Structure of Cbz-Val-OH
CAS No.: 1142-20-7
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Synonyms: (S)-2-(Benzyloxycarbonylamino)propanoic acid; L-Alanine, N-carboxy-, N-benzyl ester (6CI,7CI); N-[(Benzyloxy)carbonyl]-L-alanine
4.5
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| CAS No. : | 1142-20-7 |
| Formula : | C11H13NO4 |
| M.W : | 223.23 |
| SMILES Code : | [C@@H](NC(OCC1=CC=CC=C1)=O)(C(=O)O)C |
| Synonyms : |
(S)-2-(Benzyloxycarbonylamino)propanoic acid; L-Alanine, N-carboxy-, N-benzyl ester (6CI,7CI); N-[(Benzyloxy)carbonyl]-L-alanine
|
| English Name : | ((Benzyloxy)carbonyl)-L-alanine |
| MDL No. : | MFCD00002640 |
| InChI Key : | TYRGLVWXHJRKMT-QMMMGPOBSA-N |
| Pubchem ID : | 736104 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 73.1% | N-benzyloxycarbonyl-L-alanine (100 g, 0.45 mol) was dissolved in a dried N,N-dimethylformamide (3 L), and 1-hydroxylbenzotriazole (72.6 g, 0.54 mol) and 1-ethyl-(3-dimethylaminopropyl) carbodiimide hydrochloride (103.3 g, 0.54 mol) were added while stirring. After stirring for reaction for 1 hour, the mixture was subjected to an ice both until the temperature reached 0 C. L-alanine methyl ester (46.2 g, 0.45 mol) and N,N-diisopropyl ethylamine (173.8 g, 1.34 mol) dissolved in an N,N-dimethylformamide (1 L) solution were dropped into the mixture. After dropping, the mixture was stirred under ambient temperature for 10 hours and the solvents were removed by evaporation under reduced pressure. The crude product was dissolved in dichloromethane (2 L) and washed successively with saturated ammonia chloride solution, water and saturated sodium chloride solution. The organic phase was dried with anhydrous sodium sulfate and the solvents were removed by evaporation under reduced pressure. The crude product was re-crystallized by ethyl acetate/petroleum ether to obtain a pure product, which was a white solid I, i.e., Cbz-L-Ala-L-Ala-OMe (101 g; Yield, 73.1%). | |
| 73.1% | [0082] N-benzyloxycarbonyl-LAla (100g, 0.45mol) were dissolved in N,N-dimethylformamide (3L). 1-hydroxylbenzotriazole (HOBt, 72.6g, 0.54mol) and 1-ethyl-(3-dimethylaminopropyl) carbodiimide hydrochloride (EDC, 103.3g, 0.54mol) were added when stirring. After reacting for 1 hour under stirring, the mixture was cooled to 0C in an ice bath and L-Ala methyl ester (46.2g, 0.45mol) and N,N-diisopropylethylamine (173.8g, 1.34mol) in the N,N-dimethylformamide solution (1L) was dropped into the mixture. After dropping, the mixture was stirred under ambient temperature for 10 hours. The solvents were removed by evaporation under reduced pressure. The crude product was dissolved in dichloromethane (2L) and washed subsequently by saturated ammonium chloride solution, water and saturated sodium chloride solution. The organic phase was dried by anhydrous sodium sulphate. After removing the solvents by evaporation under reduced pressure, the crude product was recrystallized to obtain a white solid I (101g, Yield 73.1%). | |
| 73.1% | N-benzyloxycarbonyl-L-alanine (100 g, 0.45 mol) was dissolved in a dried N,N-dimethylformamide (3 L), and 1-hydroxylbenzotriazole (72.6 g, 0.54 mol) and 1-ethyl-(3-dimethylaminopropyl) carbodiimide hydrochloride (103.3 g, 0.54 mol) were added while stirring. After stirring for reaction for 1 hour, the mixture was subjected to an ice bath until the temperature reached 0 C. L-alanine methyl ester (46.2 g, 0.45 mol) and N,N-diisopropyl ethylamine (173.8 g, 1.34 mol) dissolved in an N,N-dimethylformamide (1 L) solution were dropped into the mixture. After dropping, the mixture was stirred under ambient temperature for 10 hours and the solvents were removed by evaporation under reduced pressure. The crude product was dissolved in dichloromethane (2 L) and washed successively with saturated ammonia chloride solution, water and saturated sodium chloride solution. The organic phase was dried with anhydrous sodium sulfate and the solvents were removed by evaporation under reduced pressure. The crude product was re-crystallized by ethyl acetate/petroleum ether to obtain a pure product, which was a white solid I, i.e., Cbz-L-Ala-L-Ala-OMe (101 g; Yield, 73.1%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| (i) ClCO2Et, Et3N, (ii) /BRN= 3588822/, aq. Et3N; Multistep reaction; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 75.6% | Stage #1: N-Cbz-Ala With benzotriazol-1-ol; dicyclohexyl-carbodiimide In dichloromethane at 0 - 20℃; Stage #2: methylamine In dichloromethane at 20℃; for 12h; | 4.1.10. General procedure for preparation of compounds 10a,b,c,d,e,h,j,k General procedure: This procedure is illustrated for compound 10a. To a stirred solution of Z-glycine (250 mg, 1.2 mmol) in dichloromethane at 0 °C, dicyclohexylcarbodiimide (DCC) (296 mg, 1.44 mmol, 1.2 equiv) and hydroxybenzotriazole (HOBt) (195 mg, 1.44 mmol, 1.2 equiv) were added. The reaction mixture was maintained at 0 °C for 1 h, and then it was allowed to warm up to room temperature. The methylamine (112 mg, 3.6 mmol, 3 equiv) was added, and the reaction mixture was stirred for 12 h. The DCU was filtered, and the organic layer was washed with 5% citric acid solution (2×), saturated aqueous sodium bicarbonate (2×), and brine, dried and concentrated in vacuo, to afford a clear oil. The obtained residue was purified by flash column chromatography (EtOAc/hexane, 8:2), affording the title compound as a white solid. Yield 64%. |
| (i) Et2O, (ii) AcOH; Multistep reaction; | ||
| With N-ethylmorpholine;; isobutyl chloroformate 1.) THF, -15 deg C, 5 min; 2.) THF/EtOH, -15 deg C to rt., 20 min; Yield given. Multistep reaction; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 100% | With sodium hydride In tetrahydrofuran at 0 - 20℃; for 7h; Inert atmosphere; | Synthesis of 4-2 To a solution of 4-1 (500 mg, 2.24 mmol) and NaH (270 mg, 6.72 mmol) in dry THF (5.0 mL) was added CH3I(791 μL, 12.7 mmol) at 0 and the mixture was stirred for 7 hr at room temperature. The reaction wasquenched by addition of water and the aqueous layer was washed with ethyl acetate. After adjustment of pHto 2 by 1N HCl aq., the product was extracted with ethyl acetate. The solvent was removed by evaporation togive 4-2 (540 mg, quant) as yellow oil. |
| 91% | With sodium hydride In tetrahydrofuran for 24h; Ambient temperature; | |
| 90% | With sodium hydride In tetrahydrofuran at 60℃; for 12h; |
| (i) NaH, THF, DMF, (ii) /BRN= 969135/, (iii) aq. NaOH; Multistep reaction; | ||
| (i) NaH, THF, (ii) /BRN= 969135/; Multistep reaction; | ||
| (i) NaH, THF, DMF, (ii) NaOH, MeOH; Multistep reaction; |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | With N-[2-(4-sulphonatephenylamino)-4-methoxy-1,3,5-triazin-6-yl]-4-methylmorpholinium inner salt; sodium hydrogencarbonate; In water; for 5h;Product distribution / selectivity; | Example 19. A round-bottomed flask was charged with Z-Ala-OH (0.223 g, 0.001 mol), H-Ala-OMe x HCl (0.140 g, 0.001 mol), SPMT x 5H2O (0.471 g, 0.001 mol) and NaHCO3 (0.168 g, 0.002 mol). Water (10 ml) was added to the flask and the mixture was stirred using a magnetic stirrer. During the reaction, a formation of white precipitate was observed. After 5 hours, the precipitate was filtered off and dried in the air. Z-Ala-Ala-OMe (0.278 g, 90% yield) was obtained in the form of a white powder, having the m.p. of 93-94C (lit. 106-108C). The results of NMR analysis of the obtained compound are as follows: 1H NMR (acetone-d6) δ = 1.341 (d, J = 7 Hz, CH3, 3H); δ = 1.380 (d, J = 7 Hz, CH3, 3H); 3.673 (s, CH3, 3H); 4.240 (dp, J = 7.25 Hz, J = 2 Hz, CH, 1H); 4.435 (dp, J = 7.5 Hz, J = 1 Hz, CH, 1H); 5.077 (d, J = 1.5 Hz, CH2, 2H); 6.482 (m, NH, 1H); 7.267-7.417 (m, CArH, 5H); 7.536 (m, NH, 1H) [ppm]. |
