Structure of 872-82-2
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CAS No. : | 872-82-2 |
Formula : | C5H8N2O |
M.W : | 112.13 |
SMILES Code : | C1=C(CCO)[NH]C=N1 |
MDL No. : | MFCD00195671 |
InChI Key : | HEEACTTWORLLPM-UHFFFAOYSA-N |
Pubchem ID : | 3083655 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 8 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.4 |
Num. rotatable bonds | 2 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 2.0 |
Molar Refractivity | 29.52 |
TPSA ? Topological Polar Surface Area: Calculated from |
48.91 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.52 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
-0.33 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
-0.06 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
-0.94 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.1 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
0.06 |
Log S (ESOL):? ESOL: Topological method implemented from |
-0.66 |
Solubility | 24.7 mg/ml ; 0.22 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (Ali)? Ali: Topological method implemented from |
-0.24 |
Solubility | 65.1 mg/ml ; 0.581 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.41 |
Solubility | 4.36 mg/ml ; 0.0389 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
No |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-7.22 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.62 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With hydrogenchloride; sodium nitrite; In water; at 40℃; for 2h; | Dissolve 2 g of histamine hydrochloride in 12 mL of 2 mol/L hydrochloric acid.Stir yellow green solutionWarm up to 40 C.An aqueous solution containing 2.0 g of sodium nitrite was slowly added to the above reaction solution. After the addition, the reaction was continued for 2 h.The solvent was distilled off to give a yellow oily liquid, a small amount of ethanol was added, and the white solid sodium chloride was filtered.The filtrate was spin-dried as crude 4-hydroxyethyl imidazole and used directly in the next reaction. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Examples of the imidazole compounds will be given below, which by no means limit them: ... 2-methylimidazole 4-methylimidazole 4-(2-hydroxyethyl)-imidazole 2-ethylimidazole ... |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
28% | With triethylamine; In N,N-dimethyl acetamide; at 120℃; for 15h; | To a solution of the compound in Example 139 (309 mg, 999 mumol) in N,N-dimethylacetamide (10 ml) were added <strong>[872-82-2]4-(2-hydroxyethyl)imidazole</strong> (270 mg, 2.41 mmol) and triethylamine (1 ml) in sequence, and the mixture was stirred for 15 hours at 120 C. The reaction mixture was concentrated under reduced pressure and purified by means of silica gel column chromatography [methylene chloride?methylene chloride-methanol (10:1)] to obtain 114 mg of the title compound as yellowish brown powder. Yield 28%. 1H-NMR(CDCl3,delta):1.47(3H,t,J=6.8 Hz),1.53(3H,t,J=7.3 Hz), 2,81(1H,d,J=4,4 Hz),2.87-2.92(2H,m),3.97(2H,t,J=5.9 Hz), 4.55(2H,q,J=6.8 Hz),4.66(2H,q,J=7.3 Hz),6.94(1H,d,J=1.0 Hz), 7.66(1H,d,J=1.0 Hz),8.15(1H,s),8.42(1H,s). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In aqueous HBr; | EXAMPLE 108 2-[2-(1H-Imidazol-4-yl)ethyl]thio}pyridine 0.5 g (4.4 mmol) of 4-(2-hydroxyethyl)-1H-imidazole and 0.49 g (44.4 mmol) of 2-mercaptopyridine are brought to reflux in 5 ml of 47% aqueous HBr for 24 h. The solvent is removed azeotropically with isopropanol under reduced pressure to provide the title compound in the form of a dihydrobromide monohydrate salt which, after crystallization from isopropanol, melts at 189-190 C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With triethylamine; In tetrahydrofuran; dichloromethane; for 0.333333h; | 4-lmidazoleacetic acid