Structure of 161511-85-9
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| CAS No. : | 161511-85-9 |
| Formula : | C9H17NO3 |
| M.W : | 187.24 |
| SMILES Code : | OC[C@H]1N(C(OC(C)(C)C)=O)CC1 |
| MDL No. : | MFCD03093620 |
| InChI Key : | XIRUXUKRGUFEKC-ZETCQYMHSA-N |
| Pubchem ID : | 10511797 |
| GHS Pictogram: |
|
| Signal Word: | Warning |
| Hazard Statements: | H302-H315-H319-H335 |
| Precautionary Statements: | P261-P305+P351+P338 |
| Num. heavy atoms | 13 |
| Num. arom. heavy atoms | 0 |
| Fraction Csp3 | 0.89 |
| Num. rotatable bonds | 4 |
| Num. H-bond acceptors | 3.0 |
| Num. H-bond donors | 1.0 |
| Molar Refractivity | 52.95 |
| TPSA ? Topological Polar Surface Area: Calculated from |
49.77 Ų |
| Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.43 |
| Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
0.62 |
| Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
0.61 |
| Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.56 |
| Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.36 |
| Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.91 |
| Log S (ESOL):? ESOL: Topological method implemented from |
-1.13 |
| Solubility | 14.0 mg/ml ; 0.0746 mol/l |
| Class? Solubility class: Log S scale |
Very soluble |
| Log S (Ali)? Ali: Topological method implemented from |
-1.24 |
| Solubility | 10.8 mg/ml ; 0.0576 mol/l |
| Class? Solubility class: Log S scale |
Very soluble |
| Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-0.55 |
| Solubility | 53.1 mg/ml ; 0.284 mol/l |
| Class? Solubility class: Log S scale |
Soluble |
| GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
| BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
| P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
| CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
| CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
| CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
| CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
| CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
| Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-7.0 cm/s |
| Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
| Ghose? Ghose filter: implemented from |
None |
| Veber? Veber (GSK) filter: implemented from |
0.0 |
| Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
| Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
| Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
| PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
| Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
| Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
| Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.6 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 100% | Example 16 (S)-tert-Butyl 2-(Hydroxymethyl)azetidine-1-carboxylate (14).17 To a solution of 13 (0.94 g, 4.7 mmol) in THF (10 mL) was added slowly a 1 M BH3 in THF (21.0 mL) at 0 C. The mixture was stirred 2 days at ambient temperature, then cold water (20 mL) was added at 0 C. After evaporation of the THF in vacuo, an 10% aqueous solution of citric acid (15 mL) was added and extracted with ethyl acetate (50 mL*2). The combined ethyl acetate was washed with saturated NaHCO3 (30 mL) and NaCl (30 mL), and dried over Na2SO4. Evaporation of the ethyl acetate in vacuo afforded 0.86 g (100%) of 14 as a colorless oil. 1H NMR (300 MHz, CDCl3) δ 4.40 (m, 1), 3.85-3.70 (m, 3H), 2.13 (m, 1H), 1.90 (m, 1H), 1.42 (s, 9H). | |
| 87% | With boron dimethyl-trifluoro sulphide; In tetrahydrofuran; at 0℃; for 2h;Heating / reflux; | (S)-1-(tert-butoxycarbonyl)-2-azetidinecarboxylic acid (10.42 g, 49.4mmol) was introduced into a 500-mLpear-shaped flask, and tetrahydrofuran (200 mL) was added to dissolve the compound. Then, a tetrahydrofuran solution of 10 M borane-dimethyl sulfide complex salt (9.87 mL, 98.7 mmol) was slowly added at 0C, and the mixture was heated to reflux for 2 hours while stirring. The reaction solution was left to cool, and then was concentrated under reduced pressure. Ice water (100 mL) was poured thereto, and the mixture was extracted with ethyl acetate (200 mLx2). The extract was washed with saturated brine (200 mL), and then dried over anhydrous sodium sulfate. After filtering the extract, the filtrate was concentrated under reduced pressure to obtain the title compound (8.03 g, 42.9mmol, 87%) as an oily matter. NMR(CDCl3)δ:1.45(9H,s),1.93(1H,brs),2.13-2.22(1H,m),3.67-3.81(3H,m),3.87(1H,q,J=8.8Hz),4.21(1H,br s),4.44(1H,br s). MS(ESI)m/z:188(M++1). |
| With sodium tetrahydroborate; iodine; In tetrahydrofuran; at 0℃; for 19.5h;Reflux; Inert atmosphere; | To 699 mg (18.48 mmol) sodium borohydride in 20 mL dry THF under nitrogen, was added 1.15 g (5.74 mmol) (S)-azetidine-1 ,2-dicarboxylic acid 1 -te/f-butyl ester and the reaction was cooled to 0 C, 1.72 g (6.78 mmol) iodine in 10 mL dry THF was added dropwise over 30 minutes, the reaction mixture was allowed to warm to room temperature, and was heated under reflux for 19 hours. The mixture was cooled to room temperature and 25 mL MeOH was added dropwise over 15 minutes. After evaporation of the solvent, 30 mL KOH (1 M) was added and the mixture was stirred at room temperature for 2 hours. The aqueous phase was extracted with DCM (2 x 75 mL) and the combined organic layers were washed with saturated brine (3 x 50 mL), then dried over MgSO4. After filtration, the solvent was evaporated to give the desired product, which was used for the next step without further purification. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 85% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; at 20℃; for 48h; | To a stirred solution of 1-tert-butoxycarbonyl-2 (5)-AZETIDINE (800 mg, 4.3 mmol) and 3-bromo-5- hydroxypyridine (800 mg, 4.6 mmol), and PPh3 (1.69 g, 6.45 mmol) in THF (50 mL) was slowly added DEAD (1.02 mL, 6.45 mmol). The reaction mixture was stirred at room temperature for 48 h, and concentrated in vacuo. The residue was purified by chromatography with hexane-EtOAc (4: 1) to give a light yellow oil (1.25 g, 85%). H NMR (CDC13) 6 8.29 (d, 1H, J= 2.1 Hz), 8. 28 (d, 1H, J= 2.7 Hz), 7.43 (t, 1H, J= 2.4 Hz), 4.51 (M, 1H), 4.34 (M, 1H), 4. 13 (dd, 1H, J= 10.2, 3.0 Hz), 3. 89 (t, 2H, J= 7.5 Hz), 2.42-2. 22 (M, 2H), 1.43 (s, 9H) ; 13C NMR (CDC13) 8 156.05, 155.35, 143.07, 136.58, 123.96, 120.25, 79.75, 68. 90,59. 84, 47.02, 28. 31,18. 88. |