| 52% | With 4-methyl-morpholine; isobutyl chloroformate; In tetrahydrofuran; at 0 - 20℃; | General procedure: To a solution of ((benzyloxy)carbonyl)-L-phenylalanine (0.72 g, 2.4 mmol, 1.0 eq) andN-methylmorpholine (0.97 g, 9.6 mmol, 4.0 eq) in anhydrous THF was added isobutylchloroformate (0.49 g, 3.6 mmol, 1.5 eq) at 0 C. The methyl L-alaninate hydrochloride(0.33 g, 2.4 mmol, 1.0 eq) was then added and the reaction was allowed to warm slowly toroom temperature overnight. The next day the reaction mixture was diluted with EtOAc(25 mL) and washed in succession with 1.0 M HCl (50 mL), 5% sodium carbonate solution(50 mL), brine (50 mL), then dried over sodium sulfate before filtering and concentrating invacuo. The residue was recrystallized in a DCM:Hexanes solution and filtered, yielding12g as a white crystalline solid (0.61 g, 1.6 mmol, 66%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 88% | With (benzotriazo-1-yloxy)tris(dimethylamino)phosphonium hexafluorophosphate; N-ethyl-N,N-diisopropylamine In dichloromethane for 0.5h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With pyridine In acetonitrile for 5h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With triethylamine; dicyclohexyl-carbodiimide In dichloromethane at 0℃; for 4h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With 4-methyl-morpholine In acetonitrile Ambient temperature; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| In nitromethane for 0.0833333h; Ambient temperature; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 75% | With chloroformic acid ethyl ester; triethylamine In tetrahydrofuran |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 100% | Stage #1: N-Cbz-Ala With 4-methyl-morpholine; isobutyl chloroformate In tetrahydrofuran at -15℃; for 0.25h; Stage #2: With sodium tetrahydroborate In tetrahydrofuran; water at -15℃; for 1h; | |
| 90% | Stage #1: N-Cbz-Ala With 2,4,6-tripropyl-1,3,5,2,4,6-trioxatriphosphinane-2,4,6-trioxide; N-ethyl-N,N-diisopropylamine In ethyl acetate at 0℃; for 0.166667h; Stage #2: With sodium tetrahydroborate In water; ethyl acetate at 0℃; for 0.366667h; | General procedure for the reduction of carboxylic acids to alcohols using T3P-NaBH4: General procedure: To a solution of carboxylic acid (10 mmol) in THF (10 mL), DIPEA (11 mmol, 1.42 mL) and 50% T3P in EtOAc (20 mmol, 6.36 mL) were added at 0 °C and the solution was stirred for about 10 min. Then aqueous solution of NaBH4 (10 mmol, 388 mg in 0.3 mL of H2O) was added to the reaction mixture at the same temperature and the reaction was allowed to stir till the completion of the reaction as indicated by TLC. After the completion of the reaction, the solvent was evaporated and the crude alcohol was extracted into EtOAc and the organic phase was washed with 5% citric acid (10 mL × 2), 5% Na2CO3 (10 mL × 2), water, and brine solution. The product was isolated after the evaporation of solvent under reduced pressure and dried over anhydrous Na2SO4. |
| 88% | Stage #1: N-Cbz-Ala With 4-methyl-morpholine; isobutyl chloroformate In 1,2-dimethoxyethane at -15℃; Stage #2: With sodium tetrahydroborate In 1,2-dimethoxyethane; water at 15℃; |
| With lithium aluminium tetrahydride In tetrahydrofuran at 0 - 25℃; | ||
| Stage #1: N-Cbz-Ala With triethylamine; isobutyl chloroformate In tetrahydrofuran Stage #2: With sodium tetrahydroborate In water | ||
| Multi-step reaction with 2 steps 1: 95 percent / KHCO3 / dimethylformamide / 4 h / Ambient temperature 2: 95 percent / LiBH4 / tetrahydrofuran; ethanol | ||
| Multi-step reaction with 2 steps 1: 2.33 g / diethyl ether 2: 67 percent / lithium borohydride / tetrahydrofuran / 1 h / Ambient temperature | ||
| Multi-step reaction with 2 steps 1: N-methylmorpholine / tetrahydrofuran / -10 °C 2: NaBH4/MeOH / 0.33 h / 0 °C | ||
| Multi-step reaction with 2 steps 1: diethyl ether 2: LiBH4 / tetrahydrofuran | ||
| Stage #1: N-Cbz-Ala With 4-methyl-morpholine; isobutyl chloroformate In 1,2-dimethoxyethane at -15 - 20℃; Inert atmosphere; Stage #2: With sodium tetrahydroborate In 1,2-dimethoxyethane; water at -15℃; for 1h; Inert atmosphere; | ||
| Multi-step reaction with 2 steps 1: 4-methyl-morpholine / 1,2-dimethoxyethane / 20 °C 2: sodium tetrahydroborate; water / -15 °C | ||
| Multi-step reaction with 2 steps 1: 4-methyl-morpholine / tetrahydrofuran / 0.25 h / -15 °C / Inert atmosphere 2: sodium tetrahydroborate / methanol; water / 0.25 h / -15 °C / Inert atmosphere | ||
| Multi-step reaction with 2 steps 1: dicyclohexyl-carbodiimide / tetrahydrofuran / 1 h / 0 °C 2: sodium tetrahydroborate / water; tetrahydrofuran / 0.08 h / 0 °C | ||
| Multi-step reaction with 2 steps 1: 4-methyl-morpholine / tetrahydrofuran / -15 °C 2: sodium tetrahydroborate | ||
| Multi-step reaction with 3 steps 1: dichloromethane / 1 h / 0 °C / Schlenk technique; Inert atmosphere 2: diisobutylaluminium hydride / dichloromethane / 0.75 h / -78 °C / Schlenk technique; Inert atmosphere 3: sodium tetrahydroborate / methanol / 0.33 h / 0 °C / Inert atmosphere; Schlenk technique | ||
| Stage #1: N-Cbz-Ala With 4-methyl-morpholine; chloroformic acid ethyl ester In tetrahydrofuran at -15℃; for 0.25h; Stage #2: With sodium tetrahydroborate In tetrahydrofuran for 0.5h; Stage #3: With water In tetrahydrofuran for 0.25h; | ||
| Stage #1: N-Cbz-Ala With N-ethyl-N,N-diisopropylamine; isobutyl chloroformate Stage #2: With sodium tetrahydroborate; water | ||
| With methanol; sodium tetrahydroborate; methyl chloroformate In tetrahydrofuran at -15℃; |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 98% | With tetrabutyl ammonium fluoride In N,N-dimethyl-formamide Ambient temperature; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 95% | With jones' reagent In acetone at 0℃; for 3h; | |
| Stage #1: (S)-(-)-N-(benzyloxycarbonyl)alaninol With 2,2,6,6-Tetramethyl-1-piperidinyloxy free radical; water; sodium bromide; sodium hydroxide In 1,2-dichloro-ethane; acetone at -20 - 20℃; Stage #2: With sodium hypochlorite In 1,2-dichloro-ethane; acetone at 20℃; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With dicyclohexyl-carbodiimide In dichloromethane; acetone |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 71.9% | With boron trifluoride diethyl etherate In diethyl ether at -15℃; for 96h; | |
| 60% | With boron trifluoride diethyl etherate In diethyl ether at -78 - 20℃; for 120h; | |
| 60% | With boron trifluoride diethyl etherate In diethyl ether at -78 - 20℃; Inert atmosphere; | 1 4.1.1 (2S,4S)-Benzyl-4-methyl-5-oxo-2-phenyloxazolidine-carboxylate 1 Properly dried Z-(S)-alanine (22.3 g, 100 mmol) and benzaldehyde dimethyl acetal (14.4 mL, 95.9 mmol) in diethyl ether (500 mL) were cooled to -78 °C followed by the dropwise addition of BF3·Et2O (60.2 mL, 489 mmol) under a nitrogen atmosphere. The reaction mixture was then allowed to warm to room temperature and stirred until completion of the reaction as monitored by TLC. The reaction mixture was treated with saturated aqueous NaHCO3 at 0 °C, initially in small portions until strong bubbling ceased, and then the mixture was extracted with Et2O (3 * 150 mL). The combined organic phase was washed with brine and dried over anhydrous sodium sulfate. The solvent was removed under vacuum and the predominant cis-isomer was obtained from the crude mixture by silica gel column chromatography using ethyl acetate in hexane (1:4) as the eluent. The compound was further crystallised from diethyl ether/hexane to yield compound 1 (18.66 g, 60% yield) as white crystalline solid: mp 53-54 °C; 1H NMR (400 MHz, CDCl3) δ = 1.56 (d, J = 6.9 Hz, 3H), 4.45 (q, J = 6.9 Hz, 1H), 5.11-5.21 (m, 2H), 6.64 (s, 1H), 7.25-7.40 (m, 10H); 13C NMR (100 MHz, CDCl3) δ = 18.2, 52.2, 67.9, 89.1, 126.3, 126.6, 128.1, 128.5, 128.6, 128.8, 129.8, 135.4, 136.9, 153.4, 172.5; FTIR (KBr): ν = 3352, 1800, 1717, 763 cm-1; HRMS (ESI-TOF) calculated for [C18H17NO4+H]+ 312.1230, found 312.1229. |
