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Selective and Cell-Active PBRM1 Bromodomain Inhibitors Discovered through NMR Fragment Screening
Shifali Shishodia ; Raymundo Nuñez ; Brayden P. Strohmier , et al. J. Med. Chem.,2022,65(20):13714-13735. DOI: 10.1021/acs.jmedchem.2c00864 PubMed ID: 36227159
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Abstract: PBRM1 is a subunit of the PBAF chromatin remodeling complex that uniquely contains six bromodomains. PBRM1 can operate as a tumor suppressor or tumor promoter. PBRM1 is a tumor promoter in prostate cancer, contributing to migratory and immunosuppressive phenotypes. Selective chemical probes targeting PBRM1 bromodomains are desired to elucidate the association between aberrant PBRM1 chromatin binding and cancer pathogenesis and the contributions of PBRM1 to immunotherapy. Previous PBRM1 inhibitors unselectively bind SMARCA2 and SMARCA4 bromodomains with nanomolar potency. We used our protein-detected NMR screening pipeline to screen 1968 fragments against the second PBRM1 bromodomain, identifying 17 hits with Kd values from 45 μM to >2 mM. Structure–activity relationship studies on the tightest-binding hit resulted in nanomolar inhibitors with selectivity for PBRM1 over SMARCA2 and SMARCA4. These chemical probes inhibit the association of full-length PBRM1 to acetylated histone peptides and selectively inhibit growth of a PBRM1-dependent prostate cancer cell line.
Purchased from AmBeed: 77326-36-4 ; 104-87-0 ; 2148-56-3 ; 63329-53-3 ; 1591-37-3 ; 387-45-1 ; 936-08-3 ; 1123-56-4 ; 2819989-75-6 ; 703-80-0 ; 1885-29-6 ; 115643-59-9 ; 15764-16-6 ; 487-68-3 ; 145737-61-7 ; 5779-95-3 ; 88-68-6 ; 6575-11-7 ; 77326-62-6 ; 88-65-3 ; 4635-59-0 ; 5779-94-2 ; 56043-01-7 ; 5779-93-1 ; 1591-38-4 ; 446-52-6 ; 62803-47-8 ; 1885-31-0 ; 620-23-5 ; 54166-95-9 ; 22179-72-2 ; 529-20-4 ; 100-52-7 ; 123-11-5 ; 1711-06-4 ; 454-89-7 ; 170875-01-1 ; 883032-29-9 ; 2819989-61-0 ; 1915012-21-3 ; 2819989-58-5 ; 2819989-60-9 ; 2819989-57-4 ; 2819989-68-7 ; 2819989-67-6 ; 111478-13-8 ; 73096-42-1 ; 2835-78-1 ; 118-92-3 ; 22458-07-7 ; 80258-99-7 ; 24782-64-7 ; 1108790-90-4 ; 175204-03-2 ; 97-96-1 ; 780802-33-7 ; 89-98-5 ...More
CAS No. : | 1591-38-4 | MDL No. : | MFCD18389707 |
Formula : | C8H10N2O2 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | AQAHTARDEJNYPN-UHFFFAOYSA-N |
M.W : | 166.18 | Pubchem ID : | 12264814 |
Synonyms : |
|
Num. heavy atoms : | 12 |
Num. arom. heavy atoms : | 6 |
Fraction Csp3 : | 0.12 |
Num. rotatable bonds : | 2 |
Num. H-bond acceptors : | 2.0 |
Num. H-bond donors : | 2.0 |
Molar Refractivity : | 45.43 |
TPSA : | 78.34 Ų |
GI absorption : | High |
BBB permeant : | No |
P-gp substrate : | No |
CYP1A2 inhibitor : | No |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | No |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -7.43 cm/s |
Log Po/w (iLOGP) : | 1.23 |
Log Po/w (XLOGP3) : | -0.17 |
Log Po/w (WLOGP) : | 0.38 |
Log Po/w (MLOGP) : | 0.33 |
Log Po/w (SILICOS-IT) : | 0.26 |
Consensus Log Po/w : | 0.41 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 1.0 |
Bioavailability Score : | 0.55 |
Log S (ESOL) : | -1.0 |
Solubility : | 16.6 mg/ml ; 0.0997 mol/l |
Class : | Very soluble |
Log S (Ali) : | -1.02 |
Solubility : | 15.9 mg/ml ; 0.0955 mol/l |
Class : | Very soluble |
Log S (SILICOS-IT) : | -1.75 |
Solubility : | 2.97 mg/ml ; 0.0179 mol/l |
Class : | Soluble |
PAINS : | 0.0 alert |
Brenk : | 1.0 alert |
Leadlikeness : | 1.0 |
Synthetic accessibility : | 1.25 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P264-P280-P302+P352-P305+P351+P338-P332+P313-P337+P313-P362 | UN#: | N/A |
Hazard Statements: | H315-H319 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