| 70% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; | A gram-scale synthesis of sazetidine A is outlined in Figure Ia. The Boc-protected azidityl methyl alcohol 2 and 3 -bromo-5 -hydroxy pyridine (3) are both commercially available. Treatment with PPh3 and DEAD according to the Mitsunobu protocol formed ether derivative 4 in 70% yield. Palladium-mediated coupling of the bromo-substituted pyridine 4 with 5-hexyn-l-ol under modified Sonogashira conditions furnished Boc- protected sazetidine A in 73% yield. Deprotection of the Boc-group with HCl was expected to give sazetidine A in salt form as published in the literature. However, after several <n="43"/>AtIy Docket No.: GUX-023.25 attempts, it was found that the HCl salt, especially on larger scale, was a white solid that could be obtained in only moderate yield by a tedious filtration under an inert atmosphere. Exposure of the material to air immediately resulted in decomposition of the material to a yellow-brown wet solid. Therefore, in order to obtain gram quantities of pure sazetidine A, it was found that it was necessary to treat the deprotected material immediately with NH4OH and then isolated the free base of sazetidine A. This product was then taken up in an aqueous solution of HCl to give a solution of the HCl salt of sazetidine A. This modified method gives purer material and was indeed found to be more potent than that reported in the literature. |
| 64% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; toluene; at 0 - 20℃;Inert atmosphere; | Under N2 stream, triphenylphosphine (7.8 g, 29.7 mmol), 40% diethyl azodicarboxylate (40% solution in toluene, 5.2 mL), and 5-bromo-3-hydroxynicotinic acid (5.2 g, 29.7 mmol) at 0 C were added to a solution of 1 (3.6 g, 19.8 mmol) in THF (20 mL). The mixture was stirred at 0 C for 10 min and then warmed to room temperature and stirred overnight. After the reaction, the solvent was removed under reduced pressure followed by silica gel chromatography (petroleum ether/ethylacetate=1/1) to yield 8 (4.35 g, 12.7 mmol, 64%) as a colorless oil. 1HNMR (500 MHz, CDCl3) δ; 8.29 (t, J=2.6 Hz, 2H), 7.45-7.42 (m, 1H),4.55-4.48 (m, 1H), 4.33 (broad s, 1H), 4.13 (dd, J=7.5, 2.9 Hz, 1H),3.89 (m, 2H), 2.39-2.24 (m, 2H), 1.43 (s, 9H). 13C NMR (125 MHz,CDCl3) δ; 156.1, 155.4, 143.2, 136.7, 124.1, 120.3, 79.9, 69.0, 64.2,59.5, 28.4, 19.0. MS (EI+) m/z; 344 ([M+2]+, 1.97), 342 (M+, 1.92),271 (5.59), 269 (5.81), 243 (5.83), 241 (6.09), 156 (28), 113 (22), 100(34), 57 (1 0 0). HRMS (EI+) m/z; 342.0585 (Calcd: 342.0578 forC14H19N2O3Br). [α]D20=-59.63 (c=2.24, CHCl3). |
| 55% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; toluene; at 10 - 20℃; for 48h;Inert atmosphere; | General procedure for Mitsunobu Reaction (Method A). To a mixture of 5-Bromo-3- pyridinol (1.2 equiv) and Ph3P (1.6 equiv) in anhydrous THF taken in a flame-dried flask under N2, N-Boc protected alcohol (1 equiv) was added and the mixture was cooled to - 10 C. Diethyl azodicarboxylate (40% w/v) in toluene (1.6 equiv) was added dropwise to the mixture and was warmed gradually to the room temperature. After 48 h, the reaction mixture was quenched with 1 mL of water and the solvent was removed under reduced pressure. The resulting yellow oil was purified by column chromatography on silica gel to yield 55-60% as a white solid. Example 3(S)-tei"i-butyl-2-((5-bromopyridin-3-yloxy)methyl)azetidine-l-carboxylate (VMY-2-3): Method A was used. Yield 55% (white solid). 1H NMR (400 MHz, CDC13) ? 8.25 - 8.19 (m, 2H), 7.36 (s, 1H), 4.44 (d, J= 5.3, 1H), 4.32 - 4.20 (m, 1H), 4.06 (dd, J = 2.8, 10.1, 1H), 3.81 (t, J= 7.5, 2H), 2.36 - 2.14 (m, 2H), 1.36 (s, 9H). 13C NMR (100 MHz, CDC13 ) ? 156.07,155.41, 143.13, 136.65, 124.02, 120.28, 79.76, 69.00, 59.92,47.14, 28.37, 18.95.HRMS (ESI): exact mass calcd for Ci4Hi9BrN203 [M+H]+, 343.0657, found 343.0670. |
| With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; | 12a. 5-((2S)-Azetidinylmethyloxy)-3-bromopyridine dibenzoate Triphenylphosphine (4.01 g, 15.3 mmol) and DEAD (2.43 mL, 15.3 mnol) were dissolved in 30 mL of THF at 0 C., and the mixture was stirred for 10 minutes. Samples of 1-t-butyloxycarbonyl-2-(S)-azetidinemethanol (2.86 g, 15.3 mmol, Step 7c above) and 3-bromo-5-hydroxypyridine.(1.51 g, 10.2 mmol, Step 10c above) were added, and the mixture was stirred for 40 hours at room temperature. The volatile components were removed under vacuum, and the residue was triturated with hexane. The separated hexane fraction was concentrated, and the residue was chromatographed (silica gel; hexane/ether, 10:1 to 10:2) to afford 5-bromo-3-((1-t-butyloxycarbonyl-(2S)-azetidinyl)methoxy)pyridine as a colorless oil (1.669 g): 1 H NMR (CDCl3, 300 MHz) δ 1.42 (s, 9H), 2.31 (m, 2H), 3.89 (m, 2H), 4.12 (m, 1 H), 4.322 (m, 1 H), 4.52 (m, 1 H), 7.43 (m, 1 H), 8.29 (m, 2H); MS (CI/NH3) m/z 344 (M+H)+. |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 88% | 39a. 5-chloro-3-(N-t-butoxycarbonyl-2-(S)-azetidinylmethoxy)pyridine An ice-cooled solution of the compound from Example 7b (0.242 g, 1.20 mmol) was allowed to react with 3-chloro-5-hydroxypyridine (0.187 g, 1.40 mmol) under the conditions of Example 2a, except that DEAD was replaced with di-t-butylazodicarbonate, to yield the title compound (0.137 g, 88%) after purification on silica gel (ethyl acetate/hexane 2:1). MS (DCI/NH3) m/e: 299 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ: 8.25 (d, J=1.38 Hz, 1H), 8.21 (br. s, 1H), 7.29 (t, J=2.2 Hz, 1H), 4.53-4.51 (m, 1H), 4.34-4.33 (m, 1H), 4.13 (dd, J=10.3, 2.9 Hz, 1H), 3.91-3.86 (m, 2H), 2.51 (s, 3H), 2.38-2.29 (m, 2H), 1.43 (s, 9H). | |
| 39a. 5-chloro-3-(N-t-butoxycarbonyl-2-(S)-azetidinylmethoxy)pyridine An ice-cooled solution of the compound from Example 7b (0.242 g, 1.20 mmol) was allowed to react with 3-chloro-5-hydroxypyridine (0.187 g, 1.40 mmol) under the conditions of Example 2a, except that DEAD was replaced with di-t-butylazodicarbonate, to yield the title compound (0.137 g, 88%o) after purification on silica gel (ethyl acetate/hexane 2:1). MS (DCI/NH3) m/e: 299 (M+H)+. 1 H NMR (CDCl3,300 MHz) δ: 8.25 (d, J=1.38 Hz, 1H), 8.21 (br. s, 1H), 7.29 (t, J=2.2 Hz, 1H), 4.53-4.51 (m, 1H), 4.34-4.33 (m, 1H), 4.13 (dd, J=10.3, 2.9 Hz, 1H), 3.91-3.86 (m, 2H), 2.51 (s, 3H), 2.38-2.29 (m, 2H), 1.43 (s, 9H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 86% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; at 0 - 20℃; for 48h;Inert atmosphere; | General Procedure for the Mitsunobu Reaction. To a mixture of the N-Boc protected alcohol (1.0 equiv), the 5-halogen-3-pyridinol (1.0 equiv), and Ph3P (1.3 equiv) in anhydrous THF (0.1 M) was added DEAD (1.3 equiv) dropwise at 0 C under nitrogen atmosphere. After stirring for 2 days at room temperature, the solvent was removed under reduced pressure. The residue was purified by column chromatography on silica gel using a gradient of hexane-ethyl acetate (10: 1 to 5: 1) as the eluent to give the product in 68%-90% yield. (S)-tert-butyl-2-((5-iodopyridin-3-yloxy)methyl)azetidine-l-carboxylate ((S)-5). Yield: 86' (white solid). 