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CAS No. : | 636-41-9 | MDL No. : | MFCD02822910 |
Formula : | C5H7N | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | TVCXVUHHCUYLGX-UHFFFAOYSA-N |
M.W : | 81.12 | Pubchem ID : | 12489 |
Synonyms : |
|
Num. heavy atoms : | 6 |
Num. arom. heavy atoms : | 5 |
Fraction Csp3 : | 0.2 |
Num. rotatable bonds : | 0 |
Num. H-bond acceptors : | 0.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 25.76 |
TPSA : | 15.79 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -6.01 cm/s |
Log Po/w (iLOGP) : | 1.33 |
Log Po/w (XLOGP3) : | 1.11 |
Log Po/w (WLOGP) : | 1.32 |
Log Po/w (MLOGP) : | 0.46 |
Log Po/w (SILICOS-IT) : | 2.0 |
Consensus Log Po/w : | 1.24 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 2.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.66 |
Solubility : | 1.78 mg/ml ; 0.0219 mol/l |
Class : | Very soluble |
Log S (Ali) : | -1.03 |
Solubility : | 7.49 mg/ml ; 0.0923 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -1.88 |
Solubility : | 1.08 mg/ml ; 0.0133 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.0 |
Signal Word: | Danger | Class: | 3,6.1 |
Precautionary Statements: | P261-P301+P310-P305+P351+P338 | UN#: | 1992 |
Hazard Statements: | H225-H301-H315-H319-H332-H335 | Packing Group: | Ⅲ |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | Stage #1: With trichlorophosphate In 1,2-dichloro-ethane at 0 - 20℃; for 0.25 h; Stage #2: at 0 - 80℃; for 0.5 h; Stage #3: With water; sodium acetate In 1,2-dichloro-ethane at 80℃; for 0.333333 h; |
DMF (8.54 g, 117 mmol) and dichloroethane (120 mL) were added to a 250-mL 3-necked round-bottom flask fitted with a magnetic stir bar. Phosphoryl chloride (17.9 g, 117 mmol) was added dropwise with stirring at 0° C. The resulting solution was stirred for 15 min at room temperature and then 2-methyl-1H-pyrrole (10.0 g, 123 mmol) was added dropwise with stirring at 0° C. The resulting solution was stirred at 80° C. for 30 min. A solution of sodium acetate (46 g, 561 mmol) in water (130 mL) was then added at room temperature. The resulting solution was stirred for 20 min at 80° C. then cooled to room temperature and quenched with water (100 mL). The resulting solution was extracted with dichloromethane (3×250 mL) and the organic layers were combined and washed with saturate aqueous sodium bicarbonate solution (150 mL). The organic phase was dried over anhydrous sodium sulfate, filtered and concentrated under vacuum. The residue was purified by column chromatography eluting with ethyl acetate/hexane (1:5 v/v) to afford 5-methyl-1H-pyrrole-2-carbaldehyde (7.50 g, 56percent). LCMS (ESI) m/z 110 [M+H]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
18% | Stage #1: for 0.333333 h; Stage #2: for 0.25 h; Heating / reflux Stage #3: With sodium acetate In 1,2-dichloro-ethane at 80℃; for 0.333333 h; |
B. 2-Formyl-5-methyl-pyrrole To 0.54 ml of DMF, with ice cooling and under argon, was added dropwise 0.64 ml of POCl3. The reaction, which solidified during the addition, was warmed lightly with a warm water bath and the clear colorless solution stirred an additional 20 min after addition was completed. The mixture was diluted with 3 ml of 1,2-dichloroethane and, with cooling, a solution of 510 mg (6.3 mmol) of Compound A was added dropwise. The solution was heated at reflux for 15 min, ice cooled and a solution of 2.6 g (31.5 mmol) of sodium acetate was added with vigorous stirring. The mixture was heated at 80° C. for 20 min, cooled to rt and extracted with methylene chloride. The extracts were washed with brine, dried (MgSO4) and the solvent removed to give a dark oil residue. This material was subjected to flash chromatography on silica with 10percent EtOAc:hexane to afford 126 mg (18percent) of Compound B as a light tan solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | Lithium aluminium hydride (899 mg, 23.6 mmol) was added to the solution of lH-pyrrole-2-carbaldehyde (750 mg, 7.9 mmol) in tetrahydrofuran (10 mL) at 0 C then the mixture was heated at reflux for 16 h. The mixture was quenched into ice water and extracted with ethyl acetate. The combined organic phases were washed with water, brine, dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a residue which was purified by washing with ?-pentane. Drying afforded 2-methyl-lH-pyrrole (500 mg, 77%). | |
73% | With hydrazine hydrate; potassium hydroxide; In ethylene glycol; at 80 - 180℃; for 3.5h;Inert atmosphere; | Two-necked reaction balloon (250?mL); ethyleneglycol (80?mL), KOH (8?g, 142?mmol), hydrazinehydrate (N2H4·H2O), (6?mL, 0.12?mmol) and pyrrole-2-carboxyaldehyde (1H-pyrrole-2-carbaldehyde) (4?g, 42?mmol) were added at room temperature under nitrogen. The reaction balloon was placed in the jacketed heater and the temperature control probe and the other neck reflux system were placed. The temperature controller was heated for 15?min at 80?C then brought to 130?C and stirred for 15?min. (After 30?min, the mixture was further refluxed for 3?h at 180?C) . After 3?h, the temperature was turned off and the temperature of there action medium was reduced to 50?C. The reflux of there action system, which cooled to 50?C, was removed, replacing the small distillate bridge and collection adapter on the distillate bridge, 25?mL collection bubbles on both ends of the adapter, and the distillate bridge connected to the vacuum device. The system was turned on and the temperature was raised slowly. When the temperature reached 88.4?C, the reaction mixture started to boil. The first distillate came to the collection balloon at 90?C. The distillate was collected for 35?min and the temperature slowly began to fall. Then the temperature and vacuum were turned off. The distillate from the system was extracted with diethylether (3?*?20?mL) and dried over Na2SO4 to remove the excess solvent under reduced vacuum (light yellow liquid, 2.51?g, % 73), (Fig. 5 ). 1H NMR (CDCl3, 300MHz, ppm) deltaH 7.92 (bs, 1H, N-H), 6.69 (s, 1H, Pi-H), 6.16 (t, J=2.6Hz, 1H, Pi-H), 5.94 (d, J=2.5Hz, 1H, Pi-H), 2.31 (s, 3H, -CH3). 13C NMR (CDCl3, 75MHz, ppm) deltaC 128.0, 116.7, 108.7, 106.1, 13.2. FT-IR (cm-1): 3376, 3097, 2916, 1684, 1571, 1457, 1412, 1269, 1117, 1094, 1025, 951, 884, 782, 707. |
35% | A. 2-Methylpyrrole To 80 ml of a 1 M solution of lithium aluminum hydride in ether (80 mmol), at rt and under argon, was added dropwise a solution of 4.0 g (40 mmol) of 2-formylpyrrole at such a rate as to maintain gentle reflux. Reflux was continued for 6 hr. The excess hydride was hydrolyzed by the dropwise sequential addition of 3 ml of water (with cooling), 3 ml of 15% sodium hydroxide, and 9 ml of water. The resulting solids were removed by filtration and the filter cake washed well with additional ether. The filtrate was evaporated to dryness and the dark oil residue diluted with methylene chloride, dried (MgSO4) and the solvent removed. The resulting dark oil was distilled (kugelrohr, 700 mm, 100 C.) to afford 1.13 g (35%) of Compound A as a clear colorless oil. |
With potassium hydroxide; hydrazine; In monoethylene glycol diethyl ether; at 90℃; for 1.75h;Heating / reflux; | Intermediate 32; 2-Methyl- 1 H-pyrrole; Potassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol(750 ml) and lH-pyrrole-2-carbaldehyde (50 g,0.53 mmol). Hydrazine hydrate (37 ml, 0.745 mmol) was added slowly over 15 minutes. The reaction mixture was refluxed at 90 C for 90 minutes. The mixture was cooled to room temperature and cold water (250 ml) was added.The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with water (250 ml), dried over Na2SO4 and concentrated in vacuo. Kugelrohr distillation gave the title compound as a clear colourless liquid (29.75 g). NMR: 2.14 (s, 3H), 5.77 (s, IH), 5.93 (dd, IH), 6.25 (dd, IH), 10.54 (s, IH). | |
With potassium hydroxide; hydrazine; In ethylene glycol; at 90℃; for 1.75h; | Intermediate 5 2-Methyl- 1 H-pyrrolePotassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol (750 ml) and lH-pyrrole-2-carbaldehyde (50 g,0.53 mmol). Hydrazine hydrate (37 ml, 0.745 mmol) was added slowly over 15 min. The reaction mixture was refluxed at 90 0C for 90 min. The mixture was cooled to room temperature and cold water (250 ml) was added. The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with EPO <DP n="79"/>water (250 ml), dried over Na2SO4 and concentrated in vacuo. Kugelrohr distillation gave the title compound as a clear colourless liquid (29.75 g). NMR: 2.1 (s, 3H), 5.77 (s, IH), 5.9 (dd, IH), 6.25 (dd, IH), 10.54 (s, IH). | |
