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CAS No. : | 622-95-7 | MDL No. : | MFCD00040714 |
Formula : | C7H6BrCl | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | KQNBRMUBPRGXSL-UHFFFAOYSA-N |
M.W : | 205.48 | Pubchem ID : | 69329 |
Synonyms : |
|
Num. heavy atoms : | 9 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.14 |
Num. rotatable bonds : | 1 |
Num. H-bond acceptors : | 0.0 |
Num. H-bond donors : | 0.0 |
Molar Refractivity : | 44.29 |
TPSA : | 0.0 Ų |
GI absorption : | Low |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -5.17 cm/s |
Log Po/w (iLOGP) : | 2.32 |
Log Po/w (XLOGP3) : | 3.35 |
Log Po/w (WLOGP) : | 3.08 |
Log Po/w (MLOGP) : | 3.68 |
Log Po/w (SILICOS-IT) : | 3.49 |
Consensus Log Po/w : | 3.18 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -3.65 |
Solubility : | 0.0458 mg/ml ; 0.000223 mol/l |
Class : | Soluble |
Log S (Ali) : | -3.03 |
Solubility : | 0.193 mg/ml ; 0.000939 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -4.28 |
Solubility : | 0.0109 mg/ml ; 0.000053 mol/l |
Class : | Moderately soluble |
PAINS : | 0.0 alert |
Brenk : | 1.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.52 |
Signal Word: | Danger | Class: | 8 |
Precautionary Statements: | P280-P305+P351+P338-P310 | UN#: | 1759 |
Hazard Statements: | H314 | Packing Group: | Ⅱ |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With tetra-(n-butyl)ammonium iodide In tetrahydrofuran at 20℃; for 16 h; | Under a nitrogen atmosphere, compound 10 (0.24mmol, 49mg) was dissolved in freshly distilled THF (0.75mL), then cooled to 0°C. To this solution was added 60percent NaH in oil (0.36mmol, 14.4mg) and the mixture was stirred at 0°C for 5min. 4-Chlorobenzyl bromide (0.26mmol, 54mg) was added followed by the addition of tetrabutylammonium iodide (0.024mmol, 9mg). The mixture was stirred at rt overnight, then diluted with water (2mL) and EtOAc (5mL). The aqueous phase was separated and extracted twice with EtOAc. The combined organic phases were dried over MgSO4, filtered and concentrated in vacuo. The crude was purified by chromatography on silica gel (eluent: EtOAc) to afford the desired target 11 in 65percent yield (m=51mg) as a colorless solid. Mp 101–102°C. 1H NMR (300MHz, CDCl3) δ 7.83–7.77 (m, 1H), 7.32–7.22 (m, 5H), 7.06 (d, J=8.7Hz, 2H), 5.58 (s, 2H), 3.90 (s, 2H), 2.58 (m, 4H), 1.76 (m, 4H); 13C NMR (75MHz, CDCl3) δ 152.3, 142.5, 135.9, 135.3, 133.6, 129.1 (2C), 128.1 (2C), 122.9, 122.7, 120.0, 109.7, 54.8 (2C), 53.2, 46.8, 23.7 (2C); HRMS (ESI) Calcd for C19H21N3Cl [M+H]+ 326.1424, Found 326.1427; FTIR (neat) cm−1 2958, 2927, 2875, 2810, 1488, 1463, 1403, 1294, 1088, 1034, 1014, 742, 487. |
195 mg | Stage #1: With sodium hydride In tetrahydrofuran; mineral oil at 0℃; for 0.0833333 h; Inert atmosphere Stage #2: With tetrabutylammomium bromide In tetrahydrofuran; mineral oil at 20℃; Inert atmosphere |
1-(4-Chlorobenzyl)-2-(pyrrolidin-1-ylmethyl)-1H-benzimidazole dihydrochloride (1). Under an atmosphere of nitrogen, compound 36 (250 mg, 1.24 mmol, 1 equiv) was dissolved in freshly distilled warm tetrahydrofuran (THF) (2.5 mL), then cooled to 0 °C. To this solution was added 60percent NaH in oil (100 mg, 60 mg pure, 2.48 mmol, 2 equiv) and the mixture stirred at 0 °C for 5 min. 4-Chlorobenzyl bromide (255 mg, 1.24 mmol, 1 equiv) was added followed by the addition of tetra-n-butylammonium bromide (23 mg, 0.07 mmol, 6 mol percent). The mixture was stirred at rt