1H NMR (CDC13, 400 MHz): δ 8.43 (d, 1H, J= 1.2 Hz), 8.30 (d, 1H, J= 2.4 Hz), 7.61 (dd, 1H, J = 2.4, 1.6 Hz), 4.50 (m, 1H), 4.32 (m, 1H), 4.12 (dd, J = 10, 2.8 Hz), 3.88 (m, 2H), 2.31 (m, 2H), 1.43 (s, 9H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 96% | With pyridine; In dichloromethane; at 20℃;Cooling with ice; | To a solution of [l-(?ert-butoxycarbonyl)-2(lSr)-azetidinyl]methanol (3.74 g, 20 mmol) and pyridine (24 g, 300 mmol, 15 equiv.) in CH2Cl2 (20 mL) was added p- toluenesulfonyl chloride (5.72 g, 30 mmol, 1.5 equiv.) with ice cooling under N2. The solution was stirred overnight at room temperature and diluted with water. After phase separation, the aqueous layer was extracted with EtOAc (3 x 100 mL). The combined organic layers were washed with saturated aqueous NH4Cl solution and brine, dried over Na2SO4, and concentrated. The residue was loaded onto a silica gel column, which was eluted with EtO Ac/petroleum ether 1:10 to give the tosylate (6.5 g, 96%) as a colorless oil. 1H NMR (CDCl3, 500 MHz) δ 7.82 (d, 2H, J = 8.2 Hz), 7.37 (d, IH, J = 8.0 Hz), 4.35 (br s, IH), 4.26 (br s, IH), 4.15 (dd, IH, J = 10.2, 2.8 Hz), 3.84-3.77 (m, 2H), 2.46 (s, 3H), 2.30-2.23 (m, IH), 2.17 (br s, IH), 1.39 (s, 9H). LC-MS (ESI) m/z 364 (M+Na+). |
| In pyridine; | 10b. (S)-1-t-butyloxycarbonyl-2-toluensulfonyloxymethylazetidine A solution of <strong>[161511-85-9](2S)-1-t-butyloxycarbonyl-2-azetidinemethanol</strong> (22.6 g, 0.121 mol) in 40 mL of pyridine was treated with p-toluenesulfonyl chloride (27.6 g, 0.145 mol). The resulting mixture was stirred at room temperature for 16 hours, diluted with CH2 Cl2 and washed sequentially with 1 N aqueous HCl, H2 O, saturated aqueous K2 CO3, and brine. The organic phase was dried (Na2 SO4) and concentrated. Purification by chromatography (silica gel; Hexane/EtOAc, 80:20) afforded 32.8 g of a white solid which was recrystallized from CH2 Cl2 /hexane to afford the title compound as thin white needles: mp 59-60 C.; 1 H NMR (CDCl3, 300 MHz) δ 1.37 (s, 9H), 2.15-3.28 (m, 2H), 2.44 (s, 3H), 3.74-3.81 (m, 2H), 4.13 (dd, J=3.1, 10.2 Hz, 1 H), 4.23-4.34 (m, 2H), 7.35 (d, J=8.1 Hz, 2H), 7.80 (d, J=8.2 Hz, 2H); MS (CI/NH3) m/z: 242 (M+H)+. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With hydrogenchloride; In water; at 20℃; for 1h; | 2-(S)-Hydroxymethyl-azetidine-1-carboxylic acid tert-butyl ester (1.8 g), prepared as described in Abreo, et al. J. Med. Chem. 1996, 39, 817-825, was treated with concentrated HCl (6 mL), stirred at ambient temperature for 1 hour, concentrated and dried under vacuum. 1H NMR (300 MHz, CDCl3) δ 2.50 (m, 2 H) 3.87-4.15 (m, 4 H) 4.27 (br. s, 1 H) 4.66 (m, 1 H) 8.95 (br. s,1 H) 9.35 (br. s,1 H). | |
| With hydrogenchloride; In water; at 20℃; for 1h; | 2-(S)-Hydroxymethyl-azetidine-1-carboxylic acid tert-butyl ester (1.8 g), prepared as described in Abreo, et al. J. Med. Chem. 1996, 39, 817-825, was treated with concentrated HCl (6 mL), stirred at ambient temperature for 1 hour, concentrated and dried under vacuum. 1H NMR (300 MHz, CDCl3) ? 2.50 (m, 2H) 3.87-4.15 (m, 4H) 4.27 (br. s, 1H) 4.66 (m, 1H) 8.95 (br. s, 1H) 9.35 (br. s, 1H). | |
| With hydrogenchloride; In 1,4-dioxane; dichloromethane; at 20℃; for 5h; | To 756.2 mg (4.04 mmol) (S^-hydroxymethyl-azetidine-1-carboxylic acid te/f-butyl ester in 3 mL DCM was added 2 mL (8 mmol) HCI in dioxane (4 M) and the reaction was stirred at room temperature for 5 hours. The solvent evaporated to give the desired product as a HCI salt, which was used for the next step without further purification. |
| With hydrogenchloride; water; at 20℃; for 1h; | [Reference Example 25]; (S)-1-Azetidin-2-ylmethanol hydrochloride; [Show Image] (S)-2-(Hydroxymethyl)-1-azetidinecarboxylic acid tert-butyl ester (4.20 g) was added with concentrated hydrochloric acid (14 ml), and the mixture was stirred at room temperature for 1 hour. The reaction mixture was concentrated under reduced pressure to obtain the title compound (2.68 g) as colorless oil. 1H-NMR (400MHz, d6-DMSO) δ : 2.22-2.38 (2H, m), 3.36 (1H, brs), 3.70-3.74 (1H, m), 3.78-3.85 (1H, m), 4.34-4.36 (1H, m), 5.41-5.43 (1H, m), 8.90 (1H, brs), 9.33 (1H, brs). |

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 78% | With triethylamine; In dichloromethane; at 0 - 20℃; | 2-(S)-Hydroxymethyl-azetidine-1-carboxylic acid tert-butyl ester (prepared as described in Abreo, et al. J. Med. Chem. 1996, 39, 817-825) (9.7 g, 52 mmol) was taken up in dichloromethane (50 mL), treated with triethylamine (8.7 mL, 62 mmol), cooled to 0 C., treated dropwise with methanesulfonyl chloride (4.4 mL, 57 mmol), stirred over night at ambient temperature, treated with sodium bicarbonate solution (50 mL) and the layers were separated. The aqueous layer was extracted with dichloromethane (50 mL). The combined organic layers were dried (MgSO4), filtered, concentrated and chromatographed on silica gel eluding with agradient of 10:1, 5:1, 2:1 and 3:2 hexane:ethyl acetate to provide 10.7 g (78%). 1H NMR (300 MHz, CDCl3) δ 1.45 (s, 9 H) 2.27 (m, 2 H) 3.05 (s, 3 H) 3.82 (m, 2 H) 4.28 (dd, J=10.85, 2.71 Hz, 1 H) 4.43 (m, 1 H) 4.54 (dd, J=10.85, 4.07 Hz, 1 H). |
| 78% | With triethylamine; In dichloromethane; at 0 - 20℃; | 2-(S)-Hydroxymethyl-azetidine-1-carboxylic acid tert-butyl ester (prepared as described in Abreo, et al. J. Med. Chem. 1996, 39, 817-825) (9.7 g, 52 mmol) was taken up in dichloromethane (50 mL), treated with triethylamine (8.7 mL, 62 mmol), cooled to 0 C., treated dropwise with methanesulfonyl chloride (4.4 mL, 57 mmol), stirred overnight at ambient temperature, treated with sodium bicarbonate solution (50 mL) and the layers were separated. The aqueous layer was extracted with dichloromethane (50 mL). The combined organic layers were dried (MgSO4), filtered, concentrated and chromatographed on silica gel eluting with a gradient of 10:1, 5:1, 2:1 and 3:2 hexane:ethyl acetate to provide 10.7 g (78%). 1H NMR (300 MHz, CDCl3) ? 1.45 (s, 9H) 2.27 (m, 2H) 3.05 (s, 3H) 3.82 (m, 2H) 4.28 (dd, J=10.85, 2.71 Hz, 1H) 4.43 (m, 1H) 4.54 (dd, J=10.85, 4.07 Hz, 1H). |
[ 130115-85-4 ]
[ 161511-85-9 ]
