chromatography (0-60% EtOAc/heptane) to provide the title compound. 1H NMR (600 MHz, DMSO-c/6) delta ppm 7.50 (s, 1 H) 7.46 (s, 1 H) 7.36 (s, 1 H) 7.16 - 7.27 (m, 2 H) 7.01 (d, J=8.07 Hz, 1 H) 6.91 (td, J=7.40, 0.87 Hz, 1 H) 5.34 (t, J=5.73 Hz, 1 H) 5.1 1 (s, 2 H) 4.50 (d, J=5.69 Hz, 2 H) 3.55 (s, 2 H) 1 .34 (s, 9 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 20℃;Inert atmosphere; Cooling with ice; | A solution of (3-bromo-5-(trifluoromethyl)phenyl)methanol (CAS 172023-97-1 ) (0.525 g, 2.06 mmol) and ferf-butyl 2-(2-hydroxyphenyl)acetate (Intermediate 21 ) (0.557 g, 2.67 mmol) and PPh3 (0.702 g, 2.67 mmol) in THF (20.6 mL) was cooled to 0 C in an ice/water bath under nitrogen. DIAD (0.520 mL, 2.67 mmol) was added dropwise. The reaction was allowed to warm to room temperature and then stirred overnight. The reaction was quenched with water, extracted with EtOAc, washed with brine, dried with MgS04, filtered and concentrated. This was purified by flash chromatography (0-40% EtOAc: Heptanes) to provide the title compound. 1H NMR (400 MHz, DMSO-c/6) delta ppm 7.97 (s, 1 H) 7.93 (s, 1 H) 7.84 (s, 1 H) 7.16 - 7.31 (m, 2 H) 7.01 (d, J=7.58 Hz, 1 H) 6.88 - 6.97 (m, 1 H) 5.23 (s, 2 H) 3.56 (s, 2 H) 1.31 (s, 9 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; for 16h;Inert atmosphere; | Example 16. 2-(2-((3'-(2-amino-2-oxoethyl)-5'-fluoro-[1 ,1 '-biphenyl]-3- yl)methoxy)phenyl)acetic acid To a solution of 2-(5-fluoro-3'-(hydroxymethyl)-[1 ,1 '-biphenyl]-3-yl)acetamide (Intermediate 42-C) (50 mg, 0.193 mmol), fe/f-butyl 2-(2-hydroxyphenyl) acetate (Intermediate 2) (48.2 mg, 0.231 mmol) and PPh3 (101 mg, 0.386 mmol) in THF (4 ml) at 0 C in an ice/water bath under nitrogen was added DIAD (0.075 ml, 0.386 mmol) dropwise. The reaction was stirred at room temperature for 16 hours. The mixture was dilutied in EtOAc and washed with water. The water layer was extracted with EtOAc twice. The organic layers were combined and concentrated to provide crude fe/f-butyl 2-(2-((3'-(2-amino-2-oxoethyl)-5'-fluoro-[1 ,1 '-biphenyl]-3- yl)methoxy)phenyl)acetate. This was dissolved in DCM (1 mL) and TFA (1 mL) was added. The resulting mixture was stirred at room temperature for 30 min, then concentrated. The residue was purified by HPLC (Method A) to provide the title product. 1H NMR (400 MHz, Methanol-d4) delta 7.77 (qd, J = 1 .5, 0.9 Hz, 1 H), 7.57 (tdd, J = 4.9, 2.9, 1 .5 Hz, 1 H), 7.48 - 7.44 (m, 3H), 7.30 (ddd, J = 10.1 , 2.5, 1 .6 Hz, 1 H), 7.27 - 7.20 (m, 2H), 7.07 - 7.02 (m, 2H), 6.92 (td, J = 7.4, 1 .1 Hz, 1 H), 5.19 (s, 2H), 3.68 (s, 2H), 3.60 (s, 2H). HRMS calcd. for C23H20FNO4 (M+H) 394.1455, found 394.1455. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 0 - 20℃; for 16h;Inert atmosphere; | Intermediate 3-A. tert-Butyl 2-(2-((3-bromo-5-chlorobenzyl)oxy)phenyl)acetate A solution of 3-bromo-5-chloro-benzyl alcohol (CAS 917562-09-5) (2.24 g, 10.1 1 mmol) and fe/ -butyl 2-(2-hydroxyphenyl) acetate (Intermediate 2, 2.74 g, 13.15 mmol) and PPh3 (3.45 g, 13.15 mmol) inTHF (50 mL) was cooled to 0 C in an ice/water bath under nitrogen. DIAD (2.56 ml, 13.15 mmol) was added dropwise. The resulting yellow solution was allowed to warm to room temperature and then stirred for 16 hours. Excess base was quenched with water and the resulting mixture was extracted with EtOAc (2X), washed with brine, dried with MgS04, filtered and concentrated. The residue was purified by silica gel chromatography (0-40% EtOAc/heptane) to provide the title compound. 1H NMR (400 MHz, CHLOROFORM-cf2) delta ppm 7.44 - 7.53 (m, 2 H) 7.38 (t, J=1 .64 Hz, 1 H) 7.17 - 7.24 (m, 2 H) 6.96 (d, J=1 .01 Hz, 1 H) 6.86 (d, J=8.21 Hz, 1 H) 5.02 (s, 2 H) 3.60 (s, 2 H) 1 .42 (s, 9 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