hydrochloride (5.93 g, 36.47 mmol) in methanol (125 mL) was saturated with HCI gas and stirred at room temperature for 5.5 h, then concentrated to give a quantitative yield of 4-imidazoleacetic acid methyl ester hydrochloride as a white solid which had NMR (MeOH- d4) delta 8.87 (d, J = 1.2 Hz, 1H), 7.46 (s, 1 H), 3.89 (s, 2H) 3.72 <s, 3H). This was added portion-wise to a slurry of lithium aluminum hydride (2.8 g, 74.0 mmol) in THF (150 mL). The mixture, was refluxed for 3h, cooled in ice and carefully quenched with excess sodium sulfate decahydrate. This slurry was dried with anhydrous sodium sulfate and filtered through Celite with ethyl acetate rinse. Concentration gave 2.6 g of a colorless oil that NMR (CDCI3) showed to be a 1.5:1 mixture of starting ester and 2-(1 H-imidazol-4-yl)-ethanol. This crude mixture was slurried in methylene chloride (30 mL) and triethylamine (3.3 mL, 23.6 mmoL) and p-toluenesulfonylchloride (4.45 g, 23.3 mmol) was added. THF (30 mL) was added to help dissolve the starting material. A vigorous reaction ensued. After stirring 20 min, the reaction was concentrated, the residue was partitioned between ethyl acetate and water. The organics were washed with sat. NaHCO3 solution and brine, dried (MgSO4) and concentrated to an oily' white solid. Ether (50 mL) was added and the mixture was stirred vigorously for 30 min. to break up the solid. This material was filtered off and rinsed with ether to give 2.96g (30% from 4-imidazoleacetic acid hydrochloride) of pure 2-[1 -(toluene-4- sulfonyl)-1 H-imidazol-4-yl]-ethanol as a white solid which had: NMR (CDCI3) delta 7.93 (d, J = 1.2Hz, 1H), 7.79 (d, J = 8.3 Hz, 2H), 7.33 (d, J= 8.3 Hz, 2H), 7.05 (d, J = 1.2 Hz, 1 H), 3.83 (t, J = 5.8 Hz, 2H), 2.74-2.71 (m, 2H), 2.42 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With lithium aluminium tetrahydride; In tetrahydrofuran; for 3h;Heating / reflux; | 4-lmidazoleacetic acid hydrochloride (5.93 g, 36.47 mmol) in methanol (125 mL) was saturated with HCI gas and stirred at room temperature for 5.5 h, then concentrated to give a quantitative yield of 4-imidazoleacetic acid methyl ester hydrochloride as a white solid which had NMR (MeOH- d4) delta 8.87 (d, J = 1.2 Hz, 1H), 7.46 (s, 1 H), 3.89 (s, 2H) 3.72 <s, 3H). This was added portion-wise to a slurry of lithium aluminum hydride (2.8 g, 74.0 mmol) in THF (150 mL). The mixture, was refluxed for 3h, cooled in ice and carefully quenched with excess sodium sulfate decahydrate. This slurry was dried with anhydrous sodium sulfate and filtered through Celite with ethyl acetate rinse. Concentration gave 2.6 g of a colorless oil that NMR (CDCI3) showed to be a 1.5:1 mixture of starting ester and 2-(1 H-imidazol-4-yl)-ethanol. This crude mixture was slurried in methylene chloride (30 mL) and triethylamine (3.3 mL, 23.6 mmoL) and p-toluenesulfonylchloride (4.45 g, 23.3 mmol) was added. THF (30 mL) was added to help dissolve the starting material. A vigorous reaction ensued. After stirring 20 min, the reaction was concentrated, the residue was partitioned between ethyl acetate and water. The organics were washed with sat. NaHCO3 solution and brine, dried (MgSO4) and concentrated to an oily' white solid. Ether (50 mL) was added and the mixture was stirred vigorously for 30 min. to break up the solid. This material was filtered off and rinsed with ether to give 2.96g (30% from 4-imidazoleacetic acid hydrochloride) of pure 2-[1 -(toluene-4- sulfonyl)-1 H-imidazol-4-yl]-ethanol as a white solid which had: NMR (CDCI3) delta 7.93 (d, J = 1.2Hz, 1H), 7.79 (d, J = 8.3 Hz, 2H), 7.33 (d, J= 8.3 Hz, 2H), 7.05 (d, J = 1.2 Hz, 1 H), 3.83 (t, J = 5.8 Hz, 2H), 2.74-2.71 (m, 2H), 2.42 (s, 3H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1.6 g | With 1H-imidazole; In N,N-dimethyl-formamide; at 20℃; for 2h; | Preparation 