[ 1972-28-7 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With triphenylphosphine; In tetrahydrofuran; | 66a. 5-Bromo-6-chloro-3-(1-BOC-2-(S)-azetidinylmethoxy)pyridine (50722-136) To a solution of diethyl azodicarboxylate (1.52 mL, 9.6 mmol) in THF (56 mL) was added triphenylphosphine (2.52 g, 9.6 mmol) at 0 C., and the reaction mixture was stirred for half an hour. 1-BOC-2-(S)-azetidinemethanol (1.44 g, 7.7 mmol) and 5-bromo-6-chloropyridine-3-ol (1.4 g, 6.4 mmol; prepared according to V. Koch and S. Schnatterer, Synthesis 1990, 499-501)) were then added. The reaction mixture was slowly warmed up to room temperature overnight. Solvent was removed, and the residue was chromatographed on a silica gel column, eluding with chloroform:methanol 100:1 to afford the title compound. MS (DCI/NH3) m/z 377, 379 (M+H)+. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; | 54b. 5-bromo-3-(1-BOC-2-(S)-azetidinylmethoxy)pyridine Triphenylphosphine (4.01 g, 15.3 mmol) and DEAD (2.43 mL, 15.3 mmol) were dissolved in 30 mL of THF at 0 C., and the mixture was stirred for for 10 minutes. Samples of 1-BOC-2-(S)-azetidinemethanol (2.86 g, 15.3 mmol), prepared as described above, and 5-bromo-3-hydroxypyridine (1.505 g, 10.2 mmol) were added, and the reaction rnixture was stirred for 40 hours at room temperature. The volatiles were removed under vacuum, and the residue was triturated with hexane. The hexane was removed, and the residue was chromatographed on a silica gel column, eluding with hexane:Et2 O 10:1 to 10:2 to afford the title compound as a colorless oil (1.669 g). MS (CI/NH3) m/z 344 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ1.42 (s, 9H), 2.31 (m, 2H), 3.89 (m, 2H), 4.12 (m, 1H), 4.322 (m, 1H), 4.52 (m, 1H), 7.43 (m, 1H), 8.29 (m, 2H). | |
| With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; | 54b. 5-bromo-3-(1-BOC-2-(S)-azetidinylmethoxy)pyridine Triphenylphosphine (4.01 g, 15.3 mmol) and DEAD (2.43 mL, 15.3 mmol) were dissolved in 30 mL of THF at 0 C., and the mixture was stirred for for 10 minutes. Samples of 1-BOC-2-(S)-azetidinemethanol (2.86 g, 15.3 mmol), prepared as described above, and 5-bromo-3-hydroxypyridine (1.505 g, 10.2 mmol) were added, and the reaction mixture was stirred for 40 hours at room temperature. The volatiles were removed under vacuum, and the residue was triturated with hexane. The hexane was removed, and the residue was chromatographed on a silica gel column, eluding with hexane:ether 10:1 to 10:2 to afford the title compound as a colorless oil (1.669 g). MS (CI/NH3) m/z 344 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ1.42 (s, 9H), 2.31 (m, 2H), 3.89 (m, 2H), 4.12 (m, 1H), 4.322 (m, 1H), 4.52 (m, 1H), 7.43 (m, 1H), 8.29 (m, 2H). |
[ 161511-85-9 ]
[ 1972-28-7 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With triphenylphosphine; In tetrahydrofuran; | 196e 3-(1-BOC-2-(S)-azetidinylmethoxy)-5-bromo-6-methyl-pyridine Triphenylphosphine (6.3 g, 24 mmol) was dissolved in THF (100 mL), cooled to 0 C. and treated with diethylazodicarboxylate (3.8 mL, 24 mmol) for 15 min. Then the compound of 196d (3 g, 16 mmol) followed by 1-BOC-2-(S)-azetidinemethanol (3.4 g, 18 mmol) was added and the reaction was allowed to warm slowly to ambient temperature. After 3 days, the solvent was evaporated and the crude residue was chromatographed (silica gel; hexanes/EtOAc, 4:1) to provide an oil. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 39% | With triphenylphosphine; diethylazodicarboxylate; | 109b. 5,6-Dichloro-3-(1-t-butyloxycarbonyl-2-(S)-azetidinylmethoxy)pyridine N-Boc-2-(S)-azetidinol from Example 7b (1.55 g, 8.28 mmol), triphenylphosphine (2.6 g, 9.94 mmol), DEAD (1.6 mL, 9.94 mmol), and 5,6-dichloro-3-hydroxypyridine (1.5 g, 9.10 mmol) were allowed to react as in Example 9. The crude product was chromatographed eluding with EtOAc:hexane (1:5) to give 1.08 g of a waxy solid, 39% yield. MS (CI) m/e 333 (M+H)+. 1 H NMR (CDCl3, 300 MHz) d 7.97 (d, J=2.8 Hz, 1H), 7.41 (d, J=2.8 Hz, 1H), 4.56-4.48 (m, 1H), 4.40-4.30 (m, 1H), 4.12 (dd, J=10.1, 2.7 Hz, 1H-), 3.95-3.82 (m, 2H), 2.42-2.22 (m, 2H), 1.42 (s, 9H). |
| 39% | With triphenylphosphine; diethylazodicarboxylate; | 109b. 5,6-Dichloro-3-(1-t-butyloxycarbonyl-2-(S)-azetidinylmethoxy)pyridine N-Boc-2-(S)-azetidinol from Example 7b (1.55 g, 8.28 mmol), triphenylphosphine (2.6 g, 9.94 mmol), DEAD (1.6 mL, 9.94 mmol), and 5,6-dichloro-3-hydroxypyridine (1.5 g, 9.10 mmol) were allowed to react as in Example 9. The crude product was chromatographed eluding with EtOAc:hexane (1:5) to give 1.08 g of a waxy solid, 39% yield. MS (CI) m/e 333 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ: 7.97 (d, J=2.8 Hz, 1H), 7.41 (d, J=2.8 Hz, 1H), 4.56-4.48 (m, 1H), 4.40-4.30 (m, 1H), 4.12 (dd, J=10.1, 2.7 Hz, 1H), 3.95-3.82 (m, 2H), 2.42-2.2 (m, 2H), 1.42 (s, 9H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 76% | In hexane; ethyl acetate; mineral oil; | 13a. 3-((1-BOC-2(S)-azetidinyl)methoxy)chloro-pyridazine The compound from Example 7b (3.18 g, 17.0 mmol), sodium hydride (80% dispersion in mineral oil, 510 mg, 17.0 mmol), and 3,6-dichloropyridazine (3.8 g, 25.5 mmol) were combined in a similar manner as that described in Example 7c. The crude product was purified by flash chromatography on silica gel using EtOAc/hexane (1:6 to 1:4) as the elutant to give 3.87 g of a viscous oil, which solidified in the refrigerator (76% yield). TLC Rf =0.58 (EtOAc/hexane 1:1). mp.=50-54 C. MS (CI) m/e 300 (M+H)+. 1 H NMR (DMSO-d6, 300 MHz) δ: 7.73 (d, J=9.2 Hz, 1H), 7.31 (d, J=9.2 Hz, 1H), 4.72 (dd, J=11.0 Hz, 4.6 Hz, 1H), 4.59 (dd, J=11.0 Hz, 3.7 Hz, 1H), 4.56-4.50 (m, 1H), 3.79 (t, J=7.6 Hz, 2H), 2.40-2.38 (m, 1H), 2.20-2.09 (m, 1H), 1.36 (s, 9H). |
[ 1121-25-1 ]
[ 161511-85-9 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 55% | 29a. 2-methyl-3-((1-t-Butoxycarbonyl-2-(S)-azetidinyl)methoxy)pyridine An ice-cooled solution of 1-t-butoxycarbonyl-2-(S)-azetidinemethanol (from Example 7b, 0.623 g, 3.33 mmol) was allowed to react with 2-methyl-3-hydroxypyridine (0.399 g, 3.66 mmol) under the conditions of Example 2a to yield the title compound (0.511 g, 55%). MS (DCI/NH3) m/e: 279 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ: 8.10 (dd, J=4.4, 1.5 Hz, 1H), 7.15-7.06 (m, 2H), 4.54-4.53 (m, 1H), 4.35-4.34 (m, 1M), 4.07 (dd, J=10.3, 2.6 Hz, 1H), 3.96-3.88 (m, 2H), 2.51 (s, 3H), 2.42-2.31 (m, 2H), 1.40 (s, 9H). | |
| 55% | 29a. 2-methyl-3-((1-t-Butoxycarbonyl-2-(S)-azetidinyl)methoxy)pyridine An ice-cooled solution of 1-t-butoxycarbonyl-2-(S)-azetidinemethanol (from Example 7b, 0.623 g, 3.33 mmol) was allowed to react with 2-methyl-3-hydroxypyridine (0.399 g, 3.66 mmol) under the conditions of Example 2a to yield the title compound (0.511 g, 55%). MS (DCI/NH3) m/e: 279 (M+H)+. 1 H NMR (CDCl3, 300 MHz) δ: 8.10 (dd, J=4.4, 1.5 Hz, 1H), 7.15-7.06 (m, 2H), 4.54-4.53 (m, 1H), 4.35-4.34 (m, 1H), 4.07 (dd, J=10.3, 2.6 Hz, 1H), 3.96-3.88 (m, 2H), 2.51 (s, 3H), 2.42-2.31 (m, 2H), 1.40 (s, 9H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 36% | 40a. 6-methyl-3-(N-t-Butoxycarbonyl-2-(S)-azetidinylmethoxy)pyridine An ice cooled solution of the compound from Example 7b (0.232 g, 1.24 mmol) was allowed to react with 3-hydroxy-2-methylpyridine (Aldrich, 0.142 g, 130 mmol) under the conditions of Example 2a, except that DEAD was replaced with di-t-butylazodicarbonate to yield the title compound (0.123 g, 36%) after purification on silica gel (ethyl acetate/hexane 2:1). MS (DCI/NH3) m/e: 279 (M+H)+. 