Structure of 10268-06-1
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 10268-06-1 |
Formula : | C8H8ClNO |
M.W : | 169.61 |
SMILES Code : | O=C(N)CC1=CC=CC=C1Cl |
MDL No. : | MFCD00176724 |
InChI Key : | WBJGNXYBEZIOES-UHFFFAOYSA-N |
Pubchem ID : | 641141 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H319 |
Precautionary Statements: | P305+P351+P338 |
Num. heavy atoms | 11 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.12 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 44.13 |
TPSA ? Topological Polar Surface Area: Calculated from |
43.09 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.4 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.47 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.37 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.84 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.94 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.6 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.09 |
Solubility | 1.38 mg/ml ; 0.00814 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.98 |
Solubility | 1.77 mg/ml ; 0.0104 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.0 |
Solubility | 0.169 mg/ml ; 0.000998 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.29 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.25 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
78% | With water; In ethanol; at 50 - 60℃; for 3.5h; | General procedure: Amberlyst A26 OH (0.11 g) was added to a suspension ofthe nitrile (1 mmol) in EtOH?H2O (0.5 mL). The reactionmixture was stirred at 50?60 °C, and the progress of thereaction was followed by TLC. After the completion ofreaction, the mixture was diluted with acetone or EtOAc andfiltered to remove the catalyst. The desired products wereisolated by evaporation of the EtOAc or addition of H2O and filtration of the precipitate. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | To a solution of 2?chiorophenylacetic acid 129 (2.00 g, 11.80 mmcl,1.00 equiv.) in dry CH,C12 (30.0 mL) was added thionyl chloride (9.80mL, 135.3 irimol, 11.5 equiv.) at 0 °C. The reaction was refiuxed for 2h. The solvent was removed under reduced pressure and the residue was azeotroped with toluene (2 x 5.00 mL) . To a solution of crude acyl chloride in THF (30.0 ml) was added NH3 H20 (60.0 mL), and the reactionwas stirred at room temperature for overnight. The solvent was removed under reduced pressure, and the precipitate was filtered, washed with water, and dried under vacuum to afford the title compound as a white solid (1.77 g, 10.5 mmcl, 89percent yield) . NMR Spectroscopy: 1H NMR (500 MHz, (CD3)2S0, 25 00 6): 7.44 (s, 1H), 7.41?7.38 (m, lH), 7.35?7.33(m, lH) , 7.28?7.24 (m, 2H) , 6.96 (s, lH) , 3.54 (s, 2H) . 13C NMR (125 MHz, (CD3)2S0, 25 00 6): 170.8, 134.3, 133.5, 132.0, 128.8, 128.2,126.9. The ?H NMR data was in good agreement with values reported in the literature (O?Connell, 3. et al. 2006). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
The alpha-ketoester Compound 1h (44 mg, 0.16 mmol) and amide Compound 2a (19.3 mg, 0.11 mmol) were combined in dry THF (4 mL) under argon and cooled with an ice bath as a solution of 1.0 M potassium t-butoxide in THF (0.7 mL, 0.7 mmol) was added dropwise. The mixture was stirred at 0° C. with for 30 min, then rt for 2 h. The reaction solution was cooled back to 0° C., and quenched with 12 N HCl (4 mL). The mixture was stirred for 20 min and then basified with 3 N NaOH. The mixture was extracted with EtOAc and the combined extracts were washed with brine, dried (Na2SO4) and evaporated in vacuo to a yellow oil, which was then purified by flash column chromatography (DCM/MeOH/NH4OH; 93:7:0.7) to afford Compound 2 (6 mg) as an orange-yellow flaky solid. 1H NMR (CDCl3) delta 8.27 (d, J=5.7 Hz, 1H), 8.08 (s, 1H), 7.59 (s, 1H), 7.39 (m, 4H), 7.28 (m, 1H), 4.32 (t, J=6.7 Hz, 2H), 3.34 (s, 3H), 3.27 (t, J=5.6 Hz, 2H), 2.10 (m, 2H). ES-MS m/z 396 (MH+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
