Structure of 760-58-7
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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| CAS No. : | 760-58-7 |
| Formula : | C7H9NO2 |
| M.W : | 139.15 |
| SMILES Code : | CC(C)/C=C(C#N)/C(O)=O |
| MDL No. : | MFCD22377852 |
| InChI Key : | JYFREZOLRUHBAQ-ZZXKWVIFSA-N |
| Pubchem ID : | 5956093 |
| GHS Pictogram: |
|
| Signal Word: | Warning |
| Hazard Statements: | H302+H312+H332 |
| Precautionary Statements: | P280 |
| Num. heavy atoms | 10 |
| Num. arom. heavy atoms | 0 |
| Fraction Csp3 | 0.43 |
| Num. rotatable bonds | 2 |
| Num. H-bond acceptors | 3.0 |
| Num. H-bond donors | 1.0 |
| Molar Refractivity | 36.81 |
| TPSA ? Topological Polar Surface Area: Calculated from |
61.09 Ų |
| Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.26 |
| Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.3 |
| Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.18 |
| Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
0.54 |
| Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
0.46 |
| Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.95 |
| Log S (ESOL):? ESOL: Topological method implemented from |
-1.39 |
| Solubility | 5.67 mg/ml ; 0.0408 mol/l |
| Class? Solubility class: Log S scale |
Very soluble |
| Log S (Ali)? Ali: Topological method implemented from |
-2.18 |
| Solubility | 0.913 mg/ml ; 0.00656 mol/l |
| Class? Solubility class: Log S scale |
Soluble |
| Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-0.23 |
| Solubility | 82.9 mg/ml ; 0.596 mol/l |
| Class? Solubility class: Log S scale |
Soluble |
| GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
| BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
| P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
| CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
| CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
| CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
| CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
| CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
| Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.23 cm/s |
| Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
| Ghose? Ghose filter: implemented from |
None |
| Veber? Veber (GSK) filter: implemented from |
0.0 |
| Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
| Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
| Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
| PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
| Brenk? Structural Alert: implemented from |
2.0 alert: heavy_metal |
| Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
| Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.33 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 89% | With pyrrolidine; pyridine; at 20℃; | Into a 100-mL round-bottom flask, was placed 2-cyanoacetic acid (2 g, 23.51 mmol, 1.00 eq.), pyridine (10 mL), 2-methylpropanal (1.85 g, 25.66 mmol, 1.09 eq.), pyrrolidine (400 mg, 5.62 mmol, 0.24 eq.). The resulting solution was stirred for 1.5 h at rt. The reaction was then quenched by the addition of hydrogen chloride:H20 (12:20 mL). The resulting solution was extracted with ethyl acetate (2 x 20 mL). The organic layers combined and dried over anhydrous sodium sulfate and concentrated under vacuum. This resulted in 2.9 g (89%) of 2-cyano-4-methylpent-2-enoic acid as a light yellow solid. |