With potassium hydroxide; hydrazine; In ethylene glycol; at 90℃; for 1.75h; | Potassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol (750 ml) and lH-rhoyrrole-2-carbaldehyde (50 g,0.53 mmol). Hydrazine hydrate (37 ml, 0.745 mmol) was added slowly over 15 minutes. The reaction mixture was refluxed at 90 C for 90 minutes. The mixture was cooled to room temperature and cold water (250 ml) was added. The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with water (250 ml), dried over Na2SO4 and concentrated in vacuo. Kugelrohr distillation gave the title compound as a clear colourless liquid (29.75 g). NMR: 2.1 (s, 3H); 5.77 (s, IH); 5.9 (dd, IH); 6.25 (dd, IH); 10.54 (s, IH). | |
2-Methylpyrrole was prepared from pyrrole-2-carboxaldehyde by reduction with LiAlH4. [R. L. Hinman and S. Theodoropulus. J. Org. Chem. 28, 3052 (1963)]. | ||
With potassium hydroxide; hydrazine; In ethylene glycol; for 1.5h;Heating / reflux; | The 2-methyl-1H-pyrrole used in Stage C was prepared as follows: 750 g of pure caustic potash is added to a suspension containing 5 l of ethylene glycol and 370 g of 2-carboxaldehyde pyrrole. Then 544 cm3 of 64% hydrazine hydrate is added over 30 minutes. The reaction medium is taken to reflux for 1 hour 30 minutes and 2 l of demineralized water is added then it is poured into a water-ice mixture. Extraction is carried out with methylene chloride, followed by drying, separating, rinsing and bringing to dryness. 270.3 g of product is obtained which is purified by distillation under pressure of 15 millibars. 227 g of sought product is collected. Tbp=46~47 C. under 15 millibars. | |
With potassium hydroxide; hydrazine; In ethylene glycol; at 90℃; for 1.75h; | Potassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol (750 ml) and 1 H-PYRROLE-2-CARBALDEHYDE (50 g, 0.53 mmol). Hydrazine hydrate (37 ML, 0.745 mmol) was added slowly over 15 minutes. The reaction mixture was refluxed at 90 C for 90 minutes. The mixture was cooled to room temperature and cold water (250 ML) was added. The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with water (250 ML), dried over NA2SO4 and concentrated in vacuo. KUGELROHR distillation gave the title compound as a clear colourless liquid (29.75 g). H NMR 8 : 2. 1 (s, 3H); 5.77 (s, 1 H) ; 5.9 (dd, 1H) ; 6.25 (dd, 1H) ; 10.54 (s, 1 H). | |
With hydrazine hydrate; potassium hydroxide; In ethylene glycol; at 90℃; | Intermediate 31; 2-Methyl- 1 H-p yrrole; Potassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol (750 ml) and lH-pyrrole-2-carbaldehyde (50 g,0.53 mmol). Hydrazine hydrate (37 ml, 0.745 mmol) was added slowly over 15 min. The reaction mixture was refluxed at 90 0C for 90 min. The mixture was cooled to room temperature and cold water (250 ml) was added. The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with water (250 ml), dried over Na2SO4 and concentrated in vacuo. Kugelrohr distillation gave the title compound as a clear colorless liquid (29.75 g). NMR: 2.1 (s, 3H), 5.77 (s, IH), 5.9 (dd, IH), 6.25 (dd, IH), 10.54 (s, IH). | |
With potassium hydroxide; hydrazine; In ethylene glycol; at 90℃; for 1.75h;Heating / reflux; | Potassium hydroxide (50 g, 0.89 mmol) was added to a solution of ethylene glycol(750 ml) and lH-pyrrole-2-carbaldehyde (50 g,0.53 mmol). Hydrazine hydrate (37 ml, 0.745 mmol) was added slowly over 15 minutes. The reaction mixture was refluxed at 90 C for 90 minutes. The mixture was cooled to room temperature and cold water (250 ml) was added.The aqueous mixture was extracted with DCM (250 ml). The organic phase was washed with water (250 ml), dried over Na2SO4 and concentrated in vacuo. Kugelrohr distillation gave the title compound as a clear colourless liquid (29.75 g). NMR: 2.1 (s, 3H); 5.77 (s, IH); 5.9 (dd,IH); 6.25 (dd, IH); 10.54 (s, IH). | |
With potassium hydroxide; hydrazine; In ethylene glycol; | Scheme 4: Synthesis of COC-1: |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With zinc Erhitzen im Wasserstoffstrom; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | DMF (8.54 g, 117 mmol) and dichloroethane (120 mL) were added to a 250-mL 3-necked round-bottom flask fitted with a magnetic stir bar. Phosphoryl chloride (17.9 g, 117 mmol) was added dropwise with stirring at 0 C. The resulting solution was stirred for 15 min at room temperature and then 2-methyl-1H-pyrrole (10.0 g, 123 mmol) was added dropwise with stirring at 0 C. The resulting solution was stirred at 80 C. for 30 min. A solution of sodium acetate (46 g, 561 mmol) in water (130 mL) was then added at room temperature. The resulting solution was stirred for 20 min at 80 C. then cooled to room temperature and quenched with water (100 mL). The resulting solution was extracted with dichloromethane (3×250 mL) and the organic layers were combined and washed with saturate aqueous sodium bicarbonate solution (150 mL). The organic phase was dried over anhydrous sodium sulfate, filtered and concentrated under vacuum. The residue was purified by column chromatography eluting with ethyl acetate/hexane (1:5 v/v) to afford 5-methyl-1H-pyrrole-2-carbaldehyde (7.50 g, 56%). LCMS (ESI) m/z 110 [M+H]. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In diethyl ether; for 2h; | Intermediate 31; 2,2,2-Trichloro-l-(5-methyl-lH-pyrrol-2-vDethanone; 30 2-Methyl-lH-pyrrole (Intermediate 32, 1O g, 0.123 mmol) in anhydrous diethyl ether(30 ml) was added dropwise over 1 h to a stirred solution of triacetyl chloride (29 g, 0.16 mmol) in anhydrous Et2O (100 ml). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ml) was added slowly through a dropping funnel. The organic phase was dried over EPO <DP n="61"/>Na2SO4 and treated with decolourizing charcoal (3 g) for 30 minutes at room temperature.The resulting purple solution was concentrated and triturated with n-hexanes to give the title compound as a purple solid. (16.72 g). NMR (CDCl3): 2.36 (s, 3H), 6.04 (dd, IH), 7.45 (dd,IH), 10.34 (s, IH). | |
Intermediate 4; 2,2,2-Trichloro- 1 -f 5-methyl- 1 H-pyrrol-2-yl)ethanone2-Methyl-lH-pyrrole (Intermediate 5; 10 g, 0.123 mmol) in anhydrous diethyl ether (30 ml) was added dropwise over 1 h to a stirred solution of triacetyl chloride (29 g, 0.16 mmol) in anhydrous Et2O (100 ml). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ml) was added slowly through a dropping funnel. The organic phase was dried over Na2SO4 and treated with decolourizing charcoal (3 g) for 30 min at room temperature. The resulting purple solution was concentrated and triturated with n-hexanes to give the title compound as a purple solid. (16.72 g). NMR (CDCl3): 2.36 (s, 3H), 6.04 (dd, IH), 7.45 (dd, IH), 10.344 (s, IH). | ||
In diethyl ether; for 2h; | 2-Methyl-lH-pyrrole (Intermediate 13; 10 g, 0.123 mmol) in anhydrous diethyl ether (30 ml) was added dropwise over 1 h to a stirred solution of triacetyl chloride (29 g, 0.16 mmol) in anhydrous Et2O (100 ml). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ml) was added slowly through a dropping funnel. The organic phase was dried over Na2SO4 and treated with decolourizing charcoal (3 g) for 30 minutes at room temperature. The resulting purple solution was concentrated and triturated with n-hexanes to give the title EPO <DP n="56"/>compound as a purple solid. (16.72 g). NMR (CDCl3): 2.36 (s, 3H); 6.04 (dd, IH); 7.45 (dd, IH); 10.344 (s, lH). |
In diethyl ether; for 2h; | 2-METHYL-1 H-PYRROLE (Intermediate 22,10 g, 0.123 mmol) in anhydrous diethyl ether (30 MI) was added dropwise over 1 h to a stirred solution of triacetyl chloride (29 g, 0.16 mmol) in anhydrous ET20 (100 ML). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ML) was added slowly through a dropping funnel. The organic phase was dried over NA2SO4 and treated with decolourizing charcoal (3 g) for 30 minutes at room temperature. The resulting purple solution was concentrated and triturated with n-hexanes to give the title compound as a purple solid. (16. 72 G). 'H NMR (CDCL3) No.: 2. 36 (s, 3H); 6.04 (DD, 1H) ; 7.45 (dd, 1H) ; 10.344 (s, 1H). | |
Intermediate 30; 2,2,2-Trichloro-l-(5-methyl-lH-pyrrol-2-yl)ethanone; 2-Methyl-lH-pyrrole (Intermediate 31, 1O g, 0.123 mmol) in anhydrous diethyl ether (30 ml) was added dropwise over 1 h to a stirred solution of trichloroacetyl chloride (29 g, 0.16 mmol) in anhydrous Et2O (100 ml). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ml) was added slowly through a dropping funnel. The organic phase was dried over Na2SO4 and treated with decolorizing charcoal (3 g) for 30 min at room temperature. The resulting purple solution was concentrated and triturated with n-hexanes to give the title compound as a purple solid. (16.72 g). NMR (CDCl3): 2.36 (s, 3H), 6.04 (dd, IH), 7.45 (dd, IH), 10.344 (s, IH). | ||