40% | With water; hydrazine hydrate; In ethanol; at 45℃; for 4h;Reflux; | Step 2 To a suspension of 2-methoxy-6-nitrobenzonitrile (2.60 g, 14.6 mmol) in ethanol (60 mL) was added hydrazine monohydrate (1.53 g, 30.7 mmol). While heating the mixture to 45 C., Raney Ni (600 mg) was added in several portions, and the mixture was stirred at 60 C. for 2 hrs. Raney Ni (300 mg) was added again, and the mixture was heated under reflux for 2 hrs. After allowing to cool to room temperature, insoluble material was filtered off, and the filtrate was concentrated under reduced pressure. Ethyl acetate was added to the obtained concentrated residue, and the mixture was extracted with 1N hydrochloric acid. The aqueous layer was basified with 1N aqueous sodium hydroxide solution and the mixture was extracted with ethyl acetate. The organic layer was washed with water and saturated brine, dried over sodium sulfate and concentrated under reduced pressure to give 2-amino-6-methoxybenzamide as a brown powder (980 mg, 40%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | With water; potassium carbonate; In water; at 150℃; for 0.5h;Microwave irradiation; | General procedure: Adapted from a literature procedure,1 the appropriate organonitrile (1.0 eq.) and K2CO3(0.2eq.)wereaddedtoamicrowavetubewithastir-barwithdeionizedwater(8.5mLpermmolsubstrate).Afterirradiationundermicrowaveat150Cfor30minutes,thereactionmixturewascooled,extractedwithEtOAc(320mL),thecombinedphasesdriedoverMgSO4andexcesssolventremovedinvacuo.TheresiduewaspurifiedbyFCC,ifrequired,togivethetitlecompound. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
EXAMPLE 40 2'-Carbamoyl-3'-methoxyoxanilic acid methyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 3, giving 4.24 g of the title compound, m.p. 195-198 C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.38; H, 4.80; N, 11.11. Found: C, 52.30; H, 4.94; H, 11.40. | ||
EXAMPLE 23 2'-Carbamoyl-3'-methoxyoxanilic acid methyl ester. 96 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 12, giving 4.24 g. of the title compound, m.p. 195-198 C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.28; H, 4.80; N, 11.11. Found: C, 52.30; H, 4.94; H, 11.40. | ||
EXAMPLE 23 2'-Carbamoyl-3'-methoxyoxanilic acid methyl ester. 96 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 12, giving 4.24 g. of the title compound, m.p. 195-198 C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.28; H, 4.80; N, 11.11: Found: C, 52.30; H, 4.94; H, 11.40. |
EXAMPLE 23 2'-Carbamyl-3'-methoxyoxanilic acid methyl ester. 96. 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 12, giving 4.24 g. of the title compound, m.p. 195-198 C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.28; H, 4.80; N, 11.11. Found: C, 52.30; H, 4.94; H, 11.40. | ||
EXAMPLE 40 2'-Carbamoyl-3'-methoxyoxanilic acid methyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 3, giving 4.24 g of the title compound, m.p. 195-198 C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.38; H, 4.80; N, 11.11. Found: C, 52.30; H, 4.94; H, 11.40. | ||
EXAMPLE 40 2'-Carbamoyl-3'-methoxyoxanilic acid methyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 3.04 ml. (0.033 mole) of methyl oxalyl chloride in a manner similar to example 3, giving 4.24 g of the title compound, m.p. 195-198C., after crystallization from methanol. Elemental Analysis for C11 H12 N2 O5: Calc'd: C, 52.38; H, 4.80; N, 11.11. Found: C, 52.30; H, 4.94; H, 11.40. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With triethylamine; In tetrahydrofuran; at 35℃; for 2h;Cooling with ice; | Step 3 (1550) To a solution of <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (960 mg, 5.78 mmol) and triethylamine (701 mg, 6.93 mol) in THF (20 mL) was added dropwise ethyl chloroglyoxylate (868 mg, 6.36 mmol) under ice-cooling, and the mixture was stirred at room temperature for 2 hrs. The reaction mixture was diluted with ethyl acetate, the mixture was washed with water and saturated brine, dried over sodium sulfate and concentrated under reduced pressure. The obtained concentrated residue was washed with ethanol, ethyl ((2-(aminocarbonyl)-3-methoxyphenyl)amino)(oxo)acetate to give a yellow powder (1.56 g, 100%). |
