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[ CAS No. 39890-95-4 ] {[proInfo.proName]}

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Chemical Structure| 39890-95-4
Chemical Structure| 39890-95-4
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Product Details of [ 39890-95-4 ]

CAS No. :39890-95-4 MDL No. :MFCD00042226
Formula : C6H3ClF3N Boiling Point : -
Linear Structure Formula :- InChI Key :-
M.W : 181.54 Pubchem ID :-
Synonyms :

Calculated chemistry of [ 39890-95-4 ]

Physicochemical Properties

Num. heavy atoms : 11
Num. arom. heavy atoms : 6
Fraction Csp3 : 0.17
Num. rotatable bonds : 1
Num. H-bond acceptors : 4.0
Num. H-bond donors : 0.0
Molar Refractivity : 34.25
TPSA : 12.89 Ų

Pharmacokinetics

GI absorption : High
BBB permeant : Yes
P-gp substrate : No
CYP1A2 inhibitor : Yes
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -5.51 cm/s

Lipophilicity

Log Po/w (iLOGP) : 1.83
Log Po/w (XLOGP3) : 2.67
Log Po/w (WLOGP) : 3.91
Log Po/w (MLOGP) : 2.18
Log Po/w (SILICOS-IT) : 3.01
Consensus Log Po/w : 2.72

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 2.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -2.99
Solubility : 0.188 mg/ml ; 0.00103 mol/l
Class : Soluble
Log S (Ali) : -2.59
Solubility : 0.464 mg/ml ; 0.00256 mol/l
Class : Soluble
Log S (SILICOS-IT) : -3.53
Solubility : 0.0541 mg/ml ; 0.000298 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 1.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.51

Safety of [ 39890-95-4 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P301+P312-P302+P352-P304+P340-P305+P351+P338 UN#:N/A
Hazard Statements:H302-H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 39890-95-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 39890-95-4 ]
  • Downstream synthetic route of [ 39890-95-4 ]