In diethyl ether; for 2h; | 2-Methyl-lH-pyrrole (Intermediate 46; 10 g, 0.123 mmol) in anhydrous diethyl ether (30 ml) was added dropwise over 1 h to a stirred solution of triacetyl chloride (29 g, 0.16 mmol) in anhydrous Et2O (100 ml). The mixture was stirred for a further 1 h then K2CO3 (10 g/30 ml) was added slowly through a dropping funnel. The organic phase was dried over Na2SO4 and treated with decolourizing charcoal (3 g) for 30 minutes at room temperature. The resulting purple solution was concentrated and triturated with n-hexanes to give the title compound as a purple solid. (16.72 g). NMR (CDCl3): 2.36 (s, 3H); 6.04 (dd, IH); 7.45 (dd, IH); 10.344 (s, IH). | |
In tetrahydrofuran; at 0 - 20℃; for 16h; | To a solution of 2-methyl-lH-pyrrole (10 g, 123.3 mmol) in THF (100 mL) was added 2,2,2-trichloroacetyl chloride (26.9 g, 148 mmol) at 0C. The mixture was then stirred at rt for 16 hrs. The mixture was poured into H20 (500 mL), then extracted with EtOAc (500 mL x 2), dried, and concentrated to give residue of 2,2,2-trichloro-l-(5-methyl-lH-pyrrol-2-yl) ethanone (26.6 g, 95%) as a yellow solid which was used in the next step without further purification. ESI-MS (EI+, m/z): 226.0 [M+H]+. | |
In tetrahydrofuran; at 0 - 20℃; for 16h; | To a solution of <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (10 g, 123.3 mmol) in THF (100 mL) was added 2,2,2-trichloroacetyl chloride (26.9 g, 148 mmol) at 0 C. The mixture was then stirred at rt for 16 hrs. The mixture was poured into H2O (500 mL), then extracted with EtOAc (500 mL×2), dried, and concentrated to give residue of 2,2,2-trichloro-1-(5-methyl-1H-pyrrol-2-yl) ethanone (26.6 g, 95%) as a yellow solid which was used in the next step without further purification. ESI-MS (EI+, m/z): 226.0 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In tetrahydrofuran; | b) Preparation of N-t-butoxycarbonyl-2-methylpyrrole (50) 2-Methyl pyrrole (2.5 g) was dissolved in 6 ml tetrahydrofuran, and was slowly added to a suspension of 2.4 g 60% sodium hydride (washed with ether) in 30 ml tetrahydrofuran. A solution of 7.6 g di-t-butyl-dicarbonate in 20 ml of the same solvent was added to this cooled mixture. After shaking occasionally for 3 hours, it was decomposed carefully with water, and extracted with ether. The combined organic layer was washed with saturated brine and dried over magnesium sulfate. Removal of the solvent gave 6 g residue. Bulb-to-bulb distillation gave 4.5 g slightly yellow oil (ca. 80 C./5 mmHg). Yield 80%. MS(CI), 183(M+2). H1 -NMR (CDCl3) delta 1.584 (s, 9H, 3CH3), 2.421 (s, 3H, CH3). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
im Wasserstoffstrom; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
18% | B. 2-Formyl-5-methyl-pyrrole To 0.54 ml of DMF, with ice cooling and under argon, was added dropwise 0.64 ml of POCl3. The reaction, which solidified during the addition, was warmed lightly with a warm water bath and the clear colorless solution stirred an additional 20 min after addition was completed. The mixture was diluted with 3 ml of 1,2-dichloroethane and, with cooling, a solution of 510 mg (6.3 mmol) of Compound A was added dropwise. The solution was heated at reflux for 15 min, ice cooled and a solution of 2.6 g (31.5 mmol) of sodium acetate was added with vigorous stirring. The mixture was heated at 80 C. for 20 min, cooled to rt and extracted with methylene chloride. The extracts were washed with brine, dried (MgSO4) and the solvent removed to give a dark oil residue. This material was subjected to flash chromatography on silica with 10% EtOAc:hexane to afford 126 mg (18%) of Compound B as a light tan solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With trifluoroacetic acid In dichloromethane for 1h; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | With methanol; acetyl chloride; at -78 - 0℃; for 1h; | [0230] Freshly distilled acetyl chloride (1 equiv.) was added dropwise at 0C to anhydrous methanol (0.2-0.5 mM) and the mixture was stirred for 15 min. The appropriate pyrrolic N-benzylhydroxylamine (5) (1 equiv.) was added and the mixture was cooled at -78 C before the addition of the appropriate pyrrole derivative (1). The mixture was warmed to the suitable temperature and stirred until complete disappearance of the starting material (followed by TLC). The mixture was then treated with saturated aqueous NaHCO3 solution. The pH value was 8-9. The aqueous layer was extracted three times with CH2Cl2. The combined organic layers were washed with brine, dried over anhydrous MgSO4 and concentrated. The obtained unsymmetrical bis(pyrrolyl)alkane 7 was purified by flash chromatography on silica gel pretreated with 3% of Et3N (v/v). [0240] Prepared according to the above general procedure from the corresponding N-benzylhydroxylamine 5b (34 mg, 0.10 mmol) in 2.0 mL of MeOH, 2-methylpyrrole 1c (8 mg, 0.10 mmol) and acetyl chloride (8 mg, 0.10 mmol). The mixture was stirred at 0C for 1 hour. Purification (eluent: pentane/EtOAc, 3/2) afforded unsymmetrical 2,2'-bis(pyrrolyl)alkane 7e (29 mg, 95 mumol, 95%) as a white solid. Mp: 72-73 C. IR (KBr disc): 33140, 2950, 2920, 2850, 1630, 1480, 1440, 1415 cm-1. 1H NMR (400 MHz, CDCl3) delta (ppm) 2.15 (3H, s, CH3), 2.21 (3H, s, CH3), 2.39 (3H, s, CH3), 2.42 (3H, s, CH3), 5.44 (1H, s, H1), 5.66 (1H, br s, HPyr), 5.80 (1H, br s, HPyr), 7.17 (2H, d, J = 7.2 Hz, 2HAr), 7.27-7.34 (3H, m, 3HAr), 7.61 (1H, br s, NH), 7.72 (1H, br s, NH). 13C NMR (100 MHz, CDCl3) delta (ppm) 11.9 (CH3), 13.2 (CH3), 15.3 (CH3), 31.1 (CH3), 41.5 (CH, C1), 106.2 (CHPyr), 108.0 (CHPyr), 116.3 (CPyr), 122.0 (CPyr), 126.8 (CPyr), 127.1 (CHAr), 127.7 (CPyr), 128.3 (2CHAr), 128.9 (2CHAr), 130.3 (CPyr), 133.6 (CAr), 141.6 (CPyr), 195.7 (CO). LRMS (ESI+): m/z 329 ([M+Na]+, 50), 307 ([M+H]+, 50). HRMS (ESI+) Calcd for C20H22N2ONa 329.1624. Found: 309.1621 ([M+Na]+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | With methanol; acetyl chloride; at -78 - 0℃; for 1.5h; | [0230] Freshly distilled acetyl chloride (1 equiv.) was added dropwise at 0C to anhydrous methanol (0.2-0.5 mM) and the mixture was stirred for 15 min. The appropriate pyrrolic N-benzylhydroxylamine (5) (1 equiv.) was added and the mixture was cooled at -78 C before the addition of the appropriate pyrrole derivative (1). The mixture was warmed to the suitable temperature and stirred until complete disappearance of the starting material (followed by TLC). The mixture was then treated with saturated aqueous NaHCO3 solution. The pH value was 8-9. The aqueous layer was extracted three times with CH2Cl2. The combined organic layers were washed with brine, dried over anhydrous MgSO4 and concentrated. The obtained unsymmetrical bis(pyrrolyl)alkane 7 was purified by flash chromatography on silica gel pretreated with 3% of Et3N (v/v). [0242] Prepared according to the above general procedure from the corresponding N-benzylhydroxylamine 5d (40 mg, 84 mumol) in 2.0 mL ofMeOH, 2-methylpyrrole 1c (7 mg, 86 mumol) and acetyl chloride (7 mg, 89 mumol). The mixture was stirred at 0C for 1.5 hour. Purification (eluent: pentane/EtOAc, 1/1) afforded unsymmetrical 2,2'-bis(pyrrolyl)alkane 7f (36 mg, 83 mumol, 98%) as a yellow solid. Mp: 108-109C. IR (KBr disc): 3410, 2970, 2920, 2850, 1620, 1435, 1000 cm-1. 1H NMR (400 MHz, CDCl3) delta (ppm) 2.12 (3H, s, CH3), 2.21 (3H, s, CH3), 2.40 (3H, s, CH3), 2.42 (3H, s, CH3), 5.37 (1H, s, H1), 5.63-5.65 (1H, m, HPyr), 5.79-5.81 (1H, m, HPyr), 6.91 (2H, d, J = 8.4 Hz, 2HAr), 7.57 (1H, br s, NH), 7.62-7.64 (3H, m, 2HAr and NH). 13C NMR (100 MHz, CDCl3) delta (ppm) 11.8 (CH3), 13.2 (CH3), 15.3 (CH3), 31.1 (CH3), 41.1 (CH, C1), 92.4 (C-I), 106.4 (CHPyr), 108.2 (CHPyr), 116.5 (CPyr), 122.1 (CPyr), 126.1 (CPyr), 128.1 (CPyr), 129.6 (CPyr), 130.3 (2CHAr), 133.7 (CAr), 137.9 (2CHAr), 141.4 (CPyr), 195.6 (CO). LRMS (ESI+): m/z 433 ([M+H]+, 100). HRMS (ESI+) Calcd for C20H21ON2INa 455.0590. Found: 455.0596 ([M+Na]+). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Step I: 2-(2-Methyl-1H-pyrrol-1-yl)ethanamine Sodium hydroxide anhydrous (9.87 g, 0.246 mol, 4.0 eq.) and TBAHS (0.838 g, 0.002 mol, 0.04 eq.) were added to a solution of <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (5.0 g, 0.061 mol, 1.0 eq.) in acetonitrile (180 ml) at 0 C. and the mixture was stirred at RT for 1 h. 2-Chloroethylamine hydrochloride (8.59 g, 0.074 mol, 1.2 eq.) was added to the reaction mixture and it was then heated at reflux for 16 h. The reaction mixture was cooled to RT, filtered through celite and washed with 10% MeOH/DCM (200 ml). The filtrate was concentrated under reduced pressure to give the crude product which was used in the next step without further purification. Yield: 100%, crude (7.6 g, 0.061 mol) | ||
Step-I: 2-(2-Methyl-1H-pyrrol-1-yl)ethanamineSodium hydroxide anhydrous (9.87 g, 0.246 mol, 4.0 eq.) and TBAHS (0.838 g, 0.002 mol, 0.04 eq.) were added to a solution of 2-methyl-1 H-pyrrole (5.0 g, 0.061 mol, 1.0 eq.) in acetonitrile (180 ml) at 0 C and the mixture was stirred at RT for 1 h. 2-Chloroethylamine hydrochloride (8.59 g, 0.074 mol, 1.2 eq.) was added to the reaction mixture and it was then heated at reflux for 16 h. The reaction mixture was cooled to RT, filtered through celite and washed with 10% MeOH/DCM (200 ml). The filtrate was concentrated under reduced pressure to give the crude product which was used in the next step without further purification.Yield: 100 %, crude (7.6 g, 0.061 mol) | ||
