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Structure of 5654-97-7

Chemical Structure| 5654-97-7

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Product Details of [ 5654-97-7 ]

CAS No. :5654-97-7
Formula : C7H6N2O
M.W : 134.14
SMILES Code : N2C1=NC=CC=C1CC2=O
MDL No. :MFCD07367951
InChI Key :ZXSQEZNORDWBGZ-UHFFFAOYSA-N
Pubchem ID :13864095

Safety of [ 5654-97-7 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 5654-97-7 ] Show Less

Physicochemical Properties

Num. heavy atoms 10
Num. arom. heavy atoms 6
Fraction Csp3 0.14
Num. rotatable bonds 0
Num. H-bond acceptors 2.0
Num. H-bond donors 1.0
Molar Refractivity 39.53
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

41.99 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

1.13
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

0.03
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

0.0
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

-0.08
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

1.41
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

0.5

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-1.13
Solubility 9.84 mg/ml ; 0.0734 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-0.46
Solubility 46.1 mg/ml ; 0.343 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Very soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-2.48
Solubility 0.441 mg/ml ; 0.00329 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

No
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-7.1 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

1.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.56

Application In Synthesis of [ 5654-97-7 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 5654-97-7 ]

[ 5654-97-7 ] Synthesis Path-Downstream   1~35

  • 1
  • [ 5654-97-7 ]
  • [ 126807-18-9 ]
  • 2
  • [ 101860-97-3 ]
  • [ 5654-97-7 ]
YieldReaction ConditionsOperation in experiment
31% toluene-4-sulfonic acid; In pentan-1-ol; for 48h;Reflux; The mother liquor of the foregoing example was extracted three times with an equal volume of ethyl acetate and the combined organic phases were dried over sodium sulphate. Removal of the solvent afforded the product as colourless solid. A suspension of 2-amino-3-pyridineacetic acid (2.0 g, 12.0 mmol) and a catalytic amount of p-toluenesulfonic acid in amyl alcohol was refluxed for 48 h. After removal of the solvent from the clear solution, the residue was purified by column chromatography on silica gel using ethyl acetate : hexane (3:1) as eluent to provide a solid (0.5 g, 3.7 mmol, 31 %). 1H-NMR (400 MHz, DMSO-d6, delta = 2.49 ppm): 10.96 (s, 1H, NH), 8.02 (d, 1H, 3JH,H = 5.3 Hz, 6-CH), 7.52 (d, 1H, 3JH,H = 7.0 Hz, 4-CH), 6.91 (dd, 1H, 3JH,H = 7.0 Hz, 4JH,H = 5.3Hz, 5-CH), 3.53 (s, 2H, CH2). 13C-{1H}-NMR (150 MHz, DMSO-d6, delta = 39.5 ppm): 1765.8 (C2), 1508.2 (C7a), 146.1 (C6), 131.8 (C4), 120.4 (C3a), 117.3 (C5), 35.2 (C3).
  • 3
  • [ 121-69-7 ]
  • [ 438210-61-8 ]
  • [ 5654-97-7 ]
  • 4
  • [ 5654-97-7 ]
  • [ 74-88-4 ]
  • [ 109535-73-1 ]
YieldReaction ConditionsOperation in experiment
Step 3: 3,3-Dimethyl-1 ,3-dihydro-pyrrolo[2,3-b]pyridin-2-one1 ,3-dihydro-pyrrolo[2,3-b]pyridin-2-one (500mg, 3.73mmol) in dry THF (40 ml) under at atmosphere of nitrogen was treated with N1 ,N1 ,N2,N2-tetramethylethane-1 ,2- diamine (1.956 ml, 13.05 mmol). The mixture was cooled to -78C in an acetone/dry ice bath. n-BuLi (1.6M in Hexanes) (8.15 ml, 13.05 mmol) was added dropwise over 30mins. After addition, the mixture was stirred for a further 30 mins and then treated dropwise with methyl iodide (0.816 ml, 13.05 mmol) and stirred at RT overnight. The reaction was quenched by careful addition of NH4CI (20 ml) and the mixture was extracted with EtOAc (2 x75 ml). The organic portion was separated and washed with sat NaHC03, brine, dried (MgS04) and concentrated in vacuo to give a pale yellow powder. The methylation process was repeated twice to obtain the dimethylated product. Purification of the resulting solid by chromatography on silica eluting with 0% to 50% EtOAc in iso-hexane afforded the title product; H NMR (400 MHz, DMSO-d6) delta 10.95 (1 H, s), 8.05 (1 H, dd), 7.65 (1 H, dd), 6.95 (1 H, dd), 1.25 (6H, s).
0.1 g To a stirred solution of 7-Azaoxindole 1 (0.5 g ,3.73mmol ) in anhydrous THF(10 ml ) was added «-BuLi (0.47g,7.42 mmol)at -78 C followed by TMEDA(0.865 g, 7.42mmol ). After lh Mel( 0.876 g, 7.42 mmol) was added slowly and mixture was allowed to come up to room temperature. After stirring for lh , saturated aqueous ammonium chloride was added and the crude material was partitioned between water and ethyl acetate. Organic layer was separated, dried over sodium sulphate and concentrated under vacuum. Crude compound was purified by column chromatography by eluting with 40% ethyl acetate in pet ether to get the desired compound 2 (0.1 g)