55% | A mixture of Compound 1c (322 mg, 0.857 mmol) and Compound 1d (121 mg, 0.714 mmol) in 7 ML of anhydrous THF was stirred under nitrogen and cooled in an ice bath while treating dropwise with 2.9 ML of 1 N potassium t-butoxide in THF. The mixture was stirred for 30 minutes in an ice bath then at room temperature for another 30 min.The reddish mixture was then cooled down and then 2 ML of concentrated HCl was added dropwise.The mixture was stirred for 5 min.ethyl acetate (150 ML) and H2O (30 ML) were added.The organic layer was separated and washed with saturated NaHCO3 and brine, dried over anhydrous sodium sulfate and concentrated in vacuo.The crude product was separated by flash chromatography on silica gel (CH2Cl2/MeOH/NH4OH, from 98:2:0.2 to 95:5:0.5) to yield 150 mg (55percent) of Compound 1 as a yellow solid. 1H NMR (CDCl3) delta 8.21 (dd, J=1.5, 4.7 Hz, 1H), 8.17 (s, 1H), 7.48-7.33 (m, 4H), 6.78 (dd, J=4.7, 8.1 Hz, 1H), 6.66 (dd, J=1.5, 8.1 Hz, 1H), 4.5 (dd, J=2.6, 7.1 Hz, 2H), 3.41 (t, J=5.5 Hz, 2H), 2.03 (m, 2H). ES-MS m/z 382 (MH+). Using the procedure of Example 1 and the appropriate reagents and starting materials known to those skilled in the art, other compounds of the present invention may be prepared including, but not limited to |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
To a THF solution (0.4 mL) of 2-[1-(2-trimethylsilanylethoxymethyl)-1H-[1,2,4]triazol-3-yl]acetamide Compound 11c (0.03 g, 0.116 mmol) and oxo-[1-(2-trimethylsilanylethoxymethyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]acetic acid ethyl ester Compound 1d (0.04 g, 0.116 mmol) at 0 C. was added potassium tert-butoxide (0.232 mL, 1 M solution in THF, 0.232 mmol) dropwise under nitrogen. After 15 minutes the mixture was allowed to warm to 23 C. and stirred for 1 hour. Conc. HCl (1 mL) was added and the solution stirred for 5 minutes then poured into EtOAc (10 mL). The aqueous layer was extracted with EtOAc (3?10 mL) then the organic layer was dried (MgSO4) and concentrated. The product was purified by column chromatography (SiO2) to give 0.017 g of Compound 11e as a yellow solid: 1H NMR (300 MHz, CDCl3) ? 9.13 (s, 1H), 8.40 (dd, J=4.7, 1.5 Hz, 1H), 8.10 (s, 1H), 8.00 (dd, J=8.1, 1.3 Hz, 1H), 7.18 (dd, J=8.1, 4.7 Hz, 1H), 5.80 (s, 2H), 3.68 (br t, J=8.3 Hz, 2H), 0.96 (br t, J=8.3 Hz, 2H), ?0.05 (s, 9H); MS (ES) m/z: 433 (M+Na+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
23% | With potassium tert-butylate; In tetrahydrofuran; at 0℃; for 5h;Inert atmosphere; | To a solution of compound methyl 2-(5-chloro-1--(2-fluoroethyl)-1H-- indol?3?yl)?2-oxoacetate (200 mg, 0.710 mmol, 1.00 equiv.) and compound <strong>[10268-06-1]2-(2-chlorophenyl)acetamide</strong> (132 mg, 0.780 mmol, 1.10 equiv.)in THF (10 mL, 0.071 M) was added with t-BuOK solution (190 mg, 1.69 mmol, 2.40 equivj/THF (5.00 mL) at 0 °C under nitrogen atmosphere. After the reaction mixture was stirred at 0 00 for another 5 h, it was quenched by iN HC1 (10.0 mL). The excess acid was neutralized by sodium bicarbonate. The solution was extracted with EtOAc (10 mL x3), washed with brine, dried with MgSO4, filtered, and concentrated in vacuo. The residue was purified through column chromatography using EtCAc:hexanes (1 : 1.5 (v/v)) to afford the title compound as a light yellow solid (64.8 mg, 0.161 rnm0l, 23percent yield). NMR Spectroscopy: ?H NMR (700 MHz, (CD3)2S0, 25 °C, ) : 11.22 (s, lH), 8.21 (s, lH), 7.58(d, J = 8.7 Hz, lH), 7.55 (d, J = 7.9 Hz, lH), 7.51?7.49 (m, 1H),7.41?7.40 (m, 2H), 7.13 (dd, J 2.0, 8.7 Hz, 1H), 6.19 (d, J 2.0Hz, 1H), 4.76 (t, J = 4.6 Hz, lH), 4.70 (t, J= 4.6 Hz, 1H), 4.65 (t,J 4.6 Hz, 1H), 4.60 (t, J = 4.6 Hz, 1H). 13C NMR (175 MHz, (CD3)2S0,25 °C, ) 171.7, 171.2, 135.7, 135.0, 134.2, 133.5, 132.2, 130.8,129.4, 127.6, 127.0, 126.2, 125.2, 122.2, 119.8, 112.4, 104.4, 83.0,82.0, 46.6 (d, J =19.9 Hz). Z9p NMR (376 MHz, (0D3)2S0, 25 °C, oe) -222.1 (m) . HRMS (ESI?TOF) (m/z) : calcd for C2flH14N2O2FC12 ( [M + H]),403.0416, found, 403.0408. |
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