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                                    Structure of (E)-2-Methyl-2-pentenoic acid
                                    
                                    
CAS No.: 16957-70-3
                                    
                                
 
                                 
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                            The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
 
                
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| CAS No. : | 16957-70-3 | 
| Formula : | C6H10O2 | 
| M.W : | 114.14 | 
| SMILES Code : | CC/C=C(C)/C(O)=O | 
| MDL No. : | MFCD00002655 | 
| InChI Key : | JJYWRQLLQAKNAD-SNAWJCMRSA-N | 
| Pubchem ID : | 5365909 | 
| GHS Pictogram: |   | 
| Signal Word: | Danger | 
| Hazard Statements: | H314 | 
| Precautionary Statements: | P260-P264-P280-P301+P330+P331-P303+P361+P353-P304+P340+P310-P305+P351+P338+P310-P363-P405-P501 | 
| Class: | 8 | 
| UN#: | 3261 | 
| Packing Group: | Ⅲ | 
| Num. heavy atoms | 8 | 
| Num. arom. heavy atoms | 0 | 
| Fraction Csp3 | 0.5 | 
| Num. rotatable bonds | 2 | 
| Num. H-bond acceptors | 2.0 | 
| Num. H-bond donors | 1.0 | 
| Molar Refractivity | 32.25 | 
| TPSA ? Topological Polar Surface Area: Calculated from  | 37.3 Ų | 
| Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from  | 1.48 | 
| Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by  | 1.42 | 
| Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from  | 1.43 | 
| Log Po/w (MLOGP)? MLOGP: Topological method implemented from  | 1.17 | 
| Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by  | 0.6 | 
| Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions | 1.22 | 
| Log S (ESOL):? ESOL: Topological method implemented from  | -1.31 | 
| Solubility | 5.59 mg/ml ; 0.0489 mol/l | 
| Class? Solubility class: Log S scale  | Very soluble | 
| Log S (Ali)? Ali: Topological method implemented from  | -1.81 | 
| Solubility | 1.78 mg/ml ; 0.0156 mol/l | 
| Class? Solubility class: Log S scale  | Very soluble | 
| Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by  | -0.47 | 
| Solubility | 39.0 mg/ml ; 0.342 mol/l | 
| Class? Solubility class: Log S scale  | Soluble | 
| GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg | High | 
| BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg | Yes | 
| P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set)  | No | 
| CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) | No | 
| CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) | No | 
| CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) | No | 
| CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) | No | 
| CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) | No | 
| Log Kp (skin permeation)? Skin permeation: QSPR model implemented from  | -5.99 cm/s | 
| Lipinski? Lipinski (Pfizer) filter: implemented from  | 0.0 | 
| Ghose? Ghose filter: implemented from  | None | 
| Veber? Veber (GSK) filter: implemented from  | 0.0 | 
| Egan? Egan (Pharmacia) filter: implemented from  | 0.0 | 
| Muegge? Muegge (Bayer) filter: implemented from  | 1.0 | 
| Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat  | 0.56 | 
| PAINS? Pan Assay Interference Structures: implemented from  | 0.0 alert | 
| Brenk? Structural Alert: implemented from  | 1.0 alert: heavy_metal | 
| Leadlikeness? Leadlikeness: implemented from  | No; 1 violation:MW<1.0 | 
| Synthetic accessibility? Synthetic accessibility score:  from 1 (very easy) to 10 (very difficult) | 1.86 | 
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 91% | sulfuric acid; for 16h;Heating / reflux; | 2-Methylpent-2-enoic acid methyl ester (16B). A mixture of <strong>[16957-70-3]2-methylpent-2-enoic acid</strong> (5.0 g, 44 mmol) and sulfuric acid (0.5 mL) in methanol (250 mL) was heated at reflux for 16 hours. The solution was allowed to cool down to 20 C and concentrated under reduced pressure. The residue was dissolved in ethyl acetate (100 mL) and washed with saturated aqueous sodium hydrogen carbonate (2 x 50 mL), distilled water (50 mL), then with brine (50 mL). The organic layer was dried over anhydrous MGS04, filtered and concentrated under reduced pressure to give the title compound (5.1 g, 91percent) as a colourless oil. | 
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| With oxalyl dichloride; In dichloromethane; N,N-dimethyl-formamide; at 0 - 20℃; for 2.25h; | General procedure: (a) To a solution of the 2-alkenoic acid (1 mmol) in dry dichloromethane (DCM, 3 mL), oxalyl chloride (COCl)2 (3.5 mmol, 0.3 mL) and two drops of DMF were added at 0 C. The mixture was allowed to stir for 15 min at 0 C and then for 2 h at rt, until no gas was observed. The solvent and the excess of oxalyl chloride were distilled off to dryness. The obtained acyl chloride was used in the next step without further purification.(b) The above obtained chloride was dissolved in dry DCM (5 mL) under argon and cooled at 0 C. Et3N (5 mmol) was added, followed by addition of TrNH2 or other RNH2 (1 mmol) in DCM (3 mL) at 0 C under stirring for 5 min. The resulting mixture was allowed to stir at rt until complete conversion, as indicated by TLC. The solvent was removed, the residue was redissolved in DCM, washed with water, an aqueous solution of 5% potassium hydrogen sulfate (KHSO4) and brine, dried over anhydrous Na2SO4, concentrated in vacuo and purified by column chromatography on silica gel (methanol/dichloromethane, 1:20). The products, N-trityl-3-alkenamides, are white solids, mixtures of geometrical isomers E and Z, except of N-trityl-3-butenamide, as revealed from their 1H NMR spectra. Yield: 80-90%. | |
| With thionyl chloride; at 20℃; for 20h; | Thionyl chloride (14.5 ml, 199 mmol) was added to 2-methyl (2E)-pentenoic acid (15.0 g, 131 mmol) and the mixture was stirred at room temperature for 20 h. Thionyl chloride was evaporated under reduced pressure, and the obtained residue was added dropwise to 28% aqueous NH3 below 0 C and stirred at the same temperature for 2 h. The reaction mixture was extracted with AcOEt. The organic layer was washed with saturated brine, dried over Na2SO4, and then evaporated under reduced pressure. The obtained residue was rinsed with n-hexane to give 6b (9.53 g, 64% yield) as a white solid. | |
| With oxalyl dichloride; N,N-dimethyl-formamide; In dichloromethane; for 2h;Inert atmosphere; Reflux; | [00110] One equivalent of oxalyl chloride (26.45 g, 208 mmol) was added to a 2 L reaction vessel containing one equivalent of (E)-<strong>[16957-70-3]2-methylpent-2-enoic acid</strong> (23.85 g, 208 mmol) in DCM (500 mL) under a flow of N2. While stirring, five drops of dry DMF were pipetted into the mixture creating effervescence. The reaction was left in a state a reflux for 2 hours. An aliquot was taken after 90 minutes showing that the reaction had gone to completion.tool ii] ?H NMR (COG3): 5 1.08 (t, 3H, J = 7.6 Hz, Meb), 5 1.88 (q, 3H, J = 1.0 Hz, Me3), 5 2.26 (quinq, 2H, J = 7.5, 0,9 Hz, Cl-I2), 5 6.87 (tq, I H, J = 7.4 Hz, 1.3 Hz, vinylic-H)[00112] 13C{?H} NMR (CDGI3): 5 12.57 (Meb), 5 13.23 (Me3), 5 22.93 (CH2), 5 154.23 (Vinylic-H) | 
| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 89% | In methanol; | EXAMPLE 2 Asymmetric hydrogenation of <strong>[16957-70-3]trans-2-methyl-2-pentenoic acid</strong> In an atmosphere of argon, 14.3 mg (16.8*10-3 mmol) of Ru(OAc)2 [(S)-(-)-OcH-binap] complex and 409 mg (3.58 mmol) of <strong>[16957-70-3]trans-2-methyl-2-pentenoic acid</strong> were dissolved in 18 ml of methanol, and the resulting solution was put into a 100 ml capacity autoclave and stirred at 25° C. for 24 hours under a hydrogen pressure of 1.5 atm. The reaction solution was concentrated under a reduced pressure and then subjected to distillation under a reduced pressure to obtain 370 mg of (S)-2-methylpentanoic acid with a yield of 89percent. | 
 [ 16957-70-3 ]
                                                    
