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Chemical Structure| 1048330-10-4 Chemical Structure| 1048330-10-4

Structure of 1048330-10-4

Chemical Structure| 1048330-10-4

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Product Details of [ 1048330-10-4 ]

CAS No. :1048330-10-4
Formula : C9H11BO4
M.W : 193.99
SMILES Code : CC1=CC=C(B(O)O)C=C1C(OC)=O
MDL No. :MFCD13191800
InChI Key :CDWTTYCJDYKRNE-UHFFFAOYSA-N
Pubchem ID :54758887

Safety of [ 1048330-10-4 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302
Precautionary Statements:P280-P305+P351+P338

Computational Chemistry of [ 1048330-10-4 ] Show Less

Physicochemical Properties

Num. heavy atoms 14
Num. arom. heavy atoms 6
Fraction Csp3 0.22
Num. rotatable bonds 3
Num. H-bond acceptors 4.0
Num. H-bond donors 2.0
Molar Refractivity 52.51
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

66.76 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

0.0
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

1.04
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

-0.54
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

0.52
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-0.39
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

0.13

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.82
Solubility 2.96 mg/ml ; 0.0152 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-2.03
Solubility 1.8 mg/ml ; 0.00928 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-1.75
Solubility 3.41 mg/ml ; 0.0176 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

No
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.74 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

1.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

2.02

Application In Synthesis of [ 1048330-10-4 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 1048330-10-4 ]

