Purity | Size | Price | VIP Price | USA Stock *0-1 Day | Global Stock *5-7 Days | Quantity | |||||
{[ item.p_purity ]} | {[ item.pr_size ]} |
{[ getRatePrice(item.pr_usd, 1,1) ]} {[ getRatePrice(item.pr_usd,item.pr_rate,item.mem_rate) ]} |
{[ getRatePrice(item.pr_usd, 1,1) ]} | Inquiry {[ getRatePrice(item.pr_usd,item.pr_rate,item.mem_rate) ]} {[ getRatePrice(item.pr_usd,1,item.mem_rate) ]} | {[ item.pr_usastock ]} | Inquiry - | {[ item.pr_chinastock ]} | Inquiry - |
* Storage: {[proInfo.prStorage]}
CAS No. : | 84000-07-7 | MDL No. : | MFCD00153384 |
Formula : | C19H19NO4 | Boiling Point : | - |
Linear Structure Formula : | - | InChI Key : | JOFHWKQIQLPZTC-LBPRGKRZSA-N |
M.W : | 325.36 | Pubchem ID : | 688634 |
Synonyms : |
|
Num. heavy atoms : | 24 |
Num. arom. heavy atoms : | 12 |
Fraction Csp3 : | 0.26 |
Num. rotatable bonds : | 6 |
Num. H-bond acceptors : | 4.0 |
Num. H-bond donors : | 1.0 |
Molar Refractivity : | 90.07 |
TPSA : | 66.84 Ų |
GI absorption : | High |
BBB permeant : | Yes |
P-gp substrate : | No |
CYP1A2 inhibitor : | Yes |
CYP2C19 inhibitor : | No |
CYP2C9 inhibitor : | Yes |
CYP2D6 inhibitor : | No |
CYP3A4 inhibitor : | No |
Log Kp (skin permeation) : | -5.98 cm/s |
Log Po/w (iLOGP) : | 2.04 |
Log Po/w (XLOGP3) : | 3.24 |
Log Po/w (WLOGP) : | 3.34 |
Log Po/w (MLOGP) : | 2.55 |
Log Po/w (SILICOS-IT) : | 2.48 |
Consensus Log Po/w : | 2.73 |
Lipinski : | 0.0 |
Ghose : | None |
Veber : | 0.0 |
Egan : | 0.0 |
Muegge : | 0.0 |
Bioavailability Score : | 0.56 |
Log S (ESOL) : | -3.87 |
Solubility : | 0.0436 mg/ml ; 0.000134 mol/l |
Class : | Soluble |
Log S (Ali) : | -4.32 |
Solubility : | 0.0157 mg/ml ; 0.0000482 mol/l |
Class : | Moderately soluble |
Log S (SILICOS-IT) : | -4.56 |
Solubility : | 0.00898 mg/ml ; 0.0000276 mol/l |
Class : | Moderately soluble |
PAINS : | 0.0 alert |
Brenk : | 0.0 alert |
Leadlikeness : | 0.0 |
Synthetic accessibility : | 3.72 |
Signal Word: | Warning | Class: | N/A |
Precautionary Statements: | P261-P305+P351+P338 | UN#: | N/A |
Hazard Statements: | H315-H319-H335 | Packing Group: | N/A |
GHS Pictogram: |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
6.1 g | With triethylsilane; trifluoroacetic acid In chloroform at 20℃; for 10 h; Inert atmosphere | To a suspension of Fmoc-L-Ala (6.2 g, 19.9mmol) in toluene (400 mL)was added paraformaldehyde (4.0 g, 133 mmol) andp-toluenesulfonic acid (0.5 g, 13.3 mmol). The mixture was refluxedfor 30 min to remove azeotropic water. The solution was cooleddown, washed with 1 M aqueous NaHCO3 (2 × 100 mL) and dried over Na2SO4.Concentration in vacuo gave a white solid.To the above oxazolidinone in CHC13 (75 mL) was added trifluoroacetic acid (75mL) and triethylsilane (7.2 mL, 44.8 mmol). The reaction was stirred at roomtemperature for 10 h, and then concentrated in vacuo. The resulting oil wasre-dissolved in CH2C12 and concentrated for three times. The obtained oil crystallizedon standing. The crystals were re-dissolved in ether and concentrated. The collectedwhite solid 5 was washed with 5percent ether in hexane and dried (6.1 g, 94percent). . |
2.51 g | With triethylsilane; trifluoroacetic acid In chloroform at 20℃; | General procedure: Paraformaldehyde (1.92 g, 64.0 mmol) and p-toluenesulfonic acid (0.1920 g, 0.12 mmol) were added to a solution of Fmoc-Ala-OH (3.00 g, 9.6 mmol) in toluene (150 mL). The mixture was refluxed for 3 h with Dean–Stark apparatus. After cooled to room temperature, the resultant mixture was washed with saturated NaHCO3, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. After recrystallization with ethylacetate and petroleum ether, the intermediate was obtained without further purification. Trifluoroacetic acid (48.0 mL) and triethylsilane (4.60 mL,28.8 mmol) were added to a solution of above intermediate in CHCl3 (25 mL). The resultant mixture was stirred at room temperature overnight. After concentration, the residue was dissolved in CH2Cl2 and concentrated again; after repeated for three times, the oil liquid was turned to white solid. Then the white solid was dissolved in diethyl ether, concentrated, washed three times with petroleum ether. The residue was purified by flash-column chromatography on silica gel, to yield the white solid product (2.51 g,80percent yield). 1H NMR (400 MHz, CDCl3): (isomer I) d = 7.77–7.29(8H, m), 4.91 (1H, dd, J = 14.2, 6.8 Hz), 4.51–4.37 (2H, m), 4.27(1H, t, J = 6.7 Hz), 2.91 (3H, s), 1.46 (3H, d, 7.4 Hz); (isomer II)d = 7.77–7.29 (8H, m), 4.62 (1H, dd, J = 14.1, 6.9 Hz), 4.51–4.37(2H, m), 4.22 (1H, t, J = 6.4 Hz), 2.90 (3H, s), 1.37 (3H, d, J = 6.9 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
89% | To a solution of Fmoc-N(Me) L-Ala (6 g, 18.5 mmol) and HOBt (2.5 g, 18.5 mmol) in CH2Cl2 (60 ml) was added EDCI (3.5 g, 18.5 mmol) at 0 C. stirred for 1 hr and an additional hour at room temperature. To the reaction mixture was added Pd (PPh3)4 (3.6 g, 3.0 mmol), a solution of 4 (3 g, 6.2 mmol) in CH2Cl2 (30 ml) and DABCO (3.7 g, 31 mmol) at room temperature followed by stirred for 15 min. The reaction mixture was concentrated in vacuo and purified by silica gel column with (hexane:EtOAc=1:1) to furnish 5 (3.8 g, 89%) as pale yellow foam. [alpha]D -31.9 (c 1.56, CHCl3). 1H NMR (400 MHz, CDCl3): delta 1.20 (d, J=3.6 Hz, 3H), 1.41 (d, J=4.2 Hz, 3H), 1.75-1.98 (bm, 4H), 2.50 (bs, 1H), 2.95 (s, 3H), 3.60 (bm, 1H), 3.70 (bm, 1H), 4.01 (bm, 1H), 4.10 (dq J=5.6 Hz, 18.1 Hz, 2H), 4.20 (bm, 1H), 4.25 (bm,1H), 4.28 (bm, 2H) 4.32 (bm,1H), 4.40 (bm, 2H), 4.59 (dd, J=4.2, 8.0 Hz,1H), 6.81 (bd,1H), 7.28 (bm, 2H), 7.34 (bm, 5H), 7.52 (br m, 4H), 7.72 (d, J=7.6 Hz, m, 2H); 13C NMR (75 MHz, CDCl3): delta 16.1, 24.3, 27.5, 47.4, 48.5, 55.3, 56.4, 68.2, 74.0, 75.0, 79.8, 120.1, 125.2, 125.3, 127.2, 127.6, 127.9, 128.6, 129.9, 130.1, 132.2, 132.4, 133.3, 141.5, 153.5, 169.3, 171.4; IR (film): 3297, 2978, 1693, 1650, 1442, 1400, 1312, 1157, 10948, 758, 742 cm-1; MS:(ESI) [M+1]+ 708.2 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
73% | 8b was synthesized according to scheme 2. 1H NMR (400 MHz, CDCl3): delta 1.20 (d, J=6.4 Hz, 6H), 1.29 (d, J=6.8 Hz, 6H), 1.65-2.15 (m, 8H), 2.50 (s, 6H), 3.05 (q, J=6.8 Hz, 2H), 3.59 (m, 2H), 3.75 (m, 2H), 4.03 (m, 2H), 4.20 (ABq, J=11.6, 16.4 Hz, 4H), 4.39 (m, 2H), 4.60 (m 4H), 4.67 (dd, J=4.4 Hz, 8.4 Hz, 2H), 7.20 (m, 2H), 7.40 (m, 8H), 7.82 (d, J=8.4 Hz, 2H); MS:(ESI) [M+1]+ 937.5 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: Peptides were synthesized on a CEM Liberty automated microwave peptide synthesizer (CEM Microwave Technology Ltd, Buckingham, England, UK). In essence, each peptide was synthesised, on a 0.1-0.5mmol scale, using either Rink Amide MBHA resin (substitution 0.65 mmol/g, 100-200mesh) for peptides (18-20) or a pre-loaded 4-Sulfamylbutyryl AM resin (substitution 0.6-0.8 mmol/g, loaded as described under Section 2.1.2) for peptides (10a) and (11a-f). Fmoc removal was performed using 2 repeat cycles employing 20% (V/V) piperidine as solution in DMF. A first deprotection cycle of 30 s at 50W was employed, followed by a second deprotection cycle of 3min at 50W. Both cycles were carried out at 75C. Coupling steps were carried out by introducing each Fmoc-amino acid (0.2M solution in DMF) at a fivefold excess over resin loading, together with HBTU activation reagent and DIEA activation base used in the molar ratios HBTU/DIEA/AA (1/2/1). Each coupling reaction was performed for 10min, at 22W, at 75C. Finally, cleavage of peptides (18-20) from Rink Amide MBHA was performed manually, at room temperature, using TFA/H2O/triisopropylsilane (95/2.5/2.5, v/v/v), for two 1h cycles, with washing with dichloromethane after every cycle. The collected cleavage reaction mixtures and washes were evaporated under vacuum, at 30C, cooled, and the products precipitated by the addition of cold diethylether. The precipitates were collected by centrifugation (3-5 min at 2000-3000 g) and the pellet washed thoroughly with diethylether. This process was repeated 2-3 times, each time the solid was collected by centrifugation. On the other hand, cleavage of peptides 10a and 11a-f from 4-Sulfamylbutyryl AM resin was performed as described under Section 2.1.3. After a brief drying in vacuum to remove all traces of solvents, the peptide products were dissolved in 10% TFA aqueous solution and freeze dried. Peptide purity was checked through RP-HPLC, using Waters HPLC system fitted with Waters 1525 binary HPLC pump and Waters 2489 UV/visible detector (lambda216 nm) (Waters, Milford, Massachusetts, USA) and employing a Phenomenex Jupiter C12 column (250 ×4.66mm; particle size, 10mum). The runs were carried out on an analytical scale with a flow rate of 1ml/min. An elution gradient was utilized to resolve the crude product components that went from 90% solvent A (0.05% TFA in H2O)/10% Solvent B (0.05% TFA in CH3OH) to 10% solvent A/90% solvent B in 60min. Peptides with crude purity less than 95% were purified with semi-preparative RP-HPLC, using Phenomenex Jupiter C12 column (250 ×21.20mm; particle size, 10mum) and using the same above stated elution gradient with a flow rate of 10ml/min. 2.1.2 General procedure for 4-sulfamylbutyryl AM ?Safety-Catch? resin loading. 4-Sulfamylbutyryl AM Resin (625mg, 0.5mmol) suspended in 17ml CHCl3, DIEA (476.6mul, 2.5mmol) and an Fmoc-amino acid [(2S,4R)-Fmoc-4-phenyl-pyrrolidine-2-carboxylic acid (620mg, 1.5mmol); (2S,4S)-Fmoc-4-phenoxy-pyrrolidine-2-carboxylic acid (643mg, 1.5mmol); Fmoc-Tic-OH (600mg, 1.5mmol)] were added to a 100ml round bottom flask. The reaction mixture was stirred for 10min, cooled to -20C and after 20min PyBop (780mg, 1.5mmol) was added as solid. The reaction mixture was stirred for 8h at -20C after which the resin was filtered and washed with CHCl3 (3 ×5ml). The resin was dried in a desiccator under vacuum. The resin loading was checked spectrophotometrically by performing Fmoc-group removal on accurately weighed samples (?4mg) of resin derivatized by these three Fmoc-derivatives, and measuring the formation of the dibenzofulvene-piperidine adduct (molar absorptivity epsilon=5253M-1cm-1 at lambda290nm), using a UV spectrophotometer (50 Scan UV-Visible Spectrophotometer, VARIAN, Australia). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: Peptides were synthesized on a CEM Liberty automated microwave peptide synthesizer (CEM Microwave Technology Ltd, Buckingham, England, UK). In essence, each peptide was synthesised, on a 0.1-0.5mmol scale, using either Rink Amide MBHA resin (substitution 0.65 mmol/g, 100-200mesh) for peptides (18-20) or a pre-loaded 4-Sulfamylbutyryl AM resin (substitution 0.6-0.8 mmol/g, loaded as described under Section 2.1.2) for peptides (10a) and (11a-f). Fmoc removal was performed using 2 repeat cycles employing 20% (V/V) piperidine as solution in DMF. A first deprotection cycle of 30 s at 50W was employed, followed by a second deprotection cycle of 3min at 50W. Both cycles were carried out at 75C. Coupling steps were carried out by introducing each Fmoc-amino acid (0.2M solution in DMF) at a fivefold excess over resin loading, together with HBTU activation reagent and DIEA activation base used in the molar ratios HBTU/DIEA/AA (1/2/1). Each coupling reaction was performed for 10min, at 22W, at 75C. Finally, cleavage of peptides (18-20) from Rink Amide MBHA was performed manually, at room temperature, using TFA/H2O/triisopropylsilane (95/2.5/2.5, v/v/v), for two 1h cycles, with washing with dichloromethane after every cycle. The collected cleavage reaction mixtures and washes were evaporated under vacuum, at 30C, cooled, and the products precipitated by the addition of cold diethylether. The precipitates were collected by centrifugation (3-5 min at 2000-3000 g) and the pellet washed thoroughly with diethylether. This process was repeated 2-3 times, each time the solid was collected by centrifugation. On the other hand, cleavage of peptides 10a and 11a-f from 4-Sulfamylbutyryl AM resin was performed as described under Section 2.1.3. After a brief drying in vacuum to remove all traces of solvents, the peptide products were dissolved in 10% TFA aqueous solution and freeze dried. Peptide purity was checked through RP-HPLC, using Waters HPLC system fitted with Waters 1525 binary HPLC pump and Waters 2489 UV/visible detector (lambda216 nm) (Waters, Milford, Massachusetts, USA) and employing a Phenomenex Jupiter C12 column (250 ×4.66mm; particle size, 10mum). The runs were carried out on an analytical scale with a flow rate of 1ml/min. An elution gradient was utilized to resolve the crude product components that went from 90% solvent A (0.05% TFA in H2O)/10% Solvent B (0.05% TFA in CH3OH) to 10% solvent A/90% solvent B in 60min. Peptides with crude purity less than 95% were purified with semi-preparative RP-HPLC, using Phenomenex Jupiter C12 column (250 ×21.20mm; particle size, 10mum) and using the same above stated elution gradient with a flow rate of 10ml/min. 2.1.2 General procedure for 4-sulfamylbutyryl AM ?Safety-Catch? resin loading. 4-Sulfamylbutyryl AM Resin (625mg, 0.5mmol) suspended in 17ml CHCl3, DIEA (476.6mul, 2.5mmol) and an Fmoc-amino acid [(2S,4R)-Fmoc-4-phenyl-pyrrolidine-2-carboxylic acid (620mg, 1.5mmol); (2S,4S)-Fmoc-4-phenoxy-pyrrolidine-2-carboxylic acid (643mg, 1.5mmol); Fmoc-Tic-OH (600mg, 1.5mmol)] were added to a 100ml round bottom flask. The reaction mixture was stirred for 10min, cooled to -20C and after 20min PyBop (780mg, 1.5mmol) was added as solid. The reaction mixture was stirred for 8h at -20C after which the resin was filtered and washed with CHCl3 (3 ×5ml). The resin was dried in a desiccator under vacuum. The resin loading was checked spectrophotometrically by performing Fmoc-group removal on accurately weighed samples (?4mg) of resin derivatized by these three Fmoc-derivatives, and measuring the formation of the dibenzofulvene-piperidine adduct (molar absorptivity epsilon=5253M-1cm-1 at lambda290nm), using a UV spectrophotometer (50 Scan UV-Visible Spectrophotometer, VARIAN, Australia). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: Peptides were synthesized on a CEM Liberty automated microwave peptide synthesizer (CEM Microwave Technology Ltd, Buckingham, England, UK). In essence, each peptide was synthesised, on a 0.1-0.5mmol scale, using either Rink Amide MBHA resin (substitution 0.65 mmol/g, 100-200mesh) for peptides (18-20) or a pre-loaded 4-Sulfamylbutyryl AM resin (substitution 0.6-0.8 mmol/g, loaded as described under Section 2.1.2) for peptides (10a) and (11a-f). Fmoc removal was performed using 2 repeat cycles employing 20% (V/V) piperidine as solution in DMF. A first deprotection cycle of 30 s at 50W was employed, followed by a second deprotection cycle of 3min at 50W. Both cycles were carried out at 75C. Coupling steps were carried out by introducing each Fmoc-amino acid (0.2M solution in DMF) at a fivefold excess over resin loading, together with HBTU activation reagent and DIEA activation base used in the molar ratios HBTU/DIEA/AA (1/2/1). Each coupling reaction was performed for 10min, at 22W, at 75C. Finally, cleavage of peptides (18-20) from Rink Amide MBHA was performed manually, at room temperature, using TFA/H2O/triisopropylsilane (95/2.5/2.5, v/v/v), for two 1h cycles, with washing with dichloromethane after every cycle. The collected cleavage reaction mixtures and washes were evaporated under vacuum, at 30C, cooled, and the products precipitated by the addition of cold diethylether. The precipitates were collected by centrifugation (3-5 min at 2000-3000 g) and the pellet washed thoroughly with diethylether. This process was repeated 2-3 times, each time the solid was collected by centrifugation. On the other hand, cleavage of peptides 10a and 11a-f from 4-Sulfamylbutyryl AM resin was performed as described under Section 2.1.3. After a brief drying in vacuum to remove all traces of solvents, the peptide products were dissolved in 10% TFA aqueous solution and freeze dried. Peptide purity was checked through RP-HPLC, using Waters HPLC system fitted with Waters 1525 binary HPLC pump and Waters 2489 UV/visible detector (lambda216 nm) (Waters, Milford, Massachusetts, USA) and employing a Phenomenex Jupiter C12 column (250 ×4.66mm; particle size, 10mum). The runs were carried out on an analytical scale with a flow rate of 1ml/min. An elution gradient was utilized to resolve the crude product components that went from 90% solvent A (0.05% TFA in H2O)/10% Solvent B (0.05% TFA in CH3OH) to 10% solvent A/90% solvent B in 60min. Peptides with crude purity less than 95% were purified with semi-preparative RP-HPLC, using Phenomenex Jupiter C12 column (250 ×21.20mm; particle size, 10mum) and using the same above stated elution gradient with a flow rate of 10ml/min. 2.1.2 General procedure for 4-sulfamylbutyryl AM ?Safety-Catch? resin loading. 4-Sulfamylbutyryl AM Resin (625mg, 0.5mmol) suspended in 17ml CHCl3, DIEA (476.6mul, 2.5mmol) and an Fmoc-amino acid [(2S,4R)-Fmoc-4-phenyl-pyrrolidine-2-carboxylic acid (620mg, 1.5mmol); (2S,4S)-Fmoc-4-phenoxy-pyrrolidine-2-carboxylic acid (643mg, 1.5mmol); Fmoc-Tic-OH (600mg, 1.5mmol)] were added to a 100ml round bottom flask. The reaction mixture was stirred for 10min, cooled to -20C and after 20min PyBop (780mg, 1.5mmol) was added as solid. The reaction mixture was stirred for 8h at -20C after which the resin was filtered and washed with CHCl3 (3 ×5ml). The resin was dried in a desiccator under vacuum. The resin loading was checked spectrophotometrically by performing Fmoc-group removal on accurately weighed samples (?4mg) of resin derivatized by these three Fmoc-derivatives, and measuring the formation of the dibenzofulvene-piperidine adduct (molar absorptivity epsilon=5253M-1cm-1 at lambda290nm), using a UV spectrophotometer (50 Scan UV-Visible Spectrophotometer, VARIAN, Australia). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: Peptides were synthesized on a CEM Liberty automated microwave peptide synthesizer (CEM Microwave Technology Ltd, Buckingham, England, UK). In essence, each peptide was synthesised, on a 0.1-0.5mmol scale, using either Rink Amide MBHA resin (substitution 0.65 mmol/g, 100-200mesh) for peptides (18-20) or a pre-loaded 4-Sulfamylbutyryl AM resin (substitution 0.6-0.8 mmol/g, loaded as described under Section 2.1.2) for peptides (10a) and (11a-f). Fmoc removal was performed using 2 repeat cycles employing 20% (V/V) piperidine as solution in DMF. A first deprotection cycle of 30 s at 50W was employed, followed by a second deprotection cycle of 3min at 50W. Both cycles were carried out at 75C. Coupling steps were carried out by introducing each Fmoc-amino acid (0.2M solution in DMF) at a fivefold excess over resin loading, together with HBTU activation reagent and DIEA activation base used in the molar ratios HBTU/DIEA/AA (1/2/1). Each coupling reaction was performed for 10min, at 22W, at 75C. Finally, cleavage of peptides (18-20) from Rink Amide MBHA was performed manually, at room temperature, using TFA/H2O/triisopropylsilane (95/2.5/2.5, v/v/v), for two 1h cycles, with washing with dichloromethane after every cycle. The collected cleavage reaction mixtures and washes were evaporated under vacuum, at 30C, cooled, and the products precipitated by the addition of cold diethylether. The precipitates were collected by centrifugation (3-5 min at 2000-3000 g) and the pellet washed thoroughly with diethylether. This process was repeated 2-3 times, each time the solid was collected by centrifugation. On the other hand, cleavage of peptides 10a and 11a-f from 4-Sulfamylbutyryl AM resin was performed as described under Section 2.1.3. After a brief drying in vacuum to remove all traces of solvents, the peptide products were dissolved in 10% TFA aqueous solution and freeze dried. Peptide purity was checked through RP-HPLC, using Waters HPLC system fitted with Waters 1525 binary HPLC pump and Waters 2489 UV/visible detector (lambda216 nm) (Waters, Milford, Massachusetts, USA) and employing a Phenomenex Jupiter C12 column (250 ×4.66mm; particle size, 10mum). The runs were carried out on an analytical scale with a flow rate of 1ml/min. An elution gradient was utilized to resolve the crude product components that went from 90% solvent A (0.05% TFA in H2O)/10% Solvent B (0.05% TFA in CH3OH) to 10% solvent A/90% solvent B in 60min. Peptides with crude purity less than 95% were purified with semi-preparative RP-HPLC, using Phenomenex Jupiter C12 column (250 ×21.20mm; particle size, 10mum) and using the same above stated elution gradient with a flow rate of 10ml/min |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
203 mg | Example 17:Synthesis of linker building blocks 15aAmine 14 (503 mg, 0.635 mmol, assuming a MW of 791.1 g/mol of crude 1 ) was dissolved in 4 mL DMF (anhydrous, mol. sieve). Fmoc-N-Me-Ala-OH (310 mg, 0.953 mmol), COMU (408 mg, 0.953 mmol) and DIPEA (332 mu, 1.906 mmol) were added and the reaction was allowed to stir for 3 h at RT. 150 mu piperidine and 150 mu DBU were added to the mixture and stirring was continued for further 60 min. 400 mu acetic acid were added and product was purified by HPLC. HPLC fractions containing product 15a were neutralized with a saturated NaHC03 solution and extracted twice with DCM. Combined organic phases were dried over Na2S04 and volatiles were removed under reduced pressure. Yield: 203 mg (0.336 mmol). MS: m/z 604.1 = [M+H]+ (MW calculated = 603.9 g/mol). | |
Example 17: Synthesis of linker building blocks 15a, 15b, and 15c Linker building block 15a was synthesized according to the following scheme: 14 Amine 14 (503 mg, 0.635 mmol, assuming a MW of 791.1 g/mol of crude 1 ) was dissolved in 4 mL DMF (anhydrous, mol. sieve). Fmoc-N-Me-Ala-OH (310 mg, 0.953 mmol), COMU (408 mg, 0.953 mmol) and DIPEA (332 mu, 1.906 mmol) were added and the reaction was allowed to stir for 3 h at RT. 150 mu piperidine and 150 mu DBU were added to the mixture and stirring was continued for further 60 min. 400 mu acetic acid were added and product was purified by HPLC. HPLC fractions containing product 15a were neutralized with a saturated NaHC03 solution and extracted twice with DCM. Combined organic phases were dried over Na2S04 and volatiles were removed under reduced pressure. Yield: 203 mg (0.336 mmol). MS: m/z 604.1 = [M+H]+ (MW calculated = 603.9 g/mol). | ||
