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Chemical Structure| 606488-94-2 Chemical Structure| 606488-94-2

Structure of 606488-94-2

Chemical Structure| 606488-94-2

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Product Details of [ 606488-94-2 ]

CAS No. :606488-94-2
Formula : C7H12O3
M.W : 144.17
SMILES Code : O=C(C1CC(O)CCC1)O
MDL No. :MFCD19228828
InChI Key :JBZDHFKPEDWWJC-UHFFFAOYSA-N
Pubchem ID :5255726

Safety of [ 606488-94-2 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H315-H319
Precautionary Statements:P305+P351+P338

Computational Chemistry of [ 606488-94-2 ] Show Less

Physicochemical Properties

Num. heavy atoms 10
Num. arom. heavy atoms 0
Fraction Csp3 0.86
Num. rotatable bonds 1
Num. H-bond acceptors 3.0
Num. H-bond donors 2.0
Molar Refractivity 36.58
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

57.53 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

1.09
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

0.34
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

0.62
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

0.35
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

0.42
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

0.57

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-0.88
Solubility 18.9 mg/ml ; 0.131 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-1.11
Solubility 11.1 mg/ml ; 0.0772 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

0.14
Solubility 199.0 mg/ml ; 1.38 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

No
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.94 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.56

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.5

Application In Synthesis of [ 606488-94-2 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 606488-94-2 ]