EXAMPLE 34 2'-Carbamoyl-3'-methoxyoxanilic acid ethyl ester. 100/94 6-Amino-o-anisamide (8.75 g, 0.0527 mole) is condensed with 6.2 ml (0.0554 mole) of ethyl oxalyl chloride in a manner similar to example 3, giving 8.35 g of the title compound, m.p. 170-173 C., after crystallization from ethanol. Elemental Analysis for C12 H14 N2 O5: Calc'd: C, 54.13; H, 5.30; N, 10.52. Found: C, 54.36; H, 5.20; N, 10.66. | ||
EXAMPLE 18 2'-Carbamoyl-3'-methoxyoxanilic acid ethyl ester. 100/94. 6-Amino-o-anisamide (8.75 g., 0.0527 mole) is condensed with 6.2 ml. (0.0554 mole) of ethyl oxalyl chloride in a manner similar to example 12, giving 8.35 g. of the title compound, m.p. 170-173 C., after crystallization from ethanol. Elemental Analysis for C12 H14 N2 O5: Calc'd: C, 54.13; H, 5.30; N, 10.52. Found: C, 54.36; H, 5.20; N, 10.66. |
EXAMPLE 18 2'-Carbamoyl-3'-methoxyoxanilic acid ethyl ester. 100/94 6-Amino-o-anisamide (8.75 g., 0.0527 mole) is condensed with 6.2 ml. (0.0554 mole) of ethyl oxalyl chloride in a manner similar to example 12, giving 8.35 g. of the title compound, m.p. 170-173 C., after crystallization from ethanol. Elemental Analysis for C12 H14 N2 O5: Calc'd: C, 54.13; H, 5.30; N, 10.52: Found: C, 54.36; H, 5.20; N, 10.66. | ||
EXAMPLE 18 2'-Carbamyl-3'-methoxyoxanilic acid ethyl ester. 100/94. 6-Amino-o-anisamide (8.75 g., 0.0527 mole) is condensed with 6.2 ml. (0.0554 mole) of ethyl oxalyl chloride in a manner similar to example 12, giving 8.35 g. of the title compound, m.p. 170-173 C., after crystallization from ethanol. Elemental Analysis for C12 H14 N2 O5: Calc'd: C, 54.13; H, 5.30; N, 10.52. Found: C, 54.36; H, 5.20; N, 10.66. | ||
EXAMPLE 34 2'-Carbamoyl-3'-methoxyoxanilic acid ethyl ester. 100/94 6-Amino-o-anisamide (8.75 g, 0.0527 mole) is condensed with 6.2 ml (0.0554 mole) of ethyl oxalyl chloride in a manner similar to example 3, giving 8.35 g of the title compound, m.p. 170-173C., after crystallization from ethanol. Elemental Analysis for C12 H14 N2 O5: Calc'd: C, 54.13; H, 5.30; N, 10.52. Found: C, 54.36; H, 5.20; N, 10.66. | ||
In pyridine; dichloromethane; | EXAMPLE 1 [2-(aminocarbonyl)-3-methoxyphenylamino]oxoacetic acid ethyl ester 6-Amino-o-anisamide(8.75 g.) is condensed with 6.2 ml. of ethyl oxalyl chloride in 100 ml. methylene chloride in the presence of 9.6 ml. of pyridine at 10 C. Aqueous work-up and evaporation of the methylene chloride followed by recrystallization from ethanol gives the title compound, m.p. 170-173 C. Anal. Calcd. for C12 H14 N2 O5: C, 54.13; H, 5.30; N, 10.52. Found: C, 54.36; H, 5.20; N, 10.66. Potency: 12.5 mg/kg. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With pyridine; In dichloromethane; | EXAMPLE 12 Preparation of 2-(acetoxyacetylamino)-6-methoxybenzamide: To a solution of <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (1.7 g) in methylene chloride (20 ml) is added pyridine (1.6 ml), and thereto is added dropwise acetoxyacetyl chloride (1.1 ml) which is cooled in an ice bath. The mixture is stirred at room temperature for 2 hours, and thereafter, the solvent is distilled off under reduced pressure. The resulting crude crystals are washed with water and then are recrystallized from ethanol to give the title compound (2.1 g) having the following physical properties. Melting point: 163 -165 C. IR (KBr) υ: 3465, 3195, 1750, 1695, 1650, 1605, 1520, 1470, 1440, 1395, 1235, 1095, 1080, 925, 815, 785, 540 cm-1. NMR (DMSO-d6) δ: 11.45 (1 H, brs), 8.05-6.84 (3 H, m), 7.91 (2 H, brs), 4.60 (2 H, s), 3.82 (3 H, s), 2.20 (3 H, s) |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With NaH; In N-methyl-acetamide; | EXAMPLE 49 3'-Methoxy-2'-N-Methylcarbamyloxanilic acid ethyl ester. 72 Slow addition of 4.98 g. (0.03 mole) of 6-amino-o-anisamide to a mixture of 57% NaH (1.32 g., 0.0315 mole) in 50 ml. dimethylformamide was carried out at room temperature. After the evolution of H2 ceased, the mixture was cooled to 3 C. and 2.06 ml. (0.033 mole) of methyliodide was slowly added at 3-5 C. The temperature was allowed to go up to room temperature and stir for 2 hours. The mixture was concentrated, the residue extracted into ethyl acetate-water, the mixture was basified, and the ethyl acetate layer was washed with water, brine and dried. Concentration gave a tan solid that was crystallized (ethanol), giving 0.45 g. (8%) of 6-amino-N-methyl-o-anisamide m.p. 186-189 C. | |
