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Structure of 41014-43-1
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 41014-43-1 |
Formula : | C8H6ClNO |
M.W : | 167.59 |
SMILES Code : | ClCC1=NC2=C(O1)C=CC=C2 |
MDL No. : | MFCD05664964 |
InChI Key : | ANRDUCQCZKLSGF-UHFFFAOYSA-N |
Pubchem ID : | 2061989 |
GHS Pictogram: |
![]() ![]() |
Signal Word: | Danger |
Hazard Statements: | H302-H314 |
Precautionary Statements: | P260-P264-P270-P280-P301+P330+P331-P303+P361+P353-P304+P340-P305+P351+P338-P310-P363-P405-P501 |
Class: | 8 |
UN#: | 3265 |
Packing Group: | Ⅱ |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 9 |
Fraction Csp3 | 0.12 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 43.77 |
TPSA ? Topological Polar Surface Area: Calculated from |
26.03 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.07 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.43 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.41 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.63 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.85 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.28 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.95 |
Solubility | 0.188 mg/ml ; 0.00112 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.62 |
Solubility | 0.403 mg/ml ; 0.0024 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.93 |
Solubility | 0.0198 mg/ml ; 0.000118 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.6 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.38 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | In dichloromethane; at 0 - 20℃; | B. To a stirred suspension of 2-aminophenol (365 mg, 3.35 mmol) in dichloromethane (7 mL) at 00C was added compound ethyl 2-chloroacetimidate hydrochloride (798 mg, 5.05 mmol) portion-wise. After 1 hour 25 min. at 00C, the mixture was stirred at ambient temperature overnight. The mixture was filtered through Celite and the filtrate was concentrated. The residue was purified by column (hexanes/EtOAc, 7/3) to afford 2-(chloromethyl)benzoxazole as a pale oil (533 mg, 95%). |
86.5% | With acetic acid; In dichloromethane; at 0 - 20℃; for 1.41667h; | To a solution of 2-aminophenol (3.76 g,34.5 mmol) in methylene chloride at 0 C was added ethyl chloroacetimidate hydrochloride (7.98 g,50.5 mmol). After 85 min, the reaction mixture was allowed to warm to room temperature, while beingstirred overnight. The mixture was filtered over diatomite and concentrated to oil under reducedpressure. The resulting residue was purified by column chromatography on silica gel (petroleumether/acetone, 10:1 v:v) to obtain compound 3 as a white solid (5.00 g, 86.5%). m.p., 152-154 C;MS (+ESI) m/z 168.05 [M + H]+ |
75% | at 0℃; for 6h; | General procedure: General Method B: To the solution of substituted 2-aminophenol (1.0 equiv.) or substituted benzene-1, 2-diamine(1.0 equiv.) in DCM (or CH3OH), Int 1 (1.5 equiv.) was added and stirred at 0C overnight. The mixture was filteredwith celite. The filtrate was concentrated, purified by silica gel chromatography (EtOAc:hexane = 1:1) to afford thedesired products. |
3.99 g (65%) | In ethanol; dichloromethane; | Step 1) Preparation of 2-(Chloromethyl)benzoxazole A mixture of o-aminophenol (4.00 g, 36.6 mmol) and ethyl chloroacetimidate hydrochloride (8.68 g, 54.98 mmol) in ethanol (55 mL) was heated at reflux for 18 hours. The reaction mixture was cooled to room temperature and vacuum filtered. The filtrate was concentrated in vacuo, diluted with dichloromethane and filtered again. The methylene chloride filtrate was dried (MgSO4) and concentrated to afford 3.99 g (65%) of product as a brown oil which was used directly in the next step. 1 H NMR (CDCl3): delta7.73 (m, 1H, ArH), 7.56 (m, 1H, ArH), 7.38 (m, 2H, ArH), 4.76 (s, 2H, CH2 Cl). |