General procedure: To a solution of the corresponding pyrrole or indole derivative (10 mmol) in MeCN (30 ml) was added sodium hydroxide (2.00 g, 50 mmol) and tetrabutylamonium hydrogen sulfate (0.17 g, 0.5 mmol). After the solution was stirred at room temperature for 30 min, 2-chloroethylamine hydrochloride (1.39 g, 12 mmol) was added. Then the reaction mixture was refluxed for 24 h. The mixture was poured into water (100 ml), extracted with diethyl ether, dried under MgSO4, and concentrated under reduced pressure to give a crude product. The crude was then purified by flash column chromatography on silica gel (eluted with petroleum ether / ethyl acetate=1 : 1) to give the pure product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
59% | General procedure: To a solution of <strong>[636-41-9]2-methyl-pyrrole</strong> (100 mg, 1.2 mmol) in THF (6 mL) was added KHMDS (3.0 mL, 0.5 M solution in toluene) at -78 C. After the mixture was stirred for 40 min at -78 C, to the mixture was added a solution of o-NsCl (328 mg, 1.5 mmol) in THF (1 mL) at this temperature. The mixture was stirred at -78 C for 40 min, and the reaction was quenched with sat. aq. solution of NH4Cl at -78 C. The mixture was extracted with ethyl acetate (x2). The combined organic layers were dried over MgSO4, filtered, concentrated under reduced pressure. The residue was purified by flash silica gel column chromatography (elution with hecxane/ethyl acetate = 3/1) to give 8 (192 mg, 59%) as a brown solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
42% | Stage #1: 1-(3,5-dimethyl-1H-pyrrol-2-yl)ethan-1-one With trichlorophosphate In dichloromethane at 20℃; for 1h; Inert atmosphere; Stage #2: 2-methyl-1H-pyrrole In dichloromethane at 20℃; for 12h; Inert atmosphere; Stage #3: boron trifluoride diethyl etherate With triethylamine In dichloromethane at 20℃; for 0.5h; Inert atmosphere; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 2 steps 1.1: trichlorophosphate / dichloromethane / 1 h / 20 °C / Inert atmosphere 1.2: 12 h / 20 °C / Inert atmosphere 1.3: 0.5 h / 20 °C / Inert atmosphere 2.1: piperidine; acetic acid / benzene / 5 h / Inert atmosphere; Reflux |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40% | A 1L round bottom flask under a nitrogen atmosphere charged with <strong>[636-41-9]2-methyl-pyrrole</strong> 6.1g (75 mmol), benzoyl chloride 5.3 g (38 mmol) and dichloromethane (DCM) 250 ml were added and stirred at room temperature for 24 hours. Then, triethylamine (TEA) 26 ml, boron trifluoride diethyl ether (BF3OEt2) 26 ml was added and stirred for 4 hours at room temperature. Subsequently, by introducing water and the layers were separated and the organic layer was concentrated and then a mixed solvent of dichloromethane and hexane (1: 2 (v / v)) by performing column chromatography to give a orange solid of intermediate (5) 4.5 g (yield: 40%). | |
28% | General procedure: To a solution of substituted pyrrole (2eq.) in C2H4Cl2 (40mL) was dropwise added a solution of acylchloride (1eq.) at room temperature under nitrogen. After addition, the solution was stirred at 120C for 16h under nitrogen. The solution was cooled to 0C ice-water bath, triethylamine (5eq.) was then added dropwise at 0C for 10min, and the mixture was stirred for 10min (Fig. 7 ). The ice-water bath was removed. After reaction mixture was reached to room temperature, then BF3.OEt2 (10eq.) was added, and the mixture was stirred at room temperature for 20h. After removal of solvent, the residue was passed through a silica gel column using 25% CH2Cl2 in hexanes to give BODIPY as crystalline product after removal of solvent. 4.2.3 Synthesis of 4,4-difluoro-8-phenyl-3,5-dimethyl-4-bora-3a,4a-diaza-s-indacene (2A) Bright green crystal (400?mg, 28%, isolated yield); m.p?=?110-112?C; Rf (50% Hexane/EtOAc)?=?0.67. 1H NMR (CDCl3, 300?MHz, ppm) deltaH 7.49-7.46 (m, 5H, Ar-H), 6.70 (d, J?=?4.1?Hz, 2H, Pi-H), 6.26 (d, J?=?4.1?Hz, 2H, Pi-H), 2.66 (s, 6H, -CH3). 13C NMR (CDCl3, 75?MHz, ppm) deltaC 157.8, 142.8, 134.7, 134.3, 130.7, 130.6, 130.2, 128.4, 119.6, 15.2. 19F NMR (CDCl3, 282?MHz, ppm) deltaF -147.95 (q, JBF?=?33.51?Hz) FT-IR (cm-1): 2975, 2850, 1738, 1576, 1538, 1493, 1437, 1395, 1260, 1218, 1135, 1064, 981, 879, 781, 717. MALDI-TOF-MS m/z calcd. for C17H15BF2N2 [M]+: 296.1296; found: 296.1237. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40% | To a two-necked round-bottomed 1L flask equipped with a magnetic stirrer was added degassed DCM (400 ml) and p-julolidinealdehyde (0.75 g, 3.7 mmol, 1 eq.). To the solution was added 2-methylpyrrole (0.67 mL, 7.9 mmol, 2.14 eq.) and a catalytic quantity (8 drops) of trifluoroacetic acid. The yellow solution turned deep red in 20 min. The flask was protected from light and the reaction was kept at 10-18 C for 8 h and monitored by TLC until the complete consumption of the starting material. A solution of 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (0.84 g, 3.7 mmol, 1 eq.) was then added and the solution kept at 10-15 C for 8 h. The reaction was quenched with H2O (100 ml) and the separated aqueous layer was extracted with DCM (200 mL). The combined organics were washed with saturated brine (2 × 200 mL), water (4 × 100 mL), before being separated and dried over magnesium sulfate. The DCM was removed under reduced pressure to afford a brick-red gel-like residue, which was then purified via column chromatography on neutral alumina (eluent:petrol ether:DCM (2:1), then DCM:ethyl acetate 2:1). Recrystallization of the collected material with DCM: petrol ether (1:4) afforded a brick red crystalline material (0.51 g, 40% yield). Mp. = 114-118 C. 1H NMR (CDCl3, 300 MHz) delta (ppm) = 7.00 (s, 2H); 6.87 (d, J = 3.6 Hz, 2H); 6.25 (d, J = 3.6 Hz, 2H); 3.25 (t, J = 6.5 Hz, 4H); 2.77 (t, J = 6.5 Hz 4H); 2.63 (s, 6H); 2.00-1.97 (m, 4H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
11% | General procedure: The synthesis follows the reported method (Fig. 2) in literature [3].In an oven dried flask, 2,4-dimethylpyrrole (0.22 mL, 2.1 mmol) or 2-methylpyrrole (0.18 mL, 2.1 mmol) and the corresponding aldehyde(1.0 mmol) were dissolved in absolute dichloromethane (DCM, 20 mL).50 muL of TFA was added and the mixture was stirred at room temperaturefor 20 h. When TLC revealed disappearance of the aldehyde,DDQ in dichloromethane (50 mL) was added to the solution, and stirredfor 120 min. N,N-diisopropylethylamine (DIPEA, 5 mL) was added tothe mixture and stirred at room temperature for 20 min. Then borontrifluoride etherate (3 mL) was added, and stirring was continued for12 h. The reaction mixture was washed twice with water and saturatedNaCl, and was dried by anhydrous MgSO4. The solvent was filtered andremoved under vacuum. The crude compound was purified by silica gelflash chromatography using 30% DCM in petroleum ether to afford the pure sample. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
7% | Probe 1 was synthesized according to known literature 1. To a dry dichloromethane (CH2Cl2) solution (150 mL) of <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (810.0 mg, 10.0 mmol) at -78 C under an argon atmosphere, a solution of methyl chlorooxoacetate (428.8 mg, 3.5 mmol) in dry CH2Cl2 (50 mL) was added dropwise over 1 hour, and the mixture was stirred at this temperature for 5 hours, before the sequential addition of Et3N (2.1 mL, 15.0 mmol) and BF3OEt2 (3.1 mL, 24.1 mmol). The mixture was slowly warmed to room temperature (RT), and further stirred at RT for 6 hours. After removing the solvent, the residues were further purified by a silica gel column chromatograph using petroleum ether (PE)/CH2Cl2 (v/v: 3/2) as the mobile phase to afford probe 1 as a red solid (68 mg, yield: 7 %). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
45% | 9-Anthraldehyde (2.4mmol) and 2-methylpyrrole (4.8mmol) were dissolved in anhydrous CH2Cl2 (300mL) under an Ar atmosphere. One drop of trifluoroacetic acid (TFA) was added, and the solution was stirred at room temperature overnight. When thin layer chromatography (TLC) monitoring showed complete consumption of the aldehyde, a solution of 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ) (2.4mmol) in CH2Cl2 (100mL) was added to the solution. After stirring for 30minat room temperature, triethylamine (4.8mL) and boron trifluoride etherate (BF3-OEt2) (4.8mL) was added, and stirring was continued for 2h. The reaction mixture was washed with water and dried over anhydrous MgSO4, filtered, and evaporated. The crude compound was purified by silica gel chromatography (CH2Cl2/hexane=1:3) to afford an analytically pure sample (Yield: 45%). Melting point 268-270C. 1H NMR (400MHz, CDCl3): delta 2.74 (s, 6H), 6.14-6.19 (m, 4H), 7.42 (m, 2H, J=7.6Hz), 7.50 (m, 2H, J=7.6Hz), 7.90 (d, 2H, J=8.8Hz), 8.07 (d, 2H, J=8.4Hz), 8.61 (s, 1H); 13C NMR (100MHz, CDCl3): delta 15.02, 119.79, 125.50, 126.29, 126.50, 127.11, 128.26, 128.60, 130.11, 130.86, 130.97, 136.35, 139.94, 158.08ppm; MALDI-TOF-MS: m/z: 397 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