| 83% | With ammonium acetate; In toluene;Reflux; | Step 1 - 2-Cyano-4-methyl-2-pentenoic acidA stirred suspension of cyanoacetic acid (42.5g, 0.5 mol), ammonium acetate(1 .56g, 0.02 mol, 4 mol%) and isobutyraldehyde (55ml, 39.66g, 0.55 mol, 1 .1 eq) in toluene (130ml) was heated to reflux with Dean-Stark removal of water. When generation of water ceased, the reaction mixture was cooled to room temperature and concentrated under reduced pressure to give a yellow solid (79.5g). Hexane (150ml) was added and the suspension was stirred at 400rpm for 1 hour. The solid was filtered, washed with hexane (2 x 50ml) and dried to provide the title compound as a yellow crystalline solid (58.5g, 83% yield). |
| 11.2 g | To a solution of 2-cyanoacetic acid (8.7g, 102 mmol) in methanol (200mL) was added 2-methylpropanal (18.6 mL, 204 mmol) and the solution was stirred with a slight exotherm noted. After 30 minutes, added piperidine (1 1.1 mL, 1 12 mmol) and continued stirring for 1 h before removing solvent in vacuo with gentle heating. The thick material was diluted with ether and washed with 125mL of 1.0M HC1 and then washed with brine. The organic phase was dried over sodium sulfate and concentrated to afford a colorless oil weighing 11.2 g of 2- cyano-4-methylpent-2-enoic acid which precipitated on standing. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 100% | Step 3 - 2-Cyano-4-methylpentanoic acid (by sodium borohydride reduciton) A suspension of 4-methyl-2-cyano-2-butenoic acid (10g, 71 .9mmol) in water (60ml_) was cooled to 0C with an ice bath, then NaHCO3 (7.25g, 1 .2 eq.) was added slowly to the mixture. The mixture is stirred for 15 mins to provide a clear solution, then NaBH4 (5.44g, 2 eq.) was added slowly at 0C and the reaction was stirred at room temperature for 5h. The mixture was cooled down to 0C and a solution of HCI 20% (44ml_, 4 eq.) was slowly added to the mixture (pH= 2-3). The product was extracted with EtOAc (3x 30ml_) and the combined organic phases were washed with water (3x 20 ml_), dried over MgSO , filtered and evaporated under reduced pressure to give material identical to that obtained by the hydrogenation route (10.2g, 100%). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| With bromo-tris(1-pyrrolidinyl)phosphonium hexafluorophosphate; In dichloromethane; at 0℃;Inert atmosphere; | Step 4To a 25 mL round bottom flask, (R)-4-(4-phenoxyphenyl)-6-(piperidin-3-yl)-lH- pyrazolo[4,3-c]pyridin-3-amine (O.lg, 0.00025 mole) and <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (0.046g, O.00033mole) were taken in dry DCM (lmL) and the solution was cooled to 0C under argon atmosphere. To above, PyBrOP (0.133g, 0.000285mole) was added slowly followed by triethylamine (0.1 mL, 0.000778 mole) at 0 C. The completion of the reaction was monitored on TLC using MeOH: DCM (1 :9) as a mobile phase. After completion of the reaction the reaction, the crude material was directly loaded onto a column packed with 100- 200 mesh sized silica eluting with neat ethyl acetate to afford 38 mg of the title compound. MS (pos. ion) m/z: 507 (M+l). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 40% | With N-ethyl-N,N-diisopropylamine; N-[(dimethylamino)-3-oxo-1H-1,2,3-triazolo[4,5-b]pyridin-1-yl-methylene]-N-methylmethanaminium hexafluorophosphate; In dichloromethane; at 20℃; for 4h;Inert atmosphere; | Step 5. To a mixture of (R)-3-(4-(2,3difluorophenoxy)-2-fluorophenyl)-1-(piperidin-3-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine (100 mg, 0.23 mmol, 1.0 eq), <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (38 mg, 0.27 mmol, 1.2 eq) and DIEA (88 mg, 0.68 mmol, 3.0 eq) in 10 ml DCM was added HATU (130 mg, 0.34 mmol, 1.5 eq). The reaction mixture was stirred for 4 h at RT under N2. The mixture was purified by Pre-HPLC to give the title compound (25 mg, 40% yield). LCMS: m/z (562.2) (M+H)+. |
| 40% | With N-ethyl-N,N-diisopropylamine; HATU; In dichloromethane; at 20℃; for 4h;Inert atmosphere; | Step 5 To a mixture of (R)-3-(4-(2,3-difluorophenoxy)-2-fluorophenyl)-1-(piperidin-3-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine (100 mg, 0.23 mmol, 1.0 eq), <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (38 mg, 0.27 mmol, 1.2 eq) and DIEA (88 mg, 0.68 mmol, 3.0 eq) in 10 ml DCM was added HATU (130 mg, 0.34 mmol, 1.5 eq). The reaction mixture was stirred for 4 h at RT under N2. The mixture was purified by Pre-HPLC to give the title compound (25 mg40% yield). LCMS: m/Z+ (562.2) (M+H)+1HNMR (400 MHz, CDCl3): delta 0.784?1.186 (m, 7H), 1.765?2.254 (m, 5H), 2.861?4.937 (m, 4H), 6.218 (m, 0.4H), 6.857?7.600 (m, 6H), 8.255 (s, 1H) and 9.888 (m, 1H). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 0.2 g | With triethylamine; bromo-tris(1-pyrrolidinyl)phosphonium hexafluorophosphate; In dichloromethane; at 0℃; for 0.25h;Inert atmosphere; | To a 25 mL one necked round bottom flask, benzyl (2-(4-chlorobenzamido)-l- (pyrrolidin-2-ylmethyl)-lH-benzo[d]imidazol-5-yl)methyl((S)-3,3-dimethylbutan-2-yl)carbamate TFA salt (0.55 g, 0.00091 mole), <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (0.380 g, 0.00274 mole) were added in CH2C12 (3 mL), followed by addition of PyBrOP (0.466 g, 0.001 mole) and TEA (0.63 mL,0.0045 mole) at 0 C under nitrogen atmosphere and the reaction mixture was stirred for 15 min at same temperature. After the completion of the reaction, the reaction mixture was purified using column purification by eluting compound with 25% ethyl acetate in hexanes to yield 0.2g of benzyl (2-(4-chloro-benzamido)-l-((l-(2-cyano-4-methylpent-2-enoyl)pyrrolidin-2- yl)methyl)-lH-benzo[d]imidazol-5-yl)methyl((S)-3,3-dimethylbutan-2-yl)carbamate. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 0.27 g | With triethylamine; bromo-tris(1-pyrrolidinyl)phosphonium hexafluorophosphate; In dichloromethane; at 0℃; for 0.5h;Sealed tube; | To a 25 mL sealed tube under nitrogen atmosphere, benzyl (2-(4-(difluoromethyl)- benzamido)-l-(pyrrolidin-2-ylmethyl)-lH-benzo[d]imidazol-5-yl)methyl((S)-3,3-dimethylbutan- 2-yl)carbamate as TFA salt (0.5 g, 0.000683 mole), <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (0.284 g, 0.002049 mole) and PyBrOP (0.350 g, 0.000751 mole) were taken in CH2C12 (5 mL) and cooled to 0 C. TEA (0.47 mL, 0.003415 mole) was added drop wise to a reaction mixture and to stir at 0 C for 30 min. After completion of the reaction, water was added to reaction mixture and product was extracted with EtOAc. The combined organic layer was dried over a2S04 and evaporated to get crude. The crude compound was purified by column purification using 60-120 mesh size neutral silica by eluting with 20% EtOAc in hexanes to yield 0.27g of benzyl (l-((l-(2- cyano-4-methylpent-2-enoyl)pyrrolidin-2-yl)methyl)-2-(4-(difluoromethyl)benzamido)-lH- benzo[d]imidazol-5-yl)methyl((S)-3,3-dimethylbutan-2-yl)carbamate. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 10 mg | With N-ethyl-N,N-diisopropylamine; HATU; In N,N-dimethyl-formamide; at 20℃; for 1.66667h; | To a solution of (R)-5-(difluoromethyl)-N-(5-(hydroxymethyl)-l-(pyrrolidin-2- ylmethyl)-lH-benzo[d]imidazol-2-yl)thiophene-2-carboxamide (27 mg, 0.07 mmol), 2-cyano-4- methyl-pent-2-enoic acid (13.87 mg, 0.10 mmol), HATU (25.24 mg, 0.07 mmol), DIPEA (0.01 mL, 0.07 mmol) in DMF (10 mL) was stirred at rt for 100 minutes. The reaction mixture was evaporated to afford an oil which was worked up with DCM and water. The organic layers were dried (MgS04) and concentrated and the oil was purified by chromatography to obtain 10 mg of (R)-N-( 1 -((1 -(2-cyano-4-methylpent-2-enoyl)pyrrolidin-2-yl)methyl)-5-(hydroxymethyl)- 1 H- benzo[d]-imidazol-2-yl)-5-(difluoromethyl)thiophene-2-carboxamideas white solid. MS (pos. ion) m/z: 528 (M+l). |
[ 760-58-7 ]
[ 1575820-59-5 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 68% | With N-ethyl-N,N-diisopropylamine; HATU; In N,N-dimethyl-formamide; at 20℃; for 4h; | To the solution of 5-(difluoromethyl)-N-(5-((2,6-dimethylmorpholino)methyl)-l-((R)- pyrrolidin-2-ylmethyl)-lH-benzo[d]imidazol-2-yl)thiophene-2-carboxamide (65 mg, 0.13 mmol), DIPEA (0.07 mL, 0.39 mmol), <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (53.88 mg, 0.39 mmol) and DMF (4 mL) was stirred for 10 minutes and then added HATU (98.09 mg, 0.26 mmol). The reaction mixture was stirred at room temperature. After 4 h, the crude mixture was concentrated and purified by chromatography to obtain 55 mg (68%) of N-(l-(((R)-l-(2-cyano-4-methylpent- 2-enoyl)pyrrolidin-2-yl)methyl)-5-((2,6-dimethylmorpholino)methyl)-lH-benzo[d]imidazol-2- yl)-5-(difluoromethyl)thiophene-2-carboxamide as off white solid. MS (pos. ion) m/z: 625 (M+l). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 47.4 mg | With N-ethyl-N,N-diisopropylamine; HATU; In N,N-dimethyl-formamide; at 20℃; | (R)-3-Methyl-N-( 1 -(pyrrolidin-2-ylmethyl)- 1 H-benzo[d]imidazol-2-yl)benzamide (prepared as in Example 50 but substituting 3-methylbenzoic acid for 5- (difluoromethyl)thiophene-2-carboxylic acid) was dissolved in N,N-dimethylformamide (10 mL). DIEA (231.9 mg, 1.79 mmol, 4.00 equiv), HATU (255.8 mg, 0.67 mmol, 1.50 equiv), and <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (93.6 mg, 0.67 mmol, 1.50 equiv) were added to the reaction mixtureand the resulting solution was stirred overnight at rt. The reaction was quenched with water and the resulting solution was extracted with dichloromethane, and the combined organic layers were concentrated under vacuum. The crude product (100 mg) was purified by Prep HPLC to afford 47.4 mg of (R)-N-(l-((l-(2-cyano-4-methylpent-2-enoyl)pyrrolidin-2-yl)methyl)-lH- benzo[d]imidazol-2-yl)-3-methylbenzamide as a white solid. LC-MS (m/z): 456.3 [M+l]. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 173 mg | With triethylamine; HATU; In N,N-dimethyl-formamide; at 20℃; | (R)-5-(Difluoromethyl)-N-(l-(pyrrolidin-3-yl)-lH-benzo[d]imidazol-2-yl)thiophene-2- carboxamide (prepared as in Example 50 but substituting (R)-tert-butyl 3-aminopyrrolidine-l- carboxylate for (R)-tert-butyl 2-(aminomethyl)pyrrolidine-l -carboxylate) was dissolved in 20 mL of DMF. TEA (335.1 mg, 3.31 mmol), <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (153.6 mg, 1.10 mmol, and HATU (629.5 mg, 1.66 mmol) were added to the reaction mixture. The resulting solution was stirred overnight at rt and then concentrated under vacuum. The crude product was purified by Prep-HPLC to afford 173 mg of (R)-N-(l-(l-(2-cyano-4-methylpent-2- enoyl)pyrrolidin-3-yl)-lH-benzo[d]imidazol-2-yl)-5-(difluoromethyl)thiophene-2-carboxamide LC-MS m/z: 484.2 [M+l]. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 0.19 g | With triethylamine; bromo-tris(1-pyrrolidinyl)phosphonium hexafluorophosphate; In dichloromethane; at 0℃; for 0.25h;Inert atmosphere; | To a 50 mL one necked round bottom flask were added benzyl (2-(4-chlorobenzamido)-l- (piperidin-3-yl)-lH-benzo[d]imidazol-5-yl)methyl-((S)-3,3-dimethylbutan-2-yl)carbamate TFA salt (0.5 g,0.7150 mmole), <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (0.298 g, 2.1450 mmole) and CH2CI2 (10 mL); followed by addition of PyBrOP (0.366 g, 0.7860 mmole) and TEA (0.3 mL) at 0 C under nitrogen atmosphere and stirred for 15 min at the same temperature. After completion of the reaction, the reaction mixture was purified using column purification by eluting compound with 20% ethyl acetate in hexanes to yield 0.19 g of benzyl (2-(4- chlorobenzamido)-l-(l-(2-cyano-4-methylpent-2-enoyl)piperidin-3-yl)-lH-benzo[d]imidazol-5 yl)methyl((S)-3,3-dimethylbutan-2-yl)carbamate. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 34 mg | With triethylamine; ((3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)oxy)tri(pyrrolidin-1-yl)phosphonium hexafluorophosphate(V); In dichloromethane; at 20℃; | The mixture of l-(azetidin-3-yl)-3-(2-fluoro-4-phenoxy-phenyl)pyrazolo[3,4- d]pyrimidin-4-amine (80 mg, 0.210 mmol, <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (44.4 mg, 0.320 mmol), PyAOP (121.9 mg, 0.230 mmol) and TEA (0.09 mL, 0.640 mmol) in DCM (3 mL), were stirred overnight at room temperature. The solvent was removed and the residue was purified on a silica gel plate using 6:94 MeOH:CH2Ci2 to get 2-[3-[4-amino-3-(2-fluoro- 4-phenoxy-phenyl)pyrazolo[3,4-d]pyrimidin-l-yl]azetidine-l-carbonyl]-4-methyl-pent-2- enenitrile (34 mg) as white powder. LC-MS (ES, m/z): 498 [M+H]. |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 39.8% | With triethylamine; ((3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)oxy)tri(pyrrolidin-1-yl)phosphonium hexafluorophosphate(V); In dichloromethane; at 20℃; for 1h; | To a solution of <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (30.7 mg, 0.220 mmol), 1- (azetidin-2-ylmethyl)-3-(2-fluoro-4-phenoxy-phenyl)pyrazolo[3,4-d]pyrimidin-4-amine (57.5 mg, 0.150 mmol in DCM (2 mL) was added PyAOP (86.2 mg, 0.160 mmol) and TEA (0.06 mL, 0.440 mmol) and the resulting yellow solution stirred at rt for lh. LCMS showed that the reaction was complete and the crude mixture was directly loaded onto a silica gel cartridge for purification (3 to 5% MeOH: CH2C12). Removal of solvent from cleanest fractions afforded 30mg of the desired compound 2-[2-[[4-amino-3-(2-fluoro-4-phenoxy- phenyl)pyrazolo[3,4-d]pyrimidin-l -yl]methyl]azetidine-l-carbonyl]-4-methyl-pent-2- enenitrile (30mg,0.0586mmol, 39.8% yield) as judged by LCMS. (M+l = 512). |