3.99 g (65%) | In ethanol; dichloromethane; | Step 1) Preparation of 2-(Chloromethyl)benzoxazole A mixture of o-aminophenol (4.00 g, 36.6 mmol) and ethyl chloroacetimidate hydrochloride (8.68 g, 54.98 mmol) in ethanol (55 mL) was heated at reflux for 18 hours. The reaction mixture was cooled to room temperature and vacuum filtered. The filtrate was concentrated in vacuo, diluted with methylene chloride and filtered again. The methylene chloride filtrate was dried (MgSO4) and concentrated to afford 3.99 g (65%) of product as a brown oil which was used directly in the next step. 1 H NMR (CDCl3): delta7.73 (m, 1H, ArH), 7.56 (m, 1H, ArH), 7.38 (m, 2H, ArH), 4.76 (s, 2H, CH2 Cl). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With triethylamine; In acetonitrile; | EXAMPLE 2 3-[(2-Benzoxazolylmethyl)amino]-5-ethyl-6-methyl-2-(1H)-pyridinone A solution of 3-amino-5-ethyl-6-methyl-2-(1H)-pyridinone (152 mg,1.0 mmol), <strong>[41014-43-1]2-chloromethyl-1,3-benzoxazole</strong> (1.07 mmol) and triethylamine (0.14 mL, 1.0 mmol) in acetonitrile (10 mmL) was stirred at reflux for 24 hrs. After concentrating under reduced pressure,the residue was flash chromatographed over silica gel. Elution with 5% MeOH- 95% CHCl3 gave 132 mg of product which was recrystallized from EtOH-water to give 95 mg of analytically pure product, mp 202-203C, with initial melting at 179 followed by resolidification. Anal. Calcd for | |
With triethylamine; In acetonitrile; | EXAMPLE 2 3-[(2-Benzoxazolylmethyl)amino]-5-ethyl-6-methyl-2-(1H)-pyridinone A solution of 3-amino-5-ethyl-6-methyl-2-(1H)-pyridinone (152 mg,1.0 mmol), <strong>[41014-43-1]2-chloromethyl-1,3-benzoxazole</strong> (1.07 mmol) and triethylamine (0.14 mL, 1.0 mmol) in acetonitrile (10 mmL) was stirred at reflux for 24 hrs. After concentrating under reduced pressure,the residue was flash chromatographed over silica gel. Elution with 5% MeOH- 95% CHCl3 gave 132 mg of product which was recrystallized from EtOH-water to give 95 mg of analytically pure product, mp 202-203C, with initial melting at 179 followed by resolidification, Anal. Calcd for C16H17N3O2: |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
46 mg (32%) | In N-methyl-acetamide; mineral oil; | Step E Preparation of 3-[(benzoxazol-2-yl)methoxy]-2-methoxy-5-ethyl-6-methylpyridine A quantity of 60% sodium hydride in mineral oil (24 mg, 0.6 mmol) was added to a solution of 2-methoxy-3-hydroxy-5-ethyl-6-methylpyridine (77 mg, 0.46 mmol) in dry dimethylformamide (2 mL). After gas evolution ceased, 2-(chloromethyl) benzoxazole (100 mg, 0.6 mmol) was added and the reaction mixture warmed at 60 C. for one hour. The reaction was then cooled, diluted with diethyl ether, the ether extract washed with water, dried (Na2 SO4), filtered and evaporated to give 151 mg of crude mixture. This mixture was flash chromatographed on silica gel, eluding with 0.5% methanol/chloroform. Combined appropriate fractions gave 46 mg (32%) of oily product. |
