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CAS No. : | 869891-41-8 | MDL No. : | MFCD20133912 |
Formula : | C7H8N2O4 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | WMENLTSMANJRGJ-UHFFFAOYSA-N |
M.W : | 184.15 | Pubchem ID : | 28818763 |
Synonyms : |
|
Num. heavy atoms : | 13 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.29 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 6.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 42.32 |
TPSA : | 92.54 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.74 cm/s |
Log Po/w (iLOGP) : | 1.27 |
Log Po/w (XLOGP3) : | 0.96 |
Log Po/w (WLOGP) : | -0.02 |
Log Po/w (MLOGP) : | -0.41 |
Log Po/w (SILICOS-IT) : | 0.24 |
Consensus Log Po/w : | 0.41 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.8 |
Solubility : | 2.95 mg/ml ; 0.016 mol/l |
Class : | Very soluble |
Log S (Ali) : | -2.49 |
Solubility : | 0.595 mg/ml ; 0.00323 mol/l |
Class : | Soluble |
Log S (SILICOS-IT) : | -0.97 |
Solubility : | 19.9 mg/ml ; 0.108 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 2.02 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P280-P301+P312-P302+P352-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H302-H315-H320-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | at 105℃; for 6 h; | Preparation 1Methyl 2,4-dichloro-6-methylpyrimidine-5-carboxylate To a suspension of methyl 6-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylate (1 g, 5.43 mmol) in POCl3 (10 mL) was added 10 drops of N,N-dimethylaniline. The reaction mixture was heated at 105° C. for 6 h until it became a clear solution. It was then cooled, concentrated under reduced pressure, poured over ice, and extracted with EtOAc. The organic extract was washed with water and brine, dried and concentrated under reduced pressure to give the title compound as greenish-yellow solid (940 mg, 78percent). [M+H] calc'd for C7H6Cl2N2O2, 222. found, 221, 223. |
70.2% | at 110℃; for 2 h; | Synthesis of compound 1.5. A solution of 1.4 (12.1 g, 0.06576 mol, 1.00 equiv) in phosphorusoxychloride (120ml) was heated at 110 °C for 2 hrs. After completion, reaction mixture was concentrated under reduced pressure and residue was quenched in ice. The crude product was extracted twice with ethyl acetate. The organic layers were dried over sodium sulfate and concentrated under reduced pressure to afford crude material which was purified by flash column chromatography This resulted in pure compound 1.5 (10.2g, 70.20percent>). MS (ES): m/z 222.8 [M+H]+ |
59% | at 95℃; for 3 h; | c) Synthesis of 2,4-dichloro-6-methyl-pyrimidine-5-carboxylic acid methyl ester 4-Methyl-2,6-dioxo-3H-pyrimidine-5-carboxylic acid methyl ester (0.64 g, 3.48 mmol) is dissolved in phosphoryl chloride (6.5 ml) and to it is added tributylamine (1.75 ml). The resulting mixture is heated at 95° C. for 3 h. Excess phosphoryl chloride is distilled of and ice-water is added to the reaction mixture and extracted with EtOAc (3*30 ml). The combined organic layers are washed with water (30 ml), brine (30 ml), evaporated to dryness to get the crude product, which is purified by column chromatography (silica gel, 5percent EtOAc/hexane) affording 2,4-dichloro-6-methyl-pyrimidine-5-carboxylic acid methyl ester (0.45 g, 2.04 mmol, 59percent). |
59% | at 95℃; for 3 h; | 4-Methyl-2,6-dioxo-3H-pyrimidine-5-carboxylic acid methyl ester (0.64 g, 3.48 mmol) is dissolved in phosphoryl chloride (6.5 ml) and to it is added tributylamine (1.75 ml). The resulting mixture is heated at 95 °C for 3 h. Excess phosphoryl chloride is distilled of and ice-water is added to the reaction mixture and extracted with EtOAc (3 x 30 ml). The combined organic layers are washed with water (30 ml), brine (30ml), evaporated to dryness to get the crude product, which is purified by column chromatography (silica gel, 5percent /hexane) affording 2,4-dichloro-6-methyl-pyrimidine-5-carboxylic acid methyl ester (0.45 g, 2.04 mmol, 59percent). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
58% | With triethylamine In water at 50 - 60℃; for 21 h; | b) Synthesis of 4-methyl-2,6-dioxo-3H-pyrimidine-5-carboxylic acid methyl ester A mixture of 3-amino-2-(ethoxycarbonyl-carbamoyl)-but-2-enoic acid methyl ester (0.71 g, 3.08 mmol) and triethylamine (30percent aqueous solution, 0.56 ml) is stirred at 50° C. for 18 h. Another portion of triethylamine (30percent aqueous solution, 0.14 ml) is added and the reaction mixture is further at 60° C. for 3 h. The reaction mixture is evaporated and then acidified with AcOH. The resulting solid is collected by filtration and dried under vacuum to get 4-methyl-2,6-dioxo-3H-pyrimidine-5-carboxylic acid methyl ester (0.33 g, 1.79 mmol, 58percent), which is directly used for the next step. |
58% | With triethylamine In water at 50 - 60℃; for 21 h; | A mixture of 3-amino-2-(ethoxycarbonyl-carbamoyl)-but-2-enoic acid methyl ester (0.71 g, 3.08 mmol)and triethylamine (30 percent aqueous solution, 0.56 ml) is stirred at 50 °C for 18 h. Another portion of triethylamine (30 percent aqueous solution, 0.14 ml) is added and the reaction mixture is further at 60° for 3h. The reaction mixture is evaporated and then acidified with AcOH. The resulting solid is collected by filtration and dried under vacuum to get 4-methyl-2,6-dioxo-3H-pyrimidine-5-carboxylic acid methyl ester (0.33 g, 1.79 mmol, 58percent), which is directly used for the next step. |
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