0.1 g Step-1 [0050] To a stirred solution of 7-Azaoxindole 1 (0.5 g, 3.73 mmol) in anhydrous THF (10 ml) was added n-BuLi (0.47 g, 7.42 mmol) at -78 C. followed by TMEDA (0.865 g, 7.42 mmol). After 1 h MeI (0.876 g, 7.42 mmol) was added slowly and mixture was allowed to come up to room temperature. After stirring for 1 h, saturated aqueous ammonium chloride was added and the crude material was partitioned between water and ethyl acetate. Organic layer was separated, dried over sodium sulphate and concentrated under vacuum. Crude compound was purified by column chromatography by eluting with 40% ethyl acetate in pet ether to get the desired compound 2 (0.1 g)
  • 5
  • [ 113423-51-1 ]
  • [ 5654-97-7 ]
YieldReaction ConditionsOperation in experiment
91% With acetic acid; zinc; In acetonitrile; 7-Azaoxindole 3,3-Dibromo-7-azaoxindole (2.9 g) was dissolved in a mixture of 20 mL of acetic acid and 30 mL of acetonitrile. To the solution was added 6.5 g of zinc dust. The mixture was stirred for 2 hrs at room temperature. The solid was filtered from the mixture and the solvent evaporated. The residue was slurried with ethyl acetate. The ethyl acetate solution containing insoluble solid was passed through a short column of silica gel. The collected ethyl acetate solution was evaporated and the residue dried under vacuum to give 1.8 g (yield 91%) of 7-azaoxindole acetic acid salt.
91% With acetic acid; zinc; In acetonitrile; 7-Azaoxindole 3,3-Dibromo-7-azaoxindole (2.9 g) was dissolved in a mixture of 20 mL of acetic acid and 30 mL of acetonitrile. To the solution was added 6.5 g of zinc dust. The mixture was stirred for 2 hrs at room temperature. The solid was filtered from the mixture and the solvent evaporated. The residue was slurried with ethyl acetate. The ethyl acetate solution containing insoluble solid was passed through a short column of silica gel. The collected ethyl acetate solution was evaporated and the residue dried under vacuum to give 1.8 g (yield 91%) of 7-azaoxindole acetic acid salt.
91% With acetic acid; zinc; In acetonitrile; at 20℃; for 2h; 7-Azaoxindole 3,3-Dibromo-7-azaoxindole (2.9 g) was dissolved in a mixture of 20 ML of acetic acid and 30 ML of acetonitrile.. To the solution was added 6.5 g of zinc dust.. The mixture was stirred for 2 hrs at room temperature.. The solid was filtered from the mixture and the solvent evaporated.. The residue was slurried with ethyl acetate.. The ethyl acetate solution containing insoluble solid was passed through a short column of silica gel.. The collected ethyl acetate solution was evaporated and the residue dried under vacuum to give 1.8 g (yield 91%) of 7-azaoxindole acetic acid salt.
76% General procedure: To a stirred solution of azaindole (10a or 10b, 12.7 mmol) in tert-butyl alcohol (100 mL) and H2O (100 mL) at room temperature, Br2 (2.6 mL, 50.5 mmol) was added dropwise over 20 min. The mixture was stirred for 1 h and the yellow precipitate (10b, or 11b) was collected by filtration. The dried precipitate (10b, or 11b, 4.8 mmol) was refluxed with 5% Pd-C (1.0 g) in 60 mL of 8.8% HCOOH/CH3OH for 12 h under nitrogen. The catalyst was removed by filtration through a pad of celite. After removal of the solvent, the residual was adjusted to pH 8-9 by addition of saturated K2CO3 solution. The solution was stored in the refrigerator overnight and the precipitate was filtered to give 5-azaindolin-2-one (10) or 7-azaindolin-2-one (11).
70% With ammonium chloride; zinc; In tetrahydrofuran; water; at 20℃; for 2h; b) 7-Azaoxindole A solution of 3,3-dibromo-7-azaoxindole (2.0 g, 7.2 mmol) in THF (50 ML) is stirred at room temperature and a saturated aqueous solution of NH4Cl is added.. Activated zinc powder is added and the reaction mixture is stirred for 2 h.. The zinc is removed by filtration through a pad of diatomaceous earth and the organic layer is separated.. The aqueous layer is extracted with THF (10 ML) and the combined organic layers are dried over anhydrous MgSO4, filtered and evaporated.. The residue is slurried in 10:1 CHCl3:MeOH (15 ML) and filtered through a pad of silica gel and the filtrate is evaporated.. The residue is triturated with water and the solid is collected by filtration and dried under vacuum to give 7-azaoxindole, 0.668 g (70%). 1H NMR (DMSO-d6) delta 10.94 (s, 1H), 8.02 (d, 1H, J=5.2 Hz), 7.52 (d, 1H, J=6.8 Hz), 6.90 (dd, 1H, J=6.8, 5.2 Hz), 3.53 (s, 2H). MS(AP-ve) 133 (100) (M-H)
Step 2: 1 ,3-Dihydro-pyrrolo[2,3-b]pyridin-2-oneTo a solution of 3,3-dibromo-1 ,3-dihydro-pyrrolo[2,3-b]pyridin-2-one (4.6 g, 15.76 mmol) in AcOH (80 ml) under N2 was added zinc powder (10.30 g, 10 eq). The mixture was stirred at RT for 30 min under N2 and then filtered through Celite (filter material) to remove the Zn. AcOH was removed in vacuo and the mixture was diluted with EtOAc and washed with NaHC03. The organic phase was separated dried(MgS04) and concentrated in vacuo to afford the title product; 1H NMR (400 MHz, DMSO-d6) delta 10.95 (1 H, s), 8.05(1 H, d), 7.55 (1 H, d), 6.95 (1 H, t), 3.55 (2H, s).