46 mg (32%) | In N-methyl-acetamide; mineral oil; | Step E : Preparation of 3-[(benzoxazol-2-yl)methoxy]-2-methoxy-5-ethyl-6-methylpyridine A quantity of 60% sodium hydride in mineral oil (24 mg, 0.6 mmol) was added to a solution of 2-methoxy-3-hydroxy-5-ethyl-6-methylpyridine (77 mg, 0.46 mmol) in dry dimethylformamide (2 mL). After gas evolution ceased, 2-(chloromethyl) benzoxazole (100 mg, 0.6 mmol) was added and the reaction mixture warmed at 60C for one hour. The reaction was then cooled, diluted with diethyl ether, the ether extract washed with water, dried (Na2SO4), filtered and evaporated to give 151 mg of crude mixture. This mixture was flash chromatographed on silica gel, eluding with 0.5% methanol/chloroform. Combined appropriate fractions gave 46 mg (32%) of oily product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90.2% | In a solution of 2-aminophenol (0.50 g, 4.6 mmol) dissolved inchlorobenzene (5 mL), 2-chloroacetyl chloride (0.52 g, 4.6 mmol) and pyridine (0.02 mL) were added.The mixture was stirred at room temperature for 2 h; then p-toluene sulfonic acid (0.08 g, 0.46 mmol)was added. The mixture was heated at reflux for 8 h and then cooled to room temperature. The solventwas removed under reduced pressure, and the resulting residue was dissolved in ethyl acetate (30 mL).The solution was washed with water and brine, dried over Na2SO4, and concentrated in vacuo.The residue was puried by chromatography on silica gel (petroleum ether:ethyl acetate = 10:1) to give13g (0.70 g, 90.2%) as a yellow oil. | |
85% | With triethylamine; In 5,5-dimethyl-1,3-cyclohexadiene; at 20 - 145℃;Inert atmosphere; | This compound was synthesized according to the previously described procedure.5 To a solution of 2-aminophenol (0.50 g, 4.58 mmol, 1.0 equiv.) in xylene (20 mL), chloroacetyl chloride (0.56 mL, 6.87 mmol, 1.5 equiv.) was added under argon, followed by drop-wise addition of Et3N (0.70 mL, 5.04 mmol, 1.1 equiv.). The reaction mixture was initially stirred for 2 h at room temperature and then overnight at 145 C. A saturated aqueous solution of NH4Cl (50 mL) was added to the reaction mixture, and the biphasic system was transferred to a separating funnel. The mixture was extracted with EtOAc (3× 20 mL), and the combined organic phases were washed with saturated brine solution (50 mL), dried over Na2SO4, and evaporated under reduced pressure. The crude product was purified by short flash column chromatography using EtOAc/n-hex = 1/4 as eluent, to obtain 0.65 g of the compound. Yield: 85%; transparent yellow oil (lit.5 colorless oil); 1H NMR (400 MHz, CDCl3): delta 4.76 (s, 2H,CH2), 7.35-7.42 (m, 2H, 2 × Ar-H), 7.55-7.57 (m, 1H, Ar-H), 7.74-7.76 (m, 1H, Ar-H). |
With triethylamine; In xylenes; at 20 - 145℃;Inert atmosphere; | Under argon, chloroacetyl chloride (122 muL, 1.5 mmol) was added to a solution of 2-aminophenol (111 mg, 1 mmol) in xylenes (4 mL). Triethylamine (153 muL, 1.1 mmol) was next added dropwise. The resulting mixture was stirred for 2 hours at room temperature then at 145C overnight. An aqueous solution of ammonium chloride was added, and the mixture was extracted with ethyl acetate. The combined organic extracts were washed with brine, then dried over sodium sulfate, filtered and evaporated to give crude 2-(chloromethyl)-1,3-benzoxazole. The latter compound was placed in a screwed-cap tube, and dissolved in THF (0.5 mL). An aqueous ammonium hydroxide solution (33%, 4 mL) was added. The reaction mixture was stirred 30 minutes at room temperature then 22 hours at 60C. Ethyl acetate was added and ammonia was evaporated. The aqueous layer was acidified to pH = I with cold 1N aqueous hydrochloric acid. Extraction with diethyl ether and ethyl acetate gave organic extracts which were discarded.. The aqueous layer was basified with aqueous sodium hydroxide to pH = 10, then extracted with diethyl ether and ethyl acetate. Combined organic extracts were dried over sodium sulfate, filtered and evaporated to give crude 1,3-benzoxazol-2-ylmethylamine (19.4 mg, 13%) as a brown solid. ESI-MS m/z 149 (M+H)+. |