203 mg | Amine 1 (503 mg, 0.635 mmol, assuming a MW of 791.1 g/mol of crude 1 ) was dissolved in 4 mL DMF (anhydrous, mol. sieve). Fmoc-N-Me-Ala-OH (310 mg, 0.953 mmol), COMU (408 mg, 0.953 mmol) and DIPEA (332 mu, 1.906 mmol) were added and the reaction was allowed to stir for 3 h at RT. 150 mu piperidine and 150 mu DBU were added to the mixture and stirring was continued for further 60 min. 400 mu acetic acid were added and product was purified by HPLC. HPLC fractions containing product 2a were neutralized with a saturated aqueous NaHC03 solution and extracted twice with DCM. Combined organic phases were dried over Na2S04 and volatiles were removed under reduced pressure. Yield: 203 mg (0.336 mmol). MS: m/z 604.1 = [M+H]+ (MW calculated = 603.9 g/mol). |
203 mg | Amine 14 (503 mg, 0.635 mmol, assuming a MW of791.1 g/mol of crude 1) was dissolved in 4 mL DMF(anhydrous, mol. sieve). Fmoc-N-Me-Ala-OH (310 mg,0.953 mmol), COMU (408 mg, 0.953 mmol) and DIPEA(332 jil, 1.906 mmol) were added and the reaction was allowed to stir for 3 h at RT. 150 jil piperidine and 150 jil DBU were added to the mixture and stirring was continued for further 60 mm. 400 j±1 acetic acid were added and product was purified by HPLC. HPLC fractions containing product1 5a were neutralized with a saturated NaHCO3 solution and extracted twice with DCM. Combined organic phases were dried over Na2504 and volatiles were removed under reduced pressure.Yield: 203 mg (0.336 mmol). MS: mlz 604.1=[M+H] (MW calculated=603.9 gmol). | |
203 mg | Amine 14 (503 mg, 0.635 mmol, assuming a MW of791.1 g/mol of crude 1) was dissolved in 4 mL DMF (anhydrous, mol. sieve). Fmoc-N-Me-Ala-OH (310 mg, 0.953 mmol), COMU (408 mg, 0.953 mmol) and DIPEA (332 jtl, 1.906 mmol) were added and the reaction wasallowed to stir for 3 h at RT. 150 jtl piperidine and 150 jtl DBU were added to the mixture and stirring was continued for further 60 mm. 400 tl acetic acid were added and product was purified by HPLC. HPLC fractions containing product 1 5a were neutralized with a saturated NaHCO3 solution andextracted twice with DCM. Combined organic phases were dried over Na2SO4 and volatiles were removed under reduced pressure.Yield: 203 mg (0.336 mmol).MS: m/z 604.1=[M+H] (MW calculated=603.9 gmol). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With scandium tris(trifluoromethanesulfonate); In dichloromethane; | Example 1 Esterification of Maytansinol with Fmoc-N-methyl-L-alanine (Fmoc-N-Me-D/L-Ala-MDC) A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90.5% | Example 1 Esterification of Maytansinol with Fmoc-N-methyl-L-alanine (Fmoc-N-Me-D/L-Ala-MDC) A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. | |
90.5% | Example 1 Esterification of Maytansinol with Fmoc-N-methyl-L-alanine (Fmoc-N-Me-D/L-Ala-MDC) A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. | |
90.5% | Example 3 Esterification of Maytansinol with Fmoc-N-methyl-L-alanine (Fmoc-N-Me-D/L-Ala-MDC) A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
43.1%; 46% | A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. | |
43.1%; 46% | A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2C12 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2C12. The combined organic phase was washed with NaHCC aq, brine, dried over anhydrous Na2S04. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2 MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDC13): 50.77 (3H, s), 1.22-1.32 (6H, m),1.40-1.48 (lH, m), 1.63 (3H, s), 2.13 (1H, dd, J= 14.4, 2.8 Hz), 2.53 (1H, dd, J= 14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J = 9.6 Hz), 3.07 (1H, d, J = 12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J = 8.8 Hz), 3.59 (1H, d, J = 11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J= 10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J= 6.8 Hz), 5.65 ( 1H, dd, J= 15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J = 15.2 , 11.2 Hz), 6.52 (1H, d, J= 1.2Hz), 6.70 (1H, d, J= 10.8 Hz), 6.79 (1H, d, J = 1.2 Hz), 7.33 (1H, t, J = 7.6 Hz), 7.36 (1H, t, J = 7.6 Hz), 7.39 (1H, d, J = 7.6 Hz), 7.49 (1H, d, J = 7.6 Hz), 7.70 (1H, d, J= 7.6 Hz), 7.72 (1H, d, J= 7.6 Hz). LC-MS (M+Na+) calc : 894.3, found: 894.3. Fmoc-N-Me-D- Ala-MDC : white solid (0.3993 g, 43.1% yield), XH NMR (400 MHz, CDC13): 50.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J= 7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz ), 2.63 (1H, dd, J= 14.4, 12.4 Hz), 2.85 (1H, d, J = 9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J= 9.2 Hz), 3.51 (1H, d, J = 12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 ( 1H, dd, J= 15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J= 10.8 Hz), 6.40 (1H, dd, J= 15.2 , 11.2 Hz), 6.79 (1H, d, J = 1.6 Hz), 6.84 (1H, d, J = 1.6 Hz ), 7.32 (2H, t, J =7.6 Hz), 7.41 (2H, t, J =7.6 Hz), 7.61 (2H, d, J =7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc: 894.3, found: 894.3. | |
43.1%; 46% | A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2Cl2 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2Cl2. The combined organic phase was washed with NaHCO3 aq, brine, dried over anhydrous Na2SO4. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDCl3): delta0.77 (3H, s), 1.22-1.32 (6H, m), 1.40-1.48 (1H, m), 1.63 (3H, s), 2.13 (1H, dd, J=14.4, 2.8 Hz), 2.53 (1H, dd, J=14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J=9.6 Hz), 3.07 (1H, d, J=12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J=8.8 Hz), 3.59 (1H, d, J=11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J=10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J=6.8 Hz), 5.65 (1H, dd, J=15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J=15.2, 11.2 Hz), 6.52 (1H, d, J=1.2 Hz), 6.70 (1H, d, J=10.8 Hz), 6.79 (1H, d, J=1.2 Hz), 7.33 (1H, t, J=7.6 Hz), 7.36 (1H, t, J=7.6 Hz), 7.39 (1H, d, J=7.6 Hz), 7.49 (1H, d, J=7.6 Hz), 7.70 (1H, d, J=7.6 Hz), 7.72 (1H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. Fmoc-N-Me-D-Ala-MDC: white solid (0.3993 g, 43.1% yield), 1H NMR (400 MHz, CDCl3): delta0.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J=7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz), 2.63 (1H, dd, J=14.4, 12.4 Hz), 2.85 (1H, d, J=9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J=9.2 Hz), 3.51 (1H, d, J=12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 (1H, dd, J=15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J=10.8 Hz), 6.40 (1H, dd, J=15.2, 11.2 Hz), 6.79 (1H, d, J=1.6 Hz), 6.84 (1H, d, J=1.6 Hz), 7.32 (2H, t, J=7.6 Hz), 7.41 (2H, t, J=7.6 Hz), 7.61 (2H, d, J=7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc.: 894.3. found: 894.3. |
43.1%; 46% | Maytansinol (0. 600 g, 1.062 mmol), Fmoc-N-methyl-L-alanine (6.911 g, 21 · 24 mmol), Scandium trifluoromethanesulfonate (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) were placed in a 250 ml Schlenck flask and dichloromethane (100 mL) was added under nitrogen and stirred at -8C for 0.5 h. DIC (2.949 g, 23.37 mmol) was added dropwise and the reaction was stirred at -8 C for 0.5 h. The temperature was slowly raised to room temperature, and the catalyst was recovered by filtration. The filtrate was quenched with dilute hydrochloric acid, extracted with methylene chloride, washed successively with saturated sodium bicarbonate and saturated brine, dried over anhydrous sodium sulfate, and solvent was removed by rotary evaporation. Column chromatography (silica gel, CH2C12/Me0H 30:1) gave the diastereoisomer mixture Fmoc-N-Me-D/L-Ala-MDC as a white solid (0.8385 g, 90.5% yield). Further column chromatography (silica gel, CH2C12/MeOH 100:1 to 20:1) gave two pure diastereomeric components. The larger Rf component was determined to be the D-aminoacyl ester diastereoisomer (Fmoc-N-Me-D-Ala-MDC), and the smaller Rf component was determined to be the L-aminoacyl ester iastereoisomer (Fmoc-N-Me-L-Ala-MDC). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