32 4-(2-((tert-butyldiphenylsilyl)oxy)ethyl)-1H-imidazole A solution of <strong>[872-82-2]2-(1H-imidazol-4-yl)ethanol</strong> (1.24 g, 11.1 mmol) in DMF (10 mL) was treated with imidazole (1.51 g, 22.1 mmol) and TBDPSCl (3.12 mL, 12.2 mmol) and the mixture was stirred at RT for 2 h. The mixture was then poured onto H2O and extracted with AcOEt. The combined org. layers were dried over Na2SO4, filtered and concentrated in vacuo. Purification by flash chromatography (SiO2, AcOEt/heptane 0:100 to 100:0) gave the title compound (1.6 g). UPLC-MS: MS 351.2 (M+H+); UPLC rt 1.02 min. |
1.6 g | With 1H-imidazole; at 20℃; for 2h; | A solution of 2-(1 H-imidazoM-yl)ethanol (1.24 g, 11.1 mmol) in DMF (10 mL) was treated with imidazole (1.51 g, 22.1 mmol) and TBDPSCI (3.12 mL, 12.2 mmol) and the mixture was stirred at RT for 2h. The mixture was then poured onto H20 and extracted with AcOEt. The combined org. layers were dried over Na2S04, filtered and concentrated in vacuo. Purification by flash chromatography (Si02, AcOEt heptane 0:100 to 100:0) gave the title compound (1.6 g). UPLC-MS: MS 351.2 (M+H+); UPLC rt 1.02 min. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With trans-N,N'-dimethyl-1,2-cyclohexyldiamine; potassium phosphate; copper(l) iodide; In dimethyl sulfoxide; at 20 - 50℃; for 2h;Inert atmosphere; | To a suspension of tert-butyl 2-chloro-4-iodobenzoate (0.44 mmol, 150 mg), copper(I) iodide (0.44 mmol, 84 mg), 2-(lH-imidazol-4-yl)ethanol (0.44 mmol, 50 mg) and tripotassium phosphate (1.33 mmol, 282 mg) in DMSO (2 mL) was added (0936) trans-N,N'-dimethylcyclohexane-l,2-diamine (0.89 mmol, 126 mg) at RT and it was degassed under nitrogen atmosphere. The mixture was stirred at 50 C for 2 h. The reaction mixture was quenched with water and extracted with EtOAc, washed with water (2 times), and concentrated in vacuo. Purification by column chromatography on silica gel (5% MeOH in EtOAc) gave the title compound. (0937) 1H NMR (300 MHz, CDC13) delta (ppm): 7.88 (1H, d, J= 8.2 Hz), 7.83 (1H, d, J= 1.4 Hz), 7.46 (1H, d, J= 2.4 Hz), 7.31 (1H, dd, J= 8.4, 2.2 Hz), 7.12 (1H, t, J= 0.7 Hz), 3.95 (2H, t, J= 5.7 Hz), 2.87 (2H, t, J= 5.3 Hz), 1.63 (9H, d, J= 2.7 Hz) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40% | With triethylamine; In N,N-dimethyl-formamide; at 20℃; for 12h; | Triphenylmethyl chloride (29.84 g, 107.0 mmol, 1.2 eq) is added at room temperature to a stirred solution of <strong>[872-82-2]2-(1H-imidazol-4-yl)ethanol</strong> (10.0 g, 89.18 mmol, 1.0 eq) [872-82-2] in N,N-dimethylformamide (300 mL), followed by triethylamine (14.92 mL, 107.0 mmol, 1.2 eq). After 12 hours stirring at room temperature, the reaction mixture is poured into crushed ice and the resulting solid is collected by filtration, washed with water and acetone to afford 2-(1-tritylimidazol-4-yl)ethanol as a white solid (12.5 g, 40% yield). 1H-NMR (400 MHz, DMSO-d6) ^ ppm: 7.38 (m, 9H), 7.24 (s, 1H), 7.08 (m, 6H), 6.65 (s, 1H), 4.52 (t, J = 5.6 Hz, 1H), 3.57 (m, 2H), 2.58 (t, J = 7.2 Hz, 2H). MS m/z (+ESI): 355.2 [M+H]+ |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
58% | With caesium carbonate; In N,N-dimethyl-formamide; at 140℃; for 12h; | A solution of 1.12 g (10 mmol) of 2- (1 H-imidazol-4-yl) ethan-1-ol was dissolved in 20 ml of DMF, 1.30 g of (lOmmol) of 4-amino-6-chloroetine, g (12 mmol) of cesium carbonate, the temperature was raised to 140 C and the reaction was stirred for 12 h. And the residue was purified by silica gel column chromatography. The eluent was methanol: dichloromethane = 1: 30 to give 1.19 g of the compound as shown on the white solid (yield of the compound of the formula IIb-1) in a yield of 58%. |