1 H NMR (CDCl3,300 MHz) δ: 8.23-8.22 (d, J=2.6 Hz, 1H), 7.20 (dd, J=8.5, 3.0 Hz, 1H), 7.08 (d, J=8.5 Hz, 1H), 4.51-4.49 (m, 1H), 4.30-4.28 (m, 1H), 4.13 (dd, J=9.9,2.9 Hz, 1H), 3.89 (t, J=7.75 Hz, 2H), 2.51 (s, 3H), 2.37-2.28 (m, 2H), 1.41 (s, 9H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 97.0% | With sodium bicarbonate; sulfuric acid; magnesium chloride; In tetrahydrofuran; water; ethyl acetate; toluene; | EXAMPLE 5 Synthesis of (S)-N-t-butoxycarbonylazetidine-2-methanol (Effect of Addition of t-butylmagnesium Chloride and Magnesium Chloride) STR12 In a nitrogen gas atmosphere, a reaction flask was charged with the isopropyl (2S)-4-oxo-2-azetidinecarboxylate obtained in Reference Example 2 (5.00 g, 31.8 mmol), magnesium chloride (4.54 g, 47.8 mmol) and THF (50 mL) and while maintaining the temperature of this solution at 5 to 15 C., t-butylmagnesium chloride (2 M solution in THF, 15.9 mL, 31.8 mmol) was added, followed by 1.5 hours of further stirring at that temperature. While maintaining the temperature of that solution at 5 to 15 C., a solution of lithium aluminum hydride (1.81 g, 47.8 mmol) in THF (10 mL) was added and, thereafter, the mixture was heated under reflux with stirring for 6 hours. The reaction mixture was then cooled to 5 C., water (100 mL) was added, and the mixture was further stirred at room temperature for 0.5 hour. This solution of (S)-azetidine-2-methanol was adjusted to pH 10 by adding 10% sulfuric acid, sodium hydrogen carbonate (3.37 g, 31.8 mmol) was then added, and di-t-butyl dicarbonate (7.63 g, 35.0 mmol) was added at room temperature. Thereafter, stirring was continued for 14 hours. The reaction mixture was adjusted to pH 7 and extracted with ethyl acetate (50 mL*2), and the extract was washed with water (50 mL*1), dried over magnesium sulfate and filtered. The filtrate was concentrated and subjected to column chromatography (Wakogel C-200) using toluene/ethyl acetate (1/1) as a mobile phase for separation/purification, to give an oil (5.77 g). Based on its proton NMR spectrum (FIG. 5), said oil was identified as the desired product (S)-N-t-butoxycarbonylazetidine-2-methanol (yield 97.0%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With sodium hypochlorite; sodium bicarbonate; sulfuric acid; cyfluthrin; sodium thiosulfate; sodium bromide; In water; ethyl acetate; | EXAMPLE 10 Synthesis of (S)-N-t-butoxycarbonylazetidine-2-carboxylic Acid STR15 A reaction flask was charged with the (S)-N-t-butoxycarbonylazetidine-2-methanol (2.97 g, 15.9 mmol) obtained in Example 5, TEMPO (25.0 mg, 0.159 mmol), NaBr (4.94 g, 47.7 mmol), ethyl acetate (35 mL) and water (7 mL). Thereto was added, at 5 to 10 C., a mixture of an aqueous solution of sodium hypochlorite (Nakalai Tesque, 80 mL) and sodium hydrogen carbonate (4.68 g, 55.7 mmol). Stirring was further continued for 3 hours. Sodium thiosulfate (0.79 g, 5.06 mmol) was added to the reaction mixture, and the mixture was stirred for 5 minutes. Then, the reaction mixture was adjusted to pH 2 by adding 10% sulfuric acid and extracted with ethyl acetate (50 mL*2), the organic layer was washed with water (50 mL*2), dried over magnesium sulfate and filtered, and the filtrate was concentrated to give white crystals (3.18 g). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 2.18 g (94%) | With hydrogenchloride; borane; In tetrahydrofuran; sodium carbonate; | N-t-Butoxycarbonyl-2(S)-hydroxymethylazetidine Azetidine-2-carboxylic acid (1.25 g, 12.4 mmol) was dissolved in 10 mL of 2M aqueous sodium carbonate and a solution of di-tert-butyldicarbonate in 10 mL of THF was added and the mixture was stirred overnight. The mixture was diluted with water and ether and the layers were separated. The ether layer was washed with water and pH of the combined aqueous phases adjusted to ~2 with phosphoric acid. The mixture was extracted with 4 portions of 20% isopropanot/chloroform and the combined organic phases were dried, filtered and concentrated. The residue was dissolved in 15 mL of THF and cooled in an ice bath. The solution was treated with 25 mL of borane in THF (1M, 25 mmol) and stirring was continued for 1 hour. The ice bath was removed and the solution stirred for 2 hours and then quenched by the careful addition of 25 mL of 4:1 THF/water. The mixture was stirred for 15 minutes, carefully treated with 25 mL of 1N aqueous HCl, and diluted with ethyl acetate. The layers wre separated and the aqueous layer extracted with 2 additional portions of ethyl acetate. The combined organic fractions were washed with 2M aqueous sodium carbonate, water, brine, and dried, filtered and concentrated to provide 2.18 g (94%) of the title compound. MS (DCI, NH3): 188 (MH+). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 83% | With sodium hydroxide;tetra(n-butyl)ammonium hydrogensulfate; In water; toluene; at 0 - 20℃; for 1h; | tert-butyl 2-bromoacetate (0.799 ml, 5.45 mmol) was added at room temperature to a mixture of tetra-n-butylammonium hydrogen sulfate (122 mg, 0.363 mmol), aqueous sodium hydroxide solution (7.27 g, 181.7 mmol in water (7 ml)) and toluene (5 ml), and the mixture was then cooled to 0 C. A solution of <strong>[161511-85-9](S)-tert-butyl 2-(hydroxymethyl)azetidine-1-carboxylate</strong> (680 mg, 3.63 mmol) in toluene (5 ml) was then added slowly. The reaction mixture was heated to room temperature and stirred for 1 h at that temperature. The phases were separated, and the aqueous phase was extracted with diethyl ether (2×20 ml). The combined organic phases were washed with saturated sodium chloride solution (20 ml), dried (Na2SO4) and concentrated in vacuo. The crude product was purified by column chromatography (silica gel) using hexane/diethyl ether/dichloromethane (2:1:1). Yield: 910 mg (83%) |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 93% | With sodium hydride; In N,N-dimethyl-formamide; at 0 - 20℃; for 1h; | (S)-1-(tert-butoxycarbonyl)azetidine-2-methanol (5) (8.03 g, 42.9 mmol) was introduced into a 200-mL pear-shaped flask, and N,N-dimethylformamide (60 mL) was added to dissolve the compound. Methyl iodide (5.34 mL, 85.8 mmol) was added thereto. While stirring the content under ice cooling, sodium hydride (commercial product, purity 55%) (2.81 g, 64.3 mmol) was slowly added, and the mixture was stirred for one hour at room temperature. The reaction liquor was transferred to ice water, and the mixture was extracted with ethyl acetate (250 mLx2). The extract was dried over anhydrous sodium sulfate. After filtering the extract, the filtrate was concentrated under reduced pressure, and azeotropically boiled with toluene. The obtained concentrated residue was subjected to flash column chromatography (column size: 40M) manufactured by Biotage AB, and the fraction obtained from an elution with n-hexane:ethyl acetate (4:1, v/v) was concentrated under reduced pressure and dried, to obtain the title compound (8.05 g, 40.0 mmol, 93%) as a solid. NMR(CDCl3)δ:1.44(9H,s),2.11-2.27(2H,m),3.41-3.41(3H,m),3.55(1H,d,J=3.1Hz),3.62-3.69(1H,m),3.82(2H,t,J=8.1Hz),4.27-4.34(1H,m). MS(ESI)m/z:102(M++1-Boc). |