48% | General procedure: NaH (201.6 mg, 8.4 mmol, 1.2 equiv) was added slowly to a stirred mixture of DMF (20 mL) and 2-aryl pyrrole S1 (7.0 mmol) at 0C. The resulting mixture wasstirred at 0C for 10 min. Then S2 (1.25g, 8.4 mmol, 1.2 equiv) was added slowly tothe reaction mixture. The reaction was stirred at room temperature until the starting material was consumed as indicated by TLC. After the reaction was cooled to 0 C, itwas quenched with H2O slowly and extracted with EtOAc (3 × 20 mL). Thecombined organic layers were washed with brine, dried over anhydrous Na2SO4,filtrated and the solvents were removed under reduced pressure. The residue was purified by silica gel column chromatography (PE/EA = 100/1) to afford the desired product 2. The characterization data of 2 are summarized below. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43% | With sodium hydride; In N,N-dimethyl-formamide; mineral oil; at 0 - 20℃; | 2,4-Dichloropyrimidine (2.0 g, 13.4 mmol) and <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (1.3 g, 16.1 mmol) were dissolved in DMF (40 mL). The solution was cooled to 0 C. and 60% NaH in oil (590 mg, 14.74 mmol) was added. The mixture was stirred at 0 C. for 15 minutes and allowed to warm up to room temperature. After stirring overnight, ethyl acetate (60 mL) was added. The mixture was washed with water (2*30 mL), brine (30 mL), dried over anhydrous Na2SO4, filtered, and evaporated. The residue was purified by column chromatography on silica gel (0-30% EtOAc/hexane) to afford the title compound III-7 as an off-white solid (1.12 g, 43% yield). 1H NMR (300 MHz, DMSO-d6): delta ppm 8.71 (d, J=5.7 Hz, 1H), 7.73 (d, J=5.7 Hz, 1H), 7.47 (m, 1H), 6.24 (t, J=3.2 Hz, 1H), 6.11 (m, 1H), 2.50 (s, 3H). LCMS (method 3): Rt 5.823 min, m/z 194.1 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
32% | A 1L round bottom flask under a nitrogen atmosphere charged with <strong>[636-41-9]2-methyl-pyrrole</strong> 6.1g (75 mmol), 4-fluorobenzoyl chloride 6.0 g (38 mmol) and dichloromethane (DCM) 250 ml were added and stirred at room temperature for 24 hours. Then, triethylamine (TEA) 26 ml, boron trifluoride diethyl ether (BF3OEt2) 26 ml was added and stirred for 4 hours at room temperature. Subsequently, by introducing water and the layers were separated and the organic layer was concentrated and then a mixed solvent of dichloromethane and hexane (1: 2 (v / v)) by performing column chromatography to give a orange solid of intermediate (6) 3.8 g (yield: 32%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
66% | To a solution of 2-methylpyrrole (1.0 g, 12 mmol) and 4-tertbutylbenzaldehyde(1.0 mL, 6 mmol) in CH2Cl2 (100 mL), trifluoroaceticacid (2 mL) was added. The mixture was stirred for about 1 hin argon atmosphere. Upon completion, the reaction solution wasquenched with a saturated NaOH aqueous solution (100 mL) andextracted with CH2Cl2. The organic layer was evaporated andpurified by column chromatography. Pure reddish brown powder(1.0 g, 3.2 mmol) obtained was re-dissolved in CH2Cl2 and 2,3-dichloro-5,6-dicyanobenzoquinone (DDQ; 2.70 g, 12 mmol) wasadded into the solution. After overnight stirring, Et3N (15 mL) wasadded to the solution and stirring was continued for another 5 minbefore the addition of boron trifluoride etherate (BF3OEt2;1.48 mL, 12 mmol). After 4 h, the reaction mixture wasfilteredthrough silica gel. Reddish crystals were obtained after recrystalli-zation from CH2CH2/hexane. Yield: 1.43 g (66%). 1H NMR:(500 MHz, CDCl3) (d ppm): 7.50 (d, J = 8 Hz, 2H), 7.44 (d, J = 8 Hz,2H), 6.78 (d, J = 3.5 Hz, 2H), 6.27 (d, J = 3.5 Hz, 2H), 2.65 (s, 6H), 1.39(s, 9H); 13C NMR: (125 MHz, CDCl3) (d ppm): 153.4, 151.2, 142.9,134.5, 131.2, 130.5, 130.3, 125.1, 119.1, 31.2, 14.8. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | With bismuth(lll) trifluoromethanesulfonate; In methanol; acetonitrile; at 60℃; for 1h;Sealed tube; | General procedure: To a 1 dram vial was added Bi(OTf)3 (4.2mg, 0.0063mmol, 0.025 equiv), 2,3-dimethylfuran (26 muL, 0.25 mmol), 3-methyl-2-cyclohexenone (82.6mg, 0.75mmol), and acetonitrile/methanol (10:1) solution (0.5mL). The vial was sealed with a PFTE/silicone-lined septum cap. The reaction was heated to 60C and allowed to stir at this temperature for 1 h. The mixture was cooled and concentrated under reduced pressure. The crude reaction mixture was purified by flash column chromatography on silica gel (5:1 hexane/ether) to yield a clear colorless oil (46.2 mg, 0.220 mmol, 88%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
53.3% | With caesium carbonate; In N,N-dimethyl-formamide; at 80℃; for 7h; | At room temperature, the 2 - fluoro -5 - nitro pyridine (21.3g, 0 . 15 muM), 2 - methyl pyrrole (14.6g, 0 . 18 muM) and cesium carbonate (81.5g, 0 . 25 muM) adding DMF (150 ml) in, raising the temperature to 80 °C reaction 7h. The reaction liquid is poured into a large amount of ice water, continuing to stir 0.5h, filtering. Yellow solid chromatography thick column 16.2g, yield is 53.3percent. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43.2% | With potassium carbonate; In N,N-dimethyl-formamide; at 130℃; for 7h; | At room temperature, will be 4 - fluoro nitrobenzene (14.1g, 0.1 muM), 2 - methyl pyrrole (8.1g, 0.1 muM) and potassium carbonate (41.5g, 0.3 muM) adding DMF (100 ml) in, heated to 130 C reaction 7h. The reaction liquid is poured into a large amount of ice water, continuing to stir 0.5h, filtering, the filter cake in ethyl acetate (150 ml) in recrystallization, to get the yellow solid 8.7g, yield is 43.2%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
48% | 2.1.2 Synthesis of 8-(2-bromothien-5-yl)-3,5-dimethyl-4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (BDY-T-Br) Trifluoroacetic acid (TFA) (4 drops) was added under nitrogen to a solution of 5-bromo-2-thiophenecarbaldehyde (1) (1.05 g, 5.49 mmol) and 2-methylpyrrole (2) (1.0 g, 12.42 mmol) in degassed CH2Cl2 (330 mL), and the mixture was stirred at ambient temperature overnight. 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ) (1.25 g, 5.49 mmol) was then added to this solution, and the reaction mixture was stirred for additional 3 h. Finally, N,N-diisopropylethylamine (i-Pr)2EtN (3.9 g, 30.08 mmol) and boron trifluoride diethyl etherate (BF3·Et2O) (2.72 g, 19.05 mmol) were added, and the reaction mixture was stirred for 2 h. The reaction mixture was poured into water and extracted with CH2Cl2. The organic phase was dried over Na2SO4, filtered, and evaporated to dryness to give a crude product. The crude was purified by column chromatography on silica gel using CH2Cl2:Hexanes (2:1) as the eluent, which yields the pure product as a crystalline red solid (1.0 g, 48% yield). m.p. 132-133 C. 1H NMR (400 MHz, CDCl3): delta 2.68 (s, 6H), 6.32 (d, 2H, J=4.0 Hz), 7.05 (d, 2H, J = 4.0 Hz), 7.19 (m, 2H). 13C NMR (100 MHz, CDCl3): 15.0, 116.9, 119.7, 130.1, 130.6, 131.7, 133.2, 133.9, 136.1, 158.2. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
15% | General procedure: 12 M HCl (0.034 mL, 0.4 mmol, 2.0 equiv) was added to a suspension of 3 (59.6 mg, 0.2 mmol,1.0 equiv) in water (10 mL) at 0 C and the mixture was stirred for 5 min. NaNO2 (14.48 mg, 0.21 mmol,1.05 equiv) in water (3 mL) was added dropwise and the resulting solution was stirred at 0 C for30 min, obtained diazonium salt solution. 12 M HCl (0.017 mL, 0.2 mmol, 1.0 equiv) was added toa suspension of the T2-T4 or T6-T11 (0.2 mmol, 1.0 equiv) in water (10 mL) at 0 C, diazonium saltsolution was added dropwise and the resulting solution was stirred at 0 C for 30 min. Then saturatedaqueous sodium bicarbonate solution was added dropwise till the pH was 7~8. The reaction wasstirred overnight. The resulting residue was extracted with CH2Cl2 (3 x 10 mL), washed with brine,dried over Na2SO4, and concentrated under reduced pressure to afford the crude product. The crudeproduct was purified on a silica column. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