46%; 43.1% | A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2C12 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2C12. The combined organic phase was washed with NaHCC aq, brine, dried over anhydrous Na2S04. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2 MeOH 30:1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D L-Ala-MDC: white solid (0.8385 g, 90.5%). Further column chromatography (silica gel, CH2Cl2/MeOH 100:1 to 20:1) gave two fractions as pure diastereomer. The higher Rf fraction was determined to be the D-aminoacyl ester diastereomer (Fmoc-N-Me-D-Ala-MDC), while the lower Rf fraction was the desired L-aminoacyl ester (Fmoc-N-Me-L-Ala-MDC). Fmoc-N-Me-L-Ala-MDC: white solid (0.4262 g, 46.0% yield), 1H NMR (400 MHz, CDC13): 50.77 (3H, s), 1.22-1.32 (6H, m),1.40-1.48 (lH, m), 1.63 (3H, s), 2.13 (1H, dd, J= 14.4, 2.8 Hz), 2.53 (1H, dd, J= 14.4, 10.8 Hz), 2.64 (3H, s), 2.88 (3H, s), 3.00 (1H, d, J = 9.6 Hz), 3.07 (1H, d, J = 12.4 Hz), 3.35 (3H, s), 3.48 (1H, d, J = 8.8 Hz), 3.59 (1H, d, J =11.2 Hz), 3.97 (3H, s), 4.13-4.19 (1H, m), 4.15 (1H, s), 4.24 (1H, t, J= 10.8 Hz), 4.72-4.77 (2H, m), 5.03 (1H, q, J= 6.8 Hz), 5.65 ( 1H, dd, J= 15.2, 9.2 Hz), 6.29 (1H, br), 6.41 (1H, dd, J = 15.2 , 11.2 Hz), 6.52 (1H, d, J= 1.2Hz), 6.70 (1H, d, J= 10.8 Hz), 6.79 (1H, d, J = 1.2 Hz), 7.33 (1H, t, J = 7.6 Hz), 7.36 (1H, t, J = 7.6 Hz), 7.39 (1H, d, J = 7.6 Hz), 7.49 (1H, d, J = 7.6 Hz), 7.70 (1H, d, J= 7.6 Hz), 7.72 (1H, d, J= 7.6 Hz). LC-MS (M+Na+) calc : 894.3, found: 894.3. Fmoc-N-Me-D- Ala-MDC : white solid (0.3993 g, 43.1% yield), XH NMR (400 MHz, CDC13): 50.84 (3H, s), 1.22-1.27 (3H, m), 1.40-1.48 (1H, m), 1.51 (3H, d, J= 7.6 Hz), 1.67 (3H, s), 2.20 (1H, dd, J=14.4, 2.8 Hz ), 2.63 (1H, dd, J= 14.4, 12.4 Hz), 2.85 (1H, d, J = 9.6 Hz), 2.96 (3H, s), 3.17 (3H, s), 3.20 (1H, s), 3.24 (3H, s), 3.40 (1H, d, J= 9.2 Hz), 3.51 (1H, d, J = 12.8 Hz), 3.99 (3H, s), 4.20-4.28 (2H, m), 4.38-4.43 (2H, m), 4.80-4.98 (2H, m), 5.80 ( 1H, dd, J= 15.2, 11.2 Hz), 6.18 (1H, s), 6.25 (1H, d, J= 10.8 Hz), 6.40 (1H, dd, J= 15.2 , 11.2 Hz), 6.79 (1H, d, J = 1.6 Hz), 6.84 (1H, d, J = 1.6 Hz ), 7.32 (2H, t, J =7.6 Hz), 7.41 (2H, t, J =7.6 Hz), 7.61 (2H, d, J =7.6 Hz), 7.77 (2H, d, J=7.6 Hz). LC-MS (M+Na+) calc: 894.3, found: 894.3. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90.5% | A mixture of maytansinol (0.600 g, 1.062 mmol), Fmoc-N-Me-L-Ala (6.911 g, 21.24 mmol), Sc(OTf)3 (0.314 g, 0.637 mmol) and DMAP (0.389 g, 3.186 mmol) in CH2C12 (100 mL) was stirred for 0.5 h at -8 C. DIC (2.949 g, 23.37 mmol) was added dropwise, stirred for 0.5 h, warmed to r.t. slowly, filtered to recover the Lewis acid catalyst, the filtrate was quenched with diluted HCl and extracted with CH2C12. The combined organic phase was washed with NaHC03 aq, brine, dried over anhydrous Na2S04. The solvent was removed under reduced pressure. Chromatography (silica gel, CH2Cl2/MeOH 30: 1) gave the desired product as a mixture of diastereomer Fmoc-N-Me-D/L-Ala-MDC: white solid (0.8385 g, 90.5%). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
1. Peptide synthesis 1.1 General synthetic procedures A general method for the synthesis of the peptidomimetics of the present invention is exemplified in the following. This is to demonstrate the principal concept and does not limit or restrict the present invention in any way. A person skilled in the art is easily able to modify these procedures, especially, but not limited to, choosing a different starting position within the ring system, to still achieve the preparation of the claimed cyclic peptidomimetic compounds of the present invention. Coupling of the first protected amino acid residue to the resin . In a dried flask, 2-chlorotritylchloride resin (polystyrene, 1percent crosslinked; loading: 1.4 mMol/g) was swollen in dry CH2CI2 for 30 min (7 mL CH2CI2 per g resin). A solution of 0.8 eq of the Fmoc-protected amino acid and 6 eq of DIPEA in dry CH2CI2/DMF (4/1) (10 mL per g resin) was added. After shaking for 2-4 h at rt the resin was filtered off and washed successively with CH2CI2, DMF, CH2CI2, DMF and CH2CI2. Then a solution of dry CH2CI2/MeOH/DIPEA (17:2:1) was added (10 mL per g resin). After shaking for 3 x 30 min the resin was filtered off in a pre-weighed sinter funnel and washed successively with CH2CI2, DMF, CH2CI2, MeOH, CH2CI2, MeOH, CH2CI2 (2x) and Et20 (2x). The resin was dried under high vacuum overnight. The final mass of resin was calculated before the qualitative control. Loading was typically 0.6 - 0.7 mMol/g. The following preloaded resins were prepared: Fmoc-Dab(Boc)-2-chlorotrityl resin, Fmoc-DDab(Boc)-2-chlorotrityl resin, Fmoc-Lys(Boc)-2-chlorotrityl resin, Fmoc- Trp(Boc)-2-chlortrityl resin, Fmoc-Phe-2-chlortrityl resin; Fmoc-Val-2-chlorotrityl resin, Fmoc-Pro-2-chlorotrityl resin, Fmoc-Arg(Pbf)-2-chlorotrityl resin and Fmoc-Glu(iBu)-2- chlorotrityl resin. Synthesis of the fully protected peptide fragment The synthesis was carried out on a Syro-peptide synthesizer (MultiSynTech GmbH) using 24 to 96 reaction vessels. In each vessel 0.04 mMol of the above resin were placed and the resin was swelled in CH2CI2 and DMF for 15 min, respectively. The following reaction cycles were programmed and carried out: Step Reagent Time 1 CH2CI2, wash and swell (manual) 1 x 3 min 2 DMF, wash and swell 2 x 30 min 3 20percent piperidine/DMF 1 x 5 min and 1 x 15 min 4 DMF, wash 5 x 1 min 5 3.5 eq Fmoc amino acid/3.5 eq HOAt in DMF + 3.5 eq PyBOP/7 eq DIPEA or 3.5 eq DIC 1 x 40 min 6 3.5 eq Fmoc amino acid/DMF + 3.5 eq HATU or PyBOP or HCTU + 7 eq DIPEA 1 x 40 min 7 DMF, wash 5 x 1 min 8 20percent piperidine/DMF 1 x 5 min and 1 x 15 min 9 DMF, wash 5 x 1 min 10 CH2CI2, wash (at the end of the synthesis) 3 x 1 min Steps 5 to 9 are repeated to add each amino-acid residue. After the termination of the synthesis of the fully protected peptide fragment, one of the procedures A - E, as described herein below, was adopted subsequently, depending on which kind of interstrand linkages, as described herein below, were to be formed. Finally, the peptides were purified by preparative reverse phase LC-MS, as described herein below. Procedure A: Cyclization and work up of a backbone cyclized peptide having no interstrand linkage Cleavage, backbone cyclization and deprotection After assembly of the linear peptide, the resin was suspended in 1 mL of 1percent TFA in CH2CI2 (v/v; 0.14 mMol) for 3 minutes. After filtration the filtrate was neutralized with 1 mL of 20percent DI PEA in CH2CI2 (v/v; 1.15 mMol). This procedure was repeated four times to ensure completion of the cleavage. An alternative cleavage method comprises suspension of the resin in lmL of 20percent HFIP in CH2CI2 (v/v; 1.9 mMol) for 30 minutes, filtration and repetition of the procedure. The resin was washed three times with 1 mL of CH2CI2. The CH2CI2 layers containing product were evaporated to dryness. The fully protected linear peptide was solubilised in 8 mL of dry DM F. Then 2 eq of HATU and 2 eq of HOAt in dry DM F (1-2 mL) and 4 eq of DIPEA in dry DM F (1-2 mL) were added to the peptide, followed by stirring for ca. 16 h. The volatiles were removed by evaporation. The crude cyclic peptide was dissolved in 7 mL of CH2CI2 and washed three times with 4.5 mL 10percent acetonitrile in water (v/v). The CH2CI2 layer was then evaporated to dryness. To fully deprotect the peptide, 7 mL of cleavage cocktail TFA/DODT/thioanisol/H20 (87.5 :2.5:5:5) or TFA/TIS/H20 (95:2.5 :2.5) were added, and the mixture was kept for 2.5-4 h at room temperature until the reaction was completed. The reaction mixture was evaporated close to dryness, the peptide precipitated with 7 mL of cold Et20/pentane and finally washed 3 times with 4 mL of cold Et20/pentane. Procedures Bl and B2: Cyclization and work up of a backbone cyclized peptide having a disulfide interstrand linkage Bl: Formation of a disulfide interstrand linkage using DMSO After cleavage, backbone cyclization and deprotection of the linear peptide, as described in the corresponding section of procedure A, th... |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