  • 6
  • [ 205323-23-5 ]
  • [ 5654-97-7 ]
  • 8
  • [ 121-69-7 ]
  • 1-<2-amino-<3>pyridyl>-2-diazo-ethanol [ No CAS ]
  • [ 5654-97-7 ]
  • 9
  • [ 5654-97-7 ]
  • [ 19012-03-4 ]
  • 3-(1-methyl-1<i>H</i>-indol-3-ylmethylene)-1,3-dihydro-pyrrolo[2,3-<i>b</i>]pyridin-2-one [ No CAS ]
YieldReaction ConditionsOperation in experiment
With sodium ethanolate; In ethanol; at 20℃; General procedure: Various aldehydes (1.0 equiv) were added to stirred solutions of indolin-2-one, 5-chloroindolin-2-one or <strong>[5654-97-7]7-azaoxindole</strong> (1.0equiv) in absolute ethanol. After stirring at room temperature for 5 min NaOEt/EtOH (0.5 mL) was added and the mixture was then stirred at room temperature overnight. The solvent was then removed under vacuum. The residue was washed with saturated sodium chloride solution and then extracted with ethyl acetate. The organic layer was dried over anhydrous magnesium sulfate and concentrated under vacuum. The solid part was purified by chromatography over silica gel using ethyl acetate/petroleum ether as the eluent to afford desired compounds 1a-1g, 2a, 3a.
  • 10
  • [ 5654-97-7 ]
  • [ 957122-50-8 ]
  • [ 957122-52-0 ]
YieldReaction ConditionsOperation in experiment
With lithium hydroxide; water; In tetrahydrofuran; for 0.333333h; To a solution of 4,5-bis(bromomethyl)pyridine-2-carbonitrile from Step B (2.56 g, 8.83 mmol) and <strong>[5654-97-7]1,3-dihydro-2H-pyrrolo[2,3-b]pyridin-2-one</strong> [Marfat & Carta (1987) Tetrahedron Lett. 28, 4027] (1.18 g, 8.83 mmol) in THF (120 mL) and H2O (60 mL) was added lithium hydroxide monohydrate (1.11 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3×100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was purified by silica gel chromatography, eluting with a gradient of CH2Cl2:MeOH:NH4OH-100:0:0 to 95:5:1, to give the title compound. MS: m/z=263 (M+1).
With lithium hydroxide; In tetrahydrofuran; water; for 0.333333h; To a solution of 4,5-&/s(bromomethyl)pyridine-2-carbonitrile from Step B (2.56 g, 8.83 mmol) and l,3-dihydro-2H-pyrrolo[2,3-]pyridin-2-one [Marfat & Carta (1987) Tetrahedron Lett. 28, 4027] (1.18 g, 8.83 mmol) in THF (120 mL) and H2O (60 mL) was added lithium hydroxide monohydrate (1.1 1 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3 x 100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was purified by silica gel chromatography, eluting with a gradient of CH2Cl^MeOH: NH4OH - 100:0:0 to 95:5:1, to give the title compound. MS: mlz = 263 (M + 1).
