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Chemical Structure| 135112-28-6 Chemical Structure| 135112-28-6

Structure of Fmoc-Nva-OH
CAS No.: 135112-28-6

Chemical Structure| 135112-28-6

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Synonyms: (S)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)amino)pentanoic acid

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Product Details of [ 135112-28-6 ]

CAS No. :135112-28-6
Formula : C20H21NO4
M.W : 339.39
SMILES Code : CCC[C@@H](C(O)=O)NC(OCC1C2=CC=CC=C2C3=CC=CC=C13)=O
Synonyms :
(S)-2-((((9H-Fluoren-9-yl)methoxy)carbonyl)amino)pentanoic acid
MDL No. :MFCD00155631
InChI Key :JBIJSEUVWWLFGV-SFHVURJKSA-N
Pubchem ID :7016885

Safety of [ 135112-28-6 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 135112-28-6 ] Show Less

Physicochemical Properties

Num. heavy atoms 25
Num. arom. heavy atoms 12
Fraction Csp3 0.3
Num. rotatable bonds 8
Num. H-bond acceptors 4.0
Num. H-bond donors 2.0
Molar Refractivity 94.79
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

75.63 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

2.53
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

3.94
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

3.78
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

2.78
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

3.32
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

3.27

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-4.25
Solubility 0.0189 mg/ml ; 0.0000558 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Moderately soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-5.23
Solubility 0.00201 mg/ml ; 0.00000592 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Moderately soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-5.69
Solubility 0.000696 mg/ml ; 0.00000205 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Moderately soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

Yes
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

Yes
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

Yes
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-5.57 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

0.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.56

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

0.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<2.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

3.75

Application In Synthesis of [ 135112-28-6 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 135112-28-6 ]