[ 606488-94-2 ] Synthesis Path-Downstream   1~38

  • 1
  • [ 67-56-1 ]
  • [ 606488-94-2 ]
  • [ 37722-82-0 ]
YieldReaction ConditionsOperation in experiment
With thionyl chloride; at 70℃; for 16h; 10534] Step 1; To a solution of 3-hydroxycyclohexanecar- boxylic acid (1.25 g, 8.67 mmol) in MeOR (20 mE) at RT was added thionyl chloride (1.26 mE, 17.34 mmol). The resulting mixture was at 70 C. for 16 h. The reaction was cooled to RT, evaporated, and sequentially co-evaporated once with MeOR and twice with EtOAc to afford pure methyl 3-hydroxycyclo- hexanecarboxylate.
  • 2
  • [ 67-56-1 ]
  • [ 606488-94-2 ]
  • [ 6125-56-0 ]
  • [ 6125-56-0 ]
  • 3
  • [ 71-41-0 ]
  • [ 606488-94-2 ]
  • (+/-)-pentyl trans-3-hydroxycyclohexanecarboxylate [ No CAS ]
  • (+/-)-pentyl cis-3-hydroxycyclohexanecarboxylate [ No CAS ]
  • 4
  • [ 606488-94-2 ]
  • [ 76140-18-6 ]
  • 5
  • [ 606488-94-2 ]
  • [ 4350-83-8 ]
  • 6
  • [ 99-06-9 ]
  • [ 606488-94-2 ]
YieldReaction ConditionsOperation in experiment
With hydrogen; acetic acid;rhodium; In ethyl acetate; at 80℃; under 5171.62 Torr; for 18h; (lRS SR)-3-(^ (lZ)~2-tert-bntv 2~met YA-oxidoA 5'diazmA-- ylidene]amino}oxy)cyclohexanecarboxylic acidStep A: 3-hydroxycyclohexanecarboxylic acid; A solution of 3-hydroxybeitzoic acid (20.0 g, 145 rrrmol) in 600 mL EtOAc containing acetic acid (10.49 g, 175 mmol) and rhodium (3.0 g, 1.46 mmol) was put on hydrogenation apparatus at 100 psi and 80 C for 18 hours. After the catalyst was removed by filtration, the filtrate was concentrated down to afford the title compound.
11 g With hydrogen; sodium hydroxide; In water; at 150℃; under 45603.1 Torr; A I L pressure tank reactor (60 atm) containing a solution of 3-hydroxybenzoic acid (30 g, 217.20 mmol, 1.00 equiv), Raney Ni (5 g) and sodium hydroxide (6.4 g, 160.00 mmol, 0.74 equiv) in water (500 mL) was introduced H2 (gas, 60 atm) and the resulting solution was stirred overnight at 150C. After completion of the reaction, the reaction temperature was cooled down to room temperature and the solids were filtered out by filtration. The resulting solution was neutralized with 12 M HCl, extracted with 6 x 100 mL of tetrahydrofuran. The combined organic layers were dried over sodium sulfate and concentrated under vacuum to provide 3- hydroxycyclohexane-l-carboxylic acid (11 g, crude) as a white solid.
With hydrogen; sodium hydroxide; In water; at 150℃; [00354] Synthesis of compound 30.2. Into a 1 L pressure tank reactor (60 atm) containing a solution of 3-hydroxybenzoic acid (30 g, 217.20 mmol, 1.00 equiv), Raney Ni (5 g) and sodium hydroxide (6.4 g, 160.00 mmol, 0.74 equiv) in water (500 mL) was introduced H2 (gas, 60 atm) and the resulting solution was stirred overnight at 150C. After completion of the reaction, the reaction temperature was cooled down to room temperature and the solids were filtered out by filtration. The resulting solution was neutralized with 12 M HC1, extracted with 6 x 100 mL of tetrahydrofuran. The combined organic layers were dried over sodium sulfate and concentrated under vacuum to provide 30.2 (11 g, crude) as a white solid.
  • 7
  • [ 606488-94-2 ]
  • [ 67-63-0 ]
  • (±)-isopropyl cis-3-hydroxycyclohexane-1-carboxylate [ No CAS ]
  • (±)-isopropyl cis-3-hydroxy cyclohexane-1-carboxylate [ No CAS ]
  • 8
  • [ 606488-94-2 ]
  • 7,7-d2-6-Oxabicyclo<3.2.1>octane [ No CAS ]
  • 9
  • [ 606488-94-2 ]
  • cis-Hydroxycyclohexyl-1,1-dideuteromethanol [ No CAS ]
  • 10
  • [ 606488-94-2 ]
  • [ 21531-47-5 ]
  • 11
  • [ 606488-94-2 ]
  • [ 51552-72-8 ]
  • 12
  • [ 606488-94-2 ]
  • (4aS,7R,8aR)-1-Methyl-decahydro-quinoline-7-carboxylic acid methyl ester [ No CAS ]
  • 13
  • [ 606488-94-2 ]
  • [ 102437-55-8 ]
  • 14
  • [ 606488-94-2 ]
  • [ 102437-44-5 ]
  • 15
  • [ 606488-94-2 ]
  • (4aR,7S,8aS)-1-Formyl-decahydro-quinoline-7-carboxylic acid methyl ester [ No CAS ]
  • 16
  • [ 606488-94-2 ]