With lithium hydroxide; In tetrahydrofuran; water; for 0.333333h; Step C. (+/-)-2'-Oxo-l2'.5,7-tetrahydrospiro[cyclopenta['c1pyridine-6.3'-pyrrolo[2.3-lpyridinel-3- carbonitrileTo a solution of 4,5-£/.s(bromomethyl)pyridine-2-carbonitrile from Step B (2.56 g, 8.83 mmol) and l,3-dihydro-2H-pyrrolo[2,3-Z>]pyridin-2-one [Marfat & Carta (1987) Tetrahedron Lett. 28, 4027] (1.18 g, 8.83 mmol) in TFfF (120 mL) and H2O (60 mL) was added lithium hydroxide monohydrate (1.11 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3 x 100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was purified by silica gel chromatography, eluting with a gradient of CH2Cl2:MeOH: NH4OH - 100:0:0 to 95:5: 1, to give the title compound. MS: m/z = 263 (M + l).
With lithium hydroxide monohydrate; water; In tetrahydrofuran; for 0.333333h; Step C. (+/-)-2'-Oxo-l25J-tetrahvdrospiro[cyclopenta[c]pyridine-6,3'-pyrrolo[23-6]rhoyridine]- 3-carbonitrileTo a solution of 4,5-6 J5(bromomethyi)pyridine-2-carbonitrile from Step B (2.56 g, 8.83 mmol) and 1 ,3-dihydro-2H-pyrrolo[2,3-^3pyridin-2-one (Marfat & Carta, Tetrahedron Lett. , 1987, 28, 4027) (1.18 g, 8.83 mmol) in TEtaF (120 mL) and Eta2O (60 mL) was added lithium hydroxide monohydrate (1.11 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3 * 100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was purified by silica gel chromatography, eluting with a gradient of CEt°Ct°-.MeOH: NH4OH from 100:0:0 to 95:5:1, to give the title compound. MS: mlz = 263 (M + 1).
With lithium hydroxide; water; In tetrahydrofuran; for 0.333333h; To a solution of 4,5-«(bromomethyl)pyridine-2-carbonitrile from Step B (2.56 g, 8.83 mmol) and l,3-dihydro-2H-pyrrolo[2,3-Z>]pyridin-2-one (1.18 g, 8.83 mmol, Marfat et al (1987) Tetrahedron Lett. 28, 4027) in THF (120 mL) and H2O (60 mL) was added lithium hydroxide monohydrate (1.11 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3 x 100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was purified by silica gel chromatography, eluting with a gradient of CH2Cl2: MeOH: NH4OH - 100:0:0 to 95:5:1, to give the title compound. MS: mlz = 263 (M + 1).
With lithium hydroxide; In tetrahydrofuran; water; for 0.333333h; Step C. (+--2'-Oxo-r,2',5J-tetrahvdrospirorcvclopentarc1pyridine-6,3'-pyrrolor2,3-?1pyridine1- 3-carbonitrileTo a solution of 4,5-/ro(bromomethyl)pyridine-2-carbonitrile from Step B (2.5610 g, 8.83 mmol) and l,3-dihydro-2H-pyrrolo[2,3-6]pyridin-2-one [Marfat & Carta (1987)Tetrahedron Lett. 28, 4027] (1.18 g, 8.83 mmol) in T?F (120 mL) and ?2O (60 mL) was added lithium hydroxide monohydrate (1.11 g, 26.5 mmol). After 20 min, the reaction mixture was poured onto water (100 mL) and extracted with EtOAc (3 x 100 mL). The combined organic extracts were dried over Na2SO4, filtered, and concentrated in vacuo. The crude product was15 purified by silica gel chromatography, eluting with a gradient of CH2Cl2:MeOH: NH4OH - 100:0:0 to 95:5: 1, to give the title compound. MS: mlz = 263 (M + 1).