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 12 mg | With triethylamine; ((3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)oxy)tri(pyrrolidin-1-yl)phosphonium hexafluorophosphate(V); In dichloromethane; at 20℃; for 1h; | To a solution of <strong>[760-58-7]2-cyano-4-methyl-pent-2-enoic acid</strong> (48.12 mg, 0.350 mmol) ,1- (azetidin-3-ylmethyl)-3-(2-fluoro-4-phenoxy-phenyl)pyrazolo[3,4-d]pyrimidin-4-amine (90 mg, 0.230 mmol) in DCM (2 mL) was added PyAOP (134.9 mg, 0.250 mmol) and TEA (0.1 mL, 0.690 mmol) and the resulting yellow solution stirred at rt for lh. LCMS showed that the reaction was completed and the crude mixture was directly loaded onto a silica gel cartridge for purification (0.2 to 3% MeOH: CH2C12). Removal of solvent from cleanest fractions afforded afforded 2-[3-[[4-amino-3-(2-fluoro-4-phenoxy-phenyl)pyrazolo[3,4-d]pyrimidin-l- yl]methyl]azetidine-l-carbonyl]-4-methyl-pent-2-enenitrile (12 mg LCMS. (M+l = 512). |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 0.3 g | To a 25 ml single neck round bottomed flask under nitrogen atmosphere, 2-cyano-4- methylpent-2-enoic acid (0.23 g, 1 .65 mmol) was dissolved in DMF (3 ml) and cooled to 0 C. To this, HATU (0.79 g, 2.06 mmol) was added and stirred at 0 C for 30 minutes. After 30 min, solution of tert-butyl (S)-(6-(methylamino)-l -((4-methylbenzyl)amino)-l-oxohexan-2- yl)carbamate (0.5 g, 1.37 mmol) in DMF (2 ml) and DIPEA (0.71 ml, 4.13 mmol) were added dropwise at 0 C. The reaction mixture was further stirred at 0 C for 1.5 h and then diluted with cold water and extracted with ethyl acetate. The combined organic layer was washed with water, dried and concentrated. The crude material was purified using flash column purification in 10 % MeOH in CH2C12 to get 0.3 g of tert-butyl (S)-(6-(2-cyano-N,4-dimethylpent-2-enamido)-l -((4- methylbenzyl)amino)- 1 -oxohexan-2-yl)carbamate |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 150 mg | To a 250 ml three neck round bottomed flask under nitrogen atmosphere, 2-cyano-4- methylpent-2-enoic acid (55 mg, 0.39 mmol) was dissolved in DMF (1 ml) and cooled to 0 C. To the reaction mixture, HATU (223 mg, 0.58 mmol) was added and stirred at 0 C for 30 minutes. After 30 minutes, (S)-tert-butyl (3-(3-aminophenyl)-l-((4-methylbenzyl)amino)-l- oxopropan-2-yl)carbamate (150 mg, 0.39 mmol) dissolved in DMF (1 ml) was added dropwise followed by addition of DIPEA (0.2 ml, 1.17 mmol). The reaction mixture was stirred at rt for 1 h, poured into cold water and filtered under vacuum to give 150 mg of (S)-tert-butyl (3-(3-(2- cyano-4-methylpent-2-enamido)phenyl)-l -((4-methylbenzyl)amino)-l -oxopropan-2- yl)carbamate |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 170 mg | To a 35 ml vial, under nitrogen atmosphere, <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (0.126 g, 0.9 mmol) was dissolved in DMF (1.5 ml) and cooled to 0 C. To the reaction mixture, HATU (0.429 g, 1 .13 mmol) was added and stirred at 0 C for 30 minutes. After 30 minutes, (S)-tert- butyl (3-(3-(methylamino)phenyl)-l-((4-methylbenzyl)amino)-l-oxopropan-2-yl)carbamate (0.3 g, 0.75 mmol) dissolved in DMF (1.5 ml) was added dropwise followed by addition of DIPEA (0.52 ml, 3 mmol) and stirred at 0 C to rt for 16 h. The reaction mixture was diluted with water and extracted using ethyl acetate. The combined organic layer was dried over sodium sulfate and concentrated