35% | With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 80℃;Sealed tube; Inert atmosphere; | tert-Butyl 4-bromo-6-(hydroxymethyl)- 1H-indazole- 1 -carboxylate (0.270 g, 0.83 mmol) and<strong>[258331-10-1]tert-butyl 2-(2-hydroxyphenyl)acetate</strong> (0.206 g, 0.99 mmol) were dissolved in THF (16.5mL) under a nitrogen atmosphere. DIAD (0.25 mL, 1.24 mmol) and then PPh3 (0.442 g, 1.65mmol) were added. The vial was sealed and heated to 80C until complete consumption ofstarting material. After cooling to room temperature, water was added to the reaction mixture.The aqueous layer was extracted with isopropyl acetate. The combined organic layers weredried with sodium sulfate, concentrated, and the crude residue was purified by flash columnchromatography (silica, 0-100% iPrOAc/heptane) to give tert-butyl 4-bromo-6-((2-(2-(tert-butoxy)-2-oxoethyl)phenoxy)methyl)- 1H-indazole- 1 -carboxylate (0.150 g, 0.29 mmol, 35%yield). ?H NMR (400 MHz, Chloroform-d) oe 8.23 - 8.19 (m, 1H), 8.17 (d, J 0.8 Hz, 1H),7.62 (dd, J 1.2, 0.6 Hz, 1H), 7.22 (d, J 7.5 Hz, 2H), 6.96 (td, J= 7.5, 1.1 Hz, 1H), 6.93 - 6.87 (m, 1H), 5.20 (s, 2H), 3.62 (s, 2H), 1.71 (s, 9H), 1.39 (s, 9H). LCMS: mlz = +539 (M+Na). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.5 g | With caesium carbonate; In N,N-dimethyl-formamide; at 4℃; for 4h; | tert-Butyl 2-(2-hydroxyphenyl)acetate (0.80 g, 3.70 mmol), cesium carbonate (3.20 g, 10.0 mmol) and the crude residue were dissolved in N,N-dimethylformamide (33 mL) and heated at 40C for 4 h. After cooling to rt, the reaction was diluted with isopropyl acetate and water. The aqueous layer was extracted with isopropyl acetate (3 x 100 mL). The combined organic layers were dried with sodium sulfate, concentrated and the crude residue was purified byflash column chromatography (silica, 0% to 100% isopropyl acetate - heptane) to give tertbutyl 2- [2- [(4-iodo- 1 -pyrimidin-2-yl-indol-6-yl)methoxy]phenyl] acetate (0.50 g, 0.92 mmol,28% Yield over 4 steps). ?H NMR (400 MHz, Chloroform-d) oe 8.91 (s, 1H), 8.73 (d, J 4.8Hz, 2H), 8.40 - 8.32 (m, 1H), 7.74 (d, J= 1.3 Hz, 1H), 7.25 - 7.17 (m, 2H), 7.10 (t, J 4.8Hz, 1H), 7.02 -6.89 (m, 2H), 6.65 (dd, J= 3.6, 0.8 Hz, 1H), 5.19 (s, 2H), 3.64 (s, 2H), 1.36(s, 9H). LCMS mlz= + 564.0 (M+Naj. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
41.8% | With caesium carbonate; In N,N-dimethyl-formamide; at 40℃; for 4h; | tert-Butyl 2-(2-hydroxyphenyl)acetate (0.306 g 1.47 mmol), cesium carbonate (0.480 g, 1.47 mmol) and the crude residue (0.490 mmol) were dissolved in N,N-dimethylformamide (4.9 mL) and heated at 40 C for 4 h. After cooling to room temperature, the reaction was diluted with isopropyl acetate and water. The aqueous layer was extracted with isopropyl acetate (3x 30 mL). The combined organic layers were dried with sodium sulfate, concentrated, and the crude residue was purified by flash column chromatography (silica, 0% to 100% isopropyl acetate - heptane) to give tert-butyl 2-[2-[ [2-(tert-butoxycarbonylamino)-7- [3- [(tert-butoxycarbonylamino)methyl]phenyl] -1,3 -benzoxazol-5 -yl]methoxy]phenyl] acetate (0.135 g, 0.205 mmol, 41.8% Yield). LCMS: mlz = + 660 (M+Hj |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
27% | With di-isopropyl azodicarboxylate; triphenylphosphine; In tetrahydrofuran; at 80℃; for 2h;Inert atmosphere; | Twelve reactions were carried out in parallel.To a solution of tert-butyl (3 -(5 -(hydroxymethyl)benzo[d]oxazol-7-yl)benzyl)carbamate (20 mg, 56.4 imol) and <strong>[258331-10-1]tert-butyl 2-(2-hydroxyphenyl)acetate</strong> (14.1 mg, 67.7 imol) in THF (1 mL) was added DIAD (17.1 mg, 84.6 imol, 16.5 iL) followed by PPh3 (29.6 mg, 0.113 mmol) under N2. The mixture was stirred at 80C for 2 hours. After cooling to room temperature, the 12 reactions were combined, and the reaction mixture was quenched withwater (8 mL). The aqueous layer was extracted with EtOAc (3 x 4 mL). The combined organic layers were concentrated under reduced pressure and the crude residue was purified by prep-TLC (petroleum ether/EtOAc = 1:1) to give tert-butyl 2-(2-((7-(3-(((tert- butoxycarbonyl)amino)methyl)phenyl)benzo[d]oxazol-5 -yl)methoxy)phenyl)acetate (0.100 g, 27% Yield) as a yellow solid. ?H NMR (400 MHz, MeOD) 5 8.54 (s, 1H), 7.79-7.85 (m,4H), 7.46-7.48 (t, 1H), 7.35 (d, J= 8 Hz, 1H), 7.25 (t, 1H), 7.19 (d, J 7.2 Hz, 1H), 7.08 (d, J 8.4 Hz, 1H), 6.92-6.94 (m, 1H), 5.28 (s, 2H), 4.34 (br s, 2H), 3.61 (s, 2H), 1.45 (s, 9H), 1.28 (s, 9H). LCMS: mlz = + 545.1 (M+Hj |