  • 11
  • [ 956460-94-9 ]
  • [ 5654-97-7 ]
  • [ 956460-93-8 ]
YieldReaction ConditionsOperation in experiment
With acetic acid; zinc; In methanol; at 20℃; for 3h; 4B. 4-Fluoro-l,3-dihvdro-pyrrolor2,3-blpyridin-2-oneA mixture of 3,3-dibromo-4-fluoro-l,3-dihydro-pyrrolo[2,3-b]pyridin-2-one (312mg, l.Ommol), acetic acid (4.5ml), zinc dust (658mg, lOmmol) and methanol (4.5ml) was stirred at room temperature for 3 hours. Brine was added and the reaction was extracted with ethyl acetate. The organic liquors were washed with brine, dried (MgSO4) and concentrated to furnish the title compound (184mg, contains -40% des-fluorinated product). Used thus in further reactions.
With acetic acid; zinc; In methanol; at 20℃; for 3h; E2. 4-Fluoro-l,3-dihvdro-pyrrolor2,3-blpyridin-2-one; A mixture of 3,3-dibromo-4-fluoro-l,3-dihydro-pyrrolo[2,3-b]pyridin-2-one (312mg, l.Ommol), acetic acid (4.5ml), zinc dust (658mg, lOmmol) and methanol (4.5ml) was stirred at room temperature for 3 hours. Brine was added and the reaction was extracted with ethyl acetate. The organic liquors were washed with brine, dried (MgSO4) and concentrated to furnish the title compound (184mg, contains -40% des-fluorinated product). Used thus in further reactions.
With acetic acid; zinc; In methanol; at 20℃; for 3h; E2. 4-Fluoro-l ,3-dihydro-pyrrolo[2,3-blpyridin-2-oneA mixture of 3,3-dibromo-4-fluoro-l,3-dihydro-pyrrolo[2,3-b]pyridin-2-one(312mg, l.Ommol), acetic acid (4.5ml), zinc dust (658mg, lOmmol) and methanol (4.5ml) was stirred at room temperature for 3 hours. Brine was added and the reaction was extracted with ethyl acetate. The organic liquors were washed with brine, dried (MgSO4) and concentrated to furnish the title compound (184mg, contains -40% des-fluorinated product). Used thus in further reactions.
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  • [ 500-22-1 ]
  • [ 5654-97-7 ]
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  • [ 138625-36-2 ]
  • [ 5654-97-7 ]
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  • [ 155705-86-5 ]
  • [ 5654-97-7 ]
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  • [ 155705-76-3 ]
  • [ 5654-97-7 ]
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  • [ 155705-77-4 ]
  • [ 5654-97-7 ]
  • 17
  • [ 205323-19-9 ]
  • [ 5654-97-7 ]
  • 22
  • [ 5654-97-7 ]
  • [ 5654-95-5 ]
YieldReaction ConditionsOperation in experiment
65% With N-Bromosuccinimide; dimethyl sulfoxide; at 120℃; for 0.5h; Dried DMSO (6 mL) was heated to 120 C and a solution of 8 (500 mg, 3.7 mmol) and N-bromosuccinimide (690.6 mg, 3.9 mmol) in dry DMSO (2 mL) was added dropwise. The mixture was stirred at 120 C for 30 min, adjusted to pH 5-6 with aqueous NaHCO3 (5%) and extracted with ethyl acetate. The solvent was removed and the residue was purified by column chromatography using ethyl acetate: hexane (3:1) as eluent to afford 9 as a yellow solid (259.2 mg, 1.76 mmol, 65%). 1H NMR (400 MHz, DMSO-d6, delta = 2.49 ppm): 11.6 (s, 1H), 8.38 (dd, 1H, 3JH,H = 3.3 Hz, 4JH,H = 0.9 Hz), 7.87 (dd, 1H, 3JH,H = 5.0 Hz, 4JH,H = 1.1 Hz), 7.01 (dd, 1H, 3JH,H = 4.8 Hz, 4JH,H = 3.5 Hz). 13C-{1H} NMR (150 MHz, DMSO-d6, delta = 39.5 ppm): 183.0, 164.0, 160.0, 155.2, 132.6, 119.0, 112.9. C7H6N2O2. Found: C 56.66, H 2.83, N 18.72; requires: C 56.76, H 2.72, N 18.91.
