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                            The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
 
                
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Dilday, Tinslee ; Abt, Melissa ; Ramos-Solis, Nicole ; Dayal, Neetu ; Larocque, Elizabeth ; Oblak, Adrian L. , et al.
Abstract: Human epidermal growth factor receptor 2 (HER2)-targeted agents have proven to be effective, however, the development of resistance to these agents has become an obstacle in treating HER2+ breast cancer. Evidence implicates HUNK as an anti-cancer target for primary and resistant HER2+ breast cancers. In this study, a selective inhibitor of HUNK is characterized alongside a phosphorylation event in a downstream substrate of HUNK as a marker for HUNK activity in HER2+ breast cancer. Rubicon has been established as a substrate of HUNK that is phosphorylated at serine (S) 92. Findings indicate that HUNK-mediated phosphorylation of Rubicon at S92 promotes both autophagy and tumorigenesis in HER2/neu+ breast cancer. HUNK inhibition prevents Rubicon S92 phosphorylation in HER2/neu+ breast cancer models and inhibits tumorigenesis. This study characterizes a downstream phosphorylation event as a measure of HUNK activity and identifies a selective HUNK inhibitor that has meaningful efficacy toward HER2+ breast cancer.
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                        | CAS No. : | 10601-99-7 | 
| Formula : | C9H6O2 | 
| M.W : | 146.14 | 
| SMILES Code : | O=C(O)C1=CC=CC(C#C)=C1 | 
| MDL No. : | MFCD06658448 | 
| InChI Key : | PHPIMLZTBYCDSX-UHFFFAOYSA-N | 
| Pubchem ID : | 15897047 | 
| GHS Pictogram: |   | 
| Signal Word: | Warning | 
| Hazard Statements: | H302-H317-H319 | 
| Precautionary Statements: | P280-P305+P351+P338 | 
| Num. heavy atoms | 11 | 
| Num. arom. heavy atoms | 6 | 
| Fraction Csp3 | 0.0 | 
| Num. rotatable bonds | 1 | 
| Num. H-bond acceptors | 2.0 | 
| Num. H-bond donors | 1.0 | 
| Molar Refractivity | 41.34 | 
| TPSA ? Topological Polar Surface Area: Calculated from  | 37.3 Ų | 
| Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from  | 0.93 | 
| Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by  | 2.25 | 
| Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from  | 1.45 | 
| Log Po/w (MLOGP)? MLOGP: Topological method implemented from  | 2.16 | 
| Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by  | 1.84 | 
| Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions | 1.73 | 
| Log S (ESOL):? ESOL: Topological method implemented from  | -2.5 | 
| Solubility | 0.461 mg/ml ; 0.00315 mol/l | 
| Class? Solubility class: Log S scale  | Soluble | 
| Log S (Ali)? Ali: Topological method implemented from  | -2.67 | 
| Solubility | 0.313 mg/ml ; 0.00214 mol/l | 
| Class? Solubility class: Log S scale  | Soluble | 
| Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by  | -1.83 | 
| Solubility | 2.15 mg/ml ; 0.0147 mol/l | 
| Class? Solubility class: Log S scale  | Soluble | 
| GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg | High | 
| BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg | Yes | 
| P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set)  | No | 
| CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) | No | 
| CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) | No | 
| CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) | No | 
| CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) | No | 
| CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) | No | 
| Log Kp (skin permeation)? Skin permeation: QSPR model implemented from  | -5.59 cm/s | 
| Lipinski? Lipinski (Pfizer) filter: implemented from  | 0.0 | 
| Ghose? Ghose filter: implemented from  | None | 
| Veber? Veber (GSK) filter: implemented from  | 0.0 | 
| Egan? Egan (Pharmacia) filter: implemented from  | 0.0 | 
| Muegge? Muegge (Bayer) filter: implemented from  | 1.0 | 
| Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat  | 0.56 | 
| PAINS? Pan Assay Interference Structures: implemented from  | 0.0 alert | 
| Brenk? Structural Alert: implemented from  | 1.0 alert: heavy_metal | 
| Leadlikeness? Leadlikeness: implemented from  | No; 1 violation:MW<1.0 | 
| Synthetic accessibility? Synthetic accessibility score:  from 1 (very easy) to 10 (very difficult) | 1.65 | 
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