28% | General procedure: To a solution of substituted pyrrole (2eq.) in C2H4Cl2 (40mL) was dropwise added a solution of acylchloride (1eq.) at room temperature under nitrogen. After addition, the solution was stirred at 120C for 16h under nitrogen. The solution was cooled to 0C ice-water bath, triethylamine (5eq.) was then added dropwise at 0C for 10min, and the mixture was stirred for 10min (Fig. 7 ). The ice-water bath was removed. After reaction mixture was reached to room temperature, then BF3.OEt2 (10eq.) was added, and the mixture was stirred at room temperature for 20h. After removal of solvent, the residue was passed through a silica gel column using 25% CH2Cl2 in hexanes to give BODIPY as crystalline product after removal of solvent. 4.2.1 Synthesis of 4,4-difluoro-8-ethyl-3,5-dimethyl-4-bora-3a,4a-diaza-s-indacene (1A) Green powder (400?mg, 28%, isolated yield); m.p?=?182-184?C; Rf (25% Hexane/EtOAc)?=?0.57. 1H NMR (CDCl3, 300?MHz, ppm) deltaH 7.09 (d, J?=?4.1?Hz, 2H, Pi-H), 6.27 (d, J?=?4.1?Hz, 2H, Pi-H), 2.83 (q, J?=?7.7?Hz, 2H, -CH2-), 2.60 (s, 6H, -CH3), 1.37 (t, J?=?7.7?Hz, 3H, -CH3). 13C NMR (CDCl3, 75?MHz, ppm) deltaC 158.8, 147.1, 134.5, 126.8, 119.0, 23.9, 18.4, 15.0. 19F NMR (CDCl3, 282?MHz, ppm) deltaF -148.65 (q, JBF?=?33.76?Hz) FT-IR (cm-1): 2967, 2922, 2858, 1727, 1572, 1493, 1456, 1373, 1286, 1241, 1146, 1097, 999, 958, 909, 784, 717, 664. MALDI-TOF-MS m/z calcd. for C13H15BF2N2 [M]+: 248.1296; found: 248.1474. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
21% | General procedure: To a solution of substituted pyrrole (2eq.) in C2H4Cl2 (40mL) was dropwise added a solution of acylchloride (1eq.) at room temperature under nitrogen. After addition, the solution was stirred at 120C for 16h under nitrogen. The solution was cooled to 0C ice-water bath, triethylamine (5eq.) was then added dropwise at 0C for 10min, and the mixture was stirred for 10min (Fig. 7 ). The ice-water bath was removed. After reaction mixture was reached to room temperature, then BF3.OEt2 (10eq.) was added, and the mixture was stirred at room temperature for 20h. After removal of solvent, the residue was passed through a silica gel column using 25% CH2Cl2 in hexanes to give BODIPY as crystalline product after removal of solvent. 4.2.5 Synthesis of 4,4-difluoro-8-(4-methoxyphenyl)-3,5-dimethyl-4-bora-3a, 4a-diaza-s-indacene (3A) Red crystal (500?mg, 21%, isolated yield); m.p?=?188-190?C; Rf (50% Hexane/EtOAC)?=?0.54. 1H NMR (CDCl3, 300?MHz, ppm) deltaH 7.45 (d, J?=?8.8?Hz, 2H, Ar-H), 7.00 (d, J?=?8.8?Hz, 2H, Ar-H), 6.76 (d, J?=?4.1?Hz, 2H, Pi-H), 6.28 (d, J?=?4.1?Hz, 2H, Pi-H), 3.89 (s, 3H, -OCH3), 2.64 (s, 6H, -CH3). 13C NMR (CDCl3, 75?MHz, ppm) deltaC 157.2, 134.7, 132.4, 131.2, 130.5, 126.8, 119.4, 113.9, 113.7, 55.7, 15.1. 19F NMR (CDCl3, 282?MHz, ppm) deltaF -147.95 (q, JBF?=?33.00?Hz) FT-IR (cm-1): 3111, 3019, 2971, 2922, 2850, 1739, 1599, 1573, 1547, 1491, 1446, 1374, 1250, 1218, 1136, 1074, 1026, 960, 882, 840, 784, 762, 739, 713, 589, 527. MALDI-TOF-MS m/z calcd. for C18H17BF2N2O [M]+: 326.1402; found: 326.1281. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
21% | General procedure: To a solution of substituted pyrrole (2eq.) in C2H4Cl2 (40mL) was dropwise added a solution of acylchloride (1eq.) at room temperature under nitrogen. After addition, the solution was stirred at 120C for 16h under nitrogen. The solution was cooled to 0C ice-water bath, triethylamine (5eq.) was then added dropwise at 0C for 10min, and the mixture was stirred for 10min (Fig. 7 ). The ice-water bath was removed. After reaction mixture was reached to room temperature, then BF3.OEt2 (10eq.) was added, and the mixture was stirred at room temperature for 20h. After removal of solvent, the residue was passed through a silica gel column using 25% CH2Cl2 in hexanes to give BODIPY as crystalline product after removal of solvent. 4.2.7 Synthesis of 4,4-difluoro-8-(4-bromophenyl)-3,5-dimethyl-4-bora-3a,4a-diaza-s-indacene (4A) Red powder (390?mg, 21%, isolated yield); m.p?=?180-182?C; Rf (50% Hexane/CHCl3)?=?0.15. 1H NMR (300?MHz, CDCl3, ppm): deltaH 7.62 (AA' part of AA'BB', 2H, Ar-H), 7.37 (BB' part of AA'BB', 2H, Ar-H), 6.68 (d, J?=?4.2?Hz, 2H, Pi-H), 6.28 (d, J?=?4.2?Hz, 2H, Pi-H), 2.65 (s, 6H, -CH3). 13C NMR (75?MHz, CDCl3): deltaC 158.3, 141.1, 134.5, 133.2, 132.0, 131.8, 130.4, 124.7, 120.0, 15.2. 19F NMR (CDCl3, 282?MHz, ppm) deltaF -148.05 (q, JBF?=?33.94?Hz) FT-IR (cm-1): 3140, 2925, 2858, 1738, 1572, 1550, 1535, 1452, 1373, 1264, 1215, 1140, 1073, 986, 877, 828, 795, 765, 731, 652, 580. MALDI-TOF-MS m/z calcd. for C17H14BBrF2N2 [M+H]+: 375.0480; found: 375.0468. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | With bismuth(lll) trifluoromethanesulfonate; In methanol; acetonitrile; at 60℃; for 3h;Sealed tube; | General procedure: To a 1 dram vial was added Bi(OTf)3 (6.7mg, 0.010mmol, 0.025 equiv), indole (47mg, 0.40mmol), 3-vinyl-2-cyclohexenone (97.7mg, 0.80mmol), and acetonitrile/methanol (10:1) solution (0.8mL). The vial was sealed with a PFTE/silicone-lined septum cap. The reaction was heated to 60C and allowed to stir at this temperature for 3h. The mixture was cooled and concentrated under reduced pressure. The crude reaction mixture was purified by flash column chromatography on silica gel (hexanes/ethyl acetate=80:20 to 70:30) to yield a white solid (82.1mg, 0.343mmol, 86%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Multi-step reaction with 3 steps 1: tetrahydrofuran / 16 h / 0 - 20 °C 2: sodium methylate / 2 h / 20 °C 3: sodium hydroxide / N,N-dimethyl-formamide / 2 h / 20 °C | ||
Multi-step reaction with 3 steps 1: tetrahydrofuran / 16 h / 0 - 20 °C 2: methanol / 2 h / 20 °C 3: sodium hydroxide / N,N-dimethyl-formamide / 2 h / 20 °C |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
16% | With copper; potassium carbonate; N,N`-dimethylethylenediamine; In toluene; at 135℃; for 72h;Inert atmosphere; | General procedure: To a suspension of aryl iodide or aryl bromide (1.0 equiv.), copper powder (0.2 equiv.), potassium carbonate (1.5 equiv.), and NH nucleophile (1.2 equiv.) in dry toluene (0.2 M), was added Nu,Nu' -dimethylethylenediamine (0.2 equiv.) under argon. The reaction mixture was heated at 135C (time indicated), cooled to RT and filtered through a pad of Celite eluting with AcOEt. The filtrate was concentrated and purified by flash chromatography (cyclohexane/ AcOEt then AcOEt/CH3OH) to furnish the pure coupling product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
4% | General procedure: Probe 1 was synthesized according to known literature 1. To a dry dichloromethane (CH2Cl2) solution (150 mL) of <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (810.0 mg, 10.0 mmol) at -78 C under an argon atmosphere, a solution of methyl chlorooxoacetate (428.8 mg, 3.5 mmol) in dry CH2Cl2 (50 mL) was added dropwise over 1 hour, and the mixture was stirred at this temperature for 5 hours, before the sequential addition of Et3N (2.1 mL, 15.0 mmol) and BF3OEt2 (3.1 mL, 24.1 mmol). The mixture was slowly warmed to room temperature (RT), and further stirred at RT for 6 hours. After removing the solvent, the residues were further purified by a silica gel column chromatograph using petroleum ether (PE)/CH2Cl2 (v/v: 3/2) as the mobile phase to afford probe 1 as a red solid (68 mg, yield: 7 %). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
10% | General procedure: Probe 1 was synthesized according to known literature 1. To a dry dichloromethane (CH2Cl2) solution (150 mL) of <strong>[636-41-9]2-methyl-1H-pyrrole</strong> (810.0 mg, 10.0 mmol) at -78 C under an argon atmosphere, a solution of methyl chlorooxoacetate (428.8 mg, 3.5 mmol) in dry CH2Cl2 (50 mL) was added dropwise over 1 hour, and the mixture was stirred at this temperature for 5 hours, before the sequential addition of Et3N (2.1 mL, 15.0 mmol) and BF3OEt2 (3.1 mL, 24.1 mmol). The mixture was slowly warmed to room temperature (RT), and further stirred at RT for 6 hours. After removing the solvent, the residues were further purified by a silica gel column chromatograph using petroleum ether (PE)/CH2Cl2 (v/v: 3/2) as the mobile phase to afford probe 1 as a red solid (68 mg, yield: 7 %). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
11.3% | General procedure: The general procedure for the synthesis and purification of methylsubstituted BODIPYs is as following. Dichloromethane(50 mL) containing methyl substituted pyrrole (2 mmol) and adrop of trifluoroacetic acid were stirred at room temperature.Then 2-formylpyrrole or 2-carbonylpyrrole (2.3 mmol) dissolvedin dichloromethane (25 ml) was added dropwisely. The resultingmixturewas stirred until TLC showed the complete consumptionof 2-formylpyrrole or 2-carbonylpyrrole. After that triethylamine(7 mL) in dichloromethane (20 mL) was added to the reactionmixture, which was followed by the slow addition ofborontrifluoride-etherate (10 mL) in dichloromethane (20 mL)to the reaction mixture. Ice cooling was applied during theseadditions. Solvent was removed by vacuum distillation.Purification was carried out by column chromatography withsilica gel (200-300 mesh) and the eluent solvent is n-hexane/CH2Cl2 (90:10 v/v). Column chromatography was repeatedtwice or more to completely purify the product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