| Step 1: (S)-2-(Methoxymethyl)-1-azetidinecarboxylic acid tert-butyl ester; 60% Sodium hydride (240 mg) was suspended in N,N-dimethylformamide (12 ml), and the suspension was cooled on ice under a nitrogen atmosphere. The suspension was added dropwise with a solution of (2S)-2-(hydroxymethyl)-1-azetidinecarboxylic acid tert-butyl ester (936 mg) dissolved in N,N-dimethylformamide (6 ml), and then stirred for 20 minutes. Then, the reaction mixture was added with methyl iodide (0.40 ml), returned to room temperature, and stirred overnight. The reaction mixture was added with cooled saturated aqueous ammonium chloride, and extracted with ethyl acetate. The organic layer was washed with saturated brine, and dried over anhydrous sodium sulfate, and then the solvent was evaporated under reduced pressure. The resulting residue was purified by silica gel chromatography [developing solvent; ethyl acetate:n-hexane=1:4 (v/v)] to obtain the title compound (910 mg) as colorless oil. 1 H-NMR (400MHz, CDCl3) δ : 1.44 (9H, s), 2.11-2.27 (2H, m), 3.41 (3H, s), 3.54 (1H, dd, J=10, 3.2Hz), 3.65 (1H, dd, J=10, 5.4Hz), 3.81 (2H, dd, J=8.2, 6.9Hz), 4.27-4.33 (1H, m). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| In dichloromethane; at 20℃; | Part A: (2S)-2-Azetidinylmethanol, TFA salt. Commerically-available (S)-1-(t-butoxycarbonyl)-2-azetidinemethanol (100 mg, 5.3 mmol) was dissolved and stirred in dichloromethane (2 mL). Trifluoroacetic acid (1 mL) was added dropwise, and the resulting reaction mixture was stirred at room temperature until removal of the t-butoxycarbonyl group was complete. Then the solvent was evaporated and the crude, TFA salt of (2S)-2-azetidinylmethanol was used directly in the next step. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 54% | With triphenylphosphine; diethylazodicarboxylate; In tetrahydrofuran; | The copper I mediated conversion of 3 -Bromo-5 -hydroxy pyridine (3) to 3-azido-5- hydroxy pyridine (6) was accomplished in 40% yield according to the method of Liang and co-workers. Etherification with alcohol 2 under Mitsunobu conditions then gave the product 7 in 54% yield. Coupling of the azide functionality with 5-hexyn-l-ol by [3+2]Huisgen cycloaddition was accomplished using the Sharpless click chemistry methodology to give protected triazetidine O in 99% yield. Deprotection with HCl-Et2O solution followed by a basic work-up with NH4OH gave triazetidine O as a white solid (mp = 180- 181 0C). The physical properties of triazetidiene O is a major improvement over sazetidineA. As noted above, a melting point of greater than 150 0C is necessary for a drug to be manufacturable, and triazetidine O meets this requirement. <n="44"/>AtIy Docket No.: GUX-023.25NMR and MS data for triazetidine O: 1H NMR (CD3OD): 1.58-1.65 (m, 2H), 1.76- 1.84 (m, 2H), 1.91 (s, IH), 2.67-2.70 (m, 2H), 2.82 (t, J = 7.4 Hz, 2H), 3.28-3.30 (m, 2H), 3.60 (t, J = 6.5 Hz, 2H), 4.08-4.16 (m, 2H), 4.51-4.63 (m, 2H), 8.05-8.07 (m, IH), 8.48 (d, J = 2.4 Hz, IH), 8.57 (s, IH), 8.77 (d, J = 1.9 Hz, IH); 13C NMR: 20.4, 24.6, 25.3, 31.6, 43.4, 58.9, 61.1, 67.3, 113.5, 120.6, 133.4, 134.5, 137.7, 149.0, 155.0. TOF-MS obsd 304.1765 (M + H)+, calcd 303.1695 [M = Ci5H20N2O2]. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | Example 2Atert-butyl (2S)-2-[2-[(2Z)-5-tert-butyl-3-[(2R)-tetrahydrofuran-2-ylmethyl]-1,3-thiazol-2(3H)-ylidene]carbamoyl}-4-(trifluoromethyl)phenoxy]methyl}azetidine-1-carboxylateThe mixture of <strong>[161511-85-9](S)-tert-butyl 2-(hydroxymethyl)azetidine-1-carboxylate</strong> (374 mg, 2.0 mmol) and sodium tert-butoxide (192 mg, 2.0 mmol) in THF (10 mL) was stirred at ambient temperature for 10 minutes, then Example 1A (430 mg, 1.0 mmol) was added. The mixture was stirred for another 1 hour and monitored by LC/MS. The reaction was quenched with saturated aqueous NH4Cl and extracted by EtOAc (3×10 mL). The combined organic layer was washed with brine and concentrated. Purification by flash chromatography (silica gel, 5-30% solvent A in EtOAc, solvent A: MeOH (10):Et3N (1)) afforded 538 mg (90%) of the title compound. 1H NMR (300 MHz, DMSO-d6) δ ppm 1.29-1.32 (m, 9H), 1.37 (s, 9H), 1.51-2.31 (m, 6H), 3.42-3.85 (m, 5H), 4.06-4.30 (m, 3H), 4.42-4.45 (m, 2H), 4.70-4.74 (m , 1H), 7.20-7.37 (m, 2H), 7.74 (dd, J=8.92, 2.18 Hz, 1H), 7.99 (d, J=2.38 Hz, 1H); MS (ESI) m/z 598 (M+H)+. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 43% | To a solution of <strong>[161511-85-9](S)-tert-butyl 2-(hydroxymethyl)azetidine-1-carboxylate</strong> (available as described in Abreo et al. J. Med. Chem. 1996, 39, 817-825; 0.096 g, 0.52 mmol) in THF (5 mL) was added potassium tert-butoxide (0.11 g, 0.94 mmol). This mixture was stirred at ambient temperature for 20 min then the product of Example 1E (0.2 g, 0.47 mmol) in THF (5 mL) was added via cannula. This mixture was stirred at ambient temperature for 4 h then the mixture was quenched with saturated, aqueous NaHCO3 (5 mL) and diluted with EtOAc (5 mL). The layers were separated and the aqueous layer was extracted with EtOAc (3×5 mL). The combined organics were dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure and purified via column chromatography (SiO2, 100% EtOAc to 10% MeOH in EtOAc) to give the title compound (0.12 g, 0.20 mmol, 43% yield). MS (DCI/NH3) m/z 595 (M+H)+ | |
| 43% | To a solution of <strong>[161511-85-9](S)-tert-butyl 2-(hydroxymethyl)azetidine-1-carboxylate</strong> (available as described in Abreo et al. J. Med. Chem. 1996, 39, 817-825; 0.096 g, 0.52 mmol) in THF (5 mL) was added potassium tert-butoxide (0.11 g, 0.94 mmol). This mixture was stirred at ambient temperature for 20 min then the product of Example 1E (0.2 g, 0.47 mmol) in THF (5 mL) was added via cannula. This mixture was stirred at ambient temperature for 4 h then the mixture was quenched with saturated, aqueous NaHCO3 (5 mL) and diluted with EtOAc (5 mL). The layers were separated and the aqueous layer was extracted with EtOAc (3×5 mL). The combined organics were dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure and purified via column chromatography (SiO2, 100% EtOAc to 10% MeOH in EtOAc) to give the title compound (0.12 g, 0.20 mmol, 43% yield). MS (DCI/NH3) m/z 595 (M+H)+ |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 90% | With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In toluene; at 20℃;Cooling with ice; | l,l'-(Azodicarbonyl)dipiperidine (253 mg, 1.00 mmol, 1.6 equiv.) was dissolved in 2 mL of toluene (dried with molecular sieve 3A) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (248 μL, 1.00 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and was stirred for 10 min. The colorless solution formed was then transferred dropwise (via syringe) with ice cooling into a solution of l-(te/t-butoxycarbonyl)-2(.R)- azetidinylmethanol (188 mg, 1.00 mmol, 1.6 equiv.) and 5-[(lS,2S)-2- (phenoxymethyl)cyclopropyl]-3-pyridinol (151 mg, 626 μmol) in a 25 mL round-bottom flask equipped with a magnetic stirrer and an Ar balloon. The resulting mixture was warmed to room temperature and stirred overnight. The reaction was quenched by addition of saturated NaHCO3 solution (10 mL). The product was extracted into EtOAc (3 x 20 mL). The combined organic phases were dried over Na2SO4 and concentrated. The residue was purified by CC on SiO2 (25 x 2.5 cm, EtOAc/hexanes 2:1) to give the crude product, which was further purified by preparative HPLC in two portions (Supelco Discovery C18, 250 x 21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 niL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 29.1-31.1 min) to give the title compound as a yellowish oil (231 mg, 90%). MS (EI) mlz 410 (M+, 0.1%). |