[ 1048330-10-4 ] Synthesis Path-Downstream   1~18

  • 1
  • [ 1048330-10-4 ]
  • [ 1071958-95-6 ]
  • C30H34ClNO6 [ No CAS ]
  • 2
  • [ 1048330-10-4 ]
  • [ 1071959-31-3 ]
  • [ 1071959-33-5 ]
  • 3
  • [ 1048330-10-4 ]
  • [ 121489-29-0 ]
  • [ 603123-25-7 ]
  • 4
  • [ 478375-39-2 ]
  • [ 1048330-10-4 ]
  • 5
  • [ 1048330-10-4 ]
  • C31H34ClNO6 [ No CAS ]
  • 6
  • [ 1048330-10-4 ]
  • [ 603124-25-0 ]
  • 7
  • [ 79669-50-4 ]
  • [ 1048330-10-4 ]
  • 8
  • [ 1048330-10-4 ]
  • (R)-3-(((tert-butoxycarbonyl)((R)-1-(4-fluoro-3-methoxyphenyl)ethyl)amino)methyl)-3,4-dihydronaphthalen-1-yl trifluoromethanesulfonate [ No CAS ]
  • C34H38FNO5 [ No CAS ]
YieldReaction ConditionsOperation in experiment
With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In ethanol; water; toluene; at 65.0℃; for 1.0h;Inert atmosphere; General procedure: To a solution of Intermidiate-1 (1 g, 1.781 mmol), methyl 3-(4,4,5,5-tetramethyl-l ,3,2- dioxaborolan-2-yl)benzoate (0.467 g, 1.781 mmol) and sodium carbonate (0.321 g, 5.34 mmol) in ethanol (5 mL), toluene (5 mL) and water (2 mL) bubbled the nitrogen for 30 minutes. Tetrakis(triphenylphosphine)palladium(0) (23 mg, 0.089 mmol) was added to the reaction mixture and again nitrogen was bubbled for 10 minutes. The reaction mixture was then heated to 65 °C and further maintained for lh. Reaction was monitored by TLC. The resulting solid was removed by filtration through celite bed. The filtrate was extracted with ethyl acetate (2 x 25 mL) and washed with water (15 mL) and brine solution (15 mL). The organic layer was dried over sodium sulfate and concentrated under reduced pressure to get crude compound. This crude compound was further purified by flash chromatography (Biotage) (ethyl acetate: hexane=l :20) to give title compound (660 mg, 67.7percent) m/z 548.57. The title compound was prepared by following the similar procedure as described Step-i to Step-3 of Example-i in sequential manner by taking Intermediate-3 and (3- (methoxycarbonyl)-4-methylphenyl)boronic acid.The two diastereomers were separated by chiral preparative HPLC [CHIRAL PAK ID, 250mm x 4.6,5ji; A=n-hexane IPA (90/10 percentv/v, 0.1 percentDEA), B=IPA; A:B=90/10 percentv/v;Flow = 1.0 mllmin] Isomer ?a?: tR = 6.05, Isomer ?b?: tR = 6.62; m/z, 461.9. (tR is retention time).
  • 11
  • [ 5332-24-1 ]
  • [ 1048330-10-4 ]
  • C18H15NO2 [ No CAS ]
  • 12
  • [ 1048330-10-4 ]
  • C22H23BrN2O2 [ No CAS ]
  • (R)-methyl 4-methyl-3'-(methylcarbamoyl)-5'-(2-((1-(naphthalen-1-yl)ethyl)amino)ethoxy)-[1,1'-biphenyl]-3-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
60% With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; sodium carbonate; In 1,4-dioxane; water; at 80.0℃;Inert atmosphere; Step-i: (R)-Methyl 4-methyl-3 -(methylcarbamoyl)-5 -(2-(( 1 -(naphthalen- l-yl) ethyl) amino) ethoxy)- [1,1 -biphenyl] -3-carboxylateTo a solution of (R)-3-Bromo-N-methyl-5-(2-((1-(naphthalen-1-yl) ethyl) amino) ethoxy) 10 benzamide (Intermediate-3a) (1 equivalent) in dioxane was added, (3-(methoxy carbonyl)-4-methyiphenyl) boronic acid (1.2 equivalent), Na2CO3 (2 equivalent) and water. The mixture was degassed for 15 mm and then, PdC12 (dppf) (5mol percent) was added. The reaction mixture was heated to 80°C overnight. TLC showed complete conversion of starting material so it was filtered through a pad of celite and concentrated to give the crude product that waspurified by column chromatography (10percent Ethyl acetate-Hexanes) to give the desired compound (50-60 percent).
  • 13
  • [ 1048330-10-4 ]
  • 3-formylnaphthalen-1-yl trifluoromethanesulfonate [ No CAS ]
  • 5-(3-formylnaphthalen-1-yl)-2-methylbenzoate [ No CAS ]
YieldReaction ConditionsOperation in experiment
65% With tetrakis(triphenylphosphine) palladium(0); sodium carbonate; In 1,4-dioxane; at 90.0℃; for 4.0h;Inert atmosphere; To an oven-dried round-bottomed flask was added Intermediate-2 (100 mg, 0.329 mmol), [3- (methoxycarbonyl)-4-methylphenyl] boronic acid (63.8 mg, 0.329 mmol) in anhydrous dioxane (10 ml) under N2 atmosphere. A degassed aqueous solution of sodium carbonate (105 mg, 0.986 mmol) was then added via syringe to the vigorously stined reaction mixture, followed by tetrakis(triphenylphosphine)palladium (0) (18.99 mg, 0.0 16 mmol). The reaction mixture was stirred at 90°C for 4 h. TLC showed completion of reaction. The reaction mixture was diluted with water (25 ml) and ethyl acetate (25 ml). The phases were separated and the aqueous phase was extracted with ethyl acetate (2 x 15 ml). The combined organic extract was washed with water (2 x 25 ml), brine (50 ml) and dried over anhydrous sodium sulphate, filtered and concentrated in vacuo to get 0.2g of the crude residue. The crude compound was purified by column chromatography over silica gel (100-200 mesh) with isocratic elution of 20 percent ethyl acetate in hexane to afford title compound ( mg, 65percent) as a off white solid. ?H NMR (400 MHz, CDC13-d6) oe 10.22 (s, 1H), 8.39 (s, 1H), 8.11-8.07 (m, 2H), 7.93-7.90 (m, 2H), 7.64-7.62 (m, 2H), 7.56-7.54 (m, 1H), 7.42 (d, J =7.6 Hz, 1H), 3.91 (s, 3H), 2.72 (s, 3H); MS (ES+) mlz = 304.54.