General procedure: The synthetic routes for compounds 1-3 are outlined in Scheme 3, and the detailed procedures are presented as follows: (a) To a solution of 2-aminophenol (16.35g, 150mmol) and chloroacetyl chloride (16.95g, 150mmol) in dry chlorobenzene (200mL) is added pyridine (0.5ml). The solution is stirred at ambient temperature for 2h. To above solution is added p-toluenesulfonic acid (2.58g, 15mmol), the solution is refluxed till no water is discharged. After cooling to room temperature, the solution is washed with water (100mL×3) and a saturated solution of NaCl (50mL), respectively. The organic solution is collected and dried over Na2SO4, after evaporation of the solvent, the crude 2-(chloromethyl)benzoxazole (yellow oil, 23.1g, 93% yield) is obtained for next step without purification. (b) To a solution of 2-(chloromethyl)benzoxazole (23.1g, 139.5mmol) and tetrabutylammonium bromide (4.49g, 13.95mmol) in dichloromethane (150ml) is added Na2S·9H2O (40.2g, 167.4mmol) in H2O (100ml), the mixture solution is stirred at ambient temperature for 4h until the starting material disappeared (TLC detection). The mixture solution is washed with water (100ml×3), the washed organic solution is then dried over Na2SO4, after evaporation of the solvent, the crude bis(benzoxazol-2-ylmethyl) sulfane (brown oil, 33.8g, 82% yield) is obtained for next step reaction without purification. (c) Sodium (1.15g, 50mmol) is added to anhydrous MeOH, the solution is stirred for 1hat ambient temperature. To above solution is added dropwise bis(benzoxazol-2-ylmethyl)sulfane (2.98g, 10mmol) and diethyl oxalate (1.46g, 10mmol) in dry DMF (20ml). The mixture solution is refluxed for 6h until no starting material is detected (TLC detection). After cooled to room temperature, the solution is acidified with HCl (12N, 50ml) till pH=3, the solid is filtered off and washed successively with EtOH (30ml), saturation NaHCO3 (30ml) and H2O (30ml). After dried in vacuo, the target compound 1 is obtained (yellow solid, 2.45g). | ||
With pyridine; toluene-4-sulfonic acid; In chlorobenzene; at 20℃; for 8h;Reflux; | The 2 - aminophenol (1.635 g), chloroacetyl chloride 1.2 ml, pyridine 0.5 ml, 20 ml chlorobenzene by adding 50 ml round bottom flask, stir at room temperature 2 h, to join the toluene sulfonic acid 0.258 g, reflux 6 h, TCL [...] monitoring, after the reaction, evaporation chlorobenzene, adding 100 ml water, extracted with ethyl acetate, 20 m1 * 3, water-free magnesium sulfate for steaming and after drying. The product is used DCM column, to obtain yellow oily liquid is the product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
34% | With potassium carbonate; In acetone; for 4h;Reflux; | General procedure: To a solution of various substituted phenols (1 mmol) in dry acetone (30 mL) K2CO3 (1 mmol)and compound 3 or 4 (1 mmol) were added. After being stirred for 4 h at reflux temperature, thereaction mixture was cooled, filtered, and concentrated under vacuum. Then the residue was dilutedwith 30 mL ethyl acetate and sequentially washed with 30 mL 1 M HCl, aq. NaHCO3 solution andbrine in order. The organic layer was dried over MgSO4 and concentrated in vacuo. Purification of theresidue by chromatography on silica gel furnished target compounds. 1H-NMR, 13C-NMR and massspectroscopy (MS) of compounds 5a-m and 6a-m are shown in Supplementary Materials. |
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