With NaH; In N-methyl-acetamide; | EXAMPLE 49 3'-Methoxy-2'-methylcarbamoyloxanilic acid ethyl ester. 72 Slow addition of 4.98 g. (0.03 mole) of 6-amino-o-anisamide to a mixture of 57% NaH (1.32 g., 0.0315 mole) in 50 ml. dimethylformamide was carried out at room temperature. After the evolution of H2 ceased, the mixture was cooled to 3 C. and 2.06 ml. (0.033 mole) of methyliodide was slowly added at 3-5 C. The temperature was allowed to go up to room temperature and stir for 2 hours. The mixture was concentrated, the residue extracted into ethyl acetate-water, the mixture was basified, and the ethyl acetate layer was washed with water, brine and dried. Concentration gave a tan solid that was crystallized (ethanol), giving 0.45 g. (8%) Of 6-amino-N-methyl-o-anisamide m.p. 186-189 C. | |
With NaH; In N-methyl-acetamide; | EXAMPLE 67 3'-Methoxy-2'-methylcarbamoyloxanilic acid ethyl ester. 72 Slow addition of 4.98 g. (0.03 mole) of 6-amino-o-anisamide to a mixture of 57% NaH (1.32 g., 0.0315 mole) in 50 ml. dimethylformamide was carried out at room temperature. After the evolution of H2 ceased, the mixture was cooled to 3 C. and 2.06 ml. (0.033 mole) of methyliodide was slowly added at 3-5 C. The temperature was allowed to go up to room temperature and stir for 2 hours. The mixture was concentrated, the residue extracted into ethylacetate-water, the mixture was basified, and the ethylacetate layer was washed with water, brine and dried. Concentration gave a tan solid that was crystallized (ethanol), giving 0.45 g. (8%) of 6-amino-N-methyl-o-anisamide mp. 186-189 C. |
With NaH; In N-methyl-acetamide; | EXAMPLE 67 3'-Methoxy-2'-methylcarbamoyloxanilic acid ethyl ester. 72 Slow addition of 4.98 g. (0.03 mole) of 6-amino-o-anisamide to a mixture of 57% NaH (1.32 g., 0.0315 mole) in 50 ml. dimethylformamide was carried out at room temperature. After the evolution of H2 ceased, the mixture was cooled at 3C. and 2.06 ml. (0.033 mole) of methyliodide was slowly added at 3-5C. The temperature was allowed to go up to room temperature and stir for 2 hours. The mixture was concentrated, the residue extracted into ethylacetate-water, the mixture was basified, and the ethylacetate layer was washed with water, brine and dried. Concentration gave a tan solid that was crystallized (ethanol), giving 0.45 g. (8%) of 6-amino-N-methyl-o-anisamide mp. 186-189C. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
EXAMPLE 42 2'-Carbamoyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 3, giving 4.74 g of the title compound, m.p. 128-132 C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.66; H, 5.93; N, 10.38. | ||
EXAMPLE 25 2'-Carbamoyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 12, giving 4.74 g. of the title compound, m.p. 128-132 C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00: Found: C, 55.66; H, 5.93; N, 10.38. | ||
EXAMPLE 25 2'-Carbamoyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 12, giving 4.74 g. of the title compound, m.p. 128-132 C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.66; H, 5.93; N, 10.38. |
EXAMPLE 25 2'-Carbamyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 12, giving 4.74 g. of the title compound, m.p. 128-132 C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.66; H, 5.93; N, 10.38. | ||
EXAMPLE 42 2'-Carbamoyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 3, giving 4.74 g of the title compound, m.p. 128-132 C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.66; H, 5.93; N, 10.38. | ||