[ 135112-28-6 ] Synthesis Path-Downstream   1~24

  • 1
  • [ 98-00-0 ]
  • [ 135112-28-6 ]
  • [ 98-68-0 ]
  • [ 160885-98-3 ]
  • N-(2-furfuryl)-N-(4-methoxybenzenesulfonyl)-L-norvalinyl-L-valinol [ No CAS ]
  • 2
  • [ 636-72-6 ]
  • [ 135112-28-6 ]
  • [ 98-68-0 ]
  • [ 160885-98-3 ]
  • N-(2-thienylmethyl)-N-(4-methoxybenzenesulfonyl)-L-norvalinyl-L-valinol [ No CAS ]
  • 3
  • [ 624-95-3 ]
  • [ 135112-28-6 ]
  • [ 98-68-0 ]
  • [ 160885-98-3 ]
  • N-(3,3-dimethylbutyl)-N-(4-methoxybenzenesulfonyl)-L-norvalinyl-L-valinol [ No CAS ]
  • 4
  • [ 135112-28-6 ]
  • [ 98-68-0 ]
  • [ 160885-98-3 ]
  • [ 100-51-6 ]
  • N-benzyl-N-(4-methoxybenzenesulfonyl)-L-norvalinyl-L-valinol [ No CAS ]
  • 5
  • [ 7409-30-5 ]
  • [ 71989-35-0 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • benzoic anhydride [ No CAS ]
  • Bz-Dab-Nva-Thr-NH-CH2PhNO2 [ No CAS ]
  • 6
  • [ 71989-35-0 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • 3-allyloxycarbonylamino-benzoic acid [ No CAS ]
  • p-nitrobenzoic acid [ No CAS ]
  • Bz(NO2)-Dab-Nva-Thr-(3-aminobenzoyl)-NH2 [ No CAS ]
  • 7
  • [ 135112-28-6 ]
  • [ 98-68-0 ]
  • [ 160885-98-3 ]
  • N-(4-methoxybenzenesulfonyl)-L-norvalinyl-L-valinol [ No CAS ]
  • 8
  • [ 71989-35-0 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • 3-allyloxycarbonylamino-benzoic acid [ No CAS ]
  • benzoic anhydride [ No CAS ]
  • p-nitrobenzylamine [ No CAS ]
  • Bz-Dab-Nva-Thr-(3-aminobenzoyl)-NHCH2PhNO2 [ No CAS ]
  • 9
  • [ 71989-18-9 ]
  • [ 132684-59-4 ]
  • [ 77284-32-3 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • N-(9-fluorenylmethoxycarbonyl)-3-(β-naphthyl)-L-alanine [ No CAS ]
  • [ 1349220-85-4 ]
  • 10
  • [ 35661-39-3 ]
  • [ 71989-31-6 ]
  • [ 71989-33-8 ]
  • [ 35737-15-6 ]
  • [ 73724-45-5 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 132684-60-7 ]
  • [ 161420-87-7 ]
  • [ 158599-00-9 ]
  • (S)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-3-(4-fluorophenyl)propanoic acid [ No CAS ]
  • Fmoc-D-Dab(NH<SUB>2</SUB>)-OH [ No CAS ]
  • cyclo(-((S)-2-aminopentanoyl)-Ser-((S)-2-amino-3-(4-fluorophenyl)propanoyl)-((S)-2,4-diaminobutanoyl)-Orn-(D-2,4-diaminobutanoyl)-((S)-2,4-diaminobutanoyl)-Trp-((S)-2,4-diaminobutanoyl)-((S)-2-amino-3,3-dimethylbutanoyl)-Ala-Ser-(D-Pro)-Pro-) [ No CAS ]
YieldReaction ConditionsOperation in experiment
General procedure: [0798] In a dried flask, 2-chlorotritylchloride resin (polystyrene, 1% crosslinked; loading: 1.4 mmol/g) was swollen in dry CH2C12 for 30 mm (7 ml CH2C12 per g resin). A solution of 0.8 eq of the Fmoc-protected amino acid and 6 eq of DIPEA in dry CH2C12/DMF (4/1) (10 ml per g resin) was added. Afier shaking for 2-4 h at it the resin was filtered off and washed successively with CH2C12, DMF, CH2C12, DMF and CH2C12. Then a solution of dry CH2C12/MeOH/DIPEA (17:2:1) was added (10 ml perg resin).Afier shaking for 3x30 mm the resin was filtered off in a pre-weighed sinter funnel and washed successively with CH2C12, DMF, CH2C12, MeOH, CH2C12, MeOH, CH2C12 (2x) and Et20 (2x). The resin was dried under high vacuum overnight. The final mass of resin was calculated before the qualitative control.[0803] After assembly of the linear peptide, the resin was suspended in 1 ml of 1% TFA in CH2C12 (v/v; 0.14 mmol) for 3 minutes and filtered, and the filtrate was neutralized with 1 ml of 20% DIPEA in CH2C12 (v/v; 1.15 mmol). This procedure was repeated four times to ensure completion of the cleavage. The resin was washed three times with 1 ml of CH2C12. The CH2C12 layers containing product were evaporated to dryness.10804] The fully protected linear peptide was solubilised in8 ml of dry DMF. Then 2 eq. of HA11J and 2. eq. of HOAt in dry DMF (1-2 ml) and 4 eq. of DIPEA in dry DMF (1-2 ml) were added to the peptide, followed by stirring for ca. 16 h. The volatiles were removed by evaporation. The crude cyclic peptide was dissolved in 7 ml of CH2C12 and washed three times with 4.5 ml 10% acetonitrile in water (v/v). The CH2C12 layer was then evaporated to dryness.10805] To fully deprotect the peptide, 7 ml of cleavage cocktail TFADODT/thioanisol/H20 (87.5:2.5:5:5) were added, and the mixture was kept for 2.5-4 hat room tempera- tare until the reaction was completed. The reaction mixture was evaporated close to dryness and the peptide precipitated with 7 ml of cold Et20. The precipitate was washed 3 times with 4 ml of cold Et20.
  • 11
  • [ 35661-39-3 ]
  • [ 35661-38-2 ]
  • [ 77284-32-3 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • [ 112883-41-7 ]
  • C62H84N9O13Pol [ No CAS ]
  • 12
  • [ 35661-38-2 ]
  • [ 77284-32-3 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • [ 112883-41-7 ]
  • C70H99N10O14Pol [ No CAS ]
  • 13
  • [ 77284-32-3 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • [ 112883-41-7 ]
  • C71H102N9O13Pol [ No CAS ]
  • 14
  • [ 35661-39-3 ]
  • [ 35661-38-2 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • C58H76N9O13Pol [ No CAS ]
  • 15
  • [ 35661-39-3 ]
  • [ 35661-38-2 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • C62H83N10O14Pol [ No CAS ]
  • 16
  • [ 35661-38-2 ]
  • [ 77284-32-3 ]
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • C66H91N10O14Pol [ No CAS ]
  • 17
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • [ 135112-27-5 ]
  • [ 144701-24-6 ]
  • C65H90N9O13Pol [ No CAS ]
  • 18
  • [ 71989-31-6 ]
  • [ 135112-28-6 ]
  • [ 143674-78-6 ]
  • [ 170642-27-0 ]
  • [ 144701-24-6 ]
  • C61H83N8O12Pol [ No CAS ]
  • 19
  • [ 123639-61-2 ]
  • [ 64-19-7 ]
  • [ 135112-28-6 ]
  • Fmoc-L-Hyp(Bzl)-OH [ No CAS ]
  • [ 159766-56-0 ]
  • [ 378247-75-7 ]
  • C50H61N7O12 [ No CAS ]
  • 20
  • [ 504-99-4 ]
  • Fmoc-L-Dab(Dde)-OH, DDE = 1-(4,4-dimethyl-2,6-dioxocylohexylidene)ethyl [ No CAS ]
  • [ 71989-35-0 ]
  • [ 35661-60-0 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • [ 688316-86-1 ]
  • C84H146N15O22Pol [ No CAS ]
  • 21
  • [ 929-10-2 ]
  • Fmoc-L-Dab(Dde)-OH, DDE = 1-(4,4-dimethyl-2,6-dioxocylohexylidene)ethyl [ No CAS ]
  • [ 71989-35-0 ]
  • [ 35661-60-0 ]
  • [ 135112-28-6 ]
  • [ 125238-99-5 ]
  • [ 688316-86-1 ]
  • C83H144N15O22Pol [ No CAS ]
  • 22
  • C17H20NO3Pol [ No CAS ]
  • [ 53308-95-5 ]
  • [ 135112-28-6 ]
  • C42H64N5O9Pol [ No CAS ]
  • 23
  • [ 3235-69-6 ]
  • [ 159610-93-2 ]
  • C26H19N2O5Pol [ No CAS ]
  • [ 132684-59-4 ]
  • [ 135112-28-6 ]
  • Mor-Hfe-Ser(Me)-Nva-ACC [ No CAS ]
  • 24
  • [ 3235-69-6 ]
  • [ 159610-93-2 ]
  • [ 35661-60-0 ]
  • C26H19N2O5Pol [ No CAS ]
  • [ 135112-28-6 ]
  • Mor-Nva-Ser(Me)-Leu-ACC [ No CAS ]
 

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