Single-Coupling Procedure To the reaction vessel containing resin from the previous step was added piperidine:DMF (20:80 v/v, 2.0mL). The mixture was periodically agitated for 3 minutes and then the solution was drained through the frit.To the reaction vessel was added piperidine:DMF (20:80 v/v, 2.0 mL). The mixture was periodically agitatedfor 3 minutes and then the solution was drained through the frit. The resin washed successively six times asfollows: for each wash, DMF (2.0 mL) was added to top of the vessel (not through the bottom frit) and theresulting mixture was periodically agitated for 30 seconds before the solution was drained through the frit. Tothe reaction vessel was added the amino acid (0.2M in DMF, 1.0 mL, 2 eq), then HATU (0.2M in DMF, 1.0mL, 2 eq), and finally DIPEA (0.4M in DMF, 1.0 mL, 4 eq). The mixture was periodically agitated for 15minutes, then the reaction solution was drained through the frit. The resin washed successively four times asfollows: for each wash, DMF (2.0 mL) was added to top of the vessel (not through the bottom frit) and theresulting mixture was periodically agitated for 30 seconds before the solution was drained through the frit. Tothe reaction vessel was added acetic anhydride (2.0 mL). The mixture was periodically agitated for 10minutes, then the solution was drained through the frit. The resin washed successively four times as follows:for each wash, DMF (2.0 mL) was added to top of the vessel (not through the bottom frit) and the resultingmixture was periodically agitated for 90 seconds before the solution was drained through the frit. Theresulting resin was used directly in the next step. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
6.4 mg | General procedure: Example 1001 was prepared on Rink Resin following the general synthetic procedures: Fmoc-Gly-OH "Symphony Method B: Resin-swelling procedure" was followed Fmoc-Cys(Trt)-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Arg(Pbf)-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-nMethyl-Nle-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-nMethyl-Nle-OH "Symphony Method B: Secondary amine-coupling procedure", was followed Fmoc-Trp(Boc)-OH "Symphony Method B: Secondary amine-coupling procedure", was followed Fmoc-Ser(tBu)-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Trp(Boc)-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Cyclopenty-Gly-OH "Manual Coupling procedure A" was followed Fmoc-Leu-OH "Symphony Method B: Secondary amine-coupling procedure", was followed Fmoc-His(Trt)-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Pro-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Asn(Trt)-OH "Symphony Method B: Secondary amine-coupling procedure", was followed Fmoc-nMethyl-Ala-OH "Symphony Method B: Standard-coupling procedure " was followed Fmoc-Phe-OH "Symphony Method B: Secondary amine-coupling procedure" was followed "Symphony Method B: Final capping procedure" was followed "Global Deprotection Method F" was followed "Cyclization Method D" was followed The crude material was purified via preparative LC/MS with the following conditions: Column: Waters XBridge C18, 19 x 250 mm, 5-mupiiota particles; Mobile Phase A: 5:95 acetonitrile: water with 0.1% trifluoroacetic acid; Mobile Phase B: 95:5 acetonitrile: water with 0.1% trifluoroacetic acid; Gradient: 15- 65% B over 25 minutes, then a 5-minute hold at 100% B; Flow: 20 mL/min. Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 6.4 mg, and its estimated purity by LCMS analysis was 100%. Analysis LCMS Condition D : Retention time = 1.67 mm; ESI-MS(+) m/z 947.2 (M+2H). Analysis LCMS Condition E. : Retention time = 1.57 min; ESI-MS(+) m/z 946.7 (M+2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
14.1 mg | General procedure: Example 5001 was prepared as follows. To a 10 mL polypropylene solid- phase reaction vessel was added Rink-Merrifield resin (178 mg, 0.100 mmol), and the reaction vessel was placed on the Prelude peptide synthesizer. "Prelude Method A: Resin-swelling procedure" was followed. Then a series of amino acids couplings was sequentially performed on the Prelude following "Prelude Method A: Single- coupling procedure" if the N-terminus of the resin-bound peptide was a primary amine or "Prelude Method A: Double-coupling procedure" if the N-terminus of the resin-bound peptide was a secondary amine. "Prelude Method A: Chloroacetyl chloride coupling procedure" was followed; then "Global Deprotection Method A" was followed; then "Cyclization Method A" was followed. As indicated, 1-((((9H- fluoren-9-yl)methoxy)carbonyl)amino)cyclopropanecarboxylic acid (Fmoc-AcPc- OH) was used in the synthesis. The crude material was purified via preparative LC/MS with the following conditions: Column: XBridge CI 8, 19 x 200 mm, 5-muiotaeta particles; Mobile Phase A: 5:95 acetonitrile: water with 10-mM ammonium acetate; Mobile Phase B: 95:5 acetonitrile: water with 10-mM ammonium acetate; Gradient: 10-50% B over 30 minutes, then a 5-minute hold at 100% B; Flow: 20 mL/min. Fractions containing the desired product were combined and dried via centrifugal evaporation. The yield of the product was 14.1 mg, and its estimated purity by LCMS analysis was 95%. Analysis condition A: Retention time = 2.10 min; ESI-MS(+) m/z 888.3 (M-2H). Analysis condition B: Retention time = 2.85 min; ESI-MS(+) m/z 890.5 (M+2H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
General procedure: Linear peptomers were synthesized on L-phenylalanine 2-chlorotrityl resin (0.14 mmol/g) using extended Fmoc coupling (Fmoc amino acid/HATU/DIPEA in DMF, overnight) and peptoid synthesis conditions (bromoacetic acid/DIC in DMF, 1hr, then amine in DMF, overnight). The linear peptomers were cleaved from resin with 30% HFIP in DCM. Cyclization was performed in dilute conditions (<3 mM peptomer in a solution of 1:1 ACN:THF) with COMU (2 equiv) and DIPEA (10 equiv) and stirred overnight at room temperature. Each sub-library was briefly purified using Isolute 103 SPE cartridge (200 mg/6 mL, Biotage).Fmoc deprotectionTwo resin-volumes of 2% DBU 2% piperidine in DMF were added to the resin and the tube was capped and agitated for 20 min. The resin was then drained and washed with 2 resin-volumes of DMF (x3) and 2 resin-volumes of DCM (x3). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