EXAMPLE 42 2'-Carbamoyl-3'-methoxyoxanilic acid isopropyl ester. 57 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of isopropyl oxalyl chloride in a manner similar to example 3, giving 4.74 g of the title compound, m.p. 128-132C., after crystallization from benzene. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.66; H, 5.93; N, 10.38. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
EXAMPLE 41 2'-Carbamoyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 3, giving 4.81 g of the title compound, m.p. 158-161 C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.92; H, 5.93; N, 10.34. | ||
EXAMPLE 24 2'-Carbamoyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 12, giving 4.81 g. of the title compound, m.p. 158-161 C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00: Found: C, 55.92; H, 5.93; N, 10.34. | ||
EXAMPLE 24 2'-Carbamoyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 12, giving 4.81 g. of the title compound, m.p. 158-161 C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.92; H, 5.93; N, 10.34. |
EXAMPLE 24 2'-Carbamyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g., 0.03 mole) is condensed with 4.25 ml. (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 12, giving 4.81 g. of the title compound, m.p. 158-161 C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.92; H, 5.93; N, 10.34. | ||
EXAMPLE 41 2'-Carbamoyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 3, giving 4.81 g of the title compound, m.p. 158-161 C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.92; H, 5.93; N, 10.34. | ||
EXAMPLE 41 2'-Carbamoyl-3'-methoxyoxanilic acid n-propyl ester. 96 6-Amino-o-anisamide (4.98 g, 0.03 mole) is condensed with 4.25 ml (0.033 mole) of n-propyl oxalyl chloride in a manner similar to example 3, giving 4.81 g of the title compound, m.p. 158-161C., after crystallization from acetonitrile. Elemental Analysis for C13 H16 N2 O5: Calc'd: C, 55.71; H, 5.75; N, 10.00. Found: C, 55.92; H, 5.93; N, 10.34. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With NaH; In N-methyl-acetamide; | EXAMPLE 49 3'-Methoxy-2'-methylcarbamoyloxanilic acid ethyl ester. 72 Slow addition of 4.98 g. (0.03 mole) of 6-amino-o-anisamide to a mixture of 57% NaH (1.32 g., 0.0315 mole) in 50 ml. dimethylformamide was carried out at room temperature. After the evolution of H2 ceased, the mixture was cooled to 3 C. and 2.06 ml. (0.033 mole) of methyliodide was slowly added at 3-5 C. The temperature was allowed to go up to room temperature and stir for 2 hours. The mixture was concentrated, the residue extracted into ethyl acetate-water, the mixture was basified, and the ethyl acetate layer was washed with water, brine and dried. Concentration gave a tan solid that was crystallized (ethanol), giving 0.45 g (8%) Of 6-amino-N-methyl-o-anisamide m.p. 186-189 C. Elemental Analysis for C9 H12 N2 O2: Calculated: C, 59.98; H, 6.71; N, 15.55. Found: C, 60.42; H, 7.04; N, 15.42. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With pyridine; In dichloromethane; benzene; | The potassium salt (7.27 g., 0.03 mol.) and 1.5 ml. of pryidine are stirred at 6 C. in 125 ml. of benzene, and 25 ml. of oxalyl chloride is rapidly added. After stirring 1/2 hour at 15 C. the mixture is stripped at 15 C., and scrubbed with two portions of 130 ml. of benzene at 15 C., giving a crude mixture of 1-benzyl-1H-tetrazole-5-carbonyl chloride. This preparation of the acid chloride is kept cold and used immediately for acylation. 1-Benzyl-1H-tetrazole-5-carbonyl chloride (0.06 mol.) is dissolved in methylene chloride, and added to a 5-10 C. solution of <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (9.97 g., 0.06 mol.) and 5 ml. of pyridine in 270 ml. of methylene chloride. The reaction solution is stirred for 2 hours at room temperature, washed twice with water, twice with brine and dried over CaCl2. Evaporation of the solvent gives 23 g. of a pink solid which crystallizes from acetonitrile giving 15.7 g. of 1 benzyl-N-[2-carbamoyl-3-methoxyphenyl]-1H-tetrazole-5-carboxamide, m.p. 190-192 C. Analysis for: C17 H16 N6 O3: Calculated: C, 57.95; H, 4.58; N, 23.85; Found: C, 58.39; H, 4.63; N, 23.86. | |