under vacuum and then purified by chromatography to yield 170 mg of (S)-tert- butyl (3-(3-(2-cyano-N,4-dimethylpent-2-enamido)phenyl)-l-((4-methylbenzyl)amino)-l- oxopropan-2-yl)carbamate |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 37 mg | To a 25 ml three neck round bottomed flask, under nitrogen atmosphere, 2-cyano-4- methylpent-2-enoic acid (57 mg, 0.41 mmol) was dissolved in DMF (2 ml) and cooled to 0 C. To the reaction mixture, HATU (234 mg, 0.62 mmol) was added and stirred at 0 C for 30 minutes. After 30 minutes, N-((2S,3R)-3-hydroxy-l -(((S)-l -((4-methylbenzyl)amino)-l -oxo-3- (piperidin-4-yl)propan-2-yl)amino)- l -oxobutan-2-yl)-5-methylisoxazole-3-carboxamide (200 mg, 0.41 mmol) was added dropwise followed by addition of DIPEA (0.2 ml, 1 .23 mmol) and stirring at rt for 1 h. The reaction mixture was poured onto cold water and the obtained solid was filtered under vacuum, washed with water and dried before purification by prep HPLC purification to yield 37 mg of the title compound. LC-MS (ES, m/z): 607 [M+FTJ. |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 35 mg | To a 10 ml vial, under nitrogen atmosphere, <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (59 mg, 0.42 mmol) was dissolved in DMF (1 ml) and cooled to 0 C. To the reaction mixture, HATU (161 mg, 0.42 mmol) was added and stirred at 0 C for 30 minutes. After 30 minutes, N-((2S,3R)- 1 -(((S)- 1 -((2-fluoro-4-methylbenzyl)amino)-3-(2-(methylamino)ethoxy)- 1 -oxopropan- 2-yl)amino)-3-hydroxy-l -oxobutan-2-yl)-5-methylisoxazole-3-carboxamide hydrochloride (150 mg, 0.28 mmol) dissolved in DMF (1 ml) was added dropwise followed by addition of DIPEA (0.14 ml, 0.85 mmol). The reaction mixture was stirred at 0 C to rt for 2 h. The reaction mixture was diluted with cold water and extracted with ethyl acetate. The combined organic layer was washed with brine, concentrated and purified using flash column purification to yield 35 mg of the title compound. LC-MS (ES, m/z): 615.3 [M+H]. |
[ 760-58-7 ]
[ 1456905-80-8 ]
| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 1 g | To a 50 ml single neck round bottomed flask under nitrogen atmosphere, 2-cyano-4- methylpent-2-enoic acid (0.95 g, 6.9 mmol) was dissolved in DMF (20 ml) and cooled to 0 C. HATU (3.26 g, 8.54 mmol) was added to the reaction mixture and stirred at 0 C for 30 minutes. Then, (S)-tert-butyl (6-amino-l-((4-methylbenzyl)amino)-l-oxohexan-2-yl)carbamate (2 g, 5.72 mmol) was added drop-wise followed by addition of DIPEA (2.95 ml, 3 mmol). The reaction mixture was stirred at 0 C for 1 h. Water was added to the reaction mixture and extracted with ethyl acetate, the collected organics were washed with water, saturated NaHC03 solution and dil. HC1 solution and the solvent removed. The crude material was purified by flash column purification in 30 % ethyl acetate in hexanes to get 1 g of (S)-tert-butyl (6-(2-cyano-4- methylpent-2-enamido)-l -((4-methylbenzyl)amino)-l -oxohexan-2-yl)carbamate |
[ 64-18-6 ]