overnight, then diluted with a solution of water (2 drops) in THF (5 mL). The solution was filtered through Celite, and the Celite was washed with THF (50 mL) and then EtOAc (50 mL). The filtrate was concentrated and the remaining residue purified by flash column chromatography on silica gel (EtOAc) to give the free base (195 mg) as an oil (Rf = 0.46, EtOAc). To a solution of the free base in MeOH (2 mL) was added a solution of 37percent aqueous HCl (158 mg, 1.60 mmol, 2.7 equiv) in MeOH (2 mL). The mixture was concentrated, Et2O (5 mL) was added, and the mixture concentrated again. High-vacuum drying gave the product (242 mg, 0.61 mmol, 49percent) as a white solid; mp 232-234 °C; Rf = 0 (EtOAc); 1H NMR (400 MHz, CD3OD): δ 2.10-2.26 (m, 4H), 3.55-3.78 (m, 4H), 5.21 (s, 2H), 5.95 (s, 2H), 7.31 (d, J = 8.4 Hz, 2H), 7.40 (d, J = 8.4 Hz, 2H), 7.53-7.68 (m, 3H), 7.92 (d, J = 8.0 Hz, 1H); 13C NMR (100 MHz, CD3OD): δ 24.0, 48.0, 50.0, 56.5, 114.4, 117.3, 128.0, 128.1, 129.9, 130.4, 134.0, 134.3, 135.1, 135.7, 144.5; HRMS (ESI) [M-Cl]+ Calcd for C19H21N3Cl: 326.1424. Found: 326.1433. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With magnesium; triethylamine In tetrahydrofuran at 65℃; for 15 h; | Example 8Preparation of pinacol ester of 4-chlorobenzylboronic acid Magnesium turnings (2.4 mg, 0.1 mmol, 10 mol percent) are introduced into a 2 necks Schlenk-type flask, provided with a magnetic stirring bar and topped by a coolant, then 10 ml of distilled THF are added. Triethylamine (59 mg, 1 mmol) and pinacolborane (0.384 g, 3 mmol) are introduced therein. 4-chlorobenzyl bromide (0.207 g, 1 mmol) dissolved into 10 ml of distilled THF is then added drop by drop in the solution using a dropping funnel. Thereafter, the reactive mixture is stirred for approximately 15 hours at THF reflux (65° C.).At the end of the reaction, the crude reaction product is hydrolyzed by 20 ml of water neutral and extracted by diethyl ether (3.x.40 ml). The joined organic phases are washed by 2.x.ml of neutral water then dried on MgSO4. After solvent evaporation, the pinacol ester is obtained with a yield of 90percent at a total conversion of the starting bromide (yield/conversion of 90percent). The resulting boronic ester is analyzed by GC, NMR 1H and 13C and GC/MS.CharacterizationsNMR 1H: 7.2 (2H, D, 8 Hz); 6.9 (2H, D, 8 Hz); 1.9 (2H, s); 1.3 (12H, s).NMR 13C: 138; 131.3; 130.5; 128.8; 83.8; 33.5; 21.4.Mass spectrometry: 254-252 (M+, 1-4percent); 127 (32percent); 126 (20percent); 125 (100percent); 124 (20percent); 63 (12percent). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
31% | With copper(l) iodide; lithium methanolate; triphenylphosphine In N,N-dimethyl-formamide at 20℃; for 14 h; Inert atmosphere | 4-Chlorobenzyl bromide (640 mg, 3.12 mmol), boronic acid pinacol ester (1.2 mg, 10 mmol), CuI (97 mg,0.5 mmol), LiOMe (365 mg, 4.68 mmol), PPh3 (106 mg, 0.41 mmol) and DMF (15 mL) were added to a 100 mL reaction flask. After replacing three times with nitrogen, the reaction was carried out at room temperature for 14 h, and TLC was monitored until the starting material was completely reacted. The reaction solution was poured into 100 mL of water, and the CuI was removed by filtration and washed three times with EA. The filtrate was collected and separated, and the aqueous phase was extracted with EA (60 mL*3). The title compound 30b (250 mg, 31percent) was obtained. |
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