With pyridine; In dichloromethane; benzene; | The potassium salt (7.27 g., 0.03 mol.) and 1.5 ml. of pyridine are stirred at 6 C. in 125 ml. of benzene, and 25 ml. of oxalyl chloride is rapidly added. After stirring 1/2 hour at 15 C. the mixture is stripped at 15 C., and scrubbed with two portions of 130 ml. of benzene at 15 C., giving a crude mixture of 1-benzyl-1H-tetrazole-5-carbonyl chloride. This preparation of the acid chloride is kept cold and used immediately for acylation. 1-Benzyl-1H-tetrazole-5-carbonyl chloride (0.06 mol.) is dissolved in methylene chloride, and added to a 5-10 C. solution of <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (9.97 g., 0.06 mol.) and 5 ml. of pyridine in 270 ml. of methylene chloride. The reaction solution is stirred for 2 hours at room temperature, washed twice with water, twice with brine and dried over CaCl2. Evaporation of the solvent gives 23 g. of a pink solid which crystallizes from acetonitrile giving 15.7 g. of 1 benzyl-N-[2-carbamoyl-3-methoxyphenyl]-1H-tetrazole-5-carboxamide, m.p. 190-192 C. Analysis for C17 H16 N6 O3: Calculated: C, 57.95; H, 4.58; N, 23.85. Found: C, 58.39; H, 4.63; N, 23.86. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | To a solution of 2-amino-6-methoxybenzoic acid (9.0 g, 53.8 mmol) in THF (270 mL) was added 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide hydrochloride (23.7 g, 123.7 mmol) and hydroxybenzotriazole (23.9 g, 156.0 mmol). The mixture was stirred at rt for 30 min, then N-methylmorpholine (18.2 g, 180.3 mmol) and NH4OH ( 50 vol % in H2O, 36 mL) were added. The reaction mixture was then stirred for 18 h at rt. After that time the reaction was concentrated under reduced pressure and diluted with ethyl acetate (600 mL). The organic phase was washed with brine (2×100 mL), dried over Na2SO4 and concentrated under reduced pressure to give 2-amino-6-methoxybenzamide (8.80 g, 98%) as a light yellow solid: 1H NMR (400 MHz, DMSO-d6): δ 7.55 (br s, 1H), 7.29 (br s, 1H), 7.01 (t, J=8.4 Hz, 1H), 6.36 (br s, 2H), 6.30 (dd, J=8.4, 0.8 Hz, 1H), 6.17 (dd, J=8.0, 1.2 Hz, 1H), 3.76 (s, 3H) | |
65% | To a stirred solution of 2-amino-6-methoxy-benzoicacid (3.00 g, 17.9 mmol) in THF (90 mL), EDCI (7.89 g, 41.1 mmol) and HOBt (7.95 g, 51.9 mmol) were added and stirred at room temperature for 30 minutes then N-methylmorpholine (6.15 g, 60.0 mmol) and aqueous 50% v/v NH4OH (12 mL, 171.4 mmol) was added. The mixture was stirred for 16 hours at room temperature. The solvent was removed under reduced pressure and the residue was extracted with ethylacetate (4*100 mL), the combined organic phase was washed with water and brine, and dried over anhydrous sodium sulfate; the solvent was evaporated to give 2-amino-6-methoxy-benzamide as an off-white solid. Yield: 1.90 g, (65%) | |
65% | Example 67 Preparation of 2-(3,5-Dimethyl-4-(2-(pyrrolidin-1-yl)ethoxy)phenyl)-5-methoxyquinazolin-4(3H)-one To a stirred solution of 2-amino-6-methoxy-benzoic acid (3.00 g, 17.9 mmol) in THF (90 mL), EDCl (7.89 g, 41.1 mmol) and HOBt (7.95 g, 51.9 mmol) were added and stirred at room temperature for 30 minutes then N-methylmorpholine (6.15 g, 60.0 mmol) and aqueous 50% v/v NH4OH (12 mL, 171.4 mmol) was added. The mixture was stirred for 16 hours at room temperature. The solvent was removed under reduced pressure and the residue was extracted with ethylacetate (4*100 mL), the combined organic phase was washed with water and brine, and dried over anhydrous sodium sulfate; the solvent was evaporated to give 2-amino-6-methoxy-benzamide as an off-white solid. Yield: 1.90 g, (65%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