| 90% | With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In water; toluene; at 20℃; for 0.166667h;Molecular sieve; Inert atmosphere; Cooling with ice; | 3-[[1-(tert-Butoxycarbonyl)-2(S)-azetidinyl]methoxyl]-5-[(1S,2S)-2-(phenoxymethyl)cyclopropyl]pyridine 1,1'-(Azodicarbonyl)dipiperidine (253 mg, 1.00 mmol, 1.6 equiv.) was dissolved in 2 mL of toluene (dried with molecular sieve 3 Å) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (248 μL, 1.00 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and was stirred for 10 min. The colorless solution formed was then transferred dropwise (via syringe) with ice cooling into a solution of 1-(tert-butoxycarbonyl)-2(R)-azetidinylmethanol (188 mg, 1.00 mmol, 1.6 equiv.) and 5-[(1S,2S)-2-(phenoxymethyl)cyclopropyl]-3-pyridinol (151 mg, 626 μmol) in a 25 mL round-bottom flask equipped with a magnetic stirrer and an Ar balloon. The resulting mixture was warmed to room temperature and stirred overnight. The reaction was quenched by addition of saturated NaHCO3 solution (10 mL). The product was extracted into EtOAc (3*20 mL). The combined organic phases were dried over Na2SO4 and concentrated. The residue was purified by CC on SiO2 (25*2.5 cm, EtOAc/hexanes 2:1) to give the crude product, which was further purified by preparative HPLC in two portions (Supelco Discovery C18, 250*21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 mL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 29.1-31.1 min) to give the title compound as a yellowish oil (231 mg, 90%). MS (EI) m/z 410 (M+, 0.1%). |
[ 1222138-09-1 ]
[ 161511-85-9 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 79% | With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In water; toluene; acetonitrile; at 20℃; for 2.16667h;Molecular sieve; Inert atmosphere; Cooling with ice; | 1,1'-(Azodicarbonyl)dipiperidine (207 mg, 0.82 mmol, 1.6 equiv.) was dissolved in 2.0 mL of toluene (dried with molecular sieve 3 Å) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (203 μL, 0.82 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and stirred for 10 min. The resulting colorless solution was then added dropwise (via syringe) with ice cooling to a solution of 5-[(1S,2S)-2-(benzyloxymethyl)cyclopropyl]-3-pyridinol (131 mg, 0.51 mmol) and <strong>[161511-85-9]1-(tert-butoxycarbonyl)-2(S)-azetidinylmethanol</strong> (154 mg, 0.82 mmol, 1.6 equiv.) in a 25 mL round-bottom flask (equipped with a magnetic stirrer and an Ar balloon). The resulting mixture was warmed to room temperature and stirred overnight. Air was bubbled through the mixture for 2 h. The solvent was evaporated, and the residue was purified by CC on SiO2 (15*1.0 cm, EtOAc) to give the crude product, which was further purified by preparative HPLC (Supelco Discovery C18, 250*21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 mL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 28.5-30.9 min) to give a colorless oil (170 mg, 79%). MS (EI) ink 424 (M+, 0.5%). |
| With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In toluene;Cooling with ice; | l,l'-(Azodicarbonyl)dipiperidine (207 mg, 0.82 mmol, 1.6 equiv.) was dissolved in 2.0 mL of toluene (dried with molecular sieve 3A) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (203 μL, 0.82 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and stirred for 10 min. The resulting colorless solution was then added dropwise (via syringe) with ice cooling to a solution of 5-[(lS,2S)-2- (benzyloxymethyl)cyclopropyl]-3-pyridinol (131 mg, 0.51 mmol) and -(tert- butoxycarbonyl)-2(S)-azetidinylmethanol (154 mg, 0.82 mmol, 1.6 equiv.) in a 25 mL round- bottom flask (equipped with a magnetic stirrer and an Ar balloon). The resulting mixture was warmed to room temperature and stirred overnight. Air was bubbled through the mixture for 2 h. The solvent was evaporated, and the residue was purified by CC on SiO2 (15 x 1.0 cm, EtOAc) to give the crude product, which was further purified by preparative HPLC (Supelco Discovery C18, 250 x 21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 niL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 28.5-30.9 min) to give a colorless oil (170 mg, 79%). MS (EI) mlz 424 (M+, 0.5%) |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 70% | With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In toluene; at 20℃;Cooling with ice; | l,l'-(Azodicarbonyl)dipiperidine (218 mg, 0.86 mmol, 1.6 equiv.) was dissolved in 2.5 mL of toluene (dried with molecular sieve 3A) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (213 μL, 0.86 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and stirred for 10 min. The colorless solution formed was then added dropwise (via syringe) with ice cooling to a solution of 5-[(lS,2S)-2-[(2- pyridylmethoxy)methyl]cyclopropyl]-3-pyridinol (138 mg, 0.54 mmol, evaporated three times with 5 rnL of toluene each time) and l-(?ert-butoxycarbonyl)-2(lSr)-azetidinylmethanol (162 mg, 0.86 mmol, 1.6 equiv.) in a 25 mL round-bottom flask (equipped with a magnetic stirrer and an Ar balloon). The resulting mixture was warmed to room temperature and stirred overnight. Air was bubbled through the mixture for 3 h. The solvent was evaporated, and the residue was purified by CC on SiO2 (1O x 1.0 cm, EtOAc) to give the crude product, which was further purified by preparative HPLC in 3 portions (Supelco Discovery C18, 250 x 21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 niL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 21.9-23.1 min) to give the product as a colorless oil (161 mg, 70%). [α]s46 -143; [α]s89 -120 (c 8.55 g/L, EtOAc). 1H NMR (CDCl3, 500 MHz) δ 8.57 (d, IH, J = 4.9 Hz), 8.15 (d, IH, J = 2.7 Hz), 8.07 (s, IH), 7.71 (td, IH, J = 7.7, 1.8 Hz), 7.48 (d, IH, J = 7.8 Hz), 7.21 (dd, IH, J = 7.0, 5.4 Hz), 6.88 (d, IH, J= 2.0 Hz), 4.70 (s, 2H), 4.56-4.49 (m, IH), 4.31 (s, br, IH), 4.13 (dd, IH, J = 9.9, 2.9 Hz), 3.95-3.88 (m, 2H), 3.65 (dd, IH, J = 10.5, 6.4 Hz), 3.60 (dd, IH, J = 10.4, 6.7 Hz), 2.42-2.33 (m, IH), 2.33-2.24 (m, IH), 1.87 (dt, IH, J = 8.0, 5.7 Hz), 1.58-1.50 (m, IH), 1.43 (s, 9H), 1.08-1.01 (m, 2H). MS (EI) mlz 425 (M+, 7.0%). |