  • methyl 3-azido-4-(3-hydroxypropyl)cyclohexanecarboxylate [ No CAS ]
  • 17
  • [ 606488-94-2 ]
  • [ 102437-56-9 ]
  • 18
  • [ 606488-94-2 ]
  • [ 102437-57-0 ]
  • 19
  • [ 606488-94-2 ]
  • methyl 3-azido-4-(3-(tosyloxy)propyl)cyclohexanecarboxylate [ No CAS ]
  • 20
  • [ 606488-94-2 ]
  • [ 102437-53-6 ]
  • 21
  • [ 606488-94-2 ]
  • [ 102437-53-6 ]
  • 22
  • [ 606488-94-2 ]
  • [ 41118-33-6 ]
  • 23
  • [ 606488-94-2 ]
  • [ 41118-25-6 ]
  • 24
  • [ 606488-94-2 ]
  • [ 102437-45-6 ]
  • 25
  • [ 606488-94-2 ]
  • [ 74612-26-3 ]
  • 26
  • [ 98-89-5 ]
  • [ 1123-28-0 ]
  • [ 874-61-3 ]
  • [ 609-69-8 ]
  • [ 3685-26-5 ]
  • [ 3685-26-5 ]
  • [ 606488-94-2 ]
  • 27
  • [ 606488-94-2 ]
  • [ 100-44-7 ]
  • cis-benzyl 3-hydroxycyclohexanecarboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
With triethylamine; In N,N-dimethyl-formamide; at 20℃; Step B: benzyl n£i?3./?SV3-hydroxycycIohexanecarboxylate; To a solution of <strong>[606488-94-2]3-hydroxycyclohexanecarboxylic acid</strong> (19.5 g, 149 mmol) in 180 mL DMF at room temperature was added benzyl chloride (18.83 g, 149 mmol), followed by Et3N (42.1 g, 406 mmol). The mixture was stirred at room temperature over night. The precipitate was removed by Bltration, and the filtrate was diluted ether (300 ml) and washed with water (2x300 ml) and brine, dried over MgS04j and concentrated. The residue was purified by flash chromatography (Biotage 65M) using 0 to 0% EtOAc/hexane gradient, affording the title compound: .H NMR (500 MHz, CDC13) delta 7.35 (m, 5H), 5.13 (s, 2H), 4.09 (m, 1H), 2.85 (m, 1H), 12.40 (m, 1H), 2.00-1.60 (m, 8H).
  • 28
  • [ 606488-94-2 ]
  • benzyl (1SR,3SR)-3-iodocyclohexanecarboxylate [ No CAS ]
  • 29
  • [ 606488-94-2 ]
  • benzyl (1RS,3SR)-3-([(1Z)-2-tert-butyI-2-methyl-1-oxido-1λ5-diazan-1-ylidene]amino}oxy)cyclohexanecarboxylate [ No CAS ]
  • 30
  • [ 606488-94-2 ]
  • (1RS,3SR)-3-([(1Z)-2-tert-butyI-2-methyl-1-oxido-1λ5-diazan-1-ylidene]amino}oxy)cyclohexanecarboxylic acid [ No CAS ]
  • 31
  • [ 606488-94-2 ]
  • [ 1537184-91-0 ]
  • 32
  • [ 606488-94-2 ]
  • [ 1537184-93-2 ]
  • 33
  • [ 606488-94-2 ]
  • [ 1537184-99-8 ]
  • 34
  • [ 606488-94-2 ]
  • [ 1537187-85-1 ]
  • 35
  • [ 606488-94-2 ]
  • [ 16205-98-4 ]
YieldReaction ConditionsOperation in experiment
8.7 g With chromium(VI) oxide; sulfuric acid; In water; acetone; at 0 - 20℃; for 2.5h; The Jones oxidation reagent was prepared from sulfuric acid (30 mL), Cr03 (8.1 g) and H20 (30 mL) in an ice/water bath. A solution of 3-hydroxycyclohexane-l-carboxylic acid (11 g, 76.3 mmol, 1.00 equiv) in acetone (150mL) was added slowly the prepared Jones reagent at 0 C in 30 min. After addition, the resulting solution was stirred for 2 h at room temperature and the solids were filtered out. The resulting solution was extracted with DCM (3 xlOO mL). The combined organic layers were washed with brine and dried over sodium sulfate and concentrated under vacuum to give the desired 3-oxocyclohexane-l-carboxylic acid (8.7 g, crude) as a yellow oil.
With Jones reagent; In acetone; at 0 - 20℃; for 2.5h; [00355] Synthesis of compound 30.3. The Jones oxidation reagent was prepared from sulfuric acid (30 mL), Cr03 (8.1 g) and H20 (30 mL) in an ice/water bath. To a solution of 30.2 (11 g, 76.3 mmol, 1.00 equiv) in acetone (150mL) was added slowly the prepared Jones reagent at 0 C in 30 min. After addition, the resulting solution was stirred for 2 h at room temperature and the solids were filtered out. The resulting solution was extracted with DCM (3 xlOO mL). The combined organic layers were washed with brine and dried over sodium sulfate and concentrated under vacuum to give the desired 30.3 (8.7 g, crude) as a yellow oil.
  • 36
  • [ 606488-94-2 ]
  • [ 33668-25-6 ]
  • 37
  • [ 606488-94-2 ]
  • [ 56975-25-8 ]
  • 38
  • [ 606488-94-2 ]
  • [ 1029689-49-3 ]
 

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