  • 14
  • [ 1048330-10-4 ]
  • 4-bromo-N-alpha-[(trans-4-[(tert-butoxycarbonyl)amino]methyl}cyclohexyl)carbonyl]-N-[4-(1H-tetrazol-5-yl)phenyl]-L-phenylalaninamide [ No CAS ]
  • methyl 4'-[(2S)-2-[(trans-4-[(tert-butoxycarbonyl)amino]methyl}cyclohexyl)carbonyl]amino}-3-oxo-3-[4-(2H-tetrazol-5-yl)phenyl]amino}propyl]-4-methylbiphenyl-3-carboxylate [ No CAS ]
YieldReaction ConditionsOperation in experiment
With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; sodium carbonate; In water; N,N-dimethyl-formamide; at 140.0℃; for 1.0h;Inert atmosphere; Example 60A Methyl 4'-[(2S)-2-[(trans-4-[(tert-butoxycarbonyl)amino]methyl}cyclohexyl)carbonyl]amino}-3-oxo-3-[4-(2H-tetrazol-5-yl)phenyl]amino}propyl]-4-methylbiphenyl-3-carboxylate Under argon, 4-bromo-N-alpha-[(trans-4-[(tert-butoxycarbonyl)amino]methyl}cyclohexyl) carbonyl]-N-[4-(2H-tetrazol-5-yl)phenyl]-L-phenylalaninamide (1.00 g, 1.60 mmol) from Example 6A, <strong>[1048330-10-4][3-(methoxycarbonyl)-4-methylphenyl]boronic acid</strong> (433 mg, 2.23 mmol) and sodium carbonate (507 mg, 4.79 mmol) were initially charged in 12 ml of DMF/water (10:2). Subsequently, 1, 1-bis(diphenylphosphino)ferrocenedichloropalladium(II) (117 mg, 0.16 mmol) was added and the mixture was stirred at 140° C. in a microwave for 1 h. At RT, the reaction mixture was then diluted with 50 ml of water, acidified with 1M hydrochloric acid and extracted twice with 70 ml each time of ethyl acetate. The combined organic phases were washed once each with water and saturated aqueous sodium chloride solution, dried over sodium sulphate and filtered, and the filtrate was concentrated. The residue obtained was taken up in ethyl acetate, and the precipitate formed was filtered off, washed with ethyl acetate and dried under high vacuum. The crude product obtained in this manner (82percent pure) was reacted further without further purification. LC-MS (Method 1): Rt=1.14 min; MS (ESIpos): m/z=696 [M+H]+.
  • 15
  • [ 1048330-10-4 ]
  • methyl 2-(bromomethyl)-5-(3-(1-((1-fluorocyclopentyl)methyl)-1H-pyrazol-4-yl)pyridin-2-yl)benzoate [ No CAS ]
  • 16
  • [ 1048330-10-4 ]
  • 2-cyclobutyl-6-(3-(1-((1-fluorocyclopentyl)methyl)-1H-pyrazol-4-yl)pyridin-2-yl)isoindolin-1-one [ No CAS ]
  • 17
  • [ 1048330-10-4 ]
  • 2-chloro-3-(1-((1-fluorocyclopentyl)methyl)-1H-pyrazol-4-yl)pyridine [ No CAS ]
  • methyl 5-(3-(1-((1-fluorocyclopentyl)methyl)-1H-pyrazol-4-yl)pyridin-2-yl)-2-methylbenzoate [ No CAS ]
YieldReaction ConditionsOperation in experiment
With potassium phosphate; dichloro[1,1'-bis(di-t-butylphosphino)ferrocene]palladium(II); In tetrahydrofuran; water; at 100.0℃; for 6.0h;Inert atmosphere; Sealed tube; Combined <strong>[1048330-10-4](3-(methoxycarbonyl)-4-methylphenyl)boronic acid</strong> (416 mg, 2.145 mmol), 2-chloro-3- (l-((l-fluorocyclopentyl)methyl)-lH-pyrazol-4-yl)pyridine (INTERMEDIATE F3, 400 mg, 1.430 mmol), and di-tert-butylphoshinoferrocene palladium dichloride (100 mg, 0.154 mmol) in a large reaction vial. Sealed the vial and inerted the atmosphere with nitrogen. Added THF (14.3 mL), and 1M aqueous tripotassium phosphate (4.3 mL, 4.3 mmol). The reaction was heated to 100°C for 6 hours. Cooled and partitioned the organic from the aqueous. Washed the organic with water (2 x 10 mL). Dried the organic over sodium sulfate, filtered and evaporated the filtrate. Purified by silica gel chromatography, eluting with 0-100percent Hex/EtOAc to give the title compound. MS(M+1): 394.
  • 18
  • [ 1048330-10-4 ]
  • 2-chloro-3-(1-isopentyl-1H-pyrazol-4-yl)pyridine [ No CAS ]
  • methyl 5-(3-(1-isopentyl-1H-pyrazol-4-yl)pyridin-2-yl)-2-methylbenzoate [ No CAS ]
YieldReaction ConditionsOperation in experiment
With dichloro[1,1?-bis[bis(1,1-dimethylethyl)phosphino]ferrocene-P,P?]palladium; In tetrahydrofuran; at 50.0℃; for 0.5h;Inert atmosphere; To a 250-mL round bottom flask was added 2-chloro-3-(1-isopentyl-1H-pyrazol-4-yl)pyridine (5.0 g, 20.02 mmol), <strong>[1048330-10-4](3-(methoxycarbonyl)-4-methylphenyl)boronic acid</strong> (7.77 g, 40.0 mmol), and 1,1?- bis(di-tert-butylphosphino)ferrocene palladium dichloride (100 mg, 0.153 mmol). To the flask was added THF (100.0 mL) and 1 M potassium phosphate (60.1 mL, 60.1 mmol). A reflux condensorwas added and the reaction was purged with nitrogen and heated to 50C for 30 minutes. The reaction was cooled and the organic layer separated. The aqueous layer was extracted with with 2 x 10 mL ethyl aceteate, and the organic layers combined and dried over sodium sulfate. The sample was filtered, concentrated under reduced pressure, and purified by flash chromatography (0-60% ethyl acetate in hexanes) to yield the title compound.
 