55% | With toluene-4-sulfonic acid; sodium hydrogensulfite; In N,N-dimethyl acetamide; at 115℃; for 20.0h; | To a solution of 2-amino-6-methoxy-benzamide (1.00 g, 6.01 mmol) and <strong>[1039948-89-4]4-(2-hydroxy-ethoxy)-3,5-dimethyl-benzaldehyde</strong> (1.28 g, 6.59 mmol) in N,N-dimethylacetamide (15 mL) were added NaHSO3 (58.5 wt %, 0.68 g, 6.50 mmol) and p-TSA (0.23 g, 1.20 mmol) and the reaction mixture was heated at 115 C. for 20 hours, and cooled to room temperature. N,N-dimethylacetamide was removed under reduced pressure. The residue was diluted with water (50 mL), stirred for 30 minutes, and then filtered. The solid was suspended in dichloromethane (30 mL), stirred for 1 h, filtered, and dried under vacuum to give 2-[4-(2-hydroxyethoxy)-3,5-dimethylphenyl]-5-methoxy-3H-quinazolin-4-one as an off-white solid. Yield: 1.1 g (55%) |
55% | With toluene-4-sulfonic acid; sodium hydrogensulfite; In N,N-dimethyl acetamide; at 115℃; for 20.0h; | To a solution of 2-amino-6-methoxy-benzamide (1.00 g, 6.01 mmol) and <strong>[1039948-89-4]4-(2-hydroxy-ethoxy)-3,5-dimethyl-benzaldehyde</strong> (1.28 g, 6.59 mmol) in N,N-dimethylacetamide (15 mL) were added NaHSO3 (58.5 wt %, 0.68 g, 6.50 mmol) and p-TSA (0.23 g, 1.20 mmol) and the reaction mixture was heated at 115 C. for 20 hours, and cooled to room temperature. N,N-dimethylacetamide was removed under reduced pressure. The residue was diluted with water (50 mL), stirred for 30 minutes, and then filtered. The solid was suspended in dichloromethane (30 mL), stirred for 1 h, filtered, and dried under vacuum to give 2-[4-(2-hydroxy-ethoxy)-3,5-dimethyl-phenyl]-5-methoxy-3H-quinazolin-4-one as an off-white solid. Yield: 1.1 g (55%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
0.41 g | With toluene-4-sulfonic acid; sodium hydrogensulfite; In N,N-dimethyl acetamide; at 120℃; for 14h; | To a solution of 5-(2-((tert-butyldimethylsilyl)oxy)ethoxy)-6-(4-(methylsulfonyl)phenyl)-picolinaldehyde (0.54 g, 1.50 mmol) and <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (0.274 g, 1.65 mmol) in N,N-dimethylacetamide (15 ml) was added NaHSO3 (58.5 wt %, 0.41 g, 2.25 mmol) and p-toluenesulfonic acid monohydrate (0.057 g, 0.30 mmol). The reaction mixture was stirred at 120 C. for 14 h. After that time the reaction was cooled to rt, concentrated under reduced pressure, diluted with water (100 mL) and the precipitated solids were collected by filtration, washed with water and dried under vacuum. The product was washed with diethyl ether and dried to give 2-(5-(2-((tert-butyldimethylsilyl)oxy)ethoxy)-6-(4-(methylsulfonyl)-phenyl)pyridin-2-yl)-5-methoxyquinazolin-4(3H)-one (0.41 g) as a brown solid: ESI MS m/z 582 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
60% | With toluene-4-sulfonic acid; sodium hydrogensulfite; In N,N-dimethyl acetamide; at 120℃; for 20h; | To a solution of 5-methoxy-6-(4-(methylsulfinyl)phenyl)picolinaldehyde (0.83 g, 3.0 mmol) in N,N-dimethylacetamide (30 mL) was added <strong>[1591-38-4]2-amino-6-methoxybenzamide</strong> (0.50 g, 3.0 mmol) followed by NaHSO3 (0.47 g, 4.5 mmol) and p-toluenesulfonic acid monohydrate (0.57 g, 3.0 mmol). The reaction was heated at 120 C. for 20 h. After that time the reaction was cooled to rt, concentrated under reduced pressure and diluted with water (10 mL) and saturated Na2CO3 (2 mL). The precipitated solids were collected by filtration, washed with water and dried under vacuum. The product was purified by flash column chromatography (silica gel, 98:2 dichloromethane/methanol) followed by trituration with methanol to give 5-methoxy-2-(5-methoxy-6-(4-(methylsulfinyl)phenyl)pyridin-2-yl)quinazolin-4(3H)-one (0.758 g, 60%) as a white solid: mp 308-310 C.; 1H NMR (400 MHz, DMSO-d6): δ 11.36 (br s, 1H), 8.40 (d, J=8.4 Hz, 1H), 8.30 (d, J=8.8 Hz, 2H), 7.84-7.76 (m, 3H), 7.72 (t, J=8.4 Hz, 1H), 7.29 (d, J=7.6 Hz, 1H), 7.03 (d, J=8.4 Hz, 1H), 3.97 (s, 3H), 3.88 (s, 3H), 2.80 (s, 3H); ESI MS m/z 422 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