10146] Deprotected Rink amide resin (1 g, 0.59 mmol) was reacted with a solution of 2-bromoacetic acid (500 mg, 3.6 mmol) and DIC (554 IL, 3.6 mmol) in dry DMF (5 mE). This was reacted in a conventional microwave 3x15 s at 10% power. This was repeated one time. Then the resin was washed with dry DMF and then treated with a solution of N-(4-aminobutyl)-N-methyl carbamic acid tort-butyl ester (200 mg, 1 mmol) in dry DMF (5 mE). This was reacted in a conventional microwave 3 xiS s at 10% power and then shaken at room temperature for 15 mm. Then treated with a solution of Fmoc-N-methylalanine (290 mg, 0.89 mmol), DIC (277 pL, 1.77 mmol), HOAt (241 mg, 1.77 mmol) and DIEA (308 pL, 1.77 mmol) in dry DMF (5 mE) and reacted at 75 C. for 10 minutes using the Siotage SP-Wave microwave synthesizet The resin was then transferred to a peptide synthesis vessel and washed with DMF. Then the Fmoc was deprotected by shaking at room temperature with 20% piperidine/DMF (5 mE) for 2x10 mm. This cycle was repeated 3 more times. After a total of 4 couplings and deprotections the resin was reacted with a solution of Hoechst carboxylate (300 mg, 0.59 mmol), DIC (277 pL, 1.77 mmol), HOAt (241 mg, 1.77 mmol) and DIEA (308 pL,1.77 mmol) in dry DMF (5 mE) by microwaving at 75 C. for 10 mm using the Siotage SP-Wave microwave synthesizer. Then the resin was washed with DMF and DCM and cleaved with 30% TFADCM at it for 10 mm. Immediately concentrated and azeotroped with toluene 3x. UV indicated about 20 tmoles of product. The yellow oil was dissolved in dry DMF (1.5 mE) and added Hoechst carboxylate (10 mg, 20.3 tmoles), HOAt (3 mg, 22.3 tmoles), DIC (6 pL, 44.6 tmoles) and DIEA (250 pi). This was microwaved at 75 C. for 10 mm using the Siotage SP-Wave microwave synthesize and then the solution was concentrated in vacuo. Purified by reverse phase HPEC as described above. Isolated 2.52 tmoles of product, 3.7 mg. 2H-K4NMeS (C81H102N1909): MS calculated: 1484.80; MS found: 1484. 55; tR=31 mm. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
41% | To 2-chlorotrityl chloride resin (50.3?mg, 80?mumol) pre-swollen in DMF for 30?min, was added a solution of Fmoc-Gly-OH (48.0?mg, 161?mumol) and iPr2EtN (42?muL, 241?mumol) in DMF (2?mL). The reaction mixture was gently agitated at room temperature for 2?h. The resin was filtered and washed with DMF. The peptidyl resin was treated with a solution of 20percent piperidine in DMF and the mixture agitated at room temperature for 30?min. The resin was filtered and washed with DMF. To the peptidyl resin was added a mixture of Fmoc-N-MePhe-OH (96.9?mg, 241?mumol), PyBOP (126?mg, 242?mumol), HOBt·H2O (37.0?mg, 242?mumol) and DIPEA (56?muL, 321?mumol) in DMF (2?mL). The reaction mixture was agitated at room temperature for 2?h, after which the resin was filtered and washed with DMF. The peptidyl resin was treated with a solution of 20percent piperidine in DMF and the mixture agitated at room temperature for 30?min. The resin was filtered and washed with DMF. To the peptidyl resin was added a mixture of Fmoc-Leu-OH (85.5?mg, 242?mumol), HATU (91.8?mg, 241?mumol), HOAt (33.2?mg, 244?mumol) and DIPEA (56?muL, 321?mumol) in DMF (2?mL). The reaction mixture was agitated at room temperature for 2?h, after which the resin was filtered and washed with DMF. The peptidyl resin was treated with a solution of 20percent piperidine in DMF and the mixture agitated at room temperature for 30?min. The resin was filtered and washed with DMF. To the peptidyl resin was added a mixture of Fmoc-N-MeAla-OH (79.1?mg, 243?mumol), HATU (93.0?mg, 245?mumol), HOAt (33.4?mg, 245?mumol) and DIPEA (56?muL, 321?mumol) in DMF (2?mL). The reaction mixture was agitated at room temperature for 2?h, after which the resin was filtered and washed with DMF. The peptidyl resin was treated with a solution of 20percent piperidine in DMF and the mixture agitated at room temperature for 30?min. The resin was filtered and washed with DMF. To the peptidyl resin was added 20percent HFIP in anhydrous CH2Cl2 and agitated at room temperature for 2?h. The mixture was filtered and purified by preparative RP-HPLC to afford the linear tetrapeptide 3 (14.4?mg, 33.2?mumol, 41percent) as white fluffy flakes; 1H NMR (500?MHz, D2O): delta 7.12 (5H, m), 5.00 (1H, dd, J?=?11.0, 5.0?Hz), 4.69 (1H, m), 4.60 (1H, m), 3.70 (3H, m), 3.17 (1H, m), 2.98 (1H, m), 2.87 (3H, s), 2.50 (3H, s), 1.37 (3H, m), 1.25 (3H, d, J?=?6.5?Hz), 0.74 (3H, d, J?=?6.5?Hz), 0.72 (3H, d, J?=?6.0?Hz). ; 13C NMR (125 MHz, D2O): delta 173.8, 173.1, 172.3, 168.9, 136.7, 129.1, 128.7, 127.0, 60.0, 57.0, 48.8, 41.2, 39.1, 33.2, 31.1, 30.5, 24.5, 22.4, 20.3, 15.6. ESIHRMS (m/z): Calcd for C22H34N4NaO5 [M+Na]+ 457.2427; found 457.2425. |
[ 1217482-47-7 ]
(R)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)(methyl)amino)hexanoic acid
Similarity: 0.93
[ 148983-03-3 ]
(S)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)(methyl)amino)-3-cyclohexylpropanoic acid
Similarity: 0.93
[ 77128-73-5 ]
(S)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)(methyl)amino)-3-phenylpropanoic acid
Similarity: 0.93
Precautionary Statements-General | |
Code | Phrase |
P101 | If medical advice is needed,have product container or label at hand. |
P102 | Keep out of reach of children. |
P103 | Read label before use |
Prevention | |
Code | Phrase |
P201 | Obtain special instructions before use. |
P202 | Do not handle until all safety precautions have been read and understood. |
P210 | Keep away from heat/sparks/open flames/hot surfaces. - No smoking. |
P211 | Do not spray on an open flame or other ignition source. |
P220 | Keep/Store away from clothing/combustible materials. |
P221 | Take any precaution to avoid mixing with combustibles |
P222 | Do not allow contact with air. |
P223 | Keep away from any possible contact with water, because of violent reaction and possible flash fire. |
P230 | Keep wetted |
P231 | Handle under inert gas. |
P232 | Protect from moisture. |
P233 | Keep container tightly closed. |
P234 | Keep only in original container. |
P235 | Keep cool |
P240 | Ground/bond container and receiving equipment. |
P241 | Use explosion-proof electrical/ventilating/lighting/equipment. |
P242 | Use only non-sparking tools. |
P243 | Take precautionary measures against static discharge. |
P244 | Keep reduction valves free from grease and oil. |
P250 | Do not subject to grinding/shock/friction. |
P251 | Pressurized container: Do not pierce or burn, even after use. |
P260 | Do not breathe dust/fume/gas/mist/vapours/spray. |
P261 | Avoid breathing dust/fume/gas/mist/vapours/spray. |
P262 | Do not get in eyes, on skin, or on clothing. |
P263 | Avoid contact during pregnancy/while nursing. |
P264 | Wash hands thoroughly after handling. |
P265 | Wash skin thouroughly after handling. |
P270 | Do not eat, drink or smoke when using this product. |
P271 | Use only outdoors or in a well-ventilated area. |
P272 | Contaminated work clothing should not be allowed out of the workplace. |
P273 | Avoid release to the environment. |
P280 | Wear protective gloves/protective clothing/eye protection/face protection. |
P281 | Use personal protective equipment as required. |
P282 | Wear cold insulating gloves/face shield/eye protection. |
P283 | Wear fire/flame resistant/retardant clothing. |
P284 | Wear respiratory protection. |
P285 | In case of inadequate ventilation wear respiratory protection. |
P231 + P232 | Handle under inert gas. Protect from moisture. |