22.6% | General procedure: The general procedure for the synthesis and purification of methylsubstituted BODIPYs is as following. Dichloromethane(50 mL) containing methyl substituted pyrrole (2 mmol) and adrop of trifluoroacetic acid were stirred at room temperature.Then 2-formylpyrrole or 2-carbonylpyrrole (2.3 mmol) dissolvedin dichloromethane (25 ml) was added dropwisely. The resultingmixturewas stirred until TLC showed the complete consumptionof 2-formylpyrrole or 2-carbonylpyrrole. After that triethylamine(7 mL) in dichloromethane (20 mL) was added to the reactionmixture, which was followed by the slow addition ofborontrifluoride-etherate (10 mL) in dichloromethane (20 mL)to the reaction mixture. Ice cooling was applied during theseadditions. Solvent was removed by vacuum distillation.Purification was carried out by column chromatography withsilica gel (200-300 mesh) and the eluent solvent is n-hexane/CH2Cl2 (90:10 v/v). Column chromatography was repeatedtwice or more to completely purify the product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
83% | General procedure: To a solution of isochroman 1a (0.1 mmol, 1.0 equiv) in CH2Cl2 (1.0 mL) was added DDQ (0.12 mmol, 1.2 equiv) at rt. The mixture was stirred at that temperature for 0.5 h. After that, indole or pyrrole (0.15 mmol, 1.5 equiv) was added, and the mixture was stirred for another 3 h. The volatiles were removed under reduced pressure and the residue was purified by flash chromatography on silica gel using CH2Cl2 as an eluent to give the desired product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
at 300 - 900℃; Inert atmosphere; Pyrolysis; |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | With (Ra)-4-hydroxy-2,6-bis(2,4,6-tricyclohexylphenyl)dinaphtho-[1,3,2]dioxaphosphepine 4-oxide; In 1,2-dichloro-ethane; at -20 - 40℃; for 48h;Green chemistry; | Using Ar1 as a 4-hydroxyphenyl group,Ar2 is 2-(1-naphthalenesulfonamido)phenyl,A triarylmethanol in which Ar3 is a phenyl group and 2-methylpyrrole are used as a reaction raw material, and a reaction is carried out by a chiral phosphoric acid catalyst. The specific implementation process is as follows:Triarylmethanol (96.2 mg, 0.2 mmol) and2-Methylpyrrole (32.4 mg, 0.4 mmol) was dissolved in dichloromethane (3.6 mL).And cool the mixture to -20 C,A solution of chiral phosphoric acid (29.8 mg, 0.030 mmol) in dichloromethane (0.4 mL) was slowly added dropwise.Thereafter, the mixture was stirred at 40 C for 48 hours.The reaction solution was directly applied to silica gel column chromatography to obtain 92.9 mg of the desired product Id as a light yellow foamy solid.The calculated yield was 85%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With (Ra)-4-hydroxy-2,6-bis(2,4,6-tricyclohexylphenyl)dinaphtho-[1,3,2]dioxaphosphepine 4-oxide; In 1,2-dichloro-ethane; at 20℃; for 48h;Green chemistry; | A triarylmethanol and a 2-methylpyrrole having Ar1 as a 4-hydroxyphenyl group, Ar2 being a 2-fluoro-4-methoxyphenyl group, and Ar3 being a phenyl group are used as a reaction raw material.The reaction is carried out using a chiral phosphoric acid catalyst. The specific implementation process is as follows:Triarylmethanol (64.8 mg, 0.2 mmol) and2-Methylpyrrole (32.4 mg, 0.4 mmol) was dissolved in 1,2-dichloroethane (3.6 mL) at room temperature.Slow addition of chiral phosphoric acid (14.9 mg, 0.015 mmol)A solution of 1,2-dichloroethane (0.4 mL).Thereafter, it was stirred at room temperature for 48 hours.The reaction solution was directly applied to silica gel column chromatography to obtain 80.6 mg of the desired product as a pale yellow foamy solid.The calculated yield was 93%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
93% | With (Ra)-4-hydroxy-2,6-bis(2,4,6-tricyclohexylphenyl)dinaphtho-[1,3,2]dioxaphosphepine 4-oxide; In 1,2-dichloro-ethane; at 0℃; for 48h;Green chemistry; | A reaction is carried out by using a chiral phosphoric acid catalyst using a triarylmethanol in which Ar1 is a 4-hydroxyphenyl group, Ar2 is a 2-methoxyphenyl group, and Ar3 is a 4-fluorophenyl group, and 2-methylpyrrole is used as a reaction raw material.The specific implementation process is as follows:Triarylmethanol (62.8 mg, 0.2 mmol) and 2-methylpyrrole (32.4 mg, 0.4 mmol) were dissolved in 1,2-dichloroethane (3.6 mL), and the mixture was cooled to 0 C, slowly drip A solution of chiral phosphoric acid (14.9 mg, 0.015 mmol) in 1,2-dichloroethane (0.4 mL) was added. Thereafter, the mixture was stirred at 0 C for 48 hours.The reaction solution was directly applied to silica gel column chromatography to obtain 72.1 mg of the desired product Ig pale yellow foamy solid.The calculated yield was 93%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | With (Ra)-4-hydroxy-2,6-bis(2,4,6-tricyclohexylphenyl)dinaphtho-[1,3,2]dioxaphosphepine 4-oxide; In 1,2-dichloro-ethane; at 0℃; for 48h;Green chemistry; | Ar1 is 4-hydroxyphenyl and Ar2 is 2-methoxyphenyl.Ar3 is a 2-naphthyltriarylmethanol and 2-methylpyrrole as a reaction raw material, and is reacted with a chiral phosphoric acid catalyst. The specific implementation process is as follows:Triarylmethanol (71.2 mg, 0.2 mmol) and 2-methylpyrrole (32.4 mg, 0.4 mmol) were dissolved in 1,2-dichloroethane (3.6 mL), and the mixture was cooled to 0 C.Slow addition of chiral phosphoric acid (14.9 mg, 0.015 mmol)A solution of 1,2-dichloroethane (0.4 mL). Thereafter, the mixture was stirred at 0 C for 48 hours.The reaction solution was directly applied to silica gel column chromatography to obtain 88.7 mg of the desired product Ii as a pale yellow foamy solid.The calculated yield was 92%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With (Ra)-4-hydroxy-2,6-bis(2,4,6-tricyclohexylphenyl)dinaphtho-[1,3,2]dioxaphosphepine 4-oxide; In 1,2-dichloro-ethane; at 0℃; for 48h;Green chemistry; | A triarylmethanol in which Ar1 is a 4-hydroxyphenyl group, Ar2 is a 2-methoxyphenyl group, Ar3 is a phenyl group, and 2-methylpyrrole is used as a reaction raw material, and a reaction is carried out by a chiral phosphoric acid catalyst. The specific implementation process is as follows:Triarylmethanol (61.2 mg, 0.2 mmol) and 2-methylpyrrole (32.4 mg, 0.4 mmol) were dissolved in 1,2-dichloroethane (3.6 mL).And cool the mixture to 0 C,A solution of chiral phosphoric acid (14.9 mg, 0.015 mmol) in 1,2-dichloroethane (0.4 mL) was slowly added dropwise. Thereafter, the mixture was stirred at 0 C for 48 hours.The reaction equation is as follows:The reaction solution was directly used for silica gel column chromatography to obtain 71.7 mg of a pale yellow foamy solid of the desired product Ia.The calculated yield was 97%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With ammonium iodide; 1,10-Phenanthroline; acetic acid; In 1,4-dioxane; at 100℃; for 6h;Sealed tube; | General procedure: A Schlenk tube (25 mL) was charged with indole (0.3 mmol), ethyl arylsulfinate (0.4 mmol), NH4I (20 mol%), and 1,10-phenanthroline (10 mol%). 1,4-Dioxane (2 mL) and HOAc (0.5 mL) were added under air atmosphere, the tube was sealed and heated in an oil bath at 100 C for 6 h. The crude mixture was allowed to cool to room temperature. Then, ethyl acetate and saturated aq. solution of NaCl (5 mL) were added and the layers separated. The aqueous phase was washed three times with ethyl acetate (5 mL x 3). The combined organic layers were dried over anhydrous MgSO4 and concentrated in vacuo. The crude was purified by flash column chromatography with Al2O3 (petroleum ether/EtOAc) giving desired products 3a-z and 4a-t. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | With ammonium iodide; 1,10-Phenanthroline; acetic acid; In 1,4-dioxane; at 100℃; for 6h;Sealed tube; | General procedure: A Schlenk tube (25 mL) was charged with indole (0.3 mmol), ethyl arylsulfinate (0.4 mmol), NH4I (20 mol%), and 1,10-phenanthroline (10 mol%). 1,4-Dioxane (2 mL) and HOAc (0.5 mL) were added under air atmosphere, the tube was sealed and heated in an oil bath at 100 C for 6 h. The crude mixture was allowed to cool to room temperature. Then, ethyl acetate and saturated aq. solution of NaCl (5 mL) were added and the layers separated. The aqueous phase was washed three times with ethyl acetate (5 mL x 3). The combined organic layers were dried over anhydrous MgSO4 and concentrated in vacuo. The crude was purified by flash column chromatography with Al2O3 (petroleum ether/EtOAc) giving desired products 3a-z and 4a-t. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43% | With ammonium iodide; 1,10-Phenanthroline; acetic acid; In 1,4-dioxane; at 100℃; for 6h;Sealed tube; | General procedure: A Schlenk tube (25 mL) was charged with indole (0.3 mmol), ethyl arylsulfinate (0.4 mmol), NH4I (20 mol%), and 1,10-phenanthroline (10 mol%). 1,4-Dioxane (2 mL) and HOAc (0.5 mL) were added under air atmosphere, the tube was sealed and heated in an oil bath at 100 C for 6 h. The crude mixture was allowed to cool to room temperature. Then, ethyl acetate and saturated aq. solution of NaCl (5 mL) were added and the layers separated. The aqueous phase was washed three times with ethyl acetate (5 mL x 3). The combined organic layers were dried over anhydrous MgSO4 and concentrated in vacuo. The crude was purified by flash column chromatography with Al2O3 (petroleum ether/EtOAc) giving desired products 3a-z and 4a-t. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