| 56% | With thionyl chloride; zinc(II) chloride In tetrahydrofuran at 0℃; for 4h; | |
| 48% | With thionyl chloride; zinc(II) chloride In tetrahydrofuran for 4h; | |
| 47.04% | With boron trifluoride diethyl etherate In diethyl ether at -78 - 25℃; for 24h; | 30.1 Step 1: A solution of (2S)-2-(benzyloxycarbonylamino)propanoic acid (5 g, 22.40 mmol, 1 eq), dimethoxymethylbenzene (3.41 g, 22.40 mmol, 3.38 mL, 1 eq) in Et2O (35.30 g, 476.26 mmol, 50.00 mL, 21.26 eq) was added BF3.Et2O (19.07 g, 134.39 mmol, 16.59 mL, 6 eq) at - 78 °C. The mixture was warmed to 25 °C and stirred at 25 °C for 24 hr under N2atmosphere. The reaction mixture was slowly added to cooled saturated aqueous NaHCO3(1000 mL) and stirred for 30 min, then the organic layers was washed H2O, dried with MgSO4. The solvent was removed in vacuo to get a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=20/1 to 10/1) and recrystallization with (Et2O: PE=1:2). The mixture was filtered and the filter cake was concentrated under reduced pressure to give compound benzyl (2S,4S)-4-methyl-5-oxo-2-phenyl-oxazolidine- 3-carboxylate (12 g, 37.77 mmol, 47.04% yield, 98% purity) as colorless crystals. |
| 47.04% | With boron trifluoride diethyl etherate In diethyl ether at -78 - 25℃; for 24h; | 30.1 Step 1: A solution of (2S)-2-(benzyloxycarbonylamino)propanoic acid (5 g, 22.40 mmol, 1 eq), dimethoxymethylbenzene (3.41 g, 22.40 mmol, 3.38 mL, 1 eq) in Et2O (35.30 g, 476.26 mmol, 50.00 mL, 21.26 eq) was added BF3.Et2O (19.07 g, 134.39 mmol, 16.59 mL, 6 eq) at - 78 °C. The mixture was warmed to 25 °C and stirred at 25 °C for 24 hr under N2atmosphere. The reaction mixture was slowly added to cooled saturated aqueous NaHCO3(1000 mL) and stirred for 30 min, then the organic layers was washed H2O, dried with MgSO4. The solvent was removed in vacuo to get a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=20/1 to 10/1) and recrystallization with (Et2O: PE=1:2). The mixture was filtered and the filter cake was concentrated under reduced pressure to give compound benzyl (2S,4S)-4-methyl-5-oxo-2-phenyl-oxazolidine- 3-carboxylate (12 g, 37.77 mmol, 47.04% yield, 98% purity) as colorless crystals. |
| 46% | With thionyl chloride; zinc(II) chloride In tetrahydrofuran at -15 - 0℃; for 4h; Inert atmosphere; | 9.1 Example 9 (1): 400 g of Cbz-L-alanine is dissolved in 2 L of tetrahydrofuran,Add 314 g of benzaldehyde dimethyl acetal and pass a nitrogen replacement system.The ice salt bath was cooled to -15 ° C, and 213.4 g of thionyl chloride was added dropwise.The control temperature is lower than 0 ° C, and the mixture is stirred until the temperature reaches -15 ° C.244g of anhydrous zinc chloride was added in batches, and the temperature was controlled below 0 °C.After stirring for 4 hours, 2 L of water was added to quench the reaction.Then extracted with 1.2 L of ethyl acetate.The organic phase is washed sequentially with water and a saturated sodium bicarbonate solution until neutral.Dry over anhydrous sodium sulfate, concentrate and recrystallize with 600 mL of isopropyl ether and 400 mL of petroleum ether.Filtration and drying gave 257 g of intermediate 4, and the hydrogen spectrum is shown in Figure 4.White solid,The yield was 46%. |
| 43% | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; for 0.166667h; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; for 4h; | 1 Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a mixture of ((benzyloxy)carbonyl)-L-alanine (25 g, 111.99 mmol) and (dimethoxymethyl)benzene (71.38 mL, 115.35 mmol) in THF (180 mL) was added SOCl2 (8.94 g, 123.19 mmol) in one portion at 0 °C. The mixture was stirred for 10 min before ZnCl2 (5.77 mL, 123.26 mmol) was added to the solution, then the mixture was stirred at 0 °C for 4 h. The reaction mixture was quenched by dropwise addition of cold H2O and adjusted to pH = 5 with sat. NaHCO3, then extracted with EtOAc (2 x 100 mL). The organic phase was washed with a aq. sat. NaHCO3 (30 mL) and brine (30 mL), dried over Na2SO4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (1→10% EtOAc/pet. ether) to afford product (15 g, 43% yield). |
| 43% | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; for 0.166667h; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; for 4h; | Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a mixture of ((benzyloxy)carbonyl)-L-alanine (25 g, 111.99 mmol) and (dimethoxymethyl)benzene (71.38 mL, 115.35 mmol) in THF (180 mL) was added SOCl2 (8.94 g, 123.19 mmol) in one portion at 0° C. The mixture was stirred for 10 min before ZnCl2 (5.77 mL, 123.26 mmol) was added to the solution, then the mixture was stirred at 0° C. for 4 h. The reaction mixture was quenched by dropwise addition of cold H2O and adjusted to pH=5 with sat. NaHCO3, then extracted with EtOAc (2*100 mL). The organic phase was washed with a aq. sat. NaHCO3(30 mL) and brine (30 mL), dried over Na2SO4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (1→10% EtOAc/pet. ether) to afford product (15 g, 43% yield). |
| With boron trifluoride diethyl etherate In diethyl ether at -15℃; for 96h; | ||
| With thionyl chloride; zinc(II) chloride In tetrahydrofuran at 0℃; for 0.333333h; | ||
| With thionyl chloride; zinc(II) chloride In tetrahydrofuran at 0℃; | ||
| Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; for 0.5h; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; for 3h; | 23.2 Step 2 Step 2. Thionyl chloride (3.27 mL, 44.8 mmol) was added to the stirring mixture of CBz-L-alanine 23-2 (10.0 g, 44.8 mmol) and benzaldehyde dimelthyl acetal (6.73 mml, 44.8 mmol) in dry THF at 0 °C. After it was stirred for 30 min, anhydrous ZnCl2 (6.11 g, 44.8 mmol) was added. The mixture was stirred at 0 °C for 3 h and antoher 0.2 equiv. of ZnCl2/SOCl2 was then added. The mixture was then quenched with water (below 10°C) and extracted with MTBE (150 mL x 3). The organic layer was dried over Na2S04 and purified by column on silica gel to give compound 23-4. NMR (400 MHz, CDC13) δ 7.41-7.39 (m, 10 H), 6.65 (s, 1 H), 5.18-5.16 (m, 2 H), 4.47-4.52 (m, 1 H), 1.63-1.57 (m, 3 H). | |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL ) was added SOCb (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCL (1.15 mL , 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H2O, adjusted to pH 5 with sat. NaHCC>3, then extracted with EtOAc (2 x 30 mL ). The organic phase was washed with a sat. aq. NaHCC>3 (30 mL ) and brine (30 mL ), dried with anhydrous Na2S O4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0→20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | Step 1. Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL) was added SOCI2 (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCL (1 .15 mL, 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H2O, adjusted to pH 5 with sat. NaHCO3, then extracted with EtOAc (2 x 30 mL). The organic phase was washed with a sat. aq. NaHCO3 (30 mL) and brine (30 mL), dried with anhydrous Na2SO4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0→20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL ) was added SOCb (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCL (1.15 mL , 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H2O, adjusted to pH 5 with sat. NaHCC>3, then extracted with EtOAc (2 x 30 mL ). The organic phase was washed with a sat. aq. NaHCC>3 (30 mL ) and brine (30 mL ), dried with anhydrous Na2S O4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0→20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | Step 1. Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL) was added SOCI2 (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCL (1 .15 mL, 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H2O, adjusted to pH 5 with sat. NaHCO3, then extracted with EtOAc (2 x 30 mL). The organic phase was washed with a sat. aq. NaHCO3 (30 mL) and brine (30 mL), dried with anhydrous Na2SO4, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0→20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | 14.1 Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL) was added SOCI (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCh (1 .15 mL, 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H O, adjusted to pH 5 with sat. NaHCC, then extracted with EtOAc (2 x 30 mL). The organic phase was washed with a sat. aq. NaHC03 (30 mL) and brine (30 mL), dried with anhydrous Na2S04, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0 20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |
| 53 % | Stage #1: benzaldehyde dimethyl acetal; N-Cbz-Ala With thionyl chloride In tetrahydrofuran at 0℃; Stage #2: With zinc(II) chloride In tetrahydrofuran at 0℃; | 14.1 Step 1: Synthesis of benzyl (2S,4S)-4-methyl-5-oxo-2-phenyloxazolidine-3-carboxylate To a solution of ((benzyloxy)carbonyl)-L-alanine (5 g, 22.40 mmol) and (dimethoxymethyl)benzene (3.51 g, 23.07 mmol) in THF (36 mL) was added SOCI (2.93 g, 24.64 mmol) in one portion at 0 °C. The mixture was stirred for 10 min and then ZnCh (1 .15 mL, 24.64 mmol) was added. The mixture was then stirred at 0 °C for 4 h. The reaction mixture was quenched by the dropwise addition of cold H O, adjusted to pH 5 with sat. NaHCC, then extracted with EtOAc (2 x 30 mL). The organic phase was washed with a sat. aq. NaHC03 (30 mL) and brine (30 mL), dried with anhydrous Na2S04, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography (0 20% EtOAc/pet. ether) to afford the product (3.7 g, 53% yield) as an oil. |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | With dicyclohexyl-carbodiimide |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 50% | Stage #1: N-Cbz-Ala With 1,1'-carbonyldiimidazole In tetrahydrofuran at 20℃; Stage #2: D-alaninamide hydrochloride With triethylamine In tetrahydrofuran at 20℃; Further stages.; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 98% | Stage #1: N-Cbz-Ala; ethyl 2-<<1(S)-phenylethyl>amino>acetate With dicyclohexyl-carbodiimide In dichloromethane at 20℃; for 16h; Stage #2: With hydrogen In ethanol for 12h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 0.685 g | With benzotriazol-1-ol; N-(3-dimethylaminopropyl)-N-ethylcarbodiimide; triethylamine In dichloromethane for 6h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Multi-step reaction with 2 steps 1.1: isobutyl chloroformate; 4-methylmorpholine / CH2Cl2; diethyl ether / 0.75 h / -10 °C 1.2: 75 percent / CH2Cl2 / 7 h / 20 °C 2.1: 68 percent / Rh2(OAc)4 / CH2Cl2 / 15 h / -40 - 20 °C | ||
| Multi-step reaction with 3 steps 1: N,N-dimethyl-formamide; oxalyl dichloride / Schlenk technique 2: tetrahydrofuran; diethyl ether / 3 h / 0 - 20 °C / Inert atmosphere; Schlenk technique 3: dirhodium tetraacetate / dichloromethane / 0 - 20 °C / Schlenk technique |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Multi-step reaction with 2 steps 1: SOCl2 / 1 h / 0 °C 2: 1.9 g / ethanol |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With thionyl chloride In tetrahydrofuran; hexane; water | 1.1 Preparation of cis-3-carbobenzyloxy-4-methyl-2-phenyloxazolidinone Step 1 Preparation of cis-3-carbobenzyloxy-4-methyl-2-phenyloxazolidinone SOCl2 (0.65 ml, 8.96 mmol) was added to a stirring solution of (S)-N-carbobenzyloxy alanine (2.0 g. 8.96 mmol) and benzaldehyde dimethyl acetal (1.34 ml, 8.96 mmol) in dry THF (15 ml) at 0° C. After stirring for 5 min, anhydrous ZnCl2 (1.22 g, 8.96 mmol) was added and the reaction mixture was stirred at this temperature for 3 h. At this stage, 0.2 eq. each of SOCl2 (0.13 ml) and anhydrous ZnCl2 (0.25 g) were added and the reaction mixture was stirred for 1 h. The reaction was followed by silica gel TLC (20% ethyl acetate/hexane, Rf ~0.5). The reaction mixture was quenched by dropwise addition of water so that the reaction temperature did not exceed 10° C. It was extracted with ethyl acetate. The organic extract was washed with water until almost neutral, washed with sat. NaHCO3 solution, water and finally dried over anhydrous Na2 SO4. Evaporation of the solvent furnished a light yellow oil that solidified on stirring with 18 ml of hexane. The product was filtered and dried under reduced pressure (1.81 g, 65%, 29:1 cis/tans by NMR). The product was purified by crystallization from ethanol/water to give colorless needles, mp 52° C.-53° C. (1.46 g, 52.3%>50:1 cis by NMR). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With thionyl chloride; sodium hydrogencarbonate; In tetrahydrofuran; Petroleum ether; | (a) 53.6 g of carbobenzoxy-L-alanine are dissolved in 400 ml of dry tetrahydrofuran, the solution is treated dropwise with 30 g of thionyl chloride while cooling with ice and the mixture is stirred for 1 hour in the cold. A solution of 54 g (0.2 mol) of <strong>[2011-66-7]2-amino-5-nitro-2'-chlorobenzophenone</strong> in 150 ml of dry tetrahydrofuran is subsequently added dropwise thereto rapidly, whereupon the mixture is stirred at room temperature for 24 hours. The solution obtained is concentrated, the residue is treated with ice and 10 percent sodium bicarbonate solution and extracted with methylene chloride. The organic solution is dried over sodium sulphate and evaporated. The residue is treated with dry ether, left to crystallize for 1 hour and then filtered while rinsing with ether/petroleum ether (1:1). After drying, there is obtained (S)-benzyl-[1-[[2-(o-chlorobenzoyl)-4-nitrophenyl]carbamoyl]ethyl]carbamate of melting point 143-145; [alpha]25 D =18 (1 percent solution in methylene chloride). |
[ 1142-20-7 ]
[ 2338-18-3 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Example 20 phenylmethyl [2-[(2,3-dihydro-1H-inden-2-yl)amino]-1R-methyl-2-oxoethyl]carbamate STR29 (Z-(D)Ala-NH-2Indane) The title compound was prepared from Z-(D)Alanine (10 g, 44.8 mmol) and 2-amino indane hydrochloride (7.6 g, 44.8 mmol) by the method of Example 8. After workup, the crude solid was washed liberally with Et2 O to give 12.35 g of the white solid title material. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With phosphorus pentachloride; In tetrahydrofuran; toluene; | 82 g of carbobenzoxy-L-alanine are dissolved in 100 ml of absolute tetrahydrofuran, the solution is cooled to -40 C and treated with 80 g of phosphorus pentachloride. The mixture is stirred at -30 C for 20 minutes and subsequently added to a shaken solution of 80 g of <strong>[2011-66-7]2-amino-5-nitro-2'-chlorobenzophenone</strong> in 100 ml of absolute tetrahydrofuran. The solution is concentrated on a rotary evaporator at 50-60 C, treated twice with toluene and evaporated each time. By crystallisation of the residue from ether, there is obtained (-)-benzyl-[1-[{2-(o-chlorobenzoyl)4-nitrophenyl}carbamoyl]-ethyl]carbamate which melts at 147 C and exhibits a rotation of [alpha]25D =-18.2 (in methylene chloride, 1%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at 20℃; for 8h; | |