 [ 10601-99-7 ]
                                                    
                                                    [ 10601-99-7 ]

 [ 10601-99-7 ]
                                                    
                                                    [ 10601-99-7 ]

 [ 1066-54-2 ]
                                                    
                                                    [ 1066-54-2 ]
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 78% | With (benzotriazo-1-yloxy)tris(dimethylamino)phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine; In N,N-dimethyl-formamide; at 50℃; for 3h; | Example 478(S)-5-[(3-[(l,3-dimethyl-lH-pyrazol-5-yl)amino]carbonyl}phenyl)ethynyl]-N- [methyl(oxido)phenyl-lambda4-sulfanylidene]nicotinamideStep 1 N-(2,5-Dimethyl-2H-pyrazol-3-yl)-3-ethynyl-benzamide 3-Ethynylbenzoic acid (0.1 g, 0.685 mmol) was added to a dry 50 mL round bottom flask and dissolved in DMF (6.85 mL). To the resulting solution was added l,3-dimethyl-lH-pyrazol-5- amine (0.076 g, 0.685 mmol), followed by BOP (0.393 g, 0.890 mmol), and 0.238 mL of DIPEA (1.37 mmol). This reaction mixture was heated to 50 0C for 3 h. After allowing the reaction to cool to room temperature it was taken up in EtOAc (15 mL) and extracted with brine (3 x 15 mL). The EtOAc layer was then washed with saturated aqueous NaHCtheta3 (2 x 15 mL). The organics were dried over anhydrous Na2SO^8), filtered and concentrated in vacuo. The crude residue was purified via column chromatography (silica gel, gradient eluant mixture of EtOAc in Hexanes: 0% to 100% EtOAc) affording N-(l,3-dimethyl-lH-pyrazol-5-yl)-3-ethynylbenzamide (0.128 g, | 
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| With thionyl chloride; In Ar; | Reference Example 4 (Synthesis of 3-ethynyl-N,N-diethylbenzamide) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. | |
| With thionyl chloride; In Ar; | Reference Example 5 (Synthesis of 3-ethynyl-N,N-diphenylbenzamide) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. | |
| With thionyl chloride; In Ar; | Reference Example 6 (Synthesis of ethyl 3-ethynylbenzoate) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. | 
| With thionyl chloride; In Ar; | Reference Example 7 (Synthesis of phenyl 3-ethynylbenzoate) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. | |
| With thionyl chloride; In Ar; | Reference Example 8 (Synthesis of S-methyl 3-ethynyl-thiobenzoate) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. To the m-ethynylbenzoyl chloride obtained was added 7 ml of dichloromethane and the resultant mixture was ice-cooled. | |
| With thionyl chloride; In Ar; | Reference Example 9 (Synthesis of S-phenyl 3-ethynyl-thiobenzoate) Air in a 20 ml Schlenk tube was replaced by Ar gas and 1.02 g (7 mmol) of <strong>[10601-99-7]m-ethynylbenzoic acid</strong> and 5 g (42 mmol) of thionyl chloride were added to the tube and the mixture was stirred at 50C for 2 hours and then excess thionyl chloride was removed by distillation under reduced pressure to obtain m-ethynylbenzoyl chloride. To the m-ethynylbenzoyl chloride obtained was added 7 ml of THF and the resultant mixture was ice-cooled. | 

| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 33% | With triphenyl-arsane; triethylamine;tris-(dibenzylideneacetone)dipalladium(0); In tetrahydrofuran; for 24h;Inert atmosphere of nitrogen; Reflux; | A mixture of porphyrin 27 (24 mg), <strong>[10601-99-7]3-ethynylbenzoic acid</strong> (29.2 mg) in dry THF (10 mL) and Et3N (2 mL) was deoxygenated with nitrogen for 10 minutes, followed by adding Pd2(dba)3 (9.2 mg) and AsPh3 (24.5 mg). The mixture was refluxed under nitrogen for 24 hours, and then purified according to a method similar to that for ZnP-11 to obtain photosensitizer dye 12 (ZnP-12, 8.3 mg, 33%). | 
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| With sodium azide; sodium L-ascorbate; triethylamine;copper(l) iodide; N,N`-dimethylethylenediamine; In water; dimethyl sulfoxide; at 20℃; for 2h; | Example 5a: 3-[l-(4-isopropylphenyl)-l/f-l,2,3-triazol-4-yl]benzoic acid (5-3); [000233] A mixture of l-iodo-4-isopropylbenzene (5-1) (123 mg, 0.5 mmol), sodium azide (34 mg, 0.52 mmol), <strong>[10601-99-7]3-ethynylbenzoic acid</strong> (5-2) (73 mg, 0.5 mmol), CuI (10 mg), MeNHCH2CH2NHMe (11 muL), Et3N (51 mg, 0.5 mmol), sodium ascorbate (10 mg), DMSO-H2O (v/v 5: l, 1.5 mL) is stirred at room temperature for 2 hours followed by the addition of 2 mL of IM HCl. The resulting mixture is poured into ethyl acetate (100 mL), washed with water (10 mL) and brine (10 mL), dried over Na2SO4, filtered and evaporated. The residue is purified on slilica gel (0-100% ethyl acetate in hexane) to give 3-[l-(4-isopropylphenyl)-l/f- l,2,3-triazol-4-yl]benzoic acid (5-3) as a white solid. 1H NMR (DMSO-d6) delta (ppm) 9.42 (s, IH), 8.53 (dd, J=1.6, 1.6 Hz, IH), 8.20 (ddd, J=8.0, 1.6, 1.2 Hz, IH), 7.95 (ddd, J=8.0, 1.6, 1.2 Hz, IH), 7.89 (dm, J=8.8 Hz, 2H), 7.64 (dd, J=8.4, 8.0 Hz, IH), 7.51 (dm, J=8.8 Hz, 2H), 3.00 (septet, J=6.8 Hz, IH), 1.26 (d, J=6.8 Hz, 6H). HPLC-MS calculated for Ci8H17N3O2 (M +H+) 308.13, found 308.10. | 
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 99% | With sodium hydroxide; In methanol; water; at 20℃; for 7h;Cooling with ice; | Obtained in Step 2 3-[(trimethylsilyl)ethynyl]benzoic acid methyl ester(105) (2.42 g) was dissolved in methanol (30 mL), under ice cooling 2N aqueous sodium hydroxide solution (10.4 mL) was added, 7 hours and stirred at room temperature. The reaction mixture was acidified (pH 3 ~ 4) with 2N hydrochloric acid, and concentrated under reduced pressure. The residue Water (100 mL) was added, followed by extraction with ethyl acetate (100mL). The organic layer was washed with saturated brine (100 mL), dried over anhydrous sodium sulfate, and filtered. Thefiltrate was concentrated under reduced pressure to give 3-ethynylbenzoic acid (106) and (1.50 g, 99% yield) as a white solid. | 
| 0.26 g | With lithium hydroxide; In tetrahydrofuran; water; at 50℃; | Preparation 18Synthesis of 3-ethynylbenzoic acid.Place methyl 3-(2-trimethylsilylethynyl)benzoate (0.399 g, 1.55 mmoles) and tetrahydrofuran (3.68 mL) in a round bottom flask. Add lithium hydroxide (0.162 g, 3.86 mmoles) and water (3.68 mL) and heat at 50C. Quench the reaction with 1.3 mL 5N hydrochloric acid and extract three times with ethyl acetate. Wash one time with brine and dry over sodium sulfate, filter and concentrate under reduced pressure to give the title compound (0.26g, >100%).]H NMR (400 MHz, DMSO-d6) ppm: 4.39 (s, 3H), 7.50 (m, 2H), 7.70 (m, 1H), 7.94 (m, 1H) 13.22 (s, 1H). | 

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