                                                    [ 16957-70-3 ]
 [ 78-76-2 ]
                                                    
                                                    [ 78-76-2 ]
 [ 55894-37-6 ]
                                                    
                                                    [ 55894-37-6 ]

 [ 16957-70-3 ]
                                                    
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 [ 585-71-7 ]
                                                    
                                                    [ 585-71-7 ]

 [ 16957-70-3 ]
                                                    
                                                    [ 16957-70-3 ]
 [ 1521-51-3 ]
                                                    
                                                    [ 1521-51-3 ]
 [ 55894-37-6 ]
                                                    
                                                    [ 55894-37-6 ]

| Yield | Reaction Conditions | Operation in experiment | 
|---|---|---|
| 2-(4-hydroxy-4-methylpentyl)norbornadiene produced according to Example I of U.S. Pat. No. 3,911,028beta-Damascone (1-crotonyl-2,6,6-trimethylcyclohex-1-ene);beta-Damascenone (1-crotonyl-2,6,6-trimethylcyclohexa-1,3-diene);Beta-cyclohomocitral (2,6,6-trimethylcyclohex-1-ene carboxaldehyde)Isoamyl butyrate;2-Methyl-2-pentenoic acid;Elemecine (4-allyl-1,2,6-trimethoxybenzene);Isoelemecine (4-propenyl-1,2,6-trimethoxybenzene);Cis-2-3-methyl pentenoic acid;Ethyl-2-methyl-3-pentenoate; andIsobutyl-cis-2-methyl-3-pentenoate | 
 [ 16957-70-3 ]
                                                    
                                                    [ 16957-70-3 ]
 [ 715-11-7 ]
                                                    
                                                    [ 715-11-7 ]

 [ 16957-70-3 ]
                                                    
                                                    [ 16957-70-3 ]
 [ 6749-54-8 ]
                                                    
                                                    [ 6749-54-8 ]


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