[ 39890-95-4 ] Synthesis Path-Upstream   1~24

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Reference: [1] Journal of Medicinal Chemistry, 1993, vol. 36, # 6, p. 733 - 746
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  • [ 368-48-9 ]
Reference: [1] Tetrahedron, 1993, vol. 49, # 36, p. 7883 - 7890
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Reference: [1] Journal of Medicinal Chemistry, 1998, vol. 41, # 1, p. 96 - 101
[2] Patent: US5464781, 1995, A,
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YieldReaction ConditionsOperation in experiment
80.8% With potassium hydroxide In <i>tert</i>-butyl alcohol at 70℃; for 8 h; (3), 1500 g of t-butanol, 140 g of potassium hydroxide and 2-chloro-6-trifluoromethylpyridine prepared in step (2) were added to a 3 L reaction flask, and the temperature was raised to 70 ° C,Insulation reaction 8 hours,After completion of the reaction, tert-butanol was removed under reduced pressure, 550 g of ethyl acetate and 550 g of water were added and stirred,The organic layer was washed with 370 g of saturated brine, dried over 100 g of anhydrous sodium sulfate, and the ethyl acetate was removed by steaming To give crude 172.4 g;(4), the crude product prepared in step (3) was added to 150 g of ethyl acetate, heated to 70 ° C, stirred and dissolved, and 1200 g of petroleum ether was added dropwise,After the addition of petroleum ether, the mixture was cooled to 2 ° C, solid crystals were precipitated, and the solid was filtered. The solid was washed with 50 g of petroleum ether and dried at 70 ° C,To obtain 131.2 g of 2-hydroxy-6-trifluoromethylpyridine as a pale yellow solid powder in a yield of 80.8percent.
Reference: [1] Patent: CN106866512, 2017, A, . Location in patent: Paragraph 0014
[2] Patent: US5973159, 1999, A,
[3] Patent: CN107759513, 2018, A, . Location in patent: Paragraph 0017
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YieldReaction ConditionsOperation in experiment
97% With hydrogenchloride In water EXAMPLE 8
This Example illustrates the preparation of 2-hydroxy-6-trifluoromethylpyridine by reacting a 95:5 mixture of 2-fluoro-6-trifluoromethylpyridine and 2-chloro-6-trifluoromethylpyridine with aqueous potassium hydroxide at 115-130° C. Potassium hydroxide flake (95percent, 25.9 g, 2.22 mole equivalents) and water (24.6 g, 6.84 mole equivalents) were charged to a 250 ml round bottomed flask fitted with a condenser, agitator and (contents thermometer.
The contents were stirred to give a solution and heated to 130° C. (reflux).
A mixture of 2-fluoro-6-trifluoromethylpyridine (99.2percent, 31.6 g, 0.95 mole equivalents) and 2-chloro-6-trifluoromethylpyridine (100percent, 1.8 g, 0.05 mole equivalents) was add d dropwise over 1 hour maintaining a gentle reflux (115-120° C.).
When the addition was complete the reaction mixture was held for 4 hours at 115° C. (reflux).
The reaction mixture was cooled to 50° C. and water (79 g) added.
Hydrochloric acid (approximately 27.4 g, 36percent strength) was then added dropwise over 30 minutes maintaining a temperature of 50° C. to give a pH of 5.
The resulting slurry was stirred for a further 10 minutes at 50° C. and then cooled to 0-5° C. and the pH readjusted to 5.
The slurry was held for a further 30 minutes at 0-5° C.
The product was filtered and displacement washed with water (37 g).
The title product was then dried under vacuum at 40° C.:
isolated dry weight 31.7 g, yield 97percent (assuming a product strength of 100percent).
Reference: [1] Patent: US6143899, 2000, A,
[2] Patent: US6143899, 2000, A,
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  • [ 7664-93-9 ]
  • [ 39890-95-4 ]
  • [ 34486-06-1 ]
Reference: [1] Patent: US5973159, 1999, A,
  • 7
  • [ 1929-82-4 ]
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YieldReaction ConditionsOperation in experiment