28% | Pyrrolyldiketone 3a (195 mg, 0.8 mmol) was dissolved in distilleddichloromethane (60 mL). After adding 0.2 mL BF3OEt2, the mixtureturned brown quickly. A solution of 2-methylpyrrole (0.2 mL) indistilled dichloromethane (2 mL) was dropwise added. The reactionmixture was stirred at room temperature (35 C) and monitored withTLC. After dipyrrolyldiketone 3a was exhausted, 2 mL of Et3N wasadded into the mixture. The reaction mixture was stirred for 3 h beforethe subsequent addition of BF3OEt2 (3 mL) through syringe. After themixture was further stirred for 1 h, it was poured into water andextracted with dichloromethane (30 mL 3). Then, the organic phasewas combined, washed with saturated NaHCO3 solution, dried overanhydrous Na2SO4, filtered and rotary evaporated. The crude productwas purified by column chromatography on silica gel (hexane/EtOAc 4/1, v/v) and was further recrystallized from hexane to give probe 1 asreddish powders in 28% yield (80 mg). 1H NMR (300 MHz, CDCl3) 9.59(s, 1H), 6.72 (d, J 3.8 Hz, 1H), 6.19 (d, J 3.9 Hz, 1H), 6.07 (s, 1H),5.85 (s, 1H), 2.59 (s, 6H), 2.31 (s, 3H), 1.96 (s, 3H), 1.89 (s, 3H). 13CNMR (126 MHz, CDCl3) 177.9, 160.1, 156.4, 143.3, 139.2, 138.1,134.1, 131.8, 130.1, 128.7, 127.2, 121.8, 118.9, 114.1, 15.2, 15.0, 13.7,13.5, 13.2. HRMS (APCI) calcd. for C19H21BF2N3O [M H]: 356.1740,found 356.1740. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
23% | General procedure: Pyrrolyldiketone 3a (195 mg, 0.8 mmol) was dissolved in distilleddichloromethane (60 mL). After adding 0.2 mL BF3OEt2, the mixtureturned brown quickly. A solution of 2-methylpyrrole (0.2 mL) indistilled dichloromethane (2 mL) was dropwise added. The reactionmixture was stirred at room temperature (35 C) and monitored withTLC. After dipyrrolyldiketone 3a was exhausted, 2 mL of Et3N wasadded into the mixture. The reaction mixture was stirred for 3 h beforethe subsequent addition of BF3OEt2 (3 mL) through syringe. After themixture was further stirred for 1 h, it was poured into water andextracted with dichloromethane (30 mL 3). Then, the organic phasewas combined, washed with saturated NaHCO3 solution, dried overanhydrous Na2SO4, filtered and rotary evaporated. The crude productwas purified by column chromatography on silica gel (hexane/EtOAc 4/1, v/v) and was further recrystallized from hexane to give probe 1 asreddish powders in 28% yield (80 mg). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | Stage #1: 2-methyl-1H-pyrrole With trichlorophosphate In N,N-dimethyl-formamide at 0 - 20℃; for 3h; Stage #2: potassium formate In water; N,N-dimethyl-formamide at 0 - 105℃; for 3h; Inert atmosphere; | 5.11.8 General procedure H for the synthesis of compounds 35b-35x General procedure: A mixture of 30 (4.06g, 50mmol) in anhydrous DMF (60mL) was stirred at 0°C, the solution was added dropwise POCl3 (9.32mL, 100mmol). The mixture was stirred at ambient temperature for 3h. Then the mixture was added dropwise 5M KOAc (24.54g, 250mmol) solution at 0°C, and the solution was stirred at 105°C under nitrogen for 3h. After cooling, the mixture was poured into water and was extracted with ethyl acetate (100mL×3). The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated. The resulting crude product was purified by silica gel column chromatography (10-30% EtOAc/petroleum ether) to yield 31 (yield, 70%) as a brown solid. (0145) A mixture of AlCl3 (12g, 90mmol) in anhydrous dichloromethane (60mL) was stirred at 0°C, the solution was added dropwise acetyl chloride (3.2mL, 45mmol). Then the mixture was added compound 31 (3.27g, 30mmol) in four batches at 0°C, and the solution was stirred at ambient temperature for another 4h. The reaction was monitored by TLC. Upon completion, the reaction mixture was quenched with saturated NH4Cl (100mL) and was extracted with dichloromethane (100mL×3). The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated. The resulting crude product was purified by silica gel column chromatography (10-20% EtOAc/petroleum ether) to yield 32 (yield, 71%) as a white solid. (0146) A mixture of compound 32 (3.02g, 20mmol) in tetrahydrofuran (30mL) was stirred at 0°C, the solution was added NBS (4.27g, 24mmol). The mixture was stirred at ambient temperature for 5h. Then the reaction was partitioned between water and ethyl acetate, the aqueous layer was extracted with additional ethyl acetate twice. The combined organic layers was washed with brine, dried over Na2SO4, filtered, and concentrated. The residue was chromatographed, eluting with a gradient of 5-20% EtOAc/petroleum ether to afford compound 33 (2.1g, yield, 46%) as a brown solid. (0147) A mixture of 34f, 34i - 34s, 34u - 35x (20mmol), pentane-2,4-dione (23.6mmol), NaOAc (120mmol) in EtOH (20mL) and H2O (20mL) was degassed under a stream of nitrogen. The resulting brown solution was heated at 85°C for about 3h. After cooling, the mixture was poured into water and was extracted with ethyl acetate (150mL×3). The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated. The resulting crude product was purified by silica gel column chromatography (10-30% EtOAc/petroleum ether) to yield 3f, 3i - 3s, 3u - 3x (yield, 68-90%) as a brown solid. (0148) A mixture of 3f, 3i - 3s, 3u - 3x (10mmol) in anhydrous DMF (20mL) was stirred at 0°C, the solution was added dropwise POCl3 (20mmol). The mixture was stirred at ambient temperature for about 3h. Then the mixture was added dropwise 5M KOAc (50mmol) solution at 0°C, and the solution was stirred at 105°C under nitrogen for about 3h. After cooling, the mixture was poured into water and was extracted with ethyl acetate (100mL×3). The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated. The resulting crude product was purified by silica gel column chromatography (10-30% EtOAc/petroleum ether) to yield 5f, 5i - 5s, 5u - 5x (yield, 51-78%) as a brown solid. (0149) A flask was charged with compound 33 (0.28g, 1.2mmol), 4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pyridine (0.3g, 1.44mmol) or N,N-dimethyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)aniline (0.36g, 1.44mmol), PdCl2(dppf) (0.09g, 0.12mmol), K2CO3 (0.83g, 6mmol) and sparged with nitrogen. Degassed dioxane (9mL) and water (3mL) was added and the mixture was heated at 100°C for 4h. The reaction mixture was partitioned between water and ethyl acetate, the aqueous layer was extracted with additional ethyl acetate twice. The combined organic layers were washed with brine, dried over Na2SO4, filtered, and concentrated. The crude product was purified by silica gel column chromatography (gradient elution, 10-30% EtOAc/petroleum ether) to yield 5h and 5t (yield, 77%, 77%) as a brown solid. (0150) A mixture of 5b - 5x (1.2mmol), Na2S2O5 (0.023g, 0.12mmol), 4-(4-methylpiperazin-1-yl)benzene-1,2-diamine (0.25g, 1.2mmol) or 4-morpholinobenzene-1,2-diamine (0.23g, 1.2mmol) in DMF (10mL) was degassed under a stream of nitrogen. The resulting brown solution was heated at 140°C overnight. The cooled reaction was purified by silica gel column chromatography (gradient elution, 2-5% MeOH/dichloromethane) to afford 35b - 35x (yield, 57-71%) as a white solid. (0151) 5-Methyl-1H-pyrrole-2-carbaldehyde (31). Compound 31 was prepared according to general procedure H on a 50mmol scale. Purification by column chromatography (10-30% EtOAc/petroleum ether) afforded the title compound (3.8g, 34.82mmol, 70% yield). [M+ H]+: 110.1. 1H NMR (400MHz, DMSO-d6) δ 11.87 (s, 1H), 9.30 (s, 1H), 7.01-6.72 (m, 1H), 6.10-5.91 (m, 1H), 2.24 (s, 3H). |
Tags: 636-41-9 synthesis path| 636-41-9 SDS| 636-41-9 COA| 636-41-9 purity| 636-41-9 application| 636-41-9 NMR| 636-41-9 COA| 636-41-9 structure
[ 1351479-09-8 ]
(1H-Pyrrol-2-yl)methanamine hydrochloride
Similarity: 0.78
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H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
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