Historical Records

Technical Information

• Acyl Group Substitution • Baeyer-Villiger Oxidation • Barbier Coupling Reaction • Baylis-Hillman Reaction • Benzylic Oxidation • Birch Reduction • Blanc Chloromethylation • Bouveault-Blanc Reduction • Bucherer-Bergs Reaction • Catalytic Hydrogenation • Clemmensen Reduction • Complex Metal Hydride Reductions • Corey-Bakshi-Shibata (CBS) Reduction • Corey-Chaykovsky Reaction • Ester Cleavage • Fischer Indole Synthesis • Friedel-Crafts Reaction • Grignard Reaction • Henry Nitroaldol Reaction • Horner-Wadsworth-Emmons Reaction • Hydride Reductions • Hydrogenolysis of Benzyl Ether • Lawesson's Reagent • Leuckart-Wallach Reaction • McMurry Coupling • Meerwein-Ponndorf-Verley Reduction • Passerini Reaction • Paternò-Büchi Reaction • Petasis Reaction • Peterson Olefination • Pictet-Spengler Tetrahydroisoquinoline Synthesis • Preparation of Aldehydes and Ketones • Preparation of Alkylbenzene • Preparation of Amines • Prins Reaction • Reactions of Aldehydes and Ketones • Reactions of Amines • Reactions of Benzene and Substituted Benzenes • Reactions with Organometallic Reagents • Reformatsky Reaction • Robinson Annulation • Schlosser Modification of the Wittig Reaction • Schmidt Reaction • Specialized Acylation Reagents-Carbodiimides and Related Reagents • Specialized Acylation Reagents-Ketenes • Stobbe Condensation • Tebbe Olefination • Ugi Reaction • Vilsmeier-Haack Reaction • Wittig Reaction • Wolff-Kishner Reduction

Categories

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[ 1048330-10-4 ]

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