80% at 330℃; 2-chloro-6-trichloromethyl pyridine (700 g, 3.03 moles, feed rate 1.24 g/min) and anhydrous hydrogen fluoride (936 g, 46.8 moles, feed rate 1.66 g/min) in the absence of inert gas were fed in to a tubular reactor packed with pre activated chromia- alumina catalyst (210 g) at 330°C. Reactor outlet material was collected in ice-cooled water and it was extracted with dichloromethane. Dichloromethane layer was washed with 10percent potassium hydroxide solution and the organic layer was separated out and it was concentrated to get 490.0 g of crude 2-chloro-6-trifluoromethypyridine. The purity of crude product was 95.03 percent by GC analysis. Reaction yield on the basis of crude product obtained is 89 percent. The crude product was purified by fractional distillation to obtain 2-chloro-6-trifluoromethlypyridine with the Purity (percent): 98.0 Yield (percent): 80.0
Reference: [1] Patent: WO2016/178248, 2016, A1, . Location in patent: Page/Page column 5
  • 8
  • [ 34486-24-3 ]
  • [ 39890-95-4 ]
YieldReaction ConditionsOperation in experiment
186.3 g
Stage #1: With hydrogenchloride In water at 70℃; for 1 h;
Stage #2: at -2 - 2℃;
Stage #3: With hydrogenchloride; copper(l) chloride In water at 65℃; for 2 h;
(1), 2000 g of reaction flask A was charged with 700 g of concentrated hydrochloric acid at a concentration of 36percent by weight and 162.1 g2-amino-6-trifluoromethylpyridine was heated to 70 ° C, stirred for 1 hour, after the completion of the reaction to -2 to 2 ° C, 177.5 g of a sodium nitrite solution having a concentration of 40percentDropping the diazonium salt solution;(2), 500 ml of a hydrochloric acid solution having a concentration of 18percent by weight and 129.4 g of cuprous chloride were added to another reaction flask B, and the mixture was heated to 65C. The resulting diazonium salt solution was added dropwise, Reaction for 2 hours,After the completion of the reaction, the pH of the reaction solution was adjusted to 10 with a sodium hydroxide solution having a concentration of 46percent by weight. Then, 550 g of ethyl acetate was added thereto, followed by stirring. The organic layer was extracted and extracted twice,The organic layer was combined and the organic layer was distilled off to remove ethyl acetate to give a pale yellow liquid. The pale yellow liquid was cooled to room temperature to give 186.3 g of solid 2-chloro-6-trifluoromethylpyridine.
Reference: [1] Patent: CN106866512, 2017, A, . Location in patent: Paragraph 0014
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YieldReaction ConditionsOperation in experiment
90.96 %Chromat. at 160 - 180℃; for 22 h; A 300 ml high pressure reactor equipped with overhead condenser with controlled valve, mechanical stirrer and pressure gauge was charged with 2-chloro-6-(trichloromethyl)pyridine (231 gm) and ferric chloride (11 gm). The mixture was heated and anhydrous hydrogen fluoride was added into the reaction mixture under agitation. The temperatures of the mixture was maintained at 170±10 °C and at a pressure of 20±5 kg/cm for 18 hours with continuous feeding of anhydrous hydrogen fluoride at the rate of 20 gm/hr. Reaction mixture was maintained further for 4 hours. The excess HF and hydrochloric acid gas generated were vented, scrubbed and separated as per conventional method and recycled. The completion of reaction was monitored by gas chromatography. After the completion of reaction, the reactor was depressurized to atmospheric pressure and flushed with nitrogen. Reaction product was distilled, diluted with water, neutralized with 5percent aqueous solution of sodium carbonate, layer separated and analysed. The results obtained as per gas chromatography were: 2-fluoro-6- (trifluoromethyl)pyridine: 90.96 percent; 2-chloro-6-(trifluoromethyl)pyridine: 7.67 percent; 2-chloro-6- (trichloromethyl)pyridine: 0.001 percent. The obtained product was distilled to obtain 2-fluoro-6- (trifluoromethyl)pyridine with 85percent yield and 99.97percent GC purity. The distillation residue containing partially fluorinated chlorofluoropyridine compounds was recycled back. The product was confirmed by mass spectroscopy and 1HNMR.
Reference: [1] Patent: WO2015/151116, 2015, A2, . Location in patent: Page/Page column 9; 10
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YieldReaction ConditionsOperation in experiment