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 10% | Into a 25-mL round-bottom flask, was placed a solution of 8-[2-(4-aminophenyl)ethyl]-6- (2,6-dichloro-3,5-dimethoxyphenyl)-2-[[4-(diethylamino)butyl]amino]-7H,8H-pyrido[2,3-d]- pyrimidin-7-one (300 mg, 0.49 mmol, 1.00 equiv) in N,N-dimethylformamide (7 mL). 2-Cyano- 4-methylpent-2-enoic acid (74.8 mg, 0.54 mmol, 1.10 equiv), HATU (278.9 mg, 0.73 mmol, 3.00 equiv), and TEA (148.4 mg, 1.47 mmol, 3.00 equiv) were added to the reaction mixture. The resulting solution was stirred overnight at room temperature, and then it was diluted with water. The resulting solution was extracted with DCM/MeOH(10: l) and the organic layers combined, and concentrated under vacuum. The crude product (300 mg) was purified by Prep- HPLC with the following conditions (2-AnalyseHPLC-SHIMADZU(HPLC-10)): Column, SunFire Prep CI 8 OBD Column, 5um, 19* 150mm,; mobile phase, water with 0.1% HCOOH and MeCN (22.0% MeCN up to 36.0% in 10 min, up to 100.0% in 2 min, down to 22.0% in 1 min); Detector, Waters2545 UvDector 254&220nm. This resulted in 37 mg (10%) of 2-cyano-N-(4-[2- [6-(2,6-dichloro-3,5-dimethoxyphenyl)-2-[[4-(diethylamino)butyl]amino]-7-oxo-7H,8H- pyrido[2,3-d]pyrimidin-8-yl]ethyl]phenyl)-4-methylpent-2-enamide; formic acid as a gray solid. LC-MS m/z: 736 [M+l-HCOOH]+. |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 200 mg | With (benzotriazo-1-yloxy)tris(dimethylamino)phosphonium hexafluorophosphate; In N,N-dimethyl-formamide; at 20℃; for 2h; | DIPEA (500 mg, 3.87 rnmol) was added to a stirred solution of N-((S)-2-phenyl-l- ((3aS,4S,6S,7aR)-3a,5,5-trimethylhexaliydro-4,6~metlianobenzo[d] | 1,3,2 jdioxaborol-2 -yl)emyl)-3-((R)- pyrrolidin-2-ylmethoxy)propanamide (800 mg, 1.76 mmol), <strong>[760-58-7]2-cyano-4-methylpent-2-enoic acid</strong> (245 mg, 1.76 mmol) and BOP (858 mg, 1 .94 mmol) in DMF (5 mL) at rt. After stirring at rt for 2 h, the reaction was quenched with water (20 mL) and diluted with EtOAc (40 mL), then washed with brine (2 x 5 mL), dried over Na2SC>4 and concentrated in vacuo. The crude residue was purified by Prep-HPLC to afford 3-(((R)- (0492) 1- (2-cyano-4-methylpent-2-enoyl)pyrrolidin-2-yl)methoxy)-N-((S)-2-phenyl-l-((3aS,4S,6S,7aR)-3a,5,5- trimethylhexahydro-4,6-methanobenzo[d][l ,3,2]dioxaborol-2-yl)ethyl)propanamide as a white solid (200 mg). |
[ 760-58-7 ]

| Yield | Reaction Conditions | Operation in experiment |
|---|---|---|
| 25 mg | With N-ethyl-N,N-diisopropylamine; HATU; In dichloromethane; at 20℃; for 1h; | Into a 25-mL round-bottom flask was placed a solution of (R)-piperidin-2-ylmethyl ((R)-2-pheny]-l-((3aS,4S,6S,7aR)-3a,5,5-trimethylhexahydro-4,6-methanobenzo[d][l,3^ (0509) yl)ethyl)carbarnate (105 mg, 0.24 mmol, 1.00 eq.) in dichloromethane (2 mL), followed by 2-cyano-4- methylpent-2-enoic acid (40 mg, 0.29 mmol, 1.20 eq.), HATU (136 mg, 0.36 mmol, 1.50 eq.), and DIEA (92.4 mg, 0.71 mmol, 3.00 eq.). The resulting solution was stirred for 1 h at rt. The reaction was then quenched by the addition of water (2 mL). The resulting solution was extracted with dichloromethane, and the organic layers combined and washed with brine. The mixture was dried over sodium sulfate and concentrated under vacuum. The resulting material was purified by Prep-HPLC with the following conditions (SHIMADZU): Column, XBridge Prep C18 OBD Column: mobile phase, Water (0.05%NH3H2O) and ACN (76% ACN up to 77% in 7 min); Detector, UV 254/220nm. his gave ((R)-l- (2-cyano-4-methylpent-2-enoyl)piperidin-2-yl)methy] ((R)-2-phenyl-l -((3aS,4S,6S,7aR)-3a,5,5- trimethylhexahydro-4,6-methanobenzo[d|[l ,3,2]dioxaborol-2-yl)ethyl)carbamate (25 mg) as a white solid |

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