79% | With triethylamine; In tetrahydrofuran; at 0 - 20℃;Inert atmosphere; | General procedure: Asolutionoftheappropriatesubstituted2-aminobenzamide(1.0eq)inTHF(2.5mLpermmolsubstrate)wascooledto0Candtriethylamine(2.0eq)thentheappropriateacidchloride(1.2eq)inTHF(2mLpermmolsubstrate)wereaddedtothestirredsolution.ThereactionwasstirredatroomtemperatureuntilcompletionasindicatedbyTLC,whenthemixturewasdilutedwithEtOAcandquenchedwithNaHSO4(20mL).TheaqueousphasewasextractedwithEtOAc(320mL),combinedorganicphasesdriedoverMgSO4,excesssolventremovedinvacuoandtheresiduepurifiedbyFCC. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: A solution of anthranilamide (30 mmol) in 1 N HCl (120 mL) was stirred at 0 C for 20 min. Then, sodium nitrite (60 mmol) dissolved in deionized water (100 mL) was added dropwise to the above solution for 40 min. After another 2 h of stirring at 0 C, 30% NaOH solution was added slowly to adjust the pH to 8.0. The reaction mixture was allowed to stir vigorously for 15 min. The precipitated product was filtered off with suction, washed with deionized water (200 mL), and dried to afford compound 4 in yield of 82%. | ||
General procedure: A solution of anthranilamide (30 mmol) in 1N HCl (120 mL) was stirred at 0 C for 20 min. Then, sodium nitrite (60 mmol) dissolved in deionized water (100 mL) was added dropwise to the above solution for 40 min. After another 2 h of stirringat 0 C, 30% NaOH solution was added slowly to adjustp H value to 8.0. The reaction mixture was allowed to stir vigorously for 15 min. The precipitated product was filtered, washed with deionized water (200 mL), and dried to afford compounds 10 in yields of 40-92%. | ||
With hydrogenchloride; sodium nitrite; In N,N-dimethyl-formamide; at 0℃; for 0.666667h; | General procedure: A solution of sodium nitrite (4.14 g, 60 mmol) in 0.5 N HCl (240 mL) was stirred at 0 C for 20 min. Then anthranilamide (3.96 g, 30 mmol) dissolved in N, N-dimethylformamide (DMF, 15 mL) was added dropwise to the above solution for 40 min. After another 1 h of stirring at 0 C, 30% aqueous ammonia was added slowly to adjust the pH to 10.0. The reaction mixture was allowed to stir vigorously for 15 min and then add acid to adjust pH 2.0. After stirring for 30 min, the precipitated product was filtered off with suction, washed with water (200 mL) and dried to afford afford the product. The yields of substituted 1,2,3-benzotriazin-4-ones in yields of 84-92%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With ammonium carbonate; In 1,4-dioxane; at 60℃; for 8h; | General procedure: A suspension of isatoic anhydride (35 mmol), ammonium carbonate (140 mmol), and 1,4-dioxane (150 mL) was heated at 60 C. After stirring for 8 h, the reaction mixture was cooled to room temperature and evaporated underreduced pressure, and then water (200 mL) was added to the residue, which was extracted with DCM (80 mL × 3). The organic layerwas dried over anhydrous Na2SO4, and concentrated to give compound 3 in yield of 84%. | |
With ammonium carbonate; In 1,4-dioxane; at 60℃; for 8h; | General procedure: A suspension of substituted isatoic anhydride (35 mmol), ammonium carbonate (140 mmol), and 1,4-dioxane (150 mL) was heated at 60 C. After stirring for 8 h, the reaction mixture was cooled to room temperature and evaporated under reduced pressure, and then water (200 mL) was added to the residue, which was extracted with CH2Cl2 (380 mL). The organic layer was dried over anhydrous Na2SO4 and concentrated to give compounds 9 in yields of 63-94%. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
36% | With iodine; In dimethyl sulfoxide; at 110℃; | General procedure: I2 (362.25 mg, 1.43 mmol, 1.1 eq) was added to a mixture of 2j(272.77 mg, 1.3 mmol, 1 eq) and DMSO (3 mL). The solution wasstirred at 110C, then 1a1u (1 eq) in 3 mL DMSO was addeddropwise to the mixture during 1 h. After the complete disappearanceof the starting material, a sodium thiosulfate solution(0.2 g Na2S2O3 in 12 mL water) was added dropwise to the reactionsystem. Filtration and drying, the residue was purified by silica gelchromatography to yield the desired products 4a-4u. |
Tags: 1591-38-4 synthesis path| 1591-38-4 SDS| 1591-38-4 COA| 1591-38-4 purity| 1591-38-4 application| 1591-38-4 NMR| 1591-38-4 COA| 1591-38-4 structure
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