| 70% | With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In toluene; at 20℃;Cooling with ice; Molecular sieve; Inert atmosphere; | 3-[[1-(tert-Butoxycarbonyl)-2(S)-azetidinyl]methoxy]-5-[(1S,2S)-2-[(2-pyridylmethoxy)methyl]cyclopropyl]pyridine 1,1'-(Azodicarbonyl)dipiperidine (218 mg, 0.86 mmol, 1.6 equiv.) was dissolved in 2.5 mL of toluene (dried with molecular sieve 3 Å) in a 10 mL round-bottom flask with a side neck. The flask was equipped with rubber septa and a magnetic stirrer. The atmosphere was exchanged with Ar (3 times), and the flask was cooled with an ice bath. Tributylphosphine (213 μL, 0.86 mmol, 1.6 equiv.) was added dropwise. The mixture was warmed to room temperature and stirred for 10 min. The colorless solution formed was then added dropwise (via syringe) with ice cooling to a solution of 5-[(1S,2S)-2-[(2-pyridylmethoxy)methyl]cyclopropyl]-3-pyridinol (138 mg, 0.54 mmol, evaporated three times with 5 mL of toluene each time) and <strong>[161511-85-9]1-(tert-butoxycarbonyl)-2(S)-azetidinylmethanol</strong> (162 mg, 0.86 mmol, 1.6 equiv.) in a 25 mL round-bottom flask (equipped with a magnetic stirrer and an Ar balloon). The resulting mixture was warmed to room temperature and stirred overnight. Air was bubbled through the mixture for 3 h. The solvent was evaporated, and the residue was purified by CC on SiO2 (10*1.0 cm, EtOAc) to give the crude product, which was further purified by preparative HPLC in 3 portions (Supelco Discovery C18, 250*21.2 mm, 5 μm particle size, UV detection at 270 nm, flow rate 12.5 mL/min, gradient from 20% to 100% CH3CN in water within 40 min, then 100% CH3CN for 20 min; tR 21.9-23.1 min) to give the product as a colorless oil (161 mg, 70%). [α]546 -143; [α]589 -120 (c 8.55 g/L, EtOAc). 1H NMR (CDCl3, 500 MHz) δ 8.57 (d, 1H, J=4.9 Hz), 8.15 (d, 1H, J=2.7 Hz), 8.07 (s, 1H), 7.71 (td, 1H, J=7.7, 1.8 Hz), 7.48 (d, 1H, J=7.8 Hz), 7.21 (dd, 1H, J=7.0, 5.4 Hz), 6.88 (d, 1H, J=2.0 Hz), 4.70 (s, 2H), 4.56-4.49 (m, 1H), 4.31 (s, br, 1H), 4.13 (dd, 1H, J=9.9, 2.9 Hz), 3.95-3.88 (m, 2H), 3.65 (dd, 1H, J=10.5, 6.4 Hz), 3.60 (dd, 1H, J=10.4, 6.7 Hz), 2.42-2.33 (m, 1H), 2.33-2.24 (m, 1H), 1.87 (dt, 1H, J=8.0, 5.7 Hz), 1.58-1.50 (m, 1H), 1.43 (s, 9H), 1.08-1.01 (m, 2H). MS (EI) m/z 425 (M+, 7.0%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With tributylphosphine; 1,1'-azodicarbonyl-dipiperidine; In toluene; at 0 - 20℃;Cooling with ice; | In a 50 mL side-arm flask with stir bar, septum, and Ar balloon, t-n- butylphosphine (2.89 mL, 11.7 mmol, 1.6 equiv.) was added dropwise in 25 min to a solution of ./VyV-azodicarbonyldipiperidine (2.95 g, 11.7 mmol, 1.6 equiv.) in anhydrous toluene (25 mL). Stirring was continued at room temperature for 35 min to result in a light-orange solution of the Mitsunobu reagent. In the meantime, crude (llSr,2lSr)-2-(5-hydroxy-3- pyridyl)cyclopropylmethyl isobutyrate (1.78 g as weighed after the initial evaporation, no more than 7.34 mmol due to residual solvent content) and l-(?er?-butoxycarbonyl)-(2lSr)- azetidinylmethanol (2.20 g, 11.7 mmol, 1.6 equiv.) were placed in a 300 mL round-bottom flask equipped with two-neck adapter, septum, and an Ar balloon. The starting materials were dissolved in anhydrous toluene (25 mL), and the solution was cooled in an ice bath. The Mitsunobu reagent was taken up in a syringe and added dropwise in 40 min. A precipitate began to form after addition of approx. one third of the reagent, and the mixture turned highly viscous. Stirring of the mixture at 0 0C for 80 min resulted in little conversion, whereon the reaction was allowed to proceed at room temperature for 6 h. Shortly before termination of the reaction, a TLC was taken (silica gel, EtOAc/hexane 3:1). The product was observed at Rf 0.42 (UV- and KMnO4-active) preceded by residual N-(tert-butoxycaibonyY)-(2S)- azetidinylmethanol (R{ 0.48, UV-inactive, slowly staining with KMnO4 on heating). Byproducts derived from the Mitsunobu reagent stayed near the baseline. [00969] The reaction mixture was diluted with toluene (20 mL), and air was bubbled through for 100 min (to oxidize any potentially remaining tributylphosphine to the polar phosphine oxide). Then the mixture was evaporated and the residue chromatographed on silica gel (43 x 7.5 cm, EtOAc/hexane 35:65). A total volume of approx. 16 L (including the amount used to fill the column) was required to completely elute the excess oN-{tert- butoxycarbonyl)-(2lSr)-azetidinylmethanol. The product was subsequently eluted with EtOAc/hexane 3:2. Evaporation and drying (50 C/oil pump) yielded 2.83 g (95% over both the hydrogenolysis and Mitsunobu steps) of a yellowish syrup. [α]o -106.5, [α]s46 -127 (c 11.7 g/L, EtOAc). 1H NMR (CDCl3, 500 MHz) δ 8.16 (d, IH, J = 2.7 Hz), 8.07 (s, IH), 6.88 (d, IH, J = 1.9 Hz), 4.53 (m, IH), 4.32 (m, IH), 4.17-4.11 (m, 2H, including the low-field part of an ABq), 4.06 (high-field part of an ABq, IH, J = 11.5 Hz, d with J = 7.4 Hz), 3.94- 3.89 (m, 2H), 2.60 (septuplet, IH, J= 7.0 Hz), 2.41-2.34 (m, IH), 2.34-2.27 (m, IH), 1.91 (dt, IH, J= 7.0 Hz (t), 4.5 Hz (d)), 1.57-1.47 (m, IH), 1.44 (s, 9H), 1.202 (d, 3H, J = 7.0 Hz), 1.200 (d, 3H, J= 7.0 Hz), 1.06 (t, 2H, 7.1 Hz). MS (EI) m/z 404 (M+, 2.5%), 261 (5.5%), 248 (11%), 236 (5.4%), 160 (8.3%), 156 (5.1%), 148 (5.7%), 146 (7.0%), 130 (4.9%), 114 (8.5%), 113 (12%), 100 (30%), 70 (11%), 57 (100%), 56 (83%), 43 (50%), 41 (47%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| Example 12B; ter?-butyl (25)-2-{r2-{r(22)-5-ter^butyl-3-(2-methylpn)pyl)-1.3-thiazol-2(3H)- ylidenel carbamoyl) -4-(trifluoromethyl)phenoxylmethyl| azetidine- 1 -carboxylate; To a solution of (5)-tert-butyl 2-(hydroxymethyl)azetidine-l-carboxylate (available from Ace Synthesis, 0.55 g, 2.9 mmol) in THF (10 mL) at ambient temperature was added KOt-Bu (0.66 g, 5.9 mmol). The mixture stirred at ambient temperature for 20 min then the product of Example 12A (0.79 g, 2.0 mmol) was added. The mixture was stirred at ambient temperature for 1 h then was quenched with saturated, aqueous NH4Cl (5 mL) and was diluted with EtOAc (10 mL). The layers were separated and the aqueous layer was extracted with EtOAc (3 X 5 mL). The combined organics were dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure and purified via column chromatography (SiO2, 50% hexanes/EtOAc) to provide the still impure title compound (1.4 g) which was carried on without further purification. MS (DCI/NH3) m/z 570 (M+H)+. |

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