51.87 %Chromat. at 180 - 200℃; A 300 ml high pressure reactor equipped with overhead condenser with controlled valve, pressure gauge and mechanical stirrer was charged with 2-chloro-6-(trichloromethyl)pyridine (231 gm). The solution was heated and anhydrous hydrogen fluoride (260 gm) was added into the reaction mixture under agitation in approx 20 hours at 190±10 °C and 20-30 kg/cm pressure. Reaction mixture was maintained further for 8 hours. The excess HF and hydrochloric acid gas generated were vented, scrubbed and separated as per conventional method and recycled. The completion of reaction was monitored by gas chromatography. After the completion of reaction, the reactor was depressurized to atmospheric pressure and flushed with nitrogen. Reaction product was distilled, diluted with water, neutralized with 5percent aqueous solution of sodium carbonate and layer separated. The obtained product layer was analyzed by gas chromatography and the results obtained were: 2-fluoro-6- (trifluoromethyl)pyridine:- 51.87percent; 2-chloro-6-(trifluoromethyl)pyridine: 38.66percent; 2-chloro-6- (difluorochloromethyl)pyridine: 8.22percent. The obtained product was distilled to get 2-fluoro-6- (trifluoromethyl)pyridine with 99.97percent GC purity. The product was confirmed by mass spectroscopy and 1H NMR. The distillation residue containing partially fluorinated chlorofluoropyridine compound was recycled back.
40.28 %Chromat. at 150 - 175℃; for 12 h; A 300 ml high pressure reactor equipped with overhead condenser with controlled valve, mechanical stirrer and pressure gauge was charged with 2-chloro-6-(trichloromethyl)pyridine (1 16 gm). The solution was heated and anhydrous hydrogen fluoride (55 gm) was added into the reaction mixture in one lot under agitation. The reaction was maintained at a temperature 150-175 °C under autogenously developed pressure for 12 hours. After the completion of reaction, the reactor was depressurized to atmospheric pressure and flushed with nitrogen. The reaction product was diluted in ice water, neutralized with soda ash aqueous solution, followed by steam distillation and analysed. The results obtained as per gas chromatography were: 2-fluoro-6-(trifluoromethyl)pyridine: 40.28percent; 2-chloro-6-(trifluoromethylpyriidne: 48.49percent; 2-chloro-6-(difluorochloromethyl)pyrdine: 10.22percent; 2-chloro-6- (0063) (trichloromethyl)pyriditte: 0.01 1percent. The product was confirmed by mass spectroscopy and 1H NMR.
Reference: [1] Patent: WO2015/151116, 2015, A2, . Location in patent: Page/Page column 10; 11
[2] Patent: WO2015/151116, 2015, A2, . Location in patent: Page/Page column 12
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Reference: [1] European Journal of Organic Chemistry, 2002, # 2, p. 327 - 330
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Reference: [1] European Journal of Organic Chemistry, 2002, # 2, p. 327 - 330
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Reference: [1] European Journal of Organic Chemistry, 2002, # 2, p. 327 - 330
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Reference: [1] Journal of Organic Chemistry, 1986, vol. 51, # 6, p. 953 - 954
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  • [ 147149-98-2 ]
Reference: [1] Journal of Medicinal Chemistry, 1993, vol. 36, # 6, p. 733 - 746
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  • [ 205444-22-0 ]
YieldReaction ConditionsOperation in experiment
42%
Stage #1: With n-butyllithium; diisopropylamine In tetrahydrofuran; hexane at -100℃; for 2 h; Inert atmosphere
Stage #2: With iodine In tetrahydrofuran; hexane at -78℃; for 1 h; Inert atmosphere
Stage #3: With n-butyllithium; diisopropylamine In tetrahydrofuran; hexane at -78℃; for 3 h; Inert atmosphere
To a cooled (-100°C) solution of diisopropylamine (14.5 mL, 104 mmol) in 80 mL of THF under inert atmosphere was added dropwise n-butyllithium (65 mL of a 1.6 M solution in hexanes, 104 mmol) followed by a lOmL of THF solution of 2-chloro-6- (trifluoromethyl) pyridine (9.5 g, 52 mmol). After two hours, the temperature was raised to -78°C and a 10 mL solution of iodine in THF (13 g, 52 mmol) was added. After 1 hour, the reaction was poured into water and extracted with DCM. The combined DCM layers were washed with brine, dried over sodium sulfate, and concentrated in vacuo to provide 14.9 g of a mixture of 6-chloro-3-iodo-2-(trifluoromethyl)pyridine