| 85% | With benzotriazol-1-ol; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at 20℃; | Synthesis of cyclo(-L-Am7(S-)-D-Am7(S-)-L-Ala-D-Pro-) (1) To a cold solution of Z-L-Ala-OH (2.847 g, 12.75 mmol) and H-DPro-OtBu (1.82 g, 10.63 mmol) in DMF (22 mL), HOBtH2O (1.628 g, 10.63 mmol) and DCC (2.64 g, 12.75 mmol) were added. The mixture was stirred overnight at room temperature. After completion of the reaction, DMF was removed by evaporation. The residue was dissolved in ethyl acetate (AcOEt) and filtered. Then it was washed with 10% citric acid, 4% NaHCO3 and brine, respectively. The AcOEt solution was dried over anhydrous MgSO4 and concentrated to remain an solid substance which was purified by silica gel chromatography using 1% methanol in chloroform (v/v) to yield Z-L-Ala-D-Pro-OtBu (3.388 g, 85%) as solid. To a solution of protected dipeptide (0.941 g, 2.50 mmol) in acetic acid (13 mL), Pd-C (125 mg) was added and the mixture was stirred under hydrogen atmosphere overnight. The reaction was monitored by TLC and HPLC. After completion of the reaction, Pd-C was filtered off and the acetic acid was evaporated. Then the residue was dissolved in AcOEt and was washed with saturated Na2CO3 solution. The AcOEt solution was dried over anhydrous Na2CO3 and concentrated to remain dipeptide free amine, H-L-Ala-D-Pro-OtBu (0.517 g, 85%). To a cold solution of Boc-D-Ab7-OH (0.694 g, 2.13 mmol) and free amine (0.517 g, 2.13 mmol) in DMF (5 mL), HOBtH2O (0.328 g, 2.13 mmol) and DCC (0.530 g, 2.56 mmol) were added and was stirred for 5 h on ice-bath. The product Boc-D-Ab7-L-Ala-D-Pro-OtBu was obtained in a similar manner as described earlier as white foam (0.880 g, 75%). The protected tripeptide (0.880 g, 1.6 mmol) was dissolved in 4 M HCl/dioxane (4 mL) in ice bath and was kept for 30 min at room temperature. After completion of the reaction, HCl/dioxane was removed by evaporation and the residue was dissolved in AcOEt. The solution was washed with saturated Na2CO3 solution and dried over anhydrous Na2CO3. The AcOEt solution was filtered and concentrated to remain free amine H-D-Ab7-L-Ala-D-Pro-OtBu (0.570 g, 1.27 mmol, 79%) which was condensed with Boc-L-Ab7-OH (0.412 g, 1.27 mmol) according to the method described earlier and the fully protected crude linear tetrapeptide was purified by silica gel chromatography using 1% methanol in chloroform (v/v) to yield Boc-L-Ab7-D-Ab7-L-Ala-DPro-OtBu (0. 570 g, 60%) as white foam. The protected tetrapeptide (0.555 g, 0.73 mmol) was dissolved in TFA (3 mL) on ice bath and kept for 3 h at room temperature. After evaporation of TFA, the residue was solidified using ether and petroleum ether to yield TFA salt of the linear tetrapeptide (0.500 g, 99%). The TFA salt of linear tetrapeptide, TFAH-L-Ab7-D-Ab7-L-Val-D-Pro-OH (0.500 g, 0.72 mmol), HATU (0.410 g, 1.08 mmol) and DIEA (0.313 mL, 1.8 mmol) were added in separate five portions to DMF (180 mL) in every 10 min interval with stirring. After completion of the cyclization reaction, the reaction was quenched by adding a small amount of acetic acid and DMF was evaporated and the residue was dissolved in AcOEt. Then solution was washed with 10%) citric acid, 4% NaHCO3 and brine, respectively. The AcOEt solution was dried over anhydrous MgSO4 and concentrated to remain an foamy substance, which was purified by silica gel chromatography using 1% methanol in chloroform (v/v) to yield cyclic tetrapeptide, cyclo(-L-Ab7-DAb7-L-Ala-D-Pro-) (0.260 g, 62%, HPLC: rt 6.72 min). To a solution of cyclic tetrapeptide (0.240 g, 0.41 mmol) in DMF (3 mL), KSAc (0.137 g, 1.23 mmol) was added and was stirred for 7 h at room temperature. DMF was evaporated and the residue was dissolved in AcOEt. Then it was washed with 10% citric acid and brine, respectively. The AcOEt solution was dried over anhydrous MgSO4 and concentrated to remain crude substance, which was purified by silica gel chromatography using 1% methanol in chloroform(v/v) to yield cyclo(-L-Am7(Ac)-D-Am7(Ac)-L-Ala-D-Pro-) (0.200 g, 85%, HPLC: rt 6.50 min) as heavy oil. The thio ester compound (0.145 g, 0.25 mmol) was dissolved in DMF (3 mL) and passed Ar to remove air. Then methyl amine in methanol (0.255 mL, 2.50 mmol) was added and stirred for 2 h at room temperature. After completion of the reaction, methylamine was evaporated and the residue was dissolved in DMF (50). Iodine in ethanol (0.064 g, 0.25 mmol) was added dropwise and stirred for 30 min at room temperature. After evaporation of DMF, The oxidized peptide was purified by LH-20 gel filtration with DMF as eluent. The cyclo(-L-Am7(S-)-D-Am7(S-)-L-Ala-D-Pro-) (1) (0.034 g, 0.07 mmol, 28%, HPLC: rt 5.33 min) was obtained as solid. HR-FABMS,[M+H]+ 485.2278 for C22H37N4O4S2 (calcd 485.2256). 1HNMR (500 MHz, CDCl3): dH 7.12 (d, J = 5.5 Hz, 1H), 6.42 (d,J = 10 Hz, 1H), 6.14 (d, J = 10 Hz, 1H), 4.89-4.98 (m, 1H), 4.71 (d,J = 7.5 Hz, 1H), 4.41-4.50 (m, 2H), 3.91-4.00 (m, 1H), 3.49-3.56 (m, 1H), 2.58-2.81 (m, 4H), 2.26-2.43 (m, 2H), 2.18 (t, J = 10 Hz,1H), 1.90-2.00 (m, 1H), 1.74-1.88 (m, 3H), 1.59-1.74 (m, 4H),1.26-1.54 (m, 12H). |
| 80% | With 1-hydroxybenzotriazol-hydrate; dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at 20℃; for 8h; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 34% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; triethylamine In dichloromethane Inert atmosphere; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 32% | With dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at -10℃; for 4h; | |
| With dicyclohexyl-carbodiimide In N,N-dimethyl-formamide at -15℃; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 83% | With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride; N-ethyl-N,N-diisopropylamine In N,N-dimethyl-formamide at 20℃; Inert atmosphere; | 4.2.1. General procedure A (13a-e) General procedure: The N-protected amino acid 12a-e (1 mmol), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (1.2 mmol), HOBt (1.2 mmol), DIPEA (4.75 mmol) and 2-propylaniline (1.2 mmol) were suspended in anhydrous DMF (5 mL). The reaction mixture was stirred at rt overnight under nitrogen. 1 M HCl (50 mL) was added and the mixture was extracted with ethyl acetate (3 × 50 mL). The combined organic phases were washed with 1 M HCl (50 mL), brine (50 mL), dried over anhydrous Na2SO4 and concentrated in vacuo. The residue was purified by flash chromatography on silica gel to yield 13a-e. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 60% | With boron trifluoride diethyl etherate In diethyl ether at -78 - 20℃; Inert atmosphere; |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 75% | With 1-hydroxy-7-aza-benzotriazole; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In N,N-dimethyl-formamide at 0℃; for 15h; | Representative example for 4-9: Preparation of methyl4-[[(2R)-2-(benzyloxycarbonylamino)-3-methyl-butanoyl]amino]-3-(methylamino)benzoate (7) General procedure: Toa solution of Z-D-Val-OH (0.98 g,3.88 mmol) in DMF (6 ml), methyl 4-amino-3-(methylamino)benzoate [1] (0.7 g,3.88 mmol) in DMF (2ml) was added at 0 oC. Subsequently, HOAt (0.79 g,5.82 mmol) and WSCI*HCl (1.12 g,5.82 mmol) were added to the former solution at 0 oC and stirred for15 h. The reaction mixture was quenched with saturated NH4Cl (10 ml)and extracted with EtOAc (100 ml). The combined extracts were washed with waterand brine, dried over MgSO4 and concentrated under reduced pressure. The residue was purified by silica gel column chromatography to give 1.4 g of 7. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 501 mg | With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide for 12h; | 106 EXAMPLE 106 109781 N-((S)- 1 -((R)-3 -(1 -(1 -((R)- 1 -(2,4-dichlorophenyl)ethyl)-3 -(trifluoromethyl)- 1H-pyrazolo[3 ,4-b]pyrazin-6-yl)azetidin-3 -yl)piperidin- 1 -yl)propan-2-yl)acetamide. Precursor VI (270 mg, 1.13 mmol) was condensed with (25)-2-(benzyloxycarbonylamino)propanoic acid (376.7 mg, 1.69 mmol) in DIVIF (3 mL) using 2-(3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)-1,1,3,3- tetramethylisouronium hexafluorophosphate(V) (642 mg, 1.69 mmol) and N,NDiisopropylethylamine (0.587 mL, 3.38 mmol) for 12 hours and then poured into ethyl acetate (50mL), washed with brine (5OmL), dried over sodium sulfate, filtered and concentrated under reduced pressure, the residue was purified by flash chromatography using silica gel and a gradient of ethyl acetate (10 to 100%) in hexanes to afford tert-butyl 3-[(3R)-1-[(2S)-2- (benzyloxycarbonylamino)propanoyl] -3 -piperidyl ] azetidine- 1 -carboxylate (501 mg, 1.13 mmol). tert-butyl 3 -[(3R)- 1- [(2 S)-2-(benzyloxycarbonylamino)propanoyl] -3 -piperidyl] azetidine- 1-carboxylate (501 mg, 1.13 mmol) was dissolved in tetrahydrofuran (6 mL) and treated with boranetetrahydrofuran complex (3.37 mL, 3.37 mmol, 1M in tetrahydrofuran) and stirred for 12 hours, quenched with methanol and concentrated under reduced pressure, the residue was purified by flash chromatography using silica gel and a gradient of methanol (0 to 20%) in DCM to afford tert-butyl 3 -[(3R)- 1 -[(2S)-2-(benzyloxycarbonylamino)propyl]-3 -piperidyl]azetidine- 1 -carboxylate (485 mg,1.13 mmol). tert-butyl 3 -[(3R)- 1 -[(2S)-2-(benzyloxycarbonylamino)propyl]-3 -piperidyl]azetidine- 1- carboxylate (485 mg, 1.13 mmol) was dissolved in methanol (5mL) and palladium on carbon 10 wt.% (89.4 mg) was added, the mixture was then placed under a hydrogen atmosphere (balloon) and stirred for 15 minutes, filtered through celite, concentrated under reduced pressure, diluted with DCM (5 mL), treated with triethylamine (0.468 mL, 3.38 mmol) and acetyl chloride (0.245 mL,3.38 mmol), stirred for 30 minutes, quenched with 1M sodium carbonate, extracted with ethyl acetate (2 x 5 mL), dried over sodium sulfate, concentrated in vacuo to afford tert-butyl 3-[(3R)-1- [(2S)-2-acetamidopropyl]-3 -piperidyl]azetidine- 1 -carboxylate (230 mg, 0.678 mmol). tert-butyl 3- [(3R)- 1 -[(2 S)-2-acetamidopropyl] -3 -piperidyl] azetidine- 1 -carboxyl ate was then condensed with Precursor V using general procedures C and D to afford the title compound. ‘H NIVIR (400 MHz,Methanol-d4 HC1 Salt) 7.95 (s, 1H), 7.48 (d, J= 2.1 Hz, 1H), 7.36 (d, J 8.5 Hz, 1H), 7.31 (dd, J= 8.5, 2.1 Hz, 1H), 6.45 (q, J= 7.0 Hz, 1H), 4.50-4.39 (m, 1H), 4.37-4.26 (m, 2H), 4.18-3.97(m, 4H), 3.52 - 3.42 (m, 1H), 3.23 - 3.06 (m, 2H), 3.06 -2.90 (m, 1H), 2.76 -2.62 (m, 1H), 2.61 -2.48 (m, 1H), 2.06 -2.00 (m, 1H), 2.00 (s, 3H), 2.00 - 1.93 (m, 1H), 1.91 (d, J= 7.1 Hz, 3H), 1.89-1.82 (m, 1H), 1.25 (d, J= 6.8 Hz, 3H), 1.23 - 1.14 (m, 1H). LCMS [M+H] 598.2. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 88% | With 4-methyl-morpholine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In dichloromethane at 0 - 20℃; | |
| 88% | With 4-methyl-morpholine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In dichloromethane at 0 - 20℃; | |
| 88 % | With 4-methyl-morpholine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In dichloromethane at 0 - 20℃; |
| 88 % | With 4-methyl-morpholine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In dichloromethane at 0 - 20℃; | 110 Example 110: Synthesis of (S)-methyl 2-((2R,3R)-3-((S)-1-((5S,8S,11S,14S,15R)-14-((S)-sec-butyl)-8,11-diisopropyl-15-methoxy-5,7,13-trimethyl-3,6,9,12-tetraoxo-1-phenyl-2-oxa-4,7,10,13-tetraazaheptadecan-17-oyl)pyrrolidin-2-yl)-3-methoxy-2-methylpropanamido)-3-phenylpropanoate At 0 °C,MMAF-OMe (0.132 g, 0.178 mmol, 1.0 eq) and ZL-alanine (0.119 g, 0.533 mmol, 3.0 eq) in anhydrous DCM solution (10 ml) HATU (0.135 g, 0.356 mmol, 2.0 eq) and NMM (0.12 ml, 1.07 mmol, 6.0 eq) were added sequentially. The reaction was stirred at 0 °C. for 10 minutes, then warmed to room temperature and stirred overnight. The mixture was diluted with DCM, washed with water and brine, dried over anhydrous Na2SO4, concentrated and purified by SiO2 column chromatography (20:1 DCM/MeOH) to give the title compound as a white foamy solid (0.148 g, 88% yield). |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 2h; | oxetan-3-ylmethyl ((benzyloxy)carbonyl)-L-alaninate To a mixture of ((benzyloxy)carbonyl)-L-alanine (6.08 g, 27.24 mmol), oxetan-3-ylmethanol (2 g, 22.7 mmol) and 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide HCl salt (EDCI) (5.66 g, 29.51 mmol) in acetonitrile (100 mL) was added 4-(Dimethylamino)pyridine (DMAP, 4.16 g, 34.05 mmol). Then the mixture was stirred at room temperature for 2 h, the reaction mixture was then diluted with EtOAc, washed with brine, dried organic solvent over sodium sulfate, and then concentrated in vacuum. The obtained residue was purified by silica gel chromatography eluting with 0-100% ethyl acetate in hexanes to afford the product. LCMS: MS m/z = 280.04 [M+1], tR = 1.11 min; LC system: Thermo Accela 1250 UHPLC; MS system: Thermo LCQ Fleet; Column: Kinetex 2.6µ XB-C18100A, 50 x 4.6 mm; Solvents: acetonitrile with 0.1% acetic acid, water with 0.1% acetic acid; Gradient: 0 min-2.0 min 2-100% acetonitrile, 2.0 min-3.05 min 100% acetonitrile, 3.05 min-3.2 min 100%-2% acetonitrile, 3.2 min-3.5 min 2% ACN at 2 µL/min. HPLC: tR = 2.88 min; HPLC system: Agilent 1290 II; Column: Phenomenex Kinetex C18, 2.6u 110A, 100 x 4.6 mm; Solvents: A: Water with 0.1% TFA, B: Acetonitrile with 0.1% TFA; Gradient: 2 - 98% B with 8.5 min gradient at 1.5 mL/min | |
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 2h; | oxetan-3-ylmethyl ((benzyloxy)carbonyl)-L-alaninate. To a mixture of ((benzyloxy)carbonyl)-L-alanine (6.08 g, 27.24 mmol), oxetan-3-ylmethanol (2 g, 22.7 mmol) and 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide HCl salt (EDCI) (5.66 g, 29.51 mmol) in acetonitrile (100 mL) was added 4-(Dimethylamino)pyridine (DMAP, 4.16 g, 34.05 mmol). Then the mixture was stirred at room temperature for 2 h, the reaction mixture was then diluted with EtOAc, washed with brine, dried organic solvent over sodium sulfate, and then concentrated in vacuum. The obtained residue was purified by silica gel chromatography eluting with 0-100% ethyl acetate in hexanes to afford the product. LCMS: MS m/z = 280.04 [M+1], tR = 1.11 min; LC system: Thermo Accela 1250 UHPLC; MS system: Thermo LCQ Fleet; Column: Kinetex 2.6μ XB-C18100A, 50 x 4.6 mm; Solvents: acetonitrile with 0.1% acetic acid, water with 0.1% acetic acid; Gradient: 0 min-2.0 min 2-100% acetonitrile, 2.0 min-3.05 min 100% acetonitrile, 3.05 min-3.2 min 100%-2% acetonitrile, 3.2 min-3.5 min 2% ACN at 2 μL/min. HPLC: tR = 2.88 min; HPLC system: Agilent 1290 II; Column: Phenomenex Kinetex C18, 2.6u 110A, 100 x 4.6 mm; Solvents: A: Water with 0.1% TFA, B: Acetonitrile with 0.1% TFA; Gradient: 2 - 98% B with 8.5 min gradient at 1.5 mL/min. | |