31% A suspension of <strong>[5654-97-7]7-azaoxindole</strong> (500 mg, 3.7 mmol) and N-bromosuccinimide (690.6 mg, 3.9 mmol) in dry DMSO (13 mL) was stirred at 60 C for 2 h and at 95 C for 8 h under reduced pressure (100 hPa). The mixture was adjusted to pH 5-6 with aqueous NaHCO3 (5%) and extracted with ethyl acetate. The solvent was removed and the residue was purified by column chromatography using ethyl acetate : hexane (3:1) as eluent to afford a yellow solid (170 mg, 1.15 mmol, 31 %). 1H-NMR (400 MHz, DMSO-d6, delta = 2.49 ppm): 11.6 (s, 1H, NH), 8.38 (dd, 1H, 3JH,H = 5.2 Hz, 4JH,H = 1.8 Hz, 6-CH), 7.87 (dd, 1H, 3JH,H = 7.5 Hz, 4JH,H = 0.9 Hz, 4-CH), 7.09 (dd, 1H, 3JH,H = 7.4 Hz, 4JH,H = 5.2 Hz, 5-CH).
  • 23
  • [ 5654-97-7 ]
  • [ 126807-20-3 ]
  • 24
  • [ 5654-97-7 ]
  • 3-(3-oxo-3<i>H</i>-benzo[<i>b</i>]thiophen-2-ylidene)-1,3-dihydro-pyrrolo[2,3-<i>b</i>]pyridin-2-one [ No CAS ]
  • 25
  • [ 5654-97-7 ]
  • 3-amino-1,3-dihydro-pyrrolo[2,3-<i>b</i>]pyridin-2-one [ No CAS ]
  • 26
  • [ 6443-85-2 ]
  • [ 5654-97-7 ]
  • 27
  • [ 6635-88-7 ]
  • [ 5654-97-7 ]
  • 28
  • [ 101012-32-2 ]
  • [ 5654-97-7 ]
  • 29
  • [ 6959-48-4 ]
  • [ 5654-97-7 ]
  • 30
  • [ 5654-97-7 ]
  • [ 36805-97-7 ]
  • [ 295327-35-4 ]
YieldReaction ConditionsOperation in experiment
In N,N-dimethyl-formamide; Monomer 9: 3-Dimethylaminomethylene-<strong>[5654-97-7]7-azaoxindole</strong> This monomer was generated in situ (during library synthesis) from <strong>[5654-97-7]7-azaoxindole</strong> and dimethylformamide di-t-butylacetal in DMF.
In DMF (N,N-dimethyl-formamide); at 20℃; for 1h; This monomer was generated in situ (during library synthesis) from 7-aza-oxindole and dimethylformamide di-t-butylacetal in DMF.Monomer 9 and Monomer 10 were generated in situ by preparing stock solutions of the corresponding aza-oxindole. For example, 20.1 mg of 4-aza-oxindole was dissolved in 4.0 mL of ethanol. Both of the precursors for monomers 9 and 10 were transferred (0.20 ml/well) to a 96-well dry heating block (vwrBRAND Dry Block Heater, cat No.13259-066) according to the map below where M represents the monomer and A represents the amine. The ethanol was evaporated off at 50 C. until it was clear that there was no solvent remaining. DMF (0.20 mL) was added followed by the addition of dimethylformamide di-t-butylacetal (0.003 mL) and this remained at room temperature for 1 h.
  • 31
  • methyl 2-(3-nitropyridin-2-yl)acetate [ No CAS ]
  • [ 5654-97-7 ]
  • 32
  • [ 110-89-4 ]
  • [ 5654-97-7 ]
  • N-(2,4-dimethoxybenzyl)-N-(((5S)-3-(3-fluoro-4-formylphenyl)-2-oxo-1,3-oxazolidin-5-yl)methyl)acetamide [ No CAS ]
  • N-(2,4-dimethoxybenzyl)-N-(((5S)-3-(3-fluoro-4-((Z)-(2-oxo-1,2-dihydro-3H-pyrrolo(2,3-b)pyridin-3-ylidene)methyl)phenyl)-2-oxo-1,3-oxazolidin-5-yl)methyl)acetamide [ No CAS ]
YieldReaction ConditionsOperation in experiment
In methanol; ethanol; N-(2,4-dimethoxybenzyl)-N-(((5S)-3-(3-fluoro-4-((Z)-(2-oxo-1,2-dihydro-3H-pyrrolo(2,3-b)pyridin-3-ylidene)methyl)phenyl)-2-oxo-1,3-oxazolidin-5-yl)methyl)acetamide A suspension of Example 1C (200 mg) in ethanol (3 mL) was treated with <strong>[5654-97-7]1,3-dihydro-2H-pyrrolo(2,3-b)pyridin-2-one</strong> (81 mg), and piperidine (15 muL), sealed, heated to 100 C. for 24 hours, cooled to room temperature, and concentrated.. The concentrate was purified by flash column chromatography on silica gel with 2:98 methanol/dichloromethane to provide the desired product. MS (ESI(+)) m/e 548 (M+H)+; 1H NMR (300 MHz, DMSO-d6) delta 8.10 (t, 1H), 7.82 (t, 1H), 7.62 (m, 2H), 7.50 (d, 1H), 7.02-6.89 (m, 2H), 6.62-6.45 (m, 4H), 4.88 (m, 1H), 4.54-4.42 (m, 2H), 4.16 (t, 1H), 3.80 (m, 2H), 3.75 (s, 6H), 3.52 (m, 1H), 2.05 (s, 3H).