58% | With caesium carbonate; In N,N-dimethyl-formamide; at 140℃; for 12h; | General procedure: A mixture of imidazole derivatives (4a-c, 10mmol), 4-amino-6-chloropyrimidine (1.30g, 10mmol), and K2CO3 (2.07g, 15mmol, for 5a) or Cs2CO3 (3.91g, 12mmol, for 5b-c) was stirred in DMF (20mL) at 100C (for 5a) or at 140C (for 5b-c) for 12h. Water (100mL) was then added. The mixture was extracted with EtOAc (3×50mL). The organic layer was separated and dried over Na2SO4. Removal of the solvents produced a residue which was purified using column chromatography and eluted with a mixture of MeOH:CH2Cl2 (1:30, v:v) to afford 5a-c. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1.3 g | With thionyl chloride; at 70℃; for 1h;Cooling with ice; | In an ice bath, add slowly to the 4-hydroxyethyl imidazole obtained in Step 1.3 mL of thionyl chloride.After the addition was complete, the mixture was warmed to room temperature and stirred to give a yellow solution.Raise the temperature to 70 C for 1 h.The brown clear solution was removed by rotary evaporation to remove the remaining thionyl chloride to give a brown viscous liquid.Add a small amount of water to dissolve,The pH was adjusted to basic with aqueous sodium carbonate solution and extracted three times with ethyl acetate.The combined organic phases are dried over anhydrous sodium sulfate.Concentrated yellow oily liquid.The crude product is separated by column chromatography.Concentrated 1.3 g of a yellow oily solution was used directly for the next reaction. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In methanol; for 1h;Reflux; | General procedure: 0.291 g (1 mmol) of cobalt(II) nitrate hexahydrate was dissolvedin 5 mL of methanol. In a separate flask 0.224 g (2 mmol) 4(5)-(bhydroxyethyl)imidazole was dissolved in 5 mL of methanol. Bothsolutions were mixed and refluxed for 60 min. The resulting solutionwas left to evaporate in room temperature. After severalmonths reddish crystals of 1 were formed in the initially obtainedpink oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In methanol; for 1h;Reflux; | General procedure: 0.291 g (1 mmol) of cobalt(II) nitrate hexahydrate was dissolvedin 5 mL of methanol. In a separate flask 0.224 g (2 mmol) 4(5)-(bhydroxyethyl)imidazole was dissolved in 5 mL of methanol. Bothsolutions were mixed and refluxed for 60 min. The resulting solutionwas left to evaporate in room temperature. After severalmonths reddish crystals of 1 were formed in the initially obtainedpink oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In methanol; for 1h; | 0.283 g (1 mmol) of zinc acetylacetonate was dissolved in 20 mLof methanol. In a separate flask 0.224 g (2 mmol) of 4(5)-(bhydroxyethyl)imidazole was dissolved in 5 mL of methanol. Bothsolutions were mixed and stirred for 60 min. The resulting suspensionwas filtered, the filtrate was concentrated to a small volumeand left to evaporate. After 3 years a small amount of colorlesscrystals was formed in the yellow oil. The compound was characterizedonly by X-ray diffraction. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
In methanol; for 1h;Reflux; | 0.291 g (1 mmol) of cobalt(II) nitrate hexahydrate was dissolvedin 5 mL of methanol. In a separate flask 0.224 g (2 mmol) 4(5)-(bhydroxyethyl)imidazole was dissolved in 5 mL of methanol. Bothsolutions were mixed and refluxed for 60 min. The resulting solutionwas left to evaporate in room temperature. After severalmonths reddish crystals of 1 were formed in the initially obtainedpink oil. Anal. calcd. for CoC10H20N6O10 (442.03 g/mol): C 27.10; H4.55; N 18.96, found: C 27.11; H 4.26; N 19.78. M.p. 355 K. FT-IR(solid): t = 3224 (vs), 2929 (s), 1655 (w), 1591 (w), 1575 (w),1501 (w), 1474 (w), 1331 (vs), 1269 (s), 1188 (m), 1105 (m),1090 (w), 1064 (w), 1044 (w), 1022 (s), 964 (w), 946 (w), 857(w), 821 (m), 771 (w), 657 (w), 637 (w), 621 (m), 501 (w) cm1.Vis spectra of aqueous solutions are presented in Supplementarycontent (Fig. 1S). |