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 2h; | oxetan-3-ylmethyl ((benzyloxy)carbonyl)-L-alaninate. To a mixture of ((benzyloxy)carbonyl)-L-alanine (6.08 g, 27.24 mmol), oxetan-3-ylmethanol (2 g, 22.7 mmol) and 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide HCl salt (EDCI) (5.66 g, 29.51 mmol) in acetonitrile (100 mL) was added 4-(Dimethylamino)pyridine (DMAP, 4.16 g, 34.05 mmol). Then the mixture was stirred at room temperature for 2 h, the reaction mixture was then diluted with EtOAc, washed with brine, dried organic solvent over sodium sulfate, and then concentrated in vacuum. The obtained residue was purified by silica gel chromatography eluting with 0-100% ethyl acetate in hexanes to afford the product. LCMS: MS m/z = 280.04 [M+1], tR = 1.11 min; LC system: Thermo Accela 1250 UHPLC; MS system: Thermo LCQ Fleet; Column: Kinetex 2.6μ XB-C18100A, 50 x 4.6 mm; Solvents: acetonitrile with 0.1% acetic acid, water with 0.1% acetic acid; Gradient: 0 min-2.0 min 2-100% acetonitrile, 2.0 min-3.05 min 100% acetonitrile, 3.05 min-3.2 min 100%-2% acetonitrile, 3.2 min-3.5 min 2% ACN at 2 μL/min. HPLC: tR = 2.88 min; HPLC system: Agilent 1290 II; Column: Phenomenex Kinetex C18, 2.6u 110A, 100 x 4.6 mm; Solvents: A: Water with 0.1% TFA, B: Acetonitrile with 0.1% TFA; Gradient: 2 - 98% B with 8.5 min gradient at 1.5 mL/min. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Stage #1: trans (4-hydroxymethyl-cyclohexyl)-carbamic acid tert-butyl ester; N-Cbz-Ala With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile for 0.416667h; Stage #2: With dmap In acetonitrile for 4h; | ((1r,4S)-4-((tert-butoxycarbonyl)amino)cyclohexyl)methyl ((benzyloxy) carbonyl)- L-alaninate Cbz-L-Alanine (223 mg, 1.00 mmol) was dissolved in anhydrous MeCN (10 mL). trans-1-(Boc-amino)-4-(hydroxymethyl)cyclohexane (229 mg, 1.00 mmol) and EDCI (230 mg, 1.2 mmol) were added to the reaction, which was then stirred for 25 min. DMAP (122 mg, 1 mmol) was added in one portion, and the reaction was stirred for 4 h. The reaction mixture was diluted with ethyl acetate (15 mL) and washed with 5% aqueous citric acid solution (2 × 5 mL), followed with brine (10 mL). Organic extract was dried over anhydrous sodium sulfate and concentrated under reduced pressure. The crude residue was purified via SiO2 column chromatography (12 g SiO2 Combiflash HP Gold Column, 0-40% ethyl acetate/hexanes). Fractions containing the desired product were combined and concentrated under reduced pressure to give the product.1H NMR (400 MHz, chloroform-d) δ 7.41 - 7.27 (m, 5H), 5.29 (d, J = 7.6 Hz, 1H), 5.11 (s, 2H), 4.47 - 4.24 (m, 2H), 3.96 (d, J = 6.6 Hz, 2H), 3.37 (bs, 1H), 2.03 (m, 2H), 1.78 (m, 2H), 1.58 (m, 2H), 1.44 (m, 12H), 1.10 (m, 4H). | |
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 18.5h; | 210 ((1r,4S)-4-((tert-butoxycarbonyl)amino)cyclohexyl)methyl ((benzyloxy)carbonyl)- L-alaninate. trans-1-((tert-Butoxycarbonyl)amino)-4-(hydroxymethyl)cyclohexane (510 mg, 2.18 mmol) followed by N-(3-dimethylaminopropyl)-N′-ethylcarbodiimide hydrochloride (509 g, 2.62 mmol) were added to a solution of Z-Ala-OH (489 g, 2.18 mmol) in acetonitrile (22 mL) at RT. After 30 min, 4-(dimethylamino)pyridine (267 mg, 2.18 mmol) was added. After 18 h, the reaction was diluted with ethyl acetate (100 mL) and the resulting mixture was washed with 10% aqueous citric acid (2 x 100 mL) and brine (100 mL). The organic layer was dried over anhydrous sodium sulfate and concentrated under reduced pressure. The crude residue was subjected to silica gel chromatography eluting with 0-50% methanol in ethyl acetate to afford the product. 1H NMR (400 MHz, Chloroform-d) δ 7.41 - 7.29 (m, 5H), 5.28 (s, 1H), 5.11 (s, 2H), 4.46 - 4.27 (m, 2H), 3.96 (d, J = 6.6 Hz, 2H), 3.37 (s, 1H), 2.03 (s, 2H), 1.78 (s, 2H), 1.56 (s, 2H), 1.44 (s, 9H), 1.42 (d, J = 7.2 Hz, 3H), 1.08 (t, J = 9.7 Hz, 4H). LCMS: MS m/z = 434.87 [M+1], tR = 1.21 min; LC system: Thermo Accela 1250 UHPLC; MS system: Thermo LCQ Fleet; Column: Kinetex 2.6μ XB-C18100A, 50 x 3.0 mm; Solvents: acetonitrile with 0.1% formic acid, water with 0.1% formic acid; Gradient: 0 min-1.8 min 2-100% acetonitrile, 1.8 min- 1.85 min 100%-2% acetonitrile, 1.85 min-2.00 min 2% ACN at 1800 μL/min. HPLC: tR = 5.96 min; HPLC system: Agilent 1100 series; Column: Gemini 5μ C18110A, 50 x 4.6 mm; Solvents: Acetonitrile with 0.1% TFA, Water with 0.1% TFA; Gradient: 0 min-9.0 min 2-95% ACN, 9.0 min-10.0 min 95% ACN at 2 mL/min. | |
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 18.5h; | 210 ((1r,4S)-4-((tert-butoxycarbonyl)amino)cyclohexyl)methyl ((benzyloxy)carbonyl)- L-alaninate. trans-1-((tert-Butoxycarbonyl)amino)-4-(hydroxymethyl)cyclohexane (510 mg, 2.18 mmol) followed by N-(3-dimethylaminopropyl)-N′-ethylcarbodiimide hydrochloride (509 g, 2.62 mmol) were added to a solution of Z-Ala-OH (489 g, 2.18 mmol) in acetonitrile (22 mL) at RT. After 30 min, 4-(dimethylamino)pyridine (267 mg, 2.18 mmol) was added. After 18 h, the reaction was diluted with ethyl acetate (100 mL) and the resulting mixture was washed with 10% aqueous citric acid (2 x 100 mL) and brine (100 mL). The organic layer was dried over anhydrous sodium sulfate and concentrated under reduced pressure. The crude residue was subjected to silica gel chromatography eluting with 0-50% methanol in ethyl acetate to afford the product. 1H NMR (400 MHz, Chloroform-d) δ 7.41 - 7.29 (m, 5H), 5.28 (s, 1H), 5.11 (s, 2H), 4.46 - 4.27 (m, 2H), 3.96 (d, J = 6.6 Hz, 2H), 3.37 (s, 1H), 2.03 (s, 2H), 1.78 (s, 2H), 1.56 (s, 2H), 1.44 (s, 9H), 1.42 (d, J = 7.2 Hz, 3H), 1.08 (t, J = 9.7 Hz, 4H). LCMS: MS m/z = 434.87 [M+1], tR = 1.21 min; LC system: Thermo Accela 1250 UHPLC; MS system: Thermo LCQ Fleet; Column: Kinetex 2.6μ XB-C18100A, 50 x 3.0 mm; Solvents: acetonitrile with 0.1% formic acid, water with 0.1% formic acid; Gradient: 0 min-1.8 min 2-100% acetonitrile, 1.8 min- 1.85 min 100%-2% acetonitrile, 1.85 min-2.00 min 2% ACN at 1800 μL/min. HPLC: tR = 5.96 min; HPLC system: Agilent 1100 series; Column: Gemini 5μ C18110A, 50 x 4.6 mm; Solvents: Acetonitrile with 0.1% TFA, Water with 0.1% TFA; Gradient: 0 min-9.0 min 2-95% ACN, 9.0 min-10.0 min 95% ACN at 2 mL/min. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 15h; | 142 (S)-(1R,4S)-4-methylcyclohexyl 2-aminopropanoate. To a mixture of Cbz-L- alaninate (1.0 g, 4.48 mmol), trans-4-methylcyclohexanol (1.62 g, 14.21 mmol), and EDCI (0.83 g, 5.38 mmol) in acetonitrile (10 mL) was added DMAP (0.82 g, 6.72 mmol) in one portion. The resulting mixture was stirred at room temperature for 15 h, diluted with EtOAc, washed with brine, dried over sodium sulfate, and concentrated in vacuo. The obtained residue was purified by silica gel chromatography (EtOAc 0 to 50% in hexanes) to give a Cbz-L- alanine-trans-4-methylcyclohexyl ester, which was dissolved in THF (10 mL) and 20% palladium hydroxide on carbon (250 mg) was added. The resulting mixture was stirred under hydrogen gas balloon for 2 h, filtered through a celite pad. The filtrate was concentrated in vacuo, and dried under high vacuum to afford the intermediate which was used in next reaction. 1H NMR (400 MHz, Chloroform-d) δ 4.66 (tt, J = 11.1, 4.4 Hz, 1H), 3.49 (qd, J = 7.0, 0.9 Hz, 1H), 1.93 (ddt, J = 12.8, 6.0, 2.8 Hz, 2H), 1.83 (d, J = 1.9 Hz, 2H), 1.77 - 1.66 (m, 2H), 1.43 - 1.22 (m, 6H), 1.10 - 0.93 (m, 2H), 0.88 (d, J = 6.5 Hz, 3H). MS m/z = 186 (M+H)+. | |
| With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 20℃; for 15h; | 142 (S)-(1R,4S)-4-methylcyclohexyl 2-aminopropanoate. To a mixture of Cbz-L- alaninate (1.0 g, 4.48 mmol), trans-4-methylcyclohexanol (1.62 g, 14.21 mmol), and EDCI (0.83 g, 5.38 mmol) in acetonitrile (10 mL) was added DMAP (0.82 g, 6.72 mmol) in one portion. The resulting mixture was stirred at room temperature for 15 h, diluted with EtOAc, washed with brine, dried over sodium sulfate, and concentrated in vacuo. The obtained residue was purified by silica gel chromatography (EtOAc 0 to 50% in hexanes) to give a Cbz-L- alanine-trans-4-methylcyclohexyl ester, which was dissolved in THF (10 mL) and 20% palladium hydroxide on carbon (250 mg) was added. The resulting mixture was stirred under hydrogen gas balloon for 2 h, filtered through a celite pad. The filtrate was concentrated in vacuo, and dried under high vacuum to afford the intermediate which was used in next reaction. 1H NMR (400 MHz, Chloroform-d) δ 4.66 (tt, J = 11.1, 4.4 Hz, 1H), 3.49 (qd, J = 7.0, 0.9 Hz, 1H), 1.93 (ddt, J = 12.8, 6.0, 2.8 Hz, 2H), 1.83 (d, J = 1.9 Hz, 2H), 1.77 - 1.66 (m, 2H), 1.43 - 1.22 (m, 6H), 1.10 - 0.93 (m, 2H), 0.88 (d, J = 6.5 Hz, 3H). MS m/z = 186 (M+H)+. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Stage #1: N-Cbz-Ala With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile for 0.25h; Stage #2: (S)-(-)-lactamide With dmap In acetonitrile for 6h; | 160 (S)-1-amino-1-oxopropan-2-yl ((benzyloxy)carbonyl)-L-alaninate. Cbz-L-Ala (446 mg, 2 mmol) was dissolved in anhydrous acetonitrile (15 mL). EDCI (460 mg, 2.4 mmol) was added in one portion, and the reaction was stirred for 15 mins. (S)-Lactamide (178 mg, 2 mmol) was added in one portion and then DMAP (269 mg, 2.2 mmol) was added. Reaction was stirred for 6 hrs. Reaction was diluted with EtOAc (30 mL) and washed with 5% aqueous citric acid solution (15 mL), followed with saturated aqueous sodium bicarbonate solution (15 mL) and finally with brine (10 mL). Organic extract was dried over anhydrous sodium sulfate and concentrated under reduced pressure to give the intermediate which was used for next step without purification. 1H NMR (400 MHz, Chloroform-d) δ 7.35 (m, 5H), 6.55 (s, 1H), 5.38 - 4.93 (m, 5H), 4.34 (p, J = 7.2 Hz, 1H), 1.47 (m, 6H). | |