  • 33
  • [ 113423-51-1 ]
  • [ 7440-66-6 ]
  • [ 5654-97-7 ]
YieldReaction ConditionsOperation in experiment
With ammonium chloride; In tetrahydrofuran; CHCl3:MeOH; b 7-Azaoxindole A solution of 3,3-dibromo-7-azaoxindole (2.0 g, 7.2 mmol) in THF (50 mL) is stirred at room temperature and a saturated aqueous solution of NH4Cl is added. Activated zinc powder is added and the reaction mixture is stirred for 2 hours. The zinc is removed by filtration through a pad of diatomaceous earth and the organic layer is separated. The aqueous layer is extracted with THF (10 mL) and the combined organic layers are dried over anhydrous MgSO4, filtered and evaporated. The residue is slurried in 10:1 CHCl3:MeOH (15 mL) and filtered through a pad of silica gel and the filtrate is evaporated. The residue is triturated with water and the solid is collected by filtration and dried under vacuum to give 7-azaoxindole, 0.668 g (70%). 1H NMR (DMSO-d6) delta10.94 (s, 1H), 8.02 (d, 1H, J=5.2 Hz), 7.52 (d, 1H, J=6.8 Hz), 6.90 (dd, 1H, J=6.8, 5.2 Hz), 3.53 (s, 2H). MS(AP-ve) 133 (100) (M-H)
With ammonium chloride; In tetrahydrofuran; CHCl3:MeOH; b 1,3-Dihydro-2H-pyrrolo[2,3-b]pyridin-2-one A solution of 3,3-dibromo-1,3-dihydro-2H-pyrrolo[2,3-b]pyridin-2-one (2.0 g, 7.2 mmol) in THF (50 mL) was stirred at room temperature, and a saturated aqueous solution of NH4Cl was added. Activated zinc powder was added, and the reaction mixture was stirred for 2 hours. The zinc was removed by filtration through a pad of diatomaceous earth, and the organic layer was separated. The aqueous layer was extracted with THF (10 mL), and the combined organic layers were dried over anhydrous MgSO4, filtered and evaporated. The residue was slurried in 10:1 CHCl3:MeOH (15 mL) and filtered through a pad of silica gel, and the filtrate was evaporated. The residue was triturated with water, and the solid was collected by filtration and dried under vacuum to give the title compound, 0.668 g (70%). 1H NMR (d6-DMSO) delta10.94 (s, 1H), 8.02 (d, 1H, J=5.2 Hz), 7.52 (d, 1H, J=6.8 Hz), 6.90 (dd, 1H, J=6.8, 5.2 Hz), 3.53 (s, 2H). MS (AP-ve) 133 (100) (M-H)
With ammonium chloride; In tetrahydrofuran; CHCl3:MeOH; b 1,3-Dihydro-2H-pyrrolo[2,3-b]pyridin-2-one A solution of 3,3-dibromo-1,3-dihydro-2H-pyrrolo[2,3-b]pyridin-2-one (2.0 g, 7.2 mmol) in THF (50 mL) was stirred at room temperature, and a saturated aqueous solution of NH4Cl was added. Activated zinc powder was added, and the reaction mixture was stirred for 2 h. The zinc was removed by filtration through a pad of diatomaceous earth, and the organic layer was separated. The aqueous layer was extracted with THF (10 mL), and the combined organic layers were dried over anhydrous MgSO4, filtered and evaporated. The residue was slurried in 10:1 CHCl3:MeOH (15 mL) and filtered through a pad of silica gel, and the filtrate was evaporated. The residue was triturated with water, and the solid was collected by filtration and dried under vacuum to give the title compound, 0.668 g (70%). 1H NMR (d6-DMSO) delta 10.94 (s, 1H), 8.02 (d, 1H, J=5.2 Hz), 7.52 (d, 1H, J=6.8 Hz), 6.90 (dd, 1H, J=6.8, 5.2 Hz), 3.53 (s, 2H). MS (AP-ve) 133 (100) (M-H).
  • 34
  • [ 5654-97-7 ]
  • [ 63-74-1 ]
  • [ 36805-97-7 ]
  • [ 295327-24-1 ]
YieldReaction ConditionsOperation in experiment