and 2-chloro-4-iodo-6- (trifluoromethyl)pyridine. This crude material was resubjected to LDA as follows. To a cooled (-78°C) solution of diisopropylamine (14.5 mL, 104 mmol) in 80 mL of THF under inert atmosphere was added dropwise n-butyllithium (65 mL of a 1.6 M solution in hexanes, 104 mmol) followed by a 30 mL solution of the preceding crude mixture in THF. After three hours, the reaction mixture was poured in water and extracted with DCM. The DCM layers were washed with brine, dried (MgSC^), concentrated in vacuo, and purified via silica gel chromatography (0-20percent EtOAc/hexanes) to afford Intermediate 9A as a white solid (6.9 g, 42percent). l NMR (CDC13): δ 7.96 (s, 1H), 7.95 (s, 1H).
Reference: [1] Tetrahedron Letters, 1998, vol. 39, # 13, p. 1749 - 1752
[2] Patent: WO2018/5794, 2018, A2, . Location in patent: Page/Page column 82
[3] Patent: WO2016/44792, 2016, A1,
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Reference: [1] Patent: WO2018/5794, 2018, A2, . Location in patent: Page/Page column 82
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YieldReaction ConditionsOperation in experiment
96% at 60℃; for 17 h; Add palladium(II) acetate (200 mg, 2 w/wpercent) and l,l '-bis(diphenylphosphino)ferrocene (dppf) (400 mg, 4 w/wpercent) to a solution of 2-chloro-6-trifluoromethyl-pyridine (10.0 g, 55.1 mmol) in methanol (30 mL). To the orange solution add triethylamine (8.45 mL, 60.6 mmol). Purge the mixture with nitrogen and then maintain under an atmosphere of carbon monoxide (40 psig) at 60 0C for 17 h. Cool to ambient temperature and concentrate under a reduced pressure. Dissolve the solid in tert-butylmethyl ether (70 mL). Filter the resulting slurry over silica gel (10 g) and diatomaceous earth (10 g).Concentrate the filtrate to afford the title compound as a light orange solid (10.8 g, 96percent). 1H NMR (399.84 MHz, DMSO d6): 8.31-8.27 (m, IH), 8.14 (dd, J= 2.4, 6.4 Hz, 2H), 3.91 (s, 3H). HRMS (ESI) m/z (M+H)+ calcd for C8H7F3NO2: 206.0423, found 206.0422.
Reference: [1] Patent: WO2009/131814, 2009, A2, . Location in patent: Page/Page column 45
[2] Patent: US2015/18328, 2015, A1, . Location in patent: Paragraph 0720-0721
[3] Patent: WO2015/3640, 2015, A1, . Location in patent: Page/Page column 156
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YieldReaction ConditionsOperation in experiment
64.6%
Stage #1: With lithium diisopropyl amide In tetrahydrofuran at -78℃; for 2 h;
Stage #2: at -78 - 20℃; for 0.166667 h;
To a stirred solution of 2-chloro-6-(trifluoromethyl)pyridine (50.0 g, 1.0 eq.) in tetrahydrofuran (1.0 1) was added drop wise lithium diisopropylamide (LDA) (44.2 g, 1.5 eq.) at -78 °C. After 2 h dry carbondioxide (500 g) was added at -78 °C. The resulting reaction mixture was allowed to room temperature and stirred for 10 min. The reaction progress was monitored by TLC. After completion of reaction, the reaction mixture was acidified with 1N HCl up to pH 2 and extracted with ethyl acetate (2 x 500 mL). The combined organic layer was washed with water (500 mL), brine (500 mL), dried over anhydrous sodium sulfate and concentrated under reduced pressure to get crude product which was triturated with pet ether to get pure 2-chloro-6-(trifiuoromethyl)nicotinic acid (Int-15) (40.0 g, 64.6 percent).
Reference: [1] European Journal of Organic Chemistry, 2004, # 18, p. 3793 - 3798
[2] Patent: WO2013/64460, 2013, A1, . Location in patent: Page/Page column 125; 126
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Reference: [1] Patent: WO2012/68450, 2012, A1, . Location in patent: Page/Page column 201
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Reference: [1] Bioorganic and Medicinal Chemistry Letters, 2014, vol. 24, # 3, p. 750 - 755
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Reference: [1] Patent: WO2013/64460, 2013, A1,
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Reference: [1] Patent: WO2011/119663, 2011, A1,
[2] ACS Medicinal Chemistry Letters, 2013, vol. 4, # 10, p. 964 - 968
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Reference: [1] Patent: US2015/18328, 2015, A1,
[2] Patent: WO2015/3640, 2015, A1,
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