| Stage #1: N-Cbz-Ala With 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile for 0.25h; Stage #2: (S)-(-)-lactamide With dmap In acetonitrile for 6h; | 160 (S)-1-amino-1-oxopropan-2-yl ((benzyloxy)carbonyl)-L-alaninate. Cbz-L-Ala (446 mg, 2 mmol) was dissolved in anhydrous acetonitrile (15 mL). EDCI (460 mg, 2.4 mmol) was added in one portion, and the reaction was stirred for 15 mins. (S)-Lactamide (178 mg, 2 mmol) was added in one portion and then DMAP (269 mg, 2.2 mmol) was added. Reaction was stirred for 6 hrs. Reaction was diluted with EtOAc (30 mL) and washed with 5% aqueous citric acid solution (15 mL), followed with saturated aqueous sodium bicarbonate solution (15 mL) and finally with brine (10 mL). Organic extract was dried over anhydrous sodium sulfate and concentrated under reduced pressure to give the intermediate which was used for next step without purification. 1H NMR (400 MHz, Chloroform-d) δ 7.35 (m, 5H), 6.55 (s, 1H), 5.38 - 4.93 (m, 5H), 4.34 (p, J = 7.2 Hz, 1H), 1.47 (m, 6H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With di-isopropyl azodicarboxylate; triphenylphosphine In tetrahydrofuran at 20℃; for 15h; | 178 Cis-4-(trifluoromethyl)cyclohexyl L-alaninate. To a mixture of cbz-L-alanine (1.80 g, 8.06 mmol), trans-4-trifluoromethylcyclohexanol (0.9 g, 5.35 mmol), and Ph3P (3.17 g, 12.10 mmol) in THF (50 mL) was added DIAD (2.38 mL, 12.10 mmol). The mixture was stirred at room temperature for 15 h and concentrated in vacuo. The obtained residue was purified by silica gel chromatography (EtOAc 0 to 30% in hexanes) to give a Cbz-L-alanine cyclohexyl ester, which was dissolved in THF (10 mL) and 20% palladium hydroxide on carbon (250 mg) was added. The resulting mixture was stirred under H2 for 2 h and filtered. The filtrate was concentrated in vacuo, dried under high vacuum, and used next reaction (747 mg, 39%). MS m/z = 240 [M+H]. | |
| With di-isopropyl azodicarboxylate; triphenylphosphine In tetrahydrofuran at 20℃; for 15h; | 178 Cis-4-(trifluoromethyl)cyclohexyl L-alaninate. To a mixture of cbz-L-alanine (1.80 g, 8.06 mmol), trans-4-trifluoromethylcyclohexanol (0.9 g, 5.35 mmol), and Ph3P (3.17 g, 12.10 mmol) in THF (50 mL) was added DIAD (2.38 mL, 12.10 mmol). The mixture was stirred at room temperature for 15 h and concentrated in vacuo. The obtained residue was purified by silica gel chromatography (EtOAc 0 to 30% in hexanes) to give a Cbz-L-alanine cyclohexyl ester, which was dissolved in THF (10 mL) and 20% palladium hydroxide on carbon (250 mg) was added. The resulting mixture was stirred under H2 for 2 h and filtered. The filtrate was concentrated in vacuo, dried under high vacuum, and used next reaction (747 mg, 39%). MS m/z = 240 [M+H]. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 72 % | With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 25℃; | Step 1: Preparation of 2-methoxy-2-methylpropyl ((benzyloxy)carbonyl)-L-alaninate To a solution of ((benzyloxy)carbonyl)-L-alanine (1.64 g, 7.34 mmol, 1 eq.) and 2-methoxy-2-methylpropan-1-ol (916 mg, 8.80 mmol, 1.2 eq.) in ACN (20 ml) were added EDCI (1.68 g, 8.80 mmol, 1.2 eq.) and DMAP (1.07 g, 8.80 mmol, 1.2 eq.). The mixture was stirred at 25 °C for 16 h. After completion, the reaction mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL x 3). The organic layers were combined and washed with brine (10 mL), dried over anhydrous Na2SO4, and concentrated under reduced pressure. The residue was purified by flash column chromatography on silica gel to afford 2-methoxy-2-methylpropyl ((benzyloxy)carbonyl)-L-alaninate (2, 1.63 g, 5.27 mmol, 72%) as a colorless oil. LCMS (ESI): m/z = 310 [M+H]+. |
| 72 % | With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In acetonitrile at 25℃; | Step 1: Preparation of 2-methoxy-2-methylpropyl ((benzyloxy)carbonyl)-L-alaninate To a solution of ((benzyloxy)carbonyl)-L-alanine (1.64 g, 7.34 mmol, 1 eq.) and 2-methoxy-2-methylpropan-1-ol (916 mg, 8.80 mmol, 1.2 eq.) in ACN (20 ml) were added EDCI (1.68 g, 8.80 mmol, 1.2 eq.) and DMAP (1.07 g, 8.80 mmol, 1.2 eq.). The mixture was stirred at 25 °C for 16 h. After completion, the reaction mixture was diluted with H2O (10 mL) and extracted with DCM (10 mL x 3). The organic layers were combined and washed with brine (10 mL), dried over anhydrous Na2SO4, and concentrated under reduced pressure. The residue was purified by flash column chromatography on silica gel to afford 2-methoxy-2-methylpropyl ((benzyloxy)carbonyl)-L-alaninate (2, 1.63 g, 5.27 mmol, 72%) as a colorless oil. LCMS (ESI): m/z = 310 [M+H]+. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 1.14 g | With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate In N,N-dimethyl-formamide at 20℃; | tert-butyl N-[(benzyloxy)carbonyl]-L-alanyl-N-methyl-L-alaninate A solution of N-[(benzyloxy)carbonyl]-L-alanine (750 mg, 3.36 mmol) in DMF (25 mL) was supplemented with tert-butyl N-methyl-L-alaninate hydrogen chloric acid salt (723 mg, 3.70 mmol), N,N-diisopropylethylamine (1.6 mL, 9.1 mmol) and HATU (1.66 g, 4.37 mmol) and the reaction was stirred at room temperature for 30 minutes. The mixture was concentrated to dryness under reduced pressure and the residue was purified by preparative HPLC to yield 1.14 g of the product. LC-MS (Method 1): Rt = 1.01 min; MS (ESIpos): m/z = 364 (M+H)+ |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 76.92 % | With dmap; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In ethanol at 20℃; Inert atmosphere; | 24.1 Step 1: (2R,4r,6S)-2,6-dimethyltetrahydro-2H-pyran-4-yl((benzyloxy)carbonyl)-L-alaninate (34-3) Under nitrogen protection at room temperature, 1-ethyl-(3-dimethylaminopropyl)carbodiimide hydrochloride (2.70 g, 13.46 mmol, 1.5 eq) and 4-dimethylaminopyridine (0.22 g, 1.79 mmol, 0.2 eq) were added to a solution of ((benzyloxy)carbonyl)-L-alanine (2.00 g, 8.97 mmol, 1 eq) and (2R,4r,6S)-2,6-dimethyltetrahydro-2H-pyran-4-ol (1.28 g, 9.87 mmol, 1.1 eq) in dichloromethane (20 mL) and the resulting mixed solution was stirred at room temperature under nitrogen protection for 16 hours. After the reaction was completed, the mixture was concentrated under reduced pressure. The residue was purified by silica gel column chromatography eluting with 10% petroleum ether/ethyl acetate to give (2R,4r,6S)-2,6-dimethyltetrahydro-2H-pyran-4-yl((benzyloxy)carbonyl)-L-alaninate (1.80 g, 5.37 mmol, 60.37% yield) as a colorless oil. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Multi-step reaction with 2 steps 1: dichloromethane / 20 °C 2: N-ethyl-N,N-diisopropylamine / water; acetonitrile |

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