36 mg (21%) With methanesulfonic acid; sodium hydrogencarbonate; In methanol; ethanol; water; N,N-dimethyl-formamide; Example 3A 4-[(2-Oxo-1,2-dihydro-3H-pyrrolo[2,3-b]pyridin-3-ylidene)methyl]amino}benzenesulfonamide Dimethylformamide di-tert-butyl acetal (180 mg, 0.89 mmol) was added to a solution of 1,2-dihydro-3H-pyrrolo[2,3-b]pyridin-2-one (70 mg, 0.52 mmol) in 0.25 ml DMF, and the reaction mixture was slowly warmed to 100 C. The cooled solution was then diluted with 5 ml of ethanol. Sulfanilamide (172 mg, 1.00 mmol) and methanesulfonic acid (60 mg, 0.63 mmol) were added, and the reaction mixture was stirred at reflux for 2 hours. The cooled solution was diluted with 4 ml of water, treated with NaHCO3 (70 mg, 0.83 mmol) and stirred 10 min. The resulting solid was filtered, washed with water and ethanol, and then suspended in boiling methanol and filtered upon cooling. Inorganics were removed by filtration through a short silica gel column, eluding with DMF. The resulting solution was diluted with an equal volume of ice water, and the suspension was refrigerated overnight. The solid was isolated by filtration and dried to give 36 mg (21%) of the title compound as a yellow solid: 1H NMR (400 MHz, DMSO-d6) (4:1 ratio of Z:E isomers): delta (Z) 11.07 (s, 1H), 10.76 (d, J=12.4 Hz, 1H), 8.67 (d, J=12.5 Hz, 1H), 7.92 (d, J=5.1 Hz, 1H), 7.84 (d, J=7.3 Hz,
36 mg (21%) With methanesulfonic acid; sodium hydrogencarbonate; In methanol; ethanol; water; N,N-dimethyl-formamide; EXAMPLE 3 4-[(2-oxo-1,2-Dihydro-3H-pyrrolo[2,3-b]pyridin-3-ylidene)methyl]amino}benzenesulfonamide Dimethylformamide di-tert-butyl acetal (180 mg, 0.89 mmol) was added to a solution of 1,2-dihydro-3H-pyrrolo[2,3-b]pyridin-2-one (70 mg, 0.52 mmol) in 0.25 ml DMF, and the reaction mixture was slowly warmed to 100 C. The cooled solution was then diluted with 5 ml of ethanol. Sulfanilamide (172 mg, 1.00 mmol) and methanesulfonic acid (60 mg, 0.63 mmol) were added, and the reaction mixture was stirred at reflux for 2 h. The cooled solution was diluted with 4 ml of water, treated with NaHCO3 (70 mg, 0.83 mmol) and stirred 10 min. The resulting solid was filtered, washed with water and ethanol, and then suspended in boiling methanol and filtered upon cooling. Inorganics were removed by filtration through a short silica gel column, eluding with DMF. The resulting solution was diluted with an equal volume of ice water, and the suspension was refrigerated overnight. The solid was isolated by filtration and dried to give 36 mg (21%) of the title compound as a yellow solid: 1H NMR (400 MHz, DMSO-d6) (4:1 ratio of Z:E isomers): delta (Z) 11.07 (s, 1H), 10.76 (d, J=12.4 Hz, 1H), 8.67 (d, J=12.5 Hz, 1H), 7.92 (d, J=5.1 Hz, 1H), 7.84 (d, J=7.3 Hz, 1H), 7.77 (d, J=8.7 Hz, 2H), 7.55 (d, J=8.6 Hz, 2H), 7.25 (s, 2H), 6.93 (dd, J=7.3, 5.1 Hz, 1H); (E) 10.79 (s, 1H), 9.70 (d, J=13.4 Hz, 1H), 8.23 (d, J=7.3 Hz, 1H). ESI-MS m/z 315 (M-H). Anal. Calcd. for C14H12N4O3S. 0.5 H2O: C, 51.68; H, 4.03; N, 17.03. Found: C, 51.75; H, 3.95; N, 17.26.
  • 35
  • [ 5654-97-7 ]
  • [ 36805-97-7 ]
  • 3-dimethylaminomethylene-1,3-dihydropyrrolo[2,3-b]pyridin-2-one [ No CAS ]
YieldReaction ConditionsOperation in experiment
In N,N-dimethyl-formamide; 3-[(Dimethylamino)methylidene]-1H-pyrrolo[2,3-b]pyridin-2-one This compound was prepared in situ (during library synthesis) from <strong>[5654-97-7]1,3-dihydro-2H-pyrrolo[2,3-b]pyridin-2-one</strong> and dimethylformamide di-t-butylacetal in DMF.
 

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