P235 + P410 | Keep cool. Protect from sunlight. |
Response | |
Code | Phrase |
P301 | IF SWALLOWED: |
P304 | IF INHALED: |
P305 | IF IN EYES: |
P306 | IF ON CLOTHING: |
P307 | IF exposed: |
P308 | IF exposed or concerned: |
P309 | IF exposed or if you feel unwell: |
P310 | Immediately call a POISON CENTER or doctor/physician. |
P311 | Call a POISON CENTER or doctor/physician. |
P312 | Call a POISON CENTER or doctor/physician if you feel unwell. |
P313 | Get medical advice/attention. |
P314 | Get medical advice/attention if you feel unwell. |
P315 | Get immediate medical advice/attention. |
P320 | |
P302 + P352 | IF ON SKIN: wash with plenty of soap and water. |
P321 | |
P322 | |
P330 | Rinse mouth. |
P331 | Do NOT induce vomiting. |
P332 | IF SKIN irritation occurs: |
P333 | If skin irritation or rash occurs: |
P334 | Immerse in cool water/wrap n wet bandages. |
P335 | Brush off loose particles from skin. |
P336 | Thaw frosted parts with lukewarm water. Do not rub affected area. |
P337 | If eye irritation persists: |
P338 | Remove contact lenses, if present and easy to do. Continue rinsing. |
P340 | Remove victim to fresh air and keep at rest in a position comfortable for breathing. |
P341 | If breathing is difficult, remove victim to fresh air and keep at rest in a position comfortable for breathing. |
P342 | If experiencing respiratory symptoms: |
P350 | Gently wash with plenty of soap and water. |
P351 | Rinse cautiously with water for several minutes. |
P352 | Wash with plenty of soap and water. |
P353 | Rinse skin with water/shower. |
P360 | Rinse immediately contaminated clothing and skin with plenty of water before removing clothes. |
P361 | Remove/Take off immediately all contaminated clothing. |
P362 | Take off contaminated clothing and wash before reuse. |
P363 | Wash contaminated clothing before reuse. |
P370 | In case of fire: |
P371 | In case of major fire and large quantities: |
P372 | Explosion risk in case of fire. |
P373 | DO NOT fight fire when fire reaches explosives. |
P374 | Fight fire with normal precautions from a reasonable distance. |
P376 | Stop leak if safe to do so. Oxidising gases (section 2.4) 1 |
P377 | Leaking gas fire: Do not extinguish, unless leak can be stopped safely. |
P378 | |
P380 | Evacuate area. |
P381 | Eliminate all ignition sources if safe to do so. |
P390 | Absorb spillage to prevent material damage. |
P391 | Collect spillage. Hazardous to the aquatic environment |
P301 + P310 | IF SWALLOWED: Immediately call a POISON CENTER or doctor/physician. |
P301 + P312 | IF SWALLOWED: call a POISON CENTER or doctor/physician IF you feel unwell. |
P301 + P330 + P331 | IF SWALLOWED: Rinse mouth. Do NOT induce vomiting. |
P302 + P334 | IF ON SKIN: Immerse in cool water/wrap in wet bandages. |
P302 + P350 | IF ON SKIN: Gently wash with plenty of soap and water. |
P303 + P361 + P353 | IF ON SKIN (or hair): Remove/Take off Immediately all contaminated clothing. Rinse SKIN with water/shower. |
P304 + P312 | IF INHALED: Call a POISON CENTER or doctor/physician if you feel unwell. |
P304 + P340 | IF INHALED: Remove victim to fresh air and Keep at rest in a position comfortable for breathing. |
P304 + P341 | IF INHALED: If breathing is difficult, remove victim to fresh air and keep at rest in a position comfortable for breathing. |
P305 + P351 + P338 | IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses, if present and easy to do. Continue rinsing. |
P306 + P360 | IF ON CLOTHING: Rinse Immediately contaminated CLOTHING and SKIN with plenty of water before removing clothes. |
P307 + P311 | IF exposed: call a POISON CENTER or doctor/physician. |
P308 + P313 | IF exposed or concerned: Get medical advice/attention. |
P309 + P311 | IF exposed or if you feel unwell: call a POISON CENTER or doctor/physician. |
P332 + P313 | IF SKIN irritation occurs: Get medical advice/attention. |
P333 + P313 | IF SKIN irritation or rash occurs: Get medical advice/attention. |
P335 + P334 | Brush off loose particles from skin. Immerse in cool water/wrap in wet bandages. |
P337 + P313 | IF eye irritation persists: Get medical advice/attention. |
P342 + P311 | IF experiencing respiratory symptoms: call a POISON CENTER or doctor/physician. |
P370 + P376 | In case of fire: Stop leak if safe to Do so. |
P370 + P378 | In case of fire: |
P370 + P380 | In case of fire: Evacuate area. |
P370 + P380 + P375 | In case of fire: Evacuate area. Fight fire remotely due to the risk of explosion. |
P371 + P380 + P375 | In case of major fire and large quantities: Evacuate area. Fight fire remotely due to the risk of explosion. |
Storage | |
Code | Phrase |
P401 | |
P402 | Store in a dry place. |
P403 | Store in a well-ventilated place. |
P404 | Store in a closed container. |
P405 | Store locked up. |
P406 | Store in corrosive resistant/ container with a resistant inner liner. |
P407 | Maintain air gap between stacks/pallets. |
P410 | Protect from sunlight. |
P411 | |
P412 | Do not expose to temperatures exceeding 50 oC/ 122 oF. |
P413 | |
P420 | Store away from other materials. |
P422 | |
P402 + P404 | Store in a dry place. Store in a closed container. |
P403 + P233 | Store in a well-ventilated place. Keep container tightly closed. |
P403 + P235 | Store in a well-ventilated place. Keep cool. |
P410 + P403 | Protect from sunlight. Store in a well-ventilated place. |
P410 + P412 | Protect from sunlight. Do not expose to temperatures exceeding 50 oC/122oF. |
P411 + P235 | Keep cool. |
Disposal | |
Code | Phrase |
P501 | Dispose of contents/container to ... |
P502 | Refer to manufacturer/supplier for information on recovery/recycling |
Physical hazards | |
Code | Phrase |
H200 | Unstable explosive |
H201 | Explosive; mass explosion hazard |
H202 | Explosive; severe projection hazard |
H203 | Explosive; fire, blast or projection hazard |
H204 | Fire or projection hazard |
H205 | May mass explode in fire |
H220 | Extremely flammable gas |
H221 | Flammable gas |
H222 | Extremely flammable aerosol |
H223 | Flammable aerosol |
H224 | Extremely flammable liquid and vapour |
H225 | Highly flammable liquid and vapour |
H226 | Flammable liquid and vapour |
H227 | Combustible liquid |
H228 | Flammable solid |
H229 | Pressurized container: may burst if heated |
H230 | May react explosively even in the absence of air |
H231 | May react explosively even in the absence of air at elevated pressure and/or temperature |
H240 | Heating may cause an explosion |
H241 | Heating may cause a fire or explosion |
H242 | Heating may cause a fire |
H250 | Catches fire spontaneously if exposed to air |
H251 | Self-heating; may catch fire |
H252 | Self-heating in large quantities; may catch fire |
H260 | In contact with water releases flammable gases which may ignite spontaneously |
H261 | In contact with water releases flammable gas |
H270 | May cause or intensify fire; oxidizer |
H271 | May cause fire or explosion; strong oxidizer |
H272 | May intensify fire; oxidizer |
H280 | Contains gas under pressure; may explode if heated |
H281 | Contains refrigerated gas; may cause cryogenic burns or injury |
H290 | May be corrosive to metals |
Health hazards | |
Code | Phrase |
H300 | Fatal if swallowed |
H301 | Toxic if swallowed |
H302 | Harmful if swallowed |
H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
Sorry,this product has been discontinued.
Home
* Country/Region
* Quantity Required :
* Cat. No.:
